##maf version=1 a score=6816 s mm7.chr15_random 3063 259 + 7075849 GATAAAAAAA----TTCAAGAACTTGTA----CTCAGATTCATGTTTCTGGAGATTTGTTTATTAAGCATACAAGAAACCCCTGTTGAGTGCTACATTGTACTATGTACTG--CAGCTATAAGAAGTTGTATAACATGGCAAGTTTC---ACA-CTTTTAGAAGTTACAAAACATTTTGTTGTTCCTTTTG--------TTTGGAGTACCTGAGAACAAATAACTAGAATTCATACTACCCTCAACACCTTTATTCCTAATTTGCCAATTTTTTTATAACT s bosTau2.chr5 18859116 269 + 76426644 GACAAAAATAATGCTCCAAGAAACTGTAGTCCTTCAAAGTCATGTTTCTGGACATTCATTTAT-------ATAAGAAACACTTGT---GTGTAAACTTGGAA-ATGTGCTATTCAGTTGAAAGTAGTCATACAATATG-CAAGTTACCATACAACTTTCAGGTATTACAAAAAGATATGGTGTCCATTTTTATATCTTCTTTGGGATGTGTGAGAACAGGTAACTAGGATTTAGTCCAACTTCAACTACTTGACTTACCTTTTGCCTATTTTTTTTTAACT a score=12575 s mm7.chr15_random 3964 348 + 7075849 aatgaatcttaaaacaaacaaa--aaGATTATAATAGTCTATGTG-GTTTTACATCATCCTTTTGAGTCAGTTGATTTACCTACTGGCAAGATAATGTATGCTGAACTATGGTAATGCTAAATAGTACAATGGAAAATTAATCCAGAATTAATAAACTGAGTTTCCAATTCCTGAATAGTCTACTGCCTAGTAAAACTTGAGTCTACTTTGTTTTCTGAGGTTCATAGAACCTGCATTTTAATTTCCACAGTTTATGTGTACAGGAATCTTTTCCTTAGGTGGTTTTTTTAGATACCATGCAAACCAGATCATCTATGAGTGTCCT----TTTGGAGGATAAACAGTTGAGACTg s bosTau2.chr5 18859417 343 + 76426644 AAAGGACCTTATAAAAGGCTAATTAAGTTTATAAAAGTATACATGCTTTTTATGCAATCCTTTTGAGGCATTTGGATTACCTGCTAATGAAATAATGT--GTTAAACTGTTGTTATGCTAAATAATACAGTGGCAAATGAACCCAGATTTTATGAACAGAAATTTCACTTCCTAAATAATCTACTGTCTAGTTAAACTTGAGTCTTCTATGGTGTCTGGGGTTA--AATACCTTCATTATAGTCTCA------TATGTTTATTGGAATCTTTTCCTTAAGTCAGTGTTCTGGATGTAATTCGAGTCACAGCAACAC--AGTGTCCTACTGTGTGTATAATAAAATGTTGAGACTG a score=5699 s mm7.chr15_random 4544 266 + 7075849 TCAGTATTTGTACACTTTGTTTACTAACAGCTAAATTCTC-TAGAGTCTGAAAGTTAGTAGCTATTATT-TTTTTTTAGAGAACCTTTTTGCATATAGGCTTTTTTTGTATTATTGTCATAAAAGAATGGGG-ATGTAGAGTTAGAGCCTGTCT-------TAAAATTTTCAGCTTGTTTAAAGCTAAACTAAATTGTACTCAGTACCTGCTTGGCTTAGTTTTAGCTCCTTTCATTTCCTTAGAGATGCGTGTTAGAAACGATTTCTAATTATTT s bosTau2.chr5 18859775 254 + 76426644 TCAGTGTTTGTGCTCTTTGCTTAGCAGCAGCTAAATTATCTTAGAATCTGAAACTTGGTAACCAGAGTTATGTTCTTAGAAGAGAGCTGTGTATA---ATTTTTTTCTTTTCAGTATCATAGGGGCATAGAGCCTATAGAGCT-----CTGTTTGGGTGTCTGAATGTTTTATCTTGTTTGTAGCT-CACTGAAAGACATTCTGTAC--------CTTGATTTCAGCTCTGTTC----CCTTTGTGATGAATGGTTG-GGCAATTTCTAGGTGTTT a score=3646 s mm7.chr15_random 5066 187 + 7075849 GGGATTCTGAAAATTAACTCTGGACAGGAATAAAGAAAGAAGTG-CTGGAACTGCTTGGCTATCCC---------------------ACCAAACCTGTTTTC-----TGTATGAAACTGGTAATATATAATTTTAGA---TTTTTTTTATGTTCCTTGTTGAGTTTATATTTTCAGTTGCTACTAATGCTCTATAG--------------------AACTTTATATGACTCTCTAAT s bosTau2.chr5 18860068 228 + 76426644 GGGTTTCTGAAAATGGATCCTTGAGGGTAACAAAGAAGGAATTATCTTGAAATGCTTGATTTACCCTGTGTATCAATCTGAGTTTCTACCACATCTATTTCTATTGATATATGATGCTGTT----TATATTTTTAGAAAGCTTTTTTGGTAGTCCATTTTGAACTTA-----TCAGTTGATTCTATGGTTCTGTTGCTTTGTAATGTAGAGTGAACAACTTTGTATGGTTTTTAAAT a score=19586 s mm7.chr15_random 7942 531 + 7075849 GGCCTCTAAGGACAACCTTCTAATGCATCTTTGTTTTCTTGTCCTAAGATCCTTTCAGAAAGCATCTCACTTATTCTTGGTAGTATCTTTTAATTTGTATATTC-CTCTC-ATCATTTATTGTTTAGTCCTATAAAGTTCTTACATTTTATCCTGGAAAATAGATCAGGAAAGGAGACAGCAAACT---GTGTCATTCCTAGATACATGGTCTGCTTGTCAGGCCCTAGAGTTACAGATGAGCAGTGAGTTAAATTCACATTGAGTGGCAGCAACATCATTCAAGACTTCATTTTTTTTGTCTCCCTTTGCTTATATGATAGAAATGTGTTGGTTTTTGTTTTT---------------------------------------------CACATAGAAATAATCAGAAGCATTCTTTGTGTGTCACAG---ATGTAGCAGATGGAGAATGAA-GAAATAATTAAAAAGGTG-TGAGTGGAA----TTCTTTAAATGGGGAGAAAGATTATTCTTACTGTTAAGTAATT-------AAATTTTCTTGAAT------GCAGCAATGATAGAAATGACAAGGGATAGTAGAATAACAGGATGATTT s bosTau2.chr5 18863670 596 + 76426644 GGCCCCTA-GGACAGCTCTTTTTTGCATCTTTGTTTTCCTGTTTTGAGATCTCCATTGAGAGCATTTCACTTTTCCTTGGAAATGTTTCTAAATATGTGTATCCTCTCTCTGTTATTTATTGCTTAGTTCTGTAAAATGCTTGAGTTTCATCCTGAAGAATAGATTGAGAAAC-AGACCACAGACTTGAGTGCCATGCCTGGACACGTGATCTACTTGTCAAGCAGTACAGTTACAGATGGGCTGTGAGTTAAATTC-TAGTGAATGACAGCATCATCATTCAAGATTTCACCTTTTGTCTCAGTCTTTG----TACTACAGAAATGTGTTGCTATTTGTTTTTTGAGAAGGCATCAGTTTGACCTTTCATAATTAGAGATTTAAGTATCAAAGAGGAATAAGCAATCGCATTCTTTATGTGCAGCAGTTGATACAGCAGATTGGGAATGAAAGAAATTTTTTAACGGATGCTAACTGGAAATTCTTTTTTAAGTGGGGAGACAGATCATTATTGTAGTTAAATATTTCTAAGAGATATCACTTTGAAGCTAAAAGCAAGAATGATGGAAATGAAAGAAGGCAAGAGACTGAGGGAATGAATT a score=171319 s mm7.chr15_random 8473 3359 + 7075849 AAGTATAACT--AGGCACTTAAGAAAGA----CTTCTTCCTTCCATTGTGATTTCTGTTTTGGTAAACATGGTAAAAATAAAGGCTTACAAATTGGGACGGAAGCAGGAAATCCTAT-TAGTGGCTGCCAG--TTTAACATTCAAGACCAATGGGAA-GCTCACTTCTGTTAGATTTCAATGCTTTTCCTCCCAAAGTCTTCCTtttctttctttctttctttc-----------------tttcttttttttttAATAAGG-----------CACAATTTTGTTTTCATATCAGATTCTTATTAGAGAGTCCAAATTATAATCATCCTCACTTTTTGAAAATCTGAAATTTGTGGCTTGAGGAAAAATGTTCTTAAACTCACTTTCTACTCCCCTATTAC-CATAAAGAACCCTTTCTTTCTTCTGATAATCACTAAAAG---GGGAGAATTTCACC--CAAGTGCTAGAATCAACGTAAAAGAG-AGGACTTCTCCCTTATCCTT------GTGTCCACCT----------------CTACCTTGATAGAAGTAGACCCAGAGGAAACCCTGAAAGCCAAGTTCTGGCCTTGTGAT-ACGTTAGGAAAACAGGCTCTGGAGCT-GGAAGTGGAATTGTCTGCGGTACAGCAGTTGGGAA----TTCCCATAGATGAATGATTTGCTTTTCAGAGACAT-CTGAGTTTTCAGCCTAAATGACCATCatttttatatttatttgcttttatttacttatttttttaaat----------CTGTATTATGGTTTTAGAAAGTACtaaaaataatttatttgttttttttaaatgtatttaaaaCAAACAAACAATCCAGAAAACCTTGTTGTCCTGGGGCTATGTGAGGAAGAATGAAGCTCTCATTTTCC-GGTACCCAATCAGCAGCTTGAGCTGGCCTCTCCTAGGAACAGAATTTATTGAAGCAATTTATCCTGGCTAACTGTGATATAAATCTGTGTATACGTATGTACATACAGAGTCTATTCCATTACAACAGGACTGAAGCATCAGTTTTCTTCATAGTTAGACCATGTTCCTATCACATTGAAAGATGACCAAGCAGCCCCTTCTATTTTATGGGGCACCTCACACTTTTAAACACCGATTAGCTGTGGAATTACTGATTAGACAACCAGAAATACTGGTTTCTAACCTAAAGATAAATCCTAAGAGAATAGGAAGAATATTACCTCGTTGCCCTCTATTTTAAGCATGGTTTT------CTGGCTACTAGATTCATTCTAGCATGTTAACATTTTATTTTAATGCAGGTCTGACTGAGATTGGCCTGACATTTTGGTTTATCTCCAATATAAAA-TTTGAGATTTGGTTACAGTTCTGAGATTGTTTCCAGACATATTCCAACAGA----------------CATCCCTCATTCACATCCTTTTATGAATAGTTCTGTGTTGTGGATGGTTGTATGAAAATGTCCTT--AGCACCTTGTTTTACAAGGCTACTTTCACCTTTCCTCCCAGTTTTCTCTTTGACTT-TTCCAAATAGTGTTTATCTTTTAGGGATATTTTTACTGTGATTTGCATTTCTAATCATTATTCATCTCTGCCT-GGTTTTTATTCTTAATTGGAATATGAGAACTTTTCTC-AATGCGTTCAGATTGCATTTGTTGTT-TTTGACAAAGAATTTTGGGAGACATTTTAAGAGTC-----------ATTTAAAAAGAGCAA---TATAAATTCTGTTAAGTTCTTCAGAGAAATAGAGGGAATGGATGGTGGTGCCTTTAAGTGC-ATTTCTTT-ATCCCCTGCAGCAGTACACATCTGTTGGCTGCAGCAGAGCAGCCTAAGAACTCTGGCCGAGAGCAGCACAAACAGCCGGAACATATTCACCCAGTAAACCCCCAAAGAGTCGACATTTGTTTTATTGCTGCTTTTAAAAACCTAGCCATAAATAGAATCAGAGGGGGGAGGGGCACTGATATTTCTTCATTTGCAACAGACAATTGCTGGGGGGGAGGAGAAGGAGGCTCCCAGTGGGGAGGGGAAGtttttatttttatttttttattaatGAAAATCATTTCCCATGTAGTCCAATAGGATGGGTGCTTTGTTTTCTTTGGCAATAATCTGGGATAAACGACCCTTGCCAACAGTCTCGTAGTTTATACACCAGGGAGCCAGATTATAGCCCTGTAAAATGGAGCACCCCTCCTATAATCCCTTAATTAATTAAATGACAAATTTTGGTCTTCTCTAGTTCAGAAATATGGCTTCCGCATCGAGCGTTCAGTGAATTTATTGACATAGAGAGCTGCACTGGTTGTAATTTAGTAGACTGGAGAAATATGTTATATACTGTAGCAGAAAGAGGGAAAACCCAGCAAA-GGCTTAAAATTCCTTGACTATTTAAGTCTGAATTTTCCTAATTAAAAGTTTCAGTTGAGGCATAGTAGATCATATGCCACCTGTCTAATGGGTCTTACCAAAGTAGCCTGTGTTTACAGCTATGATAGATGGCATTCTTGGAACACCTGTTTCTAGGCTTGATATTTTTGAAGCGTATTTTTTTTT------CTCCAGCGTATTTAACATAACTTTTCCCC-TACT--CCCCTCCCCAGCTCTGCTCTGCTTTATGAAATATGGGAGACGACAGACCGTTTGTGTGCAGTGCCCCGGGCTGTGGACAGGTACGTTTACAATATACTTTATTGTGAATGTCTTGTTGTGAATCAAAGTGGCTGTTTTATCACTAAGGCAAAGAGTTTAAAGCCGGTATTTTACGTGATCACTGGAGGTAATCAGATCACAGGATTTGCAGCGTGTAAATCCAAGTTATGAGGAAGTGTAGGCACTCCACTGTAATGAAATCTGCCTTGCTTTCTTCCATCTTGTTATTCTACTGATGTTTGTTTTCCAACACACAGTATTAAACAATACATGTTACCCTTTCTTCTTTTCTAAAGCTGTCCATCTAAACACAAAGCAAGTTTAGAAATACCTTC---TTGACCTTCATATATATAAAAGTCTGTTTAACATATTTAGAGAGTCAGCTAAGAATGTTCCCATTCATTGTAAGCCTCCAATT-TCATCGTCT-CTGTAGATTTCTCAGATAAGAAAAAGGAATGTTTCTTTTGATTGTTGATTCAGAAAAATCGTGCTAACAGCTAA-----------GTCAGGGACAGACAAACCCAACATAGAACTTGAAATCCAGTGGTATTCTACAAA----------------TATTTCCCATGTCTGATACTGTGACATGGGTTGTTCTGTATGTCAGCTCC----TAATTGTTTGCATGTGTGTC---------CATGCTTCTTTT----------TTATAAAATAATTCTGTTAGAATTGCCTTGTTTTTC----ATTTTATATTTAAC----------TTTTTTCCCCTAGA--TTTTTTTTCTACCTGCTTCTACAAATAATGAGAAAA-------AAATGAATT---------AAAGTTTTATTTGCC-------TTCATTTGATAGAACCTGAA---------CTATAATCAGTT s bosTau2.chr5 18864390 3515 + 76426644 AAGGAGAATTGTAGGTATGTAAAAGAGAGGGTCTTCTTCCTCCCATTGTGGTCTCC-CTTTGGTGAAAATGGCAAA--CAAAAGCCAGCAAAT-GGGAAGGAAGCAGGAAATCCTAGATAGTGACTGTCAAATTTGAGTATTTAAGAGGTGTGAGAATGCTTGCTTCTGTTACATTTTAATGCTTTTCCCCCAAA---CTTATTTTGCCCTTTTCCCCACTTTTAGAAAATCATAGTTTTTCATCTCTATTTTTTAGTAAGGGTGCAATGAAATAAAATTTGAAAACCATAT---ATTGTGATGTGACTGTGCAAA-----ATCA------------AAAATTTTGAATTTTGTGGTTTGAGGAAAACCATTCCAG-----------TACTGTCCCATTCCTCAGCCAAGACCCGTTTTTCCCTCTAA--ATCGGTAGAAAACTGAGAAAACTTAGCCTCCAAA----ACAACCGAGGTAAAAAATTAGGAATCCTGTCTGGTTCTTTATGTTATATCTATTCTAGACCTTGTAGCTTGCTTCCTGGTTAAAAATATGTT-AGAGGATCTTGTTGGAATAAAATTCTCATTTAGTGATTATATTAGGAAAGCAGGTTCTGGGACTAGGAAGTAGAATTATCTCTAGCAGGGCAGTTGTTAGGATTTTTCCGGAGATAA-----TTGCTTTCCAGAAATGTTCTGAGTTTTCAGCCATAGTGGCATTGGTCTTTGCATTTATTTACTGTTATATATTGATATTTGTATTTATTTTTTGCACTATGATGTAGTTATAGAAAGTGCTAAAAAA---TCAT------------GATGTATTTAAAATAAACAAACAAACCAGAAAACCCCCTTGTCCTGGGGCTATGTGA---AGAATAAAGCTCTCATTTTCCCAGTACCCAGTCATCAGCTTGAACTGGCCTCTCCTAGGAACAGAATTTATTGAAGCAATTTATCCTGGCTAAATGTGAGATAAATCTGTGTACACCTATGTACATACAGGCTCTCTTCCATTACAGCAGTGCTGCAGCATCAGTTTCCTTCATAGTTAGACCCTGTTC-TATCACACTGAAGGATTACTAAGAAGCCCTTTCTATTTTATGGG-CATCCCACAATTTTAAACACCGATTAGTTGTGGAATTACTGATCAGACTACCAGAAATACGGGCATCCAACCCCAGAGTGAGTCTTAACAGAGTAGGAGAGATGTTTCCACTCCCATCTGAGTTTTAAGCATGTTTTTAAGTTTCTGATTGTCGGATTCCATCTAGCACTTTAATATTTTATTTTGATGTAGACCTGACTGAGGTTAACCTGACATTTTGGTTTATCTTCAAGATAAAAATTCAAAGTTTGGCTACAGTTCTGAAATCGTTTCTAGGCATATTCAGATTGTAGTTCTTCTCTTTCATCTTCCCTTGTTCTTGTTCTTTCATACAGCTTTCACTCTTGTAGAAGGATGTTTGAAAATGTCCTTTAGGGGTTTTATTTTAAAAGACTATTTTTGT-GACCCTCCCTTTTTTCTGTTTTACTCCTTCAAAATATGGTACATCTTTTAGGGATATTTTTACTATGATTTACATTTCTAATC--TATTCATCTCCACTTCTATTTTTATTCCTAGTTAGGATGTGAGAAATTTCCCCCAACACATACAT-TTGGAATTATTGTTCTTTGACAAAGAATTTTGATCAACATTTCAAGAATTTAGCTTCAATAATTAAAAAACAGCAACAGTATAAACCCTGTTAA-TTCTTCAGAGAAACAGAGAGGATGGATGGTGATGCCTTTTAGTGCCATTTCTTTTATCCCCTGCAGCAGCTCACATCTGTTGGCTGCAACGGAGCAGCCCAAGAACTCTGGCCGAGAGCAGCACAAACAGCCGGAACATATTCACCCAGTAAACCCCCAAAGAGTCGACATTTGTTTTATTGCTGCTTTTAAAAACCTAGCCATAAATAGAATCAG--GGGGGAAGGGCACCGATATTTCTCCATTTGCCACAGATGATTGGTGGGGGG----AGAAGGAGGCTCCCCGTAGGGAGAGAAAGGttttatttttatttttttattaatGAAAATCATTTCCCATGTAGCCCAATAGGATGGGTGCTTTGTTTTCTTTGGCAATAATCTGGGATAAACAGCCCTTGCCAACAGTCTCATAGTTTATACACCAGGGAGCCAGATTATGGCCCTGTAAAATGGAGCACCCCTCCTATAATCCCTTAATTAATTAAATGACAAATTTTGGTCTTCTCTAGTTCAGAAATACGGCTTCCGCATCAAGCGTTCAGTGGATTTATTGACGTAGGGAACTACACTGGTTGTAATTCAGCAGACTGGAGAAGTGTGTTATATACTATAGCAGAAAGAGGGAAAAT--AGCAAAAGGTTTGAAATTCCTTTACTCTTCAGGTCTACATTTTTCTAATTAAAAGTTTCAATTGAGGCACAGTAGATCATATGCCACCTGTCTAATGGGTCTCCCCAAAGTAGCCTGTGTTTACAGCTTTGATAGACAGCATTCTTGGAACACCTGTTTCTGGGCTTGATATTTTTGAAGCACTTTTTTTTTTTTTTAACTCCAGCGTATTTAACATAACTTTTCCCCCTACCTCCCCCTCCTCAGCTCCGCTCTGCTCTATGAAATATGGGAGACGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTGGACAGGTACGTTTACAATATACTTTATTGAGAATGTCTCGTTGTGAATCAAAGTGGCTGTTTTATCACTAAGGCAAAGAGTTTAAAGCCGGTGTTTTACGTGATCACTGGAGGTAATCAGATCAGAGGATTTGCAGTGTGTAAATCCAAGTTATGAGGAAGGGTAGGCACTCTACTGTAATGAAATCTGCCTTGCTCTCTTTCATATTGTTATTCTGCTGGTGTTTGTTTCCCAGTACACTGTGTTTAGGAATACATGTTGCTCTTGCACCCTTTCTAAAGCTGTTTATATAAATACAAAGCAAGTTTAGAAGTATCTTCTTTTTAGCCTTCATGAATATAAAAGTCTATTCAACATATTTGGATAAGTAGCTGAAAATGCACCCATTCATTGTGAACCTCTATTTGGCAGAGCCTATTTTGGATTTTGTAAATAAGAAAAAAATA-GTTTCTTTTGTTTGTTGACCCAGAAACTCATTGTTAGCAGCTAAGGCAAATACCTGTCCAGGAAAGACAAATCCAACACAGAACCCAAGCTCTCACAGCAACATATAAACACAGGATTTCTCAGCCATTTTCCCTGTCTGATGCCGTTAGATG---CCTCCTGTGTGTTAGCTGCCGTGTCATGGTTTATGTGAATATCATTATATATCAAACAGTTTTTCATCATGTACTTTTTAAATAATTTTGTTGAAACTGCCTTTTTTTTTTTCATTTTTTTATTCAATACCTTCTTAACTCTTATTCCTAGACCCTCCCCTTCTGCCATGTTCCATAAAGGATGAAGAAAGGAATACAAAGAAAGTCTTACCAAGAAAGTTTTATTTCCCTCATGAGTTGATTTTCTGGAGCCTGAAGGGTTGAATTTCTGTTCAGTT a score=14167 s mm7.chr15_random 11832 463 + 7075849 AGGAATATATCATGTGACTGTCCAGTGACACTTACTGGTGGTATGTGAGATTGCAGACTGGTTCTATTATGTATTGTAAATACTT------------AAACAAGAAGAGCTAAGTCCTAGACACGTCTAAGAATTGGAAGTTGAGAGGTAGTAGAGATAG--TGATGGTACAAGAAATAG---GAAGAG-GATCCTAGATTTCAATAAGTGCTGAAAATTTCTGATAAGACATTTAAACAAAATCCTTGTTTTCTGCAGGATTCAGGATCCTAAGGTGTAT--------------TTTCTTCCCTGTTAAAAATTTTT----AATATGAATAGATATGTTTCCATTTTCAAA-AGCATTATTAAAGTAGGCATGTTAA-ATGATCCTTTCAAATTTGTATGTATGAAT---TTTATAATGCTGTGTGTTGTGACTCT--------GCAGCTGATACATAGTAATATGCTATGCT------GTTGGAAAAATCTGAATTTTTGGTGAGTTTATTTTCCT s bosTau2.chr5 18868130 513 + 76426644 AGGAATATGTCATGTGACTGTCCAGTGACACTTACAGGTAGTATGTGAGATTGCAGACTAGTTCTATTAAACATTGTAAATACTTTAGAGAAGTATAAAAAGAAAAGAGTTAAGTTCCAGAGATTCCTAAGAATTAGAATATGAGAGCGGGATGGGGTGGATTGATA--ACAAGAAACAGTCAGAAGGGCGATTCCAGATTCCAATAAATGCTAAAAATTTCATAAAAGAC---TAAGAAAACCCAATATACTCTTGAGTATTTATCATTGTAAGGTTTATATAGATATATATAATTTTTTTTCAATAGAAGCCACTTGGAAAATTAGAGTAAATTTGTTTCACTTTTCAGATGGCCTTATTGAAGTACACACCTAAATTTGATTTATCCAAATTTTTGTGTGTGAATTTGTTGGTAATTGTACTTACTGTGACTCCCATGATTGAAACCTGGTACCTTTTTTTTTTCAATACTTCTCTCACTTTAAGAGTCTGCACTTTTGATGAAAAGATTTTTCT a score=11057 s mm7.chr15_random 12874 541 + 7075849 ccctgtctcaaaaaaaGGAAAGTTTTACCATTCATTTTGTACTAGAACAGGAAAGTAGTAGGGACTTTTTACTTTGACTTCTTTAGCAGGAGAGAGAGCTCCAACTTAAAGGTTTGGTGGCAATGTGA------CTTTACCTTTTTTGCATATCAGAGAGTGTTCTTTCAGGTAAGATTGTAGTTCTCCAGTTATATTTAGTCCTTTTTTAGATTTCTTCTGAGATCTGATAACAAATAGCTCCAAAGTATGATTTCAACAGATACA-TGTGATCACCCCATGCCATGTAAAATAGAGAAAGTGTGGGAGAAGATACAAATTTGGTAAAGCCAGCTACCATT------------CTACTTCCTTAAAT--CTTGGGA--GTCTTCATTTTTAGAGCCACCCAGAGGCCTTTGAGT-TACTTGTAATCTGCTTGTTATTGACTCAAA-TTATCTGTTCAAAAGTGGTAGA--AACAAAAAAG-----TAAATCCCAGGA--------AGGAACCGTGTCAGTTTCACCTCTGGAAGGCATGATTTAGGACCTGTTATTGGAGAAGACTCAAAAATCAGTGGT s bosTau2.chr5 18869127 500 + 76426644 ACTTGTTTCATAGAAAAAAAA--------------------------------------------------------------------GATAAAAAGCTGTAACTTAAGGCTTTGG-GGTAGCGTGATTCATCCTTTACCTCCTTTGCATGTCCAAAGCCTTATAATCATGTGAGACTGCAGTTCTTTAGTTATGTTTAGTCTCCTTTCAAGTTTCCCCCAATATCTAGT----AATAACTCTAGAG-AGGTCTCTATAAGATTTACTGTGATTACTTTATGTTATATAAAATAGTGAAAATCTGGCAGAGAAGATAAATTTGGTAAAGTGAACTACCCTTGGCTTGTTGTTCCAGCTTCCTTATATGCCCTGAAAACGGTTTCA-TTCTGGAGCCTCCTTGAGGCCTTCAAGTCTATTTATAATC-GATCATCATTGATTCAAAGTCGTTACTCCAGAAATGGAAGAATAATAAAAAGGTTATATAAGTCCCAGGAGAGGTAATAAGGACCATGGTAATT-----TACGCAAGGCATGTTTACTACTCAGCAACCATAGAAACCTCAAAAATCAGTGGC a score=30284 s mm7.chr15_random 13672 697 + 7075849 caaaaaatttatgcaaggctctgggttcaggcttcagctctgaaaaaaaaaaaaaagaacaaagagaACTAAGGGAATTCAGC-TTTGTTTCTGTATCTAGAC-CTGTGTAGACTCCACCATATGCATCTTTAAACTCAGAAATCTTCCTGTAGTTTAATATTAAGGAACTTTAAAAGGAAAATTTACTTAAAATAGACTAGTAGATTATACCCTCCACTATATAATCAAAACCACCAGGCTTTCAATGGATACATAAACATGTTTTGGTTGCTAGGTTTTTAATGGCTGTTATTTTTGGACTGTGTTCATGATCTACTTCCCAAC----AGTCTGATGTGACACAGCTGAGTTCTAAATACACTGCATGTACTT----AAAAAAAATGGCTACCAAAGGTTGTGCTGTCTGCATTCTTTTGTTAAAACACAGATGATAAGCTTTTT--AGCGCTTTTATTCCTATTTTCCTTTTGAGACTGTTTCTCTTAAGGCCT--------TCATGAAGGAGAACTTGAGAAAAAACAATATCCTTGCTAAAAACTTCTCTATGAAATGTGGTATACGCAGTCATTAATAG--AGTGGAGCTGCCTCCTGAGAATTGGTTAGTTTTGTTAAGGCAACAGTCCCCCAGGTACT--CTTTTGACTGAGGCCTAGGTGAA-TCGAGTTGTATGGGCTTTTGAAGCAATTATTAGGTAGCATCTATTTAAGA s bosTau2.chr5 18869670 671 + 76426644 CAAGAGATCTATGCA-------------------------TAAAGCAAA-----------------ACCTGTAGGAATCTTGTAATTATTTACATATTTGTTCTCTGCCCAGGTTTTACCCTGTATACCCCTAAACTCAGAAATCATCTTACACTTTAATATTAAGGGGAGGTGAAAGGAAAATTCACCTAAAATAGACTAGCGGATTATGCTGTCCACCATATAATCAAAACCACCGGGCCTTCAATGGATACGTAAACATGTTTTGGTTGCTAGGTCTTTAATGGCTGTTATTTTTGGATTCTGTTCATGATCCACTTCCCAACAGTAAGTCTGATGTGACACAGCTGAGTTCTAAATACGCTACATGTACTTTTTAAAAAAAGATGGTTGCTGAAGGTTGTGTTCTTTGCATTCTTATCTGAAAAGACAGGTGATCGGGTTTTCTGAGCTCTCTTATTCCTCTTCTCCTGTAGTCTCTGTTTCCCCTGAGCCCTCATCACCCTCAGGAAGAGGAACTTG-GGGAAAGTAATATCCCTGCTAATATC-TCTGTCTGGAATGTGGTA-------ACAGTAATAGTTAGTAGAACTGCCTTTAGAGAATGGGTTAGTGTTGTTAAGGCAACAGAGCCCCAGATACTACTCTGTGGTAAACGGCTGGTTGAATTTGAGGTGTATGGGTCTTAGAAATGTTTATAAGATAGCATCTATTTAAAA a score=2848 s mm7.chr15_random 15834 67 + 7075849 AAATGGCTTTGCCTTTGTGTTTTGTTAAAATAGTAAAGAATAA---TTGGTGCTGAATCTAGAGAGTCTT s bosTau2.chr5 18870354 67 + 76426644 AAATAGCTTTGCCTCTGTGTT--ATTAAAATAATAG-GAATACAGTTTGATTCTAAATCTAGGAAGTCAT a score=3111 s mm7.chr15_random 16001 77 + 7075849 TGGAAGCAAGTATATATACT----TGTTATTATCAGAAATCCTAAATTTGAGATGTTGCTTCATGTG----CAGTTAGATTGTCT s bosTau2.chr5 18870487 85 + 76426644 TGGAAGCAGGAAAAATTACTACTGTGTCTGTGTCAGTAATCTTGAATTTGAGGTGTTACTTCACGTGGATACGGTTAGATAACCT a score=102694 s mm7.chr15_random 16960 2306 + 7075849 TTCAATTTTTATTACCAAGAAATCAACAGACTCCACACTGCTATGTTATCCTATCAGGAACATA-TGCTGGCTTGCAGAGCAAATTATGCAGCTTTAAATAGAAAATATGGCTATCATCATCAAGTCTTAAAGTAGAAGCTGGTTATATCTGTTTATTATGTAAGTTGTTT-----CTGAAGAACAGGA---CATTTCCTCTGA--AGACAGTATT--------------------TCATTGTTAACCACTGAGAA--GTTTTTGTTGTAACTATGC-TTAACAGTCCTGTCATTTAGAGAAA--------TGATTATTTCTTTGTCCAGTGTGACCCCAGG------TATTTATTCTCA---------------------AGATCTTTTTTTCTCTTAGAGTACA-------------------------CAGACCTCTAGGA-CcttcagttgtatgaaaagtttgaggtcagcctgggttaaatgagacctcatctttaaaaaaaaaaGAGCAACAGCGGCATCCTAGTTGTAGTGGGATTGAGAGCAGCTTCTTGTACCTTCACATCTTGTC--ATAGTAGGAATAATGTTTATGGTGCTGTAGTTCTGGCTTCACTTGGCGTCTAACCAACCTCCAGAGCTGTTTATTGCTTTGTATCCTTTGCCTCCATGAGCATTAGCCCTTAAATCTCTATTGCTCTGTAATACTTGAGGCAACAGATAACTCCTGTGATTGGTTAAATGCT--------ACAAAGGGATGT--TTTATTGTCTATATAACACAAATCTATAGA--TTATTTCTGTTATCCCAGCTTTCCCATTAAAAGGGCCATACTGGTTCTATGGGACTCTGGATCTTTCATTCTGCCCCTTTGGCAAGTTTCCCTAATATCTGTCATGAGCACAAAAGAAAAGCAAAGAAGAATAACTTGATGTTGATTACTCATTCTTTATGTTAGGGGAGCATCATGAATTGAAAAATGACCAGGAGAGAAATGAGTTAGGTAGGCAAATGCT-CTTGTGGTGGTGTATGCATGCTATGTTTGTATGCTAGGACAGGTGAAGGCAATTTTAGACAAACAAATAAGCTTTTCATTCTTACCCCCTGCTAAGATTTTTTTAA--CTCAAAATTTCATTTAATAATTCATATTTTACTCAATAATTCATTTAGTTCCCATCTGGTAGGGGTGACTGCATGCTGTCAGGCAGCTGAAAATATACTACATGATACACAGTTAGGCCAAATGTTAGCCTTATTTTT----GTAAAATGTTGATTTTGCAATAATTTCCAGTCCACTTTTGAGAATTCTGTAGTTGTATGTAACCT-GTGATGGAACTGGTCTACAAGTATGTATT----AACACAGAATTGGGATTAGGTTTAAAAATGCTCAGAGGCGTTAAGGACTAAGAATTAA---CTGGTTTCTTAAAGTCAAATCTGAT-CTCTTGATGCTCTTCCT-AAACACATGTTACTGGGTTATTTTAGCTCTTTGTGTTATAT--ATTGTGCTATTATTAAAAGCATATAATACATTAAA-GCGTCCTTGCTTTAGCCTGTTCCCTCCATCCCCACCAAACAAACAAAAATTAAATGATGCTGTATGAATATAGTTGGAGCTATAATTAGGAAATTAAACTGAAAATTTTTCATTCATTAACTCTTGTTTTTCCT-GCATACAACTGAGTATTTAAAAAGAAATGGGAGTGTTGGAATTTTTGTCAGAGCATTCGTGTTACAAATAAAATAAGATCCTGTATCTTTGTATTTCAATAATTCTTCCTAAGCCTAAA-------CTCCTCCTCACACCCATCTATCTTACTATTTACTTATTTCTTTAATACTTTTTAATCAAACTGATGACTTTATAAAGCGCCT---GGATCTCACAGTCTCTTCTTTCACTTAACTCACTTT-GCCACCATTGCTAAACCACATA----TTGCTAGAGTTTTAACTGGTTGGATGCTATCA---CTGTGTAGAACTCATCATTCTTTAATCAAATAATCTTTCAGCCAATTCAGCATATTAAAAAAGAAAAGCCTGGTGTTCTCGCTCTCTCTAGTTAATGCGTTTCTTTAATGCGTATTGACTTGCTCAGCAGTCACATTCTGTCTGAAGTCCTTGTTAAGGCCT-CTCTGTATGTGGATTCATAACACATCTGTGTGTACATCAACAGTGCGGTATAAATAATAATAAGTAATCACCAGATGGCCTGTAACTGCTCCTCTGGACCCTCTGGGTCTCTTGAAGCTGTTAGTAAAGTCTTCTGGCATTTTGCTGGTGAAAATTTGTCATAGATTTATTTCTAAAAAAATTCAAACTCACAACTGGGTGTTTAGGACTCGATGTTGCTGTCTGTGTTGTAAATATTTAACAGGCTGTGCACAATGGCAAGTAAAG--GCCATTATGTACAGTGCACA s bosTau2.chr5 18870715 2355 + 76426644 TCCGATTTTT-TTACCAAGTG-TCAACAATTTCTATATTCCTATACCTCCCTCTCAGGCACATGGCACTGGTTTGCAGTACAAATTATGCAGATTTAAGTAGCCTTTCCGGTTACCATAATCAAGTCTT------TGAGCTGGTTGTATAAGCTTTTTACTTAGAATGTCTATTTCCTTAAGAACAGGAACACATTTCCTCTGAGAAGATACTATTAATGGACAATTAGTATCATCCCATTATTAGCCATTGAGAAAGGTTTCTATCATAACCACTCAGTATCAATTTTGTCCTTTAAAGGAAAAATGCTTTGATTGTTTCTCTGTCAGTTGTGACCCTGAGGAGCTGTATTTTTTTTCCCCCTTGAGGATATCTACTACCAGATCTTTTCTTCTCCCAGAGAACATTTAGGTACAGGTTGAGATTCTGTTCATATCTTTCTGAGACATGAAATGTATAACTAGCTCATAGACCTCCAGGGCT------TGCTTTCCCTTCCTGAGGCCAAGGGTAGCAGTAGAGCCTTAGTTGTGGTGGGATGGAGGGCTGCTTCTT-TACCTCCTTATCTTGTCGTATAATAGGAATAATGTTTATGGTGCTGTAGTCCTGGCTTCACTTGGCATTTAACCAACCTCCAGTGCTGTTTATTGCTTTGTATCCTCTGCCTCCATGAACATTATCCCTTAAATCTCTATTGCTTTGTAATATATGAGGCAACAAATAGCTTCTATGATTGGTTAAATGCTGGCATGCTACAAAGGTGTGTATTTTATTGCCTATATAACCCACATCTATAGAGATTATTCCTGTTATCCCAGCCCTCCCATTAAGTGGGCCCTACTGGTACTATGGGACTCTGGATTTTTAATTCTGTCCCTTTGGCAAGTTTTCCTATTAACTGGCATTGGCACAAAAGAAAAGCAGGGAAGAATGACT-GGTGCTG-TTACTAATTCTTTATGTTAGAGGAGCATCTTGAATTAGAGAATAATATAGGAAAAAATGGCTCTGGTACATAAATACCATTTGTGGTGATATGTGC----TATCTTTACATGCTTCGACAGGTGAGGACGGTTTCAGGCAAACAAATAAGCCTTTTTTTCTCACCCCCTGCCAAGAGtttaaaaaaattcaaatttttatttaataattCATATTTCATTCAATAATTCATCCAGTTCCCATCTGGTAAGAGTGCCTGCATGCTGTCAGGCTGCTGAAAATACACTGCATTATACACAATTAGGCCAAATGCTAACCTTGTTTTTTGTAATAATATGTTGATTTTGCAGTAACTTTCAGTCCACTCT-GAGAATGCTGCAGTTTTATGTAATCTTGTAATAGAAGTAGACCACTGTTATACATAGTAAAGAAGAAAACTGGGACTGGGATGAAAAAAATGTAGACATGTTAAGAGCAAGAAATTAAACCCTAGTTTTTTCATGTCAGATCTGGCACTCTTGACACTTGCCCTTAGAAACAAGTGGTTGG-TTATTTTAGTTTTTTGTGTTGTATTTGTTATTATGTTACTAAGAGCATA--GTAGGTTAAAAGCATCCCTGTTCCAGTGTG---------------CCAAAAAGAGAGAC---------TGTTGTATGAACCTAATTGGAGCTATATTCAAGAAATTAAGGTGAAAATTTT-CAGTTACTCACTCTTGTTTTTCCTTGGATATGACTTAATATTT-----GGAATGGGAGCCCAGAAACTGTTCTCTGAATATTCCTGGTGGAAA------AAAATCCTCTATCTTTGCATCTCAGT---TCATCCGTAGTCAGGAGAAGGGGCTCTTTCCTAGTCCCTTCT-------------------------------TTTA--CAAACTGCTGAGTTTATATACTGCCTTCTAGATCGGAGAGCCT-GTCTTTCATTCATCCCTCTTTTGCCACCCCTGCAAAACCACATACGTATTGCTAGGCTGTTAACTTACAAGATATTGTCAGCATTATATAGAATTCTTCATTCTTTTATCAAATACCCCTCCAGCTAATGAGGCAGATTGAA---GAACAGTC-AGTGTGCTCCCTCTGTCTGGTTAGCATGTTTCTTTAATGCAGATTGACTTGCTCAGCAGTTGCATTTTGTCTGAAACCCTTGTTAAGGCCTACCCGGTATGTGGATTCATAACACATCTGTGTGTACATCTACAGTGCTGTATAAATAATAATAAGTAATCACCAGATGGCCTATAACTGCTCCTCTGGACCCGCTGGGTCTCTTGAAGCTGTTAGGAGAGTCTTCTGGCGTTTTGCTGGAGAAAACTTGTCATAGATTTATTTCTAAAAAAATTCAAACTCACAACTGGGTGTTTAGGACTAGCTATTGCTGTCTGTGTTGTAAATATTTAACAGGCTTTGTACAATGACAAGTAAAAGCGCCATTACTAACCACGCACA a score=51702 s mm7.chr15_random 19676 1701 + 7075849 TTATTTTTGTTC--TCATTTCATAAATTTTTATGGAAAGGGTTTGTATTTTGTTGGGGGAAATTCTGTCCTGTTTTTTCATAGCATTTCACTCTTACTGGTCCCTTTGCTTCTGTACCTGTTACAGGACTCAGCACAGTTATGCACATTTACGAAA--TAAAATGGGCTTCATTACTACT--ACGTTTATGGTTCCCTTTTTCTTTGTTTGCTATAG------ATAATCAAAACATTTTTCACCAAAAATTGAGTATCTTCC--CTTTCAAGCCTCATTTTCTTTCCTCTTTTAATTGTTGAATCTGTTTAACCAACGAGGTATACTGTCCTTTAAACTGTAGCACGTGGCTCTTATTTTTTTAGTAAGGATGTTTGAAGGAAAGCTTTTCTTTT---GAATTCTCATCCTGAAGAGATG--ATACAAACTATGAGGGAAAA-------TGTTAATACCTTATTTTAATGACATTTTGCCTTTTAATTTT---CTCAAAATTATCATGTTTATAGATAAGATTTTAAGAAGGGGGATGAGATTTTAAGAAGGGAAATACCATGAGGGAAA-----AGATTTGAGA--CAATATCTTTGTGGTTTGCTTTTGAAATTTCTTTGTACAACAAAATTTGCTATTTAAGATAGCATCTAAGATGCATGGGTAAGAATCTGGATTTCTAGCGA---TCGTGTG-AAGTACAGACAGAATGAGAATGAGCTTTGTGAAATTAGCTCGTTTCCAGTCTGGCATCTCCATGTGCTTTGTGTGGCTGCTGACTCTGCGGGCAGATTGAAGTACTGAACCAACTTCTGTTCTAAATGTTCAAATTGCCAGCCACCATTCTGGCTTTTAAA---TCTTGTTCACATCCATGATGCCAGATTTTGAGCGAGCATAG--CTGTCTTTTACATCCCAGACAGAATTTGTAATTCCCTGTAATTTAAGGAAAGAGTTTTTCC-TTTTTACCTTTGAAAATCTCCGAGTGGCACT-------------GCAGAATAAATCT--AGCCTTGCTTTGTCCTTTGCGTCATTGTAGAAAGCTAAGCACTCCATTTGGTATTCAGCAGATTGGCAGTCAGAATTGCAGCTCTGCTTATGAAAGACGCAGTGTCTTGAAGAGCCATGAATACTGTTCTAGAAAAAATTTGTCCTGGGGCAAAAGAAACAGCTC-CTTATCTTCCCGAGGGCCAAA---TCTTTTGATACTAAGCAATTATCCCTTGACTTTCCTGAAAAAATAGCTCAATCTACCATAGAGATTGGCACCAGCACA------------AATTACAGTGCCAAG--CTGATTCCTTAGCCACATGGAAAGGCATTGGTG--------------ATGCCAAAGGCTTAATGGTGGTGATTGTTCTGCTGAGGATCTGTGTC--CCGTGTAAGCCT--CTTGGCTTTTCTACCTCTGAGGGAGATAGCTTTTGAT------GTTTACCCACCAATCACCATAAGACTTCATTGTGAAAGGGCCAGTGTCACATCCTCCTTTCTTCAAGTTTCCCTCC------------TTGTCCTCTGTGGGTTGAGAACAAGCTATAGTTTTTCTTTTCCTTTCTTCTCATCTCTTCTATGtccttctttcttttctttctttctttctttctttctttctttctttctttctttctttctttttttttttttttttttGCATTCTTCTTATCGTGGTTCTTATTAGCCCCTGTCCTGGGTGAACATTACTAAACAGTGTTTCCTTTTTTT-----AAATTAATAGACTTTA-TTTTTTAGAGCATTTTTGTAT s bosTau2.chr5 18873287 1621 + 76426644 TTATTCTGGTTTAGCCTGCTTATAATTTTCTAT--------TCTATATCTTGTC------ATTACTAGTCTCCTTCCTC-CAGTATCT-----GTTCTAGGGTCCTTGCT--------------------CAGTACAATAATGCATGTTTTTGAAAACCAAAATAAAACTAATTACCTCTAAACATTAATGTTT---TTAACCTTGTCTTACCATAAGGTAACATAAAAAAGGTTTTTTTT-----AAATTGGGTATCTTTTAACTCTTCAGCTTAATTTTCTTTT----------------GTCTATTTAACCACAGAGGGA---AGTCCTATAAATTATCACACGTGGCTGTTA-CATCCCAGTTAGGATAT---ATAGAAAGCTTTTCTCTTTTAAAAATCTCATCTCGAAGAAGTGACATACAAATTGTGAGTGAGAAATGCTGCTATCAATAGTTTATTGTAGATAGATTTTGCTTTTTAAGTCTTCACATAAAATTATCAGGTTAA---------------------GGAAAGGATTTCAAGAAGGAAAGCATCATGGAGAAAAGATGGAAGTTTGGGGATTTATCTCTTAGTGTTTTTACTTTCAAGTTTATTTGTGCAGTGAAACATGCTACCTAAGATTG---------TGCTTTGGTAAGAATCTGGACTATTTGCAATTGTCATGTGAAAGTACAGAGGGAATGAGAATGAACTTTGTGAAATTAGCCCATTCCCAGTCTGGCA-CGCCATGTGCCCTGTGTGGCTGCCGATTCTGCTGGCAGATTGAAGAGCTGAACCAACTTCTGCTCTAAAGACTAAAATTGCCAGCCATCATTCCAGCTTTTAAATCTTCTTGTTCCCATTAATGATGTCAGAATTGGGACACACCTGGTCCTGTC-TTTAGATCCCAGGTGAAATTTGCAATTCCTTGGATTGGAAGGAGAGAGTTCTTCCTTTTTTGCCTTTGAAAAACT-TAAGGAGCTCTGCAAGGAAAGTCAGCAGAATAAATGTGCAGCTTTGCTGTGTCCTTTGAGTCATTGTAGAAAGCTGAGTACTCTGTTCGGCATTCAGCAGATTGGCTGTCAGTGTTGCAGCTCTGCTTATCAAATACATAATCTCTCTGAGAGCCGTTTATGTTATTCCGGAGAGAA-TCATCCAATGGCAAAAGGAACACCTCTTTTCTCCTCCCAAGGGTCAGATCCTCTTTCTATACTGGTCAATTACCCCTTGATTTTTCCTGAAAAATACCTCAAGCTACTATAAAGATTGGCACCAGCACAGGCTGCAGACTCAGTTACAGTGACGAGCTCTGATTTCTTAGCCACAGGGAGAGACATCAGGGTGACACTCATAAGTATGCCAGAGGCTTAATGGTGGTGGTTTTTCTGCTGAGTATCTCAGTCCTCTGTATAAGCTTGGCTTCTCTTCTCTCTCTCTGAGGGAGATAACATTTGCTTTAGTGTTTTGCACACCAGTCACTATGAAAGTGC----TGCAAGAGT---TGTC----------TTTCTCAAGTCTCTTCCTTGTCTTTAGTTATTGTCCTCTCCAGTTTGAAATCAAGC---------------CCTATAGTCTTAATTTTTTTATG-----------------------------------------------TTTTTGCCTTCCTCTTT-----------------TACTGCTTATCTTGGCTCTTATTAGCCATTGTACCTGACAGGGATTATTAACCAATGTTTCCTCTAATTAAGaaaaataaataggctttatttttttagagcagttttatat a score=7438 s mm7.chr15_random 24370 411 + 7075849 acactttgatc-agacctatgacctctaggactgtgagataataaaacactgttgtttaaaccatctaggtcatctgtcaagctttgtgaaggcaactcaagcaaaAAGACAGGGGAGCTTGTATCAACCTACCACACCACAGTTGGAATCTGGCATTTGCTATAGTGAATGGTTACCCAGAAGCAATGACTAGGGCTTCCAAA---CCATTTAGTTCTCTCTGGTTTTCCTCAATGTGTTTAATAATGTTAGTATTTATAGTTTTTCTTGT-TCTTCCCCTGACAGATGAG------------ACTCGGGTAATAATGTCAATGAGATCCAGTTAACACTTCCTGGTTTGTCTACATTTCAGTATGATAGGATGAGAAGTTCTACATAATTGAAACAATTTGGTATTATTTTAGATCATAGTCAGAA s bosTau2.chr5 18891394 368 + 76426644 acatcttgatttcaaactctggcctccagaattatgagacaataaa---ttgttatttacgcccgcagg----tttgtggtactttgt-----caactctagtgagctagtatgggagccactattggcctaccaTG--------------------TTGCGGTAGTGGTTTGTTGCCAAAAAGTGGAAACTAGGAGTACCGGAGTCTTATTAACTCCTCCCTGACACCCATTGGTATGT--AATGGCTTTTATATTTATCCTTTCTCTCCTATCTTCCCCTAACTGATGAATGGACATGCTATAATGGGATATGATGGTTAAGAGGATCCCGTTACCACC-------------------------GAATGGATG-GAGGTTCTATGTAATTGGAGCAATTTGTTATCATTTTAAACCACAATCAAAA a score=4001 s mm7.chr15_random 26690 103 + 7075849 TTAAACACAAAAATA-ATCAGATTAGTATGTCAATAAATAAAAGTAACAGGTTTCTTCCCCCATGTAATTAAAGTGGCAAAGGAGAATAACACCACCATACTTG s bosTau2.chr5 18892601 98 + 76426644 TTAGACACAAAAATATATCAGCCAAGTATGTCAACAAATTGGGGTAAGAAGTTT-TTGCTGCATTAAATTAAGGTGGCAAGGCAGAAT-----CAGTATACCTG a score=4438 s mm7.chr15_random 26796 114 + 7075849 TTTATTTGAAAATCTGCCAAACAATTTGAGCCCCTTTTTCTTTGACTTTTTTTTTTTTAACTAACCTACAACAACTACTGTGGTTACTGAATCTCTGGACACTTAAGCTCTtat s bosTau2.chr5 18893182 108 + 76426644 TTTATTCTAGAGGCTGCCAAACCATTTGAGTC--TTTGTCTTTGCCCATTTCTTT----ATCAGCCTGTAACCTCTTCTGTGGTTGCTAAGGCTCAGGGCACTTAAGATTTGAT a score=8194 s mm7.chr15_random 28804 339 + 7075849 TGTGTTTTGAAGATATGTTCACAGTTTTGTTTTCCATAGTGAGGTTTTCAGCAGCTTAGGCTAAG--CACAGTATACTAGATTTTCCAAGCTTTAATGTTAAAA-----------TAGCACTTTATCTTTGTCCTTTCCACCCATTTGT-TAGATACTGGGA--------------------TTTACTGTGTGACAAATTAAAAAATGAAATACTTGTTGGCTTTTCTGAGGACTGTGGACCTTATAACATCCTAACAAAAAGTTGGCATTAGAAA--AGATTGAAAA---TAAGATGAATAATGTCAGTAAGAACTTTTAAAG------TATTATTATTTTGATCTTCAAAAAAAAAAAAAAAAGCTTTCCTTGGTTTGTTAA s bosTau2.chr5 18894363 360 + 76426644 tGTGTTT---AGATGTGTTAGAGTATTCTTTTTCCATAATGAAATTTTTTGCACCCCAAGAGAAAAACACAGTGTAGTAGATTTTCCTAACTTTAATGGTTAAGGTCCACACTGTTCACACTGCATGTTTGTCCTT-CCACCCATATGTGTGAGTCCCAGGAATGACAACATTTTTTTTTTTTTTACTGTGTAGGAAATTTAAAAATAAAAGTATT--TGATTTTTTTTAAGAGT-------TCATAATATCCTAGTAAGAATTTGGGAAGAGAAATGAGATTGAAAAATATAAGCTTG-TAATATCAGTAAGAATGTAATAGGACTGTGTGGTAATCATTTGACCC----------AAAAAGAAGCTTTCCTTGCTTGGTTAA a score=10271 s mm7.chr15_random 29352 243 + 7075849 GAACTAAAGCTATCTTCTTGGATGACTCTACTGGTATCCCAACTAAGTGGCTGCATCTGGGAAGTAGAATGT------GTCTATCATGAGGCA-TAGC-----------------ACCATGTAAATGACACATGACCAGGTTCTACTGAAT-----ATGGGGTTTCTCCACTCCTAGGAACTGGTCTTTTAAAGTTAGTTGAACATTTAATCCATTCCTCTATAAAACTACTATCTAAGAATAGATAATATATCTGTCTTTATTAATTTTTT s bosTau2.chr5 18894723 267 + 76426644 GAACTAAAGCTGT-TCCTTAGGGAGCTTTAATGGTACCCCAACTAAGTGGCTACATCTGGAAAGTAAAATACTAAAAGGTCTACCATTAGGCAAGAGCTATGGAGAAAGCAATTAACCATGTAACTGACACAGGACTCAGCCCTGCTGAATTGTCCCTGGGATTTCTGTGCTCTTAGACACTGGTCCTTTAAAGTTTGTTGAGCATTTAATCTA----TCCAAGTAGCTGCCATCTAAAGAAAGATAATGGATCTACTGTTGTTAAATCCTT a score=2402 s mm7.chr15_random 29790 39 + 7075849 GCATAGTTCCCAAGAGGGCTCCAGAGCTTAATAAAGAGC s bosTau2.chr5 18894991 39 + 76426644 GCATAGTTCCCAAGAGTATCCTGGTGTTTAATGAAGAGC a score=2822 s mm7.chr15_random 29969 72 + 7075849 ATTAGATAATAAGAGAGAGGAGTAGCCAAGAATAAGAGAAAGAGGGCTCTAATTTAAAActccatctttcag s bosTau2.chr5 18895035 72 + 76426644 ATTAAGTATTGAGGAAGAGGAGCAGCCAGGAATAAGAAAAGATGTGGTTCAGACTCAGCCTCCATACCTTAG a score=15118 s mm7.chr15_random 30827 441 + 7075849 ATCTGTAACTGCCTCAGTTTCATGAGCAACATCATCAGGTGTTTTTCTTTTTTCCACCATTTTGTTCTTTCCCAAAGTCTAAACAGTTCATAGCCATTGTTCCCAAGGAACTTTG-AGGTCATAAGTGATAATGAGATGG-----TGTCTTTGGTATGCTGTACAGATGTGAAAATCTT-TTTTCCATTAGTGTGACGTTGATA---CTCATGAAGATGTAAAATTATATACTTTCTGGCATATCTCATTTCCTAGCTTCTTAAATAGAAAATGAAGAAGACTCTGTACATCCTGGGAATTACCTTGTATTGGTTAGGGATTATTTTACCTACAATAACTACTTAATAATAGCTTAAAATTGTGTGAATGTTTATAACACAGTAAATCCAGAAAAAGGAGTTTGAGCAGCTAAGCAAG--TATCAAGGATTTACATTCTTTCC-CCTCTCTGCT s bosTau2.chr5 18895109 442 + 76426644 ATCTTCAACTGCTTCAGTTTCAAGAGCAGCATCATAGGTAGCTTCACTCTT----ACTGTTTTGTTCCTTCCCAAAGCCCAGACAATGTGTAGCCATTGTTTTTAAGGAGCCCGGGAGGCTATAGCTGATGATGAGATAGAATAATTTATTTGGTATACTGTGTGAAAGTGAAAATGGAATTCTGCAGTAGAGTACAATTGATAATATTCTTGAAGACATAGAGCAAGATATTTTAGTGCATATTCCATATCCACGTTCCTTAAATAGAAAATGAGGAAAAATC--TATATTCTGAAAACCATTATGTATGGGTTAGGAATGGTTTCAGTTGC--TGA-TACCTAACAGTAACTTAAAACTTTATAAATACATGTAACACAAGAAGTTCTAAGAATTAAGGTGGAGCAGTTAAGCAAGGTTGTTGAAGAC---AGCTCTTTCTGCCTCTCTGCT a score=5751 s mm7.chr15_random 90896 390 + 7075849 GATTCTGAATCTTAAGAAAA--GAGAAACTTCTCTTTTGAAATTAAAAAGAAATCATTTTTTCCCTTGCTTTGGTGTATAC--CTTAAAAG----TCCTCtataaaatattcattaatttatttttattGTCCTCCTTGTAATTGGAGCAATATAGAAATGAGATACAAAGAAGAGCTCAGAATGACCTAGCAATTCTGAACAATAAATAATTTGG--GATA-AACTGGCCTTTGCTGGAACAGAATGtgccctttgggaatctgac------------------------atcag--agaCAAAGA-----------------GGTCTACAA------CTGCTGCAGAA--TGGAGCATTGCCTATGGGATGAATAAGAAGCACAATGGTTGTGTTGACACAGTGAAGCA--ATTTAGACTACCATTCATTATTTAGAGAGTAAAATAGATAA s bosTau2.scaffold5718 4284 447 - 51516 GAGTCTGAATCTCAAAGAAACTTAACAGCCTTTTTGTAGAATTTAATGGAAATTTATTTTGACC--TGCTCCAAGGTATGCTACTTAAAAAAAAATCCTCTGCTATACACTTTGTAATTTTTTCTCCT----CTCCTCATAACTGGAGCTGTGTGAAATTCATTTTTGCAGACAGGCTGAGAACAGCCCTGCAGCTCTGCCAGATGAACAGCATGGTAGATACAGCTGCTCATCATCAGGGCAGGACTTGCTCTTTGGGAAACTGGCTGGGCTCAGCTAGGGTAAGAAAATATCAGGCAGGCAGATATTAGCTCTGTGTTAAATGGTAAACAGTGTAACCAATTGAAGGAAGTAGAATATTAGCTCTGGAGTGAATGGAAAGAACAATGGTTGAGTTGATCTTTTGGGGAAAGATTTAGATTCTCCTATGGCA-TTAGAGATGAAAAGAGGGAA a score=23702 s mm7.chr15_random 96609 763 + 7075849 AAAAACAATGCTTAGTTTTATGATCTGATCAAGAAGAAAGATATTTTTACTTGACCATACATTCAAGGTTAAAAAA---ACAGATTTCAAAATAAAATACATCAAAGGCAAACAAAAATAGGTCTTGGATGCTGCCATGAATCTCCTCTTCATATGATCCCTCCATATTAAATTCTTTTTCTTGTACTCCATGTAGGTATTTGCTCCTTTATTTACCCATAATCCAGGCCTGACCACTCTGTTTTCCTAATGCCATTTGTTTAGGTCAGTAATGTAAAGATTCCTCAGGGGCAAA---CGTCAATGTATGTTGCTAGAAAAGCAAAAACAACATGCAGAGTAAATATCAGCAGAAATAATAAGATTAGGAAAAGTCAATAAGAGATGCTGAGATAGCAAAGCCACATTTAGAGATTAGATGCCCC-GAGGAAGCAAAGCAAACAGCCATAAATATGGATGCTAGCGATAAGCAGCAGGAGGTCAAGTGGGATAAAACACCAGGGTGGTGCTAAC------TCTTCACCCTGTCCTAGGAAACAGGAAACACAAGGTTGACTCAAAGTTTCTGA------TACATTTTATTTCT--AATTCTGATGCATGCCTTCTTCCCATTTAAAAGAATAAAGAAGAAAACAAACCAAACACACAGAGATTGTAAATGTCAGCTATCCTATTAGATAACAAATCCATGTGAAGTTTATAATTCATCTCCAATAAAGG-CAGATCATATAAAGCTCTATATTAGGGAAGATGTGT-----TAGTGGTGTGCTTCTTTTC s bosTau2.scaffold5718 9616 760 - 51516 AAAAGTAAGG--TAGATTTCTAATTTGTT-----ATGAAAATTTTATTTATTGATTCTCC--TTAAGGTTGAAGCAGGCATCTTTTTAAAAACAAAATTTATTAAAT-CAAACCAAAATGGATCTTGATCTTAGCAGTGAATACTGTATTTAGATGCTGGCCACAGTTTAAATT-TTCATGGCACCCTCCCTGCAGATGCTGGTTCTTTTGTTCAACCAGGATCTAGGCATGACCACTTTTCTTCCCTAATTTCATTTGTT-AGGTTGGTAATGTAAAGATTCCTCCAGGGTGAATCACATCAGTGTATAGTCCTGGGAAAGCAAAAATGACATGCAGAGTAAATATCAGCCGAAATAATAAGATTAGGAAAAGTCAATAAGAGATGCTGAGATAG-GAGTCCGTATTTAGAGATTAGATGCCCCTGAGGTAGCAGTGCAAGCAGACATAAATATGGATGTAAATGTTGGGCAGAGGAAGGTCAAAGTGGATAAAAGATCCATGTGATACTCACTGTTCTTCTACCCCTTACACCAAGAAACATG--ATACAAAGTTGACTGTAAGTTTCTGAGGGTTTTTTGTTTTGTTTTTTAACTTCTGACCCATAACAACTTCATTCTTCACAGAATAA--AAATAAACATAATAAATGTTTATA------AAAAGTCATCTGTCATGTCAGACAAAGAACACTGGCAAAGTGTAGTGTATATCAATAATAAAAGCCAGATAACATAAAT-------TTAAGTAAATTGTGGGTTCATGCTAATATGCTTTCTTTC a score=4092 s mm7.chr15_random 99596 208 + 7075849 AAAAATCTTTCAGAAAACCTGACTTTATCAGTGATA-----TGGATTATGAATTGCAATCAGAACCATCTTGAACTTTTCTTGTTTCTCTTGAGTCATACACTCAGTGGCCACAGGGAATCTCTAATATTGCTTCTCTAAGTGCTCATGCATAGACAACTGCAGAGACATTAAACACACATTAACAATTATATTGACTTTA-GTAATCAGTGGC s bosTau2.scaffold5718 14141 213 - 51516 AAAAATCTGTTAGAGGTTTCCACATCATCTGAGGGAAAGAATTGATTATGAATTAGTGTCAGAACATTTCTGAACTCTCCT-GTCCTTCTGGAAACACACATCCATGTGTCTTGGTAAATGACTTCTACCAATTTTCTCAGAGATAACTTTTGGAGGAGTCTGAAGATATGAAACACACGTGAAAGATTCCATTGATCTTGTATAAGCAAAGGC a score=6407 s mm7.chr15_random 122527 599 + 7075849 TTTTTCA---ATTATTATTTCACAAAATATGACGGCATAAAGTATTGAAT-AAATTAATTAATTCCATTAATGGTTTTATCAGAGACTTCCATTATTAATATACCATAATATTTTATTA-CTGCTAATGGTTTTCATTGATTTTAAAACATCTTCTTGCAAAA----GATTTTACCTAATCAAAAGTTGCCATA-CAATTGGAGTTTCAGC--------------TTTCACATCTTACTGAGTTATACTCaatatatatatatatatttaaaGCTGTTGGGCCTTTACCTATTCAAACCTGCACTAGCCTAAATTAAGACATAACTACTGTTAATTGGTACTCTACAATATGCTTTTATACTTTCTCTAAATT--GTGTTCTACAGGTCTA--CATAGCATATAATTACTTAAATTAACAAAACATGTATGGAAGGTAAA-------------------------------------------------------------GGTTTTTTTTTTATTATCATGAAACTTATCATGATTTAAAG----------------------------------------TACTGTGTAGCCTTCTAATATTC------------TACAGATTTGCA-------------CCTTGTCAACTGTGACAGGAATATAGTAATGG----------CATATGCATACA---TGGCTATC----TTTTAAAGCATTT-AAAAGTTAACCCAA------------------CTTGTTACGACATG-----------TCTCTGGAATTTACTGAT s bosTau2.scaffold5718 38793 774 - 51516 TTTTTCATGAATTAGTATTTTATCAAAAGCCATGTAAGGAGATGTTGAGTTAAACT--TTTCTTTTATTAACATTCATATCACAGACT-CTGTTATTAATATA--------TTTTATTAACCGTTAAAGGTTT--ACTGACTCTGTCAACACTCGGAGAAAAAAAATGACTTTATATAATCATCAGTTACTATAACATTTGGACTTTCAGCAGTAATTCTCTTGCTTTCAAGTTTTGCTGAGCTA----CAGAAAAAAAGCCCATAATTAAGAC-ACTGTGGTTTTCCTTGTTCAAATCACCACTCAGCTTAATTAAGATACTGCTAGTGTTAATTGATATCCTAAAATATGCTTTTATAACTTTGCTCAGTTTAAGTTTCTACTGATTTATGCATCACACACAATTACTTAAATAGAGATAACATGTTTGGAGAGTAAGTTTCTTAGGAATACAAAGCTGTCATATTCAAACAACCAATGTTTAAGAAGTCATTCATTTTGGCTATTTTGATAGTATCAC-AAATGTCTCAGGATATAATGGAGGGATGGGAAAAGACAAGAAAGGAACACACCGGAATTTTCCCGTGTTTCATTTTTAAACTTGAGAGCCAACTGGACAGATTTGGAGGGAGAAGTAGGGGATTGTGAATTGCAACA-------AGTAATTGTACTTTTCCTCAGCTTCGTACAGCCTGGATATTCTGGTTCTGGAGCACTTGAAGAGCCAGTTTAAAACAGTCTCTGCTAAGCTCTCATCAAAACATATGTAAACACTTTCTCTGCCACTCACTAAT a score=17727 s mm7.chr15_random 123126 724 + 7075849 GTGTGTGTCC------TTTGGATCCAACTTCCAGTTTTCCATACTCACTTAAGTTTTCCAAATAGCCTAGATAATCCTCAACTTTCCTTGGCTTGGTATACAGGTAGGGAATTTGATA----TCCAGAATACCTATTCTTTAATTCTTTGATATATTTTGAGCTTTATGCTAAAAATGTTAAGAAA-TAGTATTATTATCCTTCATATGTCTTTTTAGGTTT--TTAA--ATGACAAGGGGCATATTTTCTATTAAGATATTT-TCTCACCAACATAACTCCTCTC--TTAAAATAGTGAAATAAAACCTGATTTGCTTATAAATTGAGTACAGTCTTCACTGAAAAGCTGAGATTAGCTATGATATACAAG---AATGTTTCATAAAGAC-AGACAGATAAGCTAGAACTTAATTACATACCT------AAACCACAATCCCAAAAGACAGCCAAATAGTCTTACTGATGGTTTCTTTGAATAATTGATTTTACTGTGCTCTATTAATAGAGAAAAAATGGATCCAAAGGATCCAGCATGTTTTTTTCTTTAATAAACAAGAACAAAAGTC-AAGAGTTTTCTGTAAGGTAAGTACTTAGTAGTCTTATCAACCCATTGCATATTTCAAACATATTTTTTTCCTT-----------------TACATTTTCCCAACCACCTCATGAATAAAGTTAAACCTTAACCATTTTGTTCAGTATGGAGTTGTTTTTGTTCCATAAAAATTGTCTCATCTGAAATTATTAATTTT s bosTau2.scaffold5718 39739 755 - 51516 GTGTGTGTGCATGGAGTGTATATACAACTTTGAGTTTTCTATAATCTCTTATCTTTTCCAAACAATCCAAATAATGTTAACTTCTCTCTAGTTTGAGAGGTAGGATGATAATCTGATAACACTCTGAAATTCTTATTCTTCAACTCTTCTAAATATCTTGAGCTTCATGTAAAAAAAGCTAAGGAATTAAGATTCTTATCTTTCATAAATGTTCTCAGGTTTGGTGAAATATGACAAGTGATAGATTTGTTATTAAGGTATTCATGCCATTGTCACAACCTCTCTCTTTTCAAATAGTGAGATGTTACTCTGGCAGCTTGGAAATTTACTAAACTCATTACTGAGTGACTGAGAATAGCTCTGATGCATCTGTTAAATATTTCATAAAGACAAGGCAAATAAAGTAGAAAT--------TACCTTGTGGAAAAACAGGATACCCTCAAGCAGTCAGAGGTTCTCACCAATATCCACTTTGAATAATTACTCTTCCTGC-CATTATCCAGAATATAAAAATATATTCAAAGTCTCCAAAATGTTTACCCTTACTAAAAGCAAAGCCAAAAATCAAAGAGCTTTATT---AGTAAGTACTTGATAGTTTCG-CAACTCATCGCATGAATTTAAAATACTCTTACCTTTCAGTTCAGCCAACATACTATTCTATATCAAATATCTTCT--ACAACACAAAATATTTAGAACCTTCTGCAGTGTGCAGTTATTTTTATACCAGAATAAGTTTTCAGGGACAAAGTGTTCATTTT a score=11104 s mm7.chr15_random 124668 350 + 7075849 AAAAGGCAATGAATGCAGATTT---GAAAGGCAAAACCATGCTTAAATGCAGATTAAAAAAAAAACACAAATAAATCAAATTGATTTTGTGAT-------------------CTCTCACCTACTTTTTGACTTGAGGTTCACAAG-GTAATCTATTTTGATTGTAATATTAAAAGAGTTGACAGTTTCATCGCAGGTTAGGGACAAAGT-CTCAATATAATTTGCAAATTAATTAAA--AATACCTGGCAATGCTAATGGAACATTAAAATGGAAGACAGAAAAGCT-ATGTTATATAAGCTAATTTATTGCTTTTATGGAGACTATTGAAAACACA--TTTAAAATGTCTATGCTACTTTCCATAAATTAAAAAAGAA s bosTau2.scaffold5718 42102 375 - 51516 AAAAAGTAATGAAAGCAGATTTCAAGAAAGTTAAAATCACACT-AAATGCAGG--AGAAAAAAAGCAAGAAGAAAGTCAATTAACTTCAAGATGACCCATTGCAAAGCCTTCTTTGCATCTACTGCTCTGTTCTGGATTCATAAACATGATTTTTAAAAATCAAAATGCTCAAAGACTTGGAAGATTCACTGTAATTTTGGGGAAAAGTTCTCAATGTGATTTACAAATTGATTAAATAACCTCCTGGCAACACTAACAGAATACTACAGGGGCAGGTGGAAAATTTCGTGTTATATAGGCCAATTTATTTCTTTTAGGGATGCTACTGAAAATATATCTTTTAAAGGTATATTTTTCTTTCCA-AAATTAAAAGAAAA a score=4197 s mm7.chr15_random 173787 103 + 7075849 TTATTCATTCTTTTAACGACAAAAAAGCAAGAATTAACTGATGCTACTTTAGGCACTGAAATGTTTGCATGCCAACAATTACATAAGAATTTCAGTTATTCAA s bosTau2.scaffold2984 113 103 + 94402 TTCTTTTTTCTCTTAGAGTAAAAGTAACAAAGATCAAATTATGATGGGCCAGTCACTGAAATGCTTGCATACCAACAATGGGATAGGGATTTCAACTAATCAA a score=24341 s mm7.chr15_random 174224 1046 + 7075849 tcaaaaaaaaaaaaAAAAAAAAAAAAGATTATATCACATGGATCACATGGATATAGCTGTCACCCAAGGAGGTCTGGGAAAATGGGCTGCGTCTTTCCGGATTCCCTGAATGGCCTAATGTGTGCTTCACATCCCTTTATGGTGAAGGTGAAATTGGAGGAGGTAAGTTAAATCCCACCCTAGCTTACAGACTCTGCAGT-TTTTCCTGTCTGCAAACTACACTACTGACCTCTGCTC----ATTCTTCACCTCTTTGGCAACATCCCATCCATCTCCTTACA---TCCTTACAC-------TGACAGATTTA-GGGATGACAGATTTTTCTCTAATTACTAGGATTGCAGATGGATTGATTGCCAACTTACTGACAAGTCTGAGAGGGAAGGAGAGTTGAAATAGGATCTCTGATCACCTGTAGCAAAAAAT-AATTCCTTATACTTCCAACCTATTATTTTGTTAAATGCTCAAGAGCTTGGTTAATGAATTCAGGGAATACTTGTA---------TACAACAAAATTTTCCTTGAAACATTACCCTCTTTGTAACTGTAT----CTATTATTCTAAAAATAGTCAAGCTAATGGTATTAGTTGCAGAAGCTCTCTGTGTCAAGAACAA--ATATTAATAATCATTTAGATCACCAGAGACTATACAGCATGTTCTAGCCTTTCTAATTATTTAATGGCTTTAATTTCATTATAAATAAGCTC-------------ATTCAAGGCCTTCAAAATTGCTACCAGGAAAATTATTAGAAATTG--TTCTAAAGTGAAAATAAAAAAAGGTG--TTGCCAGGT------------CTATCATTTTGAAACATATGTCATTATAACACAACCACTCATACAGTGAATCACTTATTACCACATTTATAACCAGTCATAGATGTTATCTTCTGGACTACAATTCTTCATATGAGAATTCTGTATAAATCATTGACTTTCCCAATCTTCATGGAGTGTATACTCATAAAGAAAGTCAGTCCTATTAAGATCACTGTGTGTTCTAGTGAAAATACATGTGCAATAAAAGACAG---ATTCTCACA---GTAT-------------AACCTGGATGTTAAAGTAGTTCCTTTC s bosTau2.scaffold2984 2103 1091 + 94402 TCAAACTGTGAAAAGCAGTACAAATAAAATGCATTACCTTGA----AGGAATGTGCCTCTCACCT-------TCAGAGCAAATGGGCTGTTGCTTCCTGGCCTGCCTGAATTATCTGGTATGTTCTCAAGGTTATTGTAGAATAAAGGAAAAATTGGAGGAGACCAATAAAAACTCACCCTAGGCTACAGAATCTTGGGTGCTTCCCCCTCTGCAAGGAGTGCTACTGACCTCAGGTCTGAGATAACTCTCCTCTTC-------TCACCTCAATATCTCTATGGGTTCCTTGGACAGCCAGGTGATGGATTAACGGGTTGTCAGATTCTCCTTTAATAACTAGAAGCACAGATGGATTGATTGTCACATTAGTGGCAAGTCCCTGAGAGGAAAGAAGTTGAAATAGAAGCTCTGGGCAATTGCAGCCAAGCGTAAATACCTCACATTGTCAACATGGTATTTTTTCATTTGTTTAGTTGCTTAGATACCAAAAGTAGGAAATAATTATATGAGGTTATTGCATAAAGTTTTACCTTGAAGTCTTAGCTTCCTAATAAATGTATGATATCAGAATTTTAAAGATAGTGAAGCTAGCAGAATCAGCTGTAGAATCCTTTTGTGTTAGGAATAAACATACTAATAATCAC----ATCACCAGAGACCA-GCAGCATGTTCAGGCTTTTCTAATTACTTTACAGTTTTAACTTCATTAAGAGCAGGCTCTGATTAAGAATATTTTCCATGTTTTAAAAATGAACACCAGAAATTTTATGAAAAAAGAGCTTCTGAAACTAAAATAATCTTAAGTAGTTTGCCAGGtatttttaatataatattctcttaaaatgtaaaatataat-ataaaaCCATGAATAT------TCA-TTATCACTACACAGATGACCAGTACTGAATATTAATTTGTGGGCTGACAAAGTCATTGTAACAATCCCTTATGCAAAATATAATTCCCCAA-CCCCATGGAGTG-GTGTTTATGAAAGAAATCAATGCTATTACAATCAAAATGAATTCTAACTGAAGGGCTGATTTGATAATAGAAAGGGTAATATTACAAATGTATTTTCAAATCTATGAACCTCGATGTGTA--TAGTTCCTTTC a score=20651 s mm7.chr15_random 176769 1127 + 7075849 AGAGGATAAAGATTATTCACATGAAAACTTTT-ATAATATGGTTCTGTTATA----------CTGAATTTTCAAACTA-----------AGAAAATTCTTGTCAGATTTTTCCCCT----------AAGGGACATTGTGTTATTTTAT-----TACC-CTTAGTTA-AGTAGAAGTAAAATTATTGAGCATTATTTTCATAA------TTTACAGAATAATTAAACATAAATAGGATCTCCACATCTTA------------------------TTTCTGAAGT----------------TTCCAGTGGGTTCTTCAGACTCAGTTATGCATATTGCTTAATTATCTCAGAATATGTCT-GAAATGTTATGTACTATGCTCATTTTTATGT--TTGCAGATTGATGGGCAATAACTTATCT-ACACTGCATATTTTGAATTACTGGAATGCCTCCAAGCTTGCAGTCTGTTCTTCTTTCAAAAAGAA---AGGGACAAAATAAAGCACAGTTTCATGTCAGCGGAT-ATCAAAATATAGCCTTTATGTAATTTTGAGCTTAATTTAATCCCTGGCATTGCTGAACTCTGATTAAATGTATTTGGATCAATGTTAATTGGCTTAGCTAGGAAGTTCATATCATTCAGTAACACATAGCTATATGAATTACACCCTTTGTTGTTTCCTTTTGCAGAGGGCAATATATTTCTTTCTGTATCATTGAATTATA--GGAAATCTGTTATTGGTGAAATGACAGCTGAAT-TGAACTCCAAAAATT-TATAAATTGGAGACACTGTAGGGAATTACTTACATATGATAAATGAGCATGTAGACAATAAA-AATATTTAGATCCAC-----TCATTGTGCTTTTTCTATTATTGTTTAAAATTTCCATTTTGTTCAATTTCAGGTGGAAA----TTCTAGTATGAACTCTTGACTATCTCCCTTGC---ATCTTTTTTGAAGAAGAGAAAACTCAAGAATCCACGTCAACCATTTCT--------TTAAAATAATTTCAGCTAATGTTTTCTAGCAAGACTTTATAGAGTACTCAGTTATGAATTCAGTGACTTTGTTCTCTCAAGTTAGTGAGCCAAAGAAGCCATTGGTAAAAATAAAAACCATATGTGGAATAGGATACATAGCTAATTCAACATTTATTTA-CCCCATTCATGATGCTATTCTAGTGTCTTTACATATTTAATATGTAATATATACCAATACATACATTc s bosTau2.scaffold2984 4320 1204 + 94402 AAAGGATAAAGATTGCTCATTAGAAAACTTTTCACAATAGGACTCTGTTGTGTCCATTTCCTCTAAGTTTTGAAGCTACTTGCACAGGTAGAAAATGTGCTTTTGTTTTGTCATCTTAAAATATAAAATAGACTATGAAATAATATATGTATGTATCACTTGTTTATAATACAAATCACACTAC--ATTATTATGTTATTAACTCTTGTTTAAAATAGAATAAAGAATAACTATAATTCCTAAACCCTAGAATACATTTTTATACTAATTAGGCTTATGATATAATAAAAAACATCTAACTTTAATTGATTCTTTAAAGCACACTATATGTGGTATTTAATTATTTTAAAGCATGTTTTAAAATGTTAG--ACTGCGCTCAGTGTTAAGTCTTTTTTTGTCAGTAGGTAACAACTTATTTGACATTGAATATTCTGAATTATTGGAAAACCTCCAAGTCTGCAATCTGTTCTTCCTTAAAAAGGAAGTAAAGAACAAAATAAAGCAACTTTAAATGTCATTTAATTAATAAAATTTAGCTTTTATAGAATCCTGAGCTTAATTGGATTGCTGGCATTGCTGAGCTCTGATTAAATGCAGTTGGATCAATGTTAACATGCTTAACTATGGGGATCACATCAGAGAGGCTC-TGTGGTTGGATGAATTATGCTTCTTGCTTTTTCT---------GGACTAATTTCTTTCTCCTATATCATTAGATCATGTTTAAAATTAGTTATTCTTTAAGTGACAGAAGATTCCAAACTTGGAAGATTATGTAACAGGAAACCATCATAGCCAATCACTCACTTATGATAAACGACTAACCAGGAAAGACATAGTTTATAGACTCTTAGTTATGATTATGCTTGCCATTTTGGTTTTCTTTCTTTTATTCTTTTTCTATATCTGAAGGAAAAAACTATTGATGTAAGCACTCAATATTGTAACATGACAGGTTTGCTTTGAAGCAGAAAAAATGCCAGAGCCCA---CAAAGTTGTCTGATGATGGTTAGGAGAAAATACGCTTACCTTCTCTTGAAAGAAGACAAGGTTAGCTCAGAAATGCATTAATTCTTTTTGTTCACT------------TCAAACAAGACAGCAGCAAAAAGA-----CATTTCCAAAATAACATGCATGGATACTTTGACCCGTTTTTATCCTCATTAGTGATGCTATTTTGTAGTTTTTATATATTTTA--------ATATACCATTCAATATATCC a score=8977 s mm7.chr15_random 178334 1547 + 7075849 TTGTATTAGAATAATTACCATAAAAATAGCATTCAATTCATTTT-CTATCCCATTCTCTAAAATAACTACTAATTTCATCTTAGAGGTCAAATAAAATTATCTTCCTCTGTCTTAACAACTAGGACATTGATAATA-GTTTGGCTCACCAGGGCTCATTTTATTACCAAAGCAAAAGTGTACCTTTTTCTATTCC----------AAGAGAAATAGT-------CACAAAATAAGGATAGAATATATTTCAACATCACAAAATACATGTTTGAAAAATGTTATGGTATCTAAA-ATATTTTCTTATACGAAGTAGTTAGGAGTTctcccctcaaccaggcatcctccttccctgggacctcattgtctctggagagttaggcatattttttAAGATAATTAGAAACTTATTTCTCCTTTCAGATGAGACCAGTATGTGTGTGCATTTTCTTT-------------------------CTTAAAGCATG---------------------------------TTCTCT------------------CTCCTCCACT-CCCCAGTCTTGAAGAT--------------AGTATGAGGG-----AACCCTTATCTTCCCCACAATTAGTAGAAGAATG---------ACATTCTCTCTGGGCTTAAGATGCCTCTGACTTAAGCATGTTTTAGGAAGCA----ACTCCAATGAAAGAAA---------TTCTGAAAACATTTGAATTTTACAATCACTGTGAAATGCCATTTACTTCCTTTTTTAT--------------------------------GTTCCTGAATAA--------------------CTTTGGTGTATTTTTATTGGAATAAAGTGATAC-----AAGAAATAAAGTGGTTATTTT-----CTAAAGCATAG------------------GAGAAAAACAGAGTTAGTGAACCAATATTTTTGT------------------------------------------------------------GTTTTAATTT--------GTTTATCATAACACACTGCCTTG-------ATCCCTAAACCAGGCTTCTCAAATAA--GCAAAGCAACTGTTAATCAGAGACCTCTG--GCTGGAGGGATATGCACAGCTACCAGACTTGGCACAAATCACGTTCTCTCATACTAGATATATA--TTTGGAAGT-TATTTTCTATGAAGACATTAACTTGGCA---------ACCACAATACACATAACAGAAACTGTTCAAAATGCACCTTGTTGACA----GTTACTTCTATTTCCTTGCCCAAAGTAATGAATTGCTATAGTTGTTACTGGTTCAAGAGCATTTAAAGAGCTTCAAGAATC--AATCCCAAATAAAACAAACATTTTGCTGAAATTCTTTGTATTACTCAGTGT-------CTTATAAAAAAAA--AAAACTTCGTTTTTGAAGATTGTTATCTAGTCACTTATCTTCTCTAGAAGACTAAGTGCAACGTTGAGTATATGTAAGAAAAATAGCAAATTAATATTTATGGGATGAATGTT-TCATATGACCTAACATAGATGTCACAACGAAAATCA-----AAAACATAGTCCCTATGTACTTCAACTATAACTTTTAT-GTATAGTTGTGATCTGTCATTATTGCTCTCATGTAAATATTAAACATATTTTCTGGGAGAAAACTAAACTCCTTGTTATTTTTCTAATTATCTTAATTGCAAGAA----------ACAACAATAACAGAAAAT----AATTTACAAAAGCAATTTGGTT-GAATTTGCCTCAAAGTAAACCATAATGTTGTTGGGAGATGTCTATTCAGTCACGAGCTTATTAACTTGACTCTGATTT s bosTau2.scaffold2984 5549 1790 + 94402 TTATATTAGGAAATTTATTACGATAATATTATTTAATCTATATTACTACTTTCTCCTCTAAAATAAACATTCATCTCATTTTAGAGCTAGGATTTAGTGATCTTTCTATGGCTAGACAACTAATA-AGAGATGACATGACTTACTTGCTATGATATTTCTCACTCTCACAGTTCAGGCATATTTTTTTTTTGTCCCATAGTCAGTCAGAGAAATCATACATTGACATGAAGCAAACACTAAGTATCTTTCAATTTTACCAAATTTATGTTTAAGTAATATTGTAAAACATAAATATTTATTCCTATAGACAAGACTGAGGAGGAGTA----AGACCAAGCATCTTA--------------------TTCTTGATAGGTATGTGTATGT------ATAATTCTGTGGTCAATTTTGTATTTATA-GTCACTAATATACATGTGTAActgccctggtggctcagatggtaaagcgtctgcctacagtgtgggagacccaggttcaatccctgggttgggaagatcctctggggaaggaaatggcaacctactccagtactcttgcctagaaaatcccatggacaaagaagtgtggtaggctacagtccatgtggtcacaaagaatcggacacgactgagcaacttcacttTCTCTCCAGAGCTGGAATTACATTTTCCTATCTACAATTTTAAGAGTAAAGCATTAGAATCAGAGAAAATGACCTACATCACATAACACCTGA--TTGACTTGTGCTGTGGC---CCCTGTGCTTTTTCTGTTATTCTTGGAGGATGAGGAGTGTaccatattcctggcacctgaatcagcatctgacacatagaagggccacagtaaacttctagtgaatgaCAGAGAAAACTTTGAAAAAGTGAAAACTTGATTTTTAAAGTTAAAATTTAGAACTCGGGCTCTTTTTCAGATGAAAGCATGCTTTTTAAAGTTATTTTTTTATTACATAACATCTATTTCTCACTCCACTGCCAGGCCATCAGGAGGCAGTGTGTGTGACAGGATTTTAGCTTCCACCTCCTTTGAACACAAGGCATTGTCTTACCCTTTTATTTATAAACAAAG-----GAAACAATTGCCAGTCAGTTGTTAATCAGAGGCCTCTGCAGCTGGGAGGAAATTAGCCATTACCTCAGTTAAACCAGTTTACATTCATCCTCACTTAGCACAGGACTCTAAAGGTGTGTTTTCCTCCAAGGCAAGAACTTGGCATGATCTTTCGCC----TATAGCTAGCAGGAACCAACCAAAA-------TGTGGAAAAAAGGCTGCATCTTTTTTCTTACCAGAGGCTACGGATTAGTGAACTCATTACAGACTCAAG----TGTGAGCACCATTAAGCATTGAGACCCTCAAGGAAAT-AACGTTTTGT----GTATTCTGTCTTAATCAGTTTTTCTCTGTTTGCAAACACAATCAAAATTCCCGTAGTGAGGACTATAACTCAGTCACCC-------------------------TGTTATATATCTAGGACTAGCACAGCAAATAAATATTTATGAG-TAAATGTCATCACATGACCTTTCTTAGGAGAAGCAATGGAAACCAAATCCAAAACATGATCCAAATCCAGTTTGAGTTCAGTTTTCATGGGAAGGTTGGTGTCTGTATCTGTTGTTCTTAAATGAATGCTCAAC--CTCTTCCATCTGAAAAGTGAAGTCATTGCTATTTTTCTAAATATCTCAGATACAAAAGAAAACCAATCACAACAATAACAAAAAACCTTAAAAGAAAAAAAAAAATCAGGTCAAAATTTGCTTTAAACCAAACC-CAGTGCT-TTAGAATGTGTGTACT-----------TTATCACCTTACCTCTGATTT a score=3504 s mm7.chr15_random 179884 140 + 7075849 TGTATTTTAGAGAGCAACTCCAATGAAAGAAAT-----------TCTGAAAACATTTG-----------AATTTTACAATCA----CTATAAAATTCTGTTTAATTCCCTTTTTTTATGTTCCTGGTTTACTTTGGTGTGTTTTTACTGGGATGAAGTTATACAAG s bosTau2.scaffold2984 10164 163 + 94402 TGTGTTTTAGGAAACAACTCCAGTGAAAGAGATCTTGCCGGAAGTCAGAAGACACATGTCTAAGGACTAACTTCTACAGTCAACATCCCTGAGATTCCACT---TCCCCATCTCTTTGGTTCCCAATCGGCTGTGGAAGGTTCCTATTAAGATAAAAGAATATAAG a score=10773 s mm7.chr15_random 182246 352 + 7075849 CTAATTAACTGTATTCAGCAATGTGATGTTTGTGAAGTATTATAAGGCACTTTCTCTAGTGTACTTTATTTAAGAGTTTAAATAACTATTGGGTCACTGTTAATATACATGAGCCAGAAAAGAAATGTTTGAAAATCCCCACATTGCA--TATTTTGCCTATTGCTTCCATAATTTATTTAAA-TATTAAGTAACTTAAATCCATTTTGTTATTTTATTTTCCCTGA---TTATACAGTATT--------GGCTTTAATATTGGAACACTTGATTTTTAAGGATATTA-CTATTTTATTTTTAAAGAACTGTGCCATTAAAATATAACTCTCATATCCTATAATTAGTGTATGTCCATGATATAGTT s bosTau2.scaffold2984 11101 352 + 94402 CTGATTAACTGTAATCAGAAAT-TGATGTTTGCCAAGTATTATATGGCCCTTTCCCTAGTGTACTTTA-TTAACAGATTCAATATGCATTGGGCCACTGTTTACACATTTAAGATGAAACAGAAAATTTTAAAATATCCAATATAGCAAGTATTTTCCATGCTAC-------ATTTATCTAAAGCATTCAGTGACTTAGATCCATCTCAGTCTTTTATTTTTTTTTGAATTTATACAGCATCTTGGTCAAAGTTTCAGTATAGAG-----TTATTTTTAACCAAATTGTCTATTCTTTTCTTTAAAaatggctttattaaaacataatta-catatcttacaattcaaatattttaattctacaatt a score=2423 s mm7.chr15_random 196891 86 + 7075849 TTAAAATTTAGCATGTTTTTGAACATGGGAGATAGACTGCAAATAAAATAGGAAGGAGAGAACGCACTTATTTCTACATTAAGCTG s bosTau2.scaffold2984 14704 86 + 94402 tCAGAGGCTAATATTTACTAGAACATGTAGAGTAGGCTTGGGACTGAGTAGAAAGTAGAGAACTAAACTGCTTCTACATTGAAGTG a score=9673 s mm7.chr15_random 198138 935 + 7075849 AATAGCTTCTTTTCCCAGGAAGGATCTAAACCACAGAGAGTTAAGCCTATAAGACAGAATTAATAGTTTGGTTTACTGAAGGCAGAGAGC--AGCATACTTCAATTTTATGTACTCAATGGAGATTTACAAA-AACTTTCAACTAGAATGTTTTCTAGAATATGTAGCTACATTCTTTATGAGAATACAAACTAAATCTGACATGATCTATGAAAACTGTAAATATATATTAAATGCAAACATATATTCTTCtttatttattgacctacttttctctcctccctctccatctatttctacttcaacactatctctctagctatctatcatgccatctaaccacccatttatgcttctatccatctTCTGATTAATAATGGCTAGAAAAAAACATCCTGTGTTCTCACACAACTGGTTATATGGTGATGCACTAACTGGTGACATCAGTGAAGTGTCATAAATACAAAGTGAAGGGAGCTGGAAGTATTTCTGCCTCAGG--CAAAAGACACAGGGAGGGGCATAACTGCTAT------------------TCTACGTCTCCATAGAT---------TGAACAA-AGATATAACGGAAGAGAATACCTATCACAAAAATCACAACAGGTTTCTTTTCCTTTCTTTTAATGTGC-AAATAAAACTAGAAATATGTAAAAGCAGGGAGCATATTGAGAAT--TTTTTACTCTGCTCACTTTCTTCACATCTAAGACCACTGGGTCATGATTAAAGATGCTATGCTGTTTTCACACATTATTGT-ATT-----------TGGAAGACATTACTGGTTATGGTGTGTAGGTAGGGCTATGGGACAAGGAGACATGAAGTACATGGGATAGTTTCTGTCTCGGTAACATGTCAATAATTGTGA-----TGGTCCCATTGCTTGTTCTCCT-TTCCCACATTCTACCATATTTTCCCCAAA----TAGGATCTGAGTGCACCTCTGAGCACTGCATTTGT s bosTau2.scaffold2984 18754 868 + 94402 AGCAACCCCTGCTCCTAGGCAGGCTCTAAGCTTCAGAGAGCTAAATCCA--AGAAATGGCCACTTTACTGGCTTAATGAATATACAGAACTCACCGTACCGCAGTTTTTTGCACTCTATGGAGCCAACTGAGTAATTTTTTTCTAAAACATCTTCTAGGATCTTCGTCTATCTAGTACACAAGAATACAAATTGGAGTTGTCATGGTACATTCAAA----AAATATG--------GCTATCATATATG----------TATATACCTA------TCACGtatctatcaat-tatct----------attatctatctatctatc-atcat--catctatccatctatcaatagatctatc---------------------taGA----------CTTTTTTCTTCCA-----------ATGTTAATGAAAT-----------TCTTAGAAGGTTCATC--TGCAAAACAAAGGCAGCCAGCAGTATTTTTCCTTCAGGAGCAAAAGACCTGAGCA-----ATAACTGTCAGCTCAAGAATAATCATCCATTTATACTTTCAGAGATAATAAGAAATGAGTAATAGACA-ATTGCAGGGAAGGGTTTACCAGAAAAAGCA-AATA--CTTATCTCTCTCTCTCTTAATGTGCTGCACACAACCGGAAGTGGAGGTAGACAGTGCGCAGCTGGAGTGTGGCACTTACTCTGA-AACCTTCTTGGCATTCACAGCAATTTCATCATCCTTAAAGATGAGATGTTA-------ACATTATTGTTATTAGCACTGTGACTGAAAGACAT-AATGGTCACAGTATGAAATCAAGAGTGAGAGCCT-GCAGAGAAGGGGGATGTGGGGT-GCTCATTTCCTGATAACCCCTAGTTAAATGGGAACACTCAACCCCTAGGCTTGCCACCCTGCTCCCCCATTCCAC------TTCCCTAAAATAATAGAATCTGACTACATCTCTGAACACTGTGTTTGT a score=6129 s mm7.chr15_random 199073 168 + 7075849 CATTGTTAGGTGAAT---CTGGATTCTCCTTACATCATTACATCATGGAGTAGAGAGAGCACAGATACCCTCGTCAAATCAAATAAATGTAACATTACTCATTTGACCGCATTTCCTGTATGTTGCTAAATAGACACTTAACTTCTGAGGCTACATGCTCCTCTTATGGAT s bosTau2.scaffold2984 19802 167 + 94402 TACTGCTGGGTGAATATTCTGTATTCTTTTCACATCATTCACCCGT----CAAATGCAGCACAGATATCTTTGTCAAGTCAAATAAAAATAAAATTTCTTATTTGATTGCATTTACCACATTATACTGAATAGTGATTTACCTTCTTATTCCAGATGCTCTTTTCCCAGAT a score=33098 s mm7.chr15_random 214741 1154 + 7075849 GAGTGATTTCCCAGGATATCAAGCAATACCAGAAACAAGAACT---TAATTATGATTAATGTCTGTACAGATTTGTTTTATAAT---AAAAATATGTTCATGTATATTATCCATAAAAATCTGT-GCACAGCTTTGTGACATAAGCAATATATTAACATTCTCATTTTATGATAATAGATTTGATTCTTAGCTGGATTAAATATCTCACAGAAGAGAACAATATTGGCTTGTAATGTACTGTATTTTCCAACAGTATTTGGAAATTTGTCTCTTGATCCCAAATCTGCCATCATTTCTCTCTGTGCATAGTTTTGAAAATAATTTTAAACTCCATGAAGGTTCT------AGTAATAATTATGTGCTGGAAATTTT-CATGCATTTT-AAATAGGAACAACCTTTCA-AATTCTGCAGCGTACAG-AAATTTGCATTTTTAAAGAAAATTAGTTTTGTTTTCTCTGAAATGATTGCCAACTGATCCATGAATTCAAAAACAAAA-ACAGAATTAAAGCTCTCAAAAAGAATGCCTGGAACTTACATTCTCTCCCCCCATGGAATTAGTTATGAAGGCACTTGGTTATTTTGTTTGTTTTAAGGACCTTAGGAAAATTGACTTCCAGTGTTACTGAAATCATATTTTTAGTGGCAAACATTGGCAGAAAGACAACTTACAATATGAAAACCTT--AAGAAACCATTTTCACCTTCAGGTTTATTCAGCAATCTCTGGAAGGATGCAATTTGCAAAATGATAGGTATGTGATTTTGTAACAT--------------------------------------------GATTGCTGTTGTTTGA-AAGTC-CAAATAGATATAATGCCAAGTGTACAATGAATTAAATTAAAGAAAACCTAATTACAAATTCTACATTTTGTTGAAACATAATAAAAAGGATTCAAATGTGGTT---GTTTTCAGATAAATATACCATATGACCTCAAAAACAATTGGAACAAACAAGTCTGTTTACAAAGCAATTAAAACTCTGTC---CAGTGCAGTGGAAT---GATTTACATAGGATAATTCTCACCTACAGAACT------------ATAGTTTCTTTCTTAAAA-------TTTTGTGTTTACTGAATTAGGT---------------TTTGCAAAGGTTAAAA---GAATATTCC----ATAAATGTTCTCTTTCAAGTTGAACACTGTATCTTCTCAATGGTTACTGACATATAAGGTATCC---AAAATCCATTTGTT s bosTau2.scaffold2984 35854 1199 + 94402 gaaTCACCTCAGAGGATATTGAATATCATCAAATGTAAGAAATGATTATTTGTGGTTGACATCTGTACAGATTTATTTTCACATTCAAAaaacattttcatatgcattatcccatttaatctctagcatgattctgtcaggtaagcattatat---catcctcattcgatgacaaaagatttgatgctcaggtggattaattatcttgctgaatagaatgaaattaggttgtaatg-------------aacagtgatttgaaa---gtctcctgacttgaaatccATAGGTATTCCTCTGTGCACAGAATTAGCAAACGAATATTAGATTCCAGGAAGGTCTTGTAAGAAATAATAATGATGTGCTGGAATTTTTTCATGCATTTTTAAATAGGACTAACATATCATGACTTTACAGCACACAGGAAATTTGCATTTTCAAAGAAATTTTTCTTTGTTTCCTATGAGTTGATTGCCAACTGATCCATAAATTCCAAAACAAAACATGAAATTAAAGCACTCAAAATGACTGCCTGAAATTCAT-------------------TTAA--GTGAAAACACTTGGTGATTTTACTTAGTCTAAGGGCTTTAGAAAAATTGACTTTCAATGCTGATGAAATAATGTTTTAAATGACAAACGTTGGCAAGAAGGCAAT-----ATATCAATACTCTTGGAGAAGGCATTTTTGTCTCCAGATTTAGTCATAAATCTTTGGAATGATGAAATTT----AATGTTTGTTTTGTGACTTAGCAAAATGACATTAACCTTTGATGACTCCAAAAGCCAGTGTCTTAGATGGGGATTCCTTTGGTTTAACAGGTCACAATGGGATAGAAAGTCAGCTGTACAGTGGATTAAGTTGAGAAAAGCTCACATTAAAATTCTAAATTCCATTGAAAA--AATAATAAAAATTCTAGAATGGTTCTCATTTCCAGGGAAATGCACCATATGTCCTCTGAAAC-ACAGGCTGAACCAAATGCATTAAGAGAGCAATTAAAATGCTGTCCCACAGTGC--TGGAATATCACTTCACATATGGC-ATCCTCACCTGTAACAATTTTTTACTTTACTTGGCTTCTTTCATAAAACCAGCTCTTTCTTTTTTAATTGCTTTGGTCAAAAATAAGATCCATTTACAAGAATAAAAAATGGAATACTTTTAGAAAAGATATTTATGTTCAAGTTCAATGTC---------------TTACTAACATGTA----ATCCCTGAAAATCTAATTTTT a score=3696 s mm7.chr15_random 226098 136 + 7075849 AACAACAACAAAAAAATCTAATTTCC-ACCAAAACTTTACTTTTTTCTATATAGAACTATTTTTGATCATCCAGAAAAATAAGGTATTTCTATCATAGAAAATGACATATCACACAGATATTATCATAGAGAAAATA s bosTau2.scaffold2984 37814 127 + 94402 AACAAAATGCAAGATATCTATTTTTCTGCCAAAACCCTTTGTTTTCTTACATATAGCTGTTATTGGTCACCCAGGGAAATGAGACTTTTCAACAACAGAAATGG----------CAGAAAATATCATTAAAAGCATA a score=8687 s mm7.chr15_random 227131 741 + 7075849 agatagataAAATATCAATATAGAACACATAGTGAATCCTTATTT---ATTTTAAAAAAACAATAGTTCA-AAAGTTTAAGTATCTTAATGAAAATC-------------------GTGGAA-AATGAAAATACAAATTGAATGTATGTTTCTGTGTTAATTGCTTATAGG--CTAATTGCTTCCAGGTTACTTTTATTCCACAGTTCATTTCTGAAGTGCATACTTCT---CTGAACTGAATTCTTGTTCCCTTACATCATTCATAATTTTAGAAAACAAAGACAATTAATAGCAATATAACTAAGAAGATGTTAATGGGAATTGTAGCATGCTAACCCACACAGT-----------------ATTTATGCATTGAATATTATTTTGACCCAAAGTAACAGTAGTGT-TTGAGTAAACTAGTCCCTGACGTTGTGTTTTAGATAGTAAATATAAAAAAGCACAACCACTAA-TTGTAGAAATCATATGGGATTTTAGTTTGAACCTGGAA-------CACTGTGGAATACAGGCTAGCAGCCACACAGACACTGTTGAAAATCTCAGGACTGGTCATTATTCCAAGTTTGGCTTATCACTTTCTTTGCATTGAGCAATCTTTAAGACATTGCTTTAAGAGGCACACCTCCACATACTATCTTTGAATATTCTTCT--AAGTTATAGCAACAGGGTAATTTCTAAAATATAATGGAGAAGAGCTAATGACACTAAAATGTACATCTGAGAAATGGGAG--CATCCCACATAGTTTacatgcacacacacacacagacaga s bosTau2.scaffold2984 42022 784 + 94402 agatccttaaaataatcctgtagaataagtatgatgtctttattttacattttaggaaaccca-agttcacaaaatgtaagtaccttgaagaaagtctcatagtataaatcaagaagtaaaacagtgaatctggaatctgaattcat--ttttatgtaactcacatctgggttctgaccacCCTGTGGTGCCTGGGGCTCCCCACCTCGG--CAGGGCTGCATATTTTTTATCTGAATTCATTTCTTG--ACCTCCCTTCACCCACAATCATATAGAACAGAAATTGTTAATGAATATTTAATTGAGGAGAATCTGATGagcatagtgatgttataa---acacagctggagaaaatgtcaggaatcctgggttccagtcatgctctggcctcaagaaatgatataaccttgaataaggtagttcagcattttgtgattcagatccttaaaatatgaaaagaggactattgacttgtgaaaattacatgagaaattacatgagaTCTGAGATCGAAAGCACCATG-AATGGGAGCCATTGGCGGCAGGGATAAAATCCATAATCCTGAAACTGAGCCTCATTTCAAGTTTAGCCTGCCAATG-CATTACACTAGCAAACTTTCAAACCCTTGGTTTTAGGTCTACTTTTCCTTCT-TTGTTTTTCTATTTTCTTCTTGGAATGGTAGCAACAGGAAATTTTCTATGATCATATGGAAAGAAAAT--TGAGTCTGGAACCTACACAT-AGAACTTAAAGATCGTCCTGCTTATTTCTTACTCATAAATAGCCGTAGACAAA a score=4684 s mm7.chr15_random 227908 299 + 7075849 GTTAGTTCTCAAAAAAGGCAGAAAGTACAGATAGGTTCGG-TATTTTAGAATCTTACTATAGTTTCTTATCAAGTCA------------------AGCCAGAGCTATATTTT------ACTCGATGAAAACATTACTAGTTGATCCTAATTTTATCACACACTATCTTGTCTGCCCCGAATATCCTTAGAAACAGTAGGTGGCTCTGTTGAGCTACTCTTTC----------------------------TAGAGCTACCACTT-GTGGGTGATAGCCCCTGCAAACATCC--------TAAAGCC-------------AAGTCCAT--AGTGATACCACATTCACATTGCTGT-AGTATTAATGCTGTGTTTTCTC s bosTau2.scaffold2984 42822 373 + 94402 GTAAGTTCCTCAAAAATGCTAAGAGGCCAGAGCAGCTCAAAGAGTTTAAAACCTCATTTATGATTCATATTTTATCACCCATTGTTTCTTTACGCAGCCACCACAGTATTTTTGTATGACTTGAC-AAAATATTGCT--TTAATGCTAATTTTATACCACACAGTTTGCTCTGCCCTGAACATCCCTC-CAGCAGCAGGTGGCTCTCTTGCACTATCCTTTCCGTGATTCAGCCTTCTCACTGCCTGGGATTCACCTACCGCTTGGTGGATGGCAATCCCCTCTAAGTTCCATGGGAGGAGAGGCCAAATAACTCAAGAAAATCCAGAAAATCATATCTCTTTCAAAGTGCTCTAAATGTTAATCTTGTGTTTCTTC a score=4137 s mm7.chr15_random 232211 195 + 7075849 TTCCAACTTTGCTATTTTGTAATCATAAATTTCCAATCAAGAATTATTTGCAGTTTTGATACAATTGTGAAAGTTATCAAATTTCACAAAATACAATCCATGCTGGAAATAAATATGTATATGCAAATA---AATCATTCCTTCTAGGAAATAATACACACAGATTCACCTGTTGTGAGAGTA-ATACCAACAGACATG s bosTau2.scaffold2984 44685 187 + 94402 TCCCTACTTTGCCACTTTTCAAGCCAATAGCTCCAAGCAAGAATAACTAAACATGTTTACCCAGTTGGAAAATCCATCAAATTCCATAAAATAGAATTAATATTGGTA----------ACTTGCACACAGCCAAGCAGTACTTCTAGTAG--CAAAAACACAGTTTTACTCTCTGTGGCAGCAGGTGCCATTCGACATG a score=11582 s mm7.chr15_random 234910 416 + 7075849 AAAATAACTTCAATAATTTACTTAGGAATTTGTATGAGGTTATTTTTCTGATCCTCTGAAGTA----TGTTTTTATGTGGGAACAAGTGTTTCCTGGTCTGTCCTAGAAAGAAG---------AAACACAGACTCTACAT----------CTCACTTACTGGAATGCAGGAAG-----------TTTAGATGAGCCATTTTAGAAAGGA-ACACAGttttgaaatgaaatctggacagctgcccatctctagtccc-ctggtaGAAAGAATGAAAAAGATTGTCAGAACAGTTTGGCTCTTCAAACTATGAAGTGCAAACATATTCTGACAGTCACTTGGCATGTGTGTACAAGACCAACAAAATGAAGCTCTTCATCCTGAGTATTTCATCAAATAAAGTCTGTTCCTTAGAAGCAAGGGCTAATGTTTAT-GACTAGATTTA------------AAAGTGAat s bosTau2.scaffold2984 47599 446 + 94402 AAAGCAGGTCCAAAATACCAATAAGGAGTCCATATAAAATTATTTTTCAAGTCCCCTGAAATGCCACTGCTT---------AATCAGTCTATGTTTTCCTATTTTGGAAAATAAGTTATTGGCAAACAGAGACCATACATACTTCTGTTTCTTACTTATCAGGATGCAACAAGGTGTGCAACAGTTTGGATGAGTTATTTTAGACAAGATATGTTTTTTCTAAATGAGATTTGGATAACAGCCTATGTCTAATCCCTCTGTGACTAAAGATGCAAAGAATTGTCAGAACAGTTTGGTTCATCAAGCTATAAAGTGCAAATATATTATGACACTCTCACAGCACATGTG----AAACCAACAGAAATAAACCTTTGATCCTTAGGAATCCTTCAAACAGGATCTA------AGAGGCAAAGGGGCAGTTTTATGGACTGGATATATATAATATAGTTAAAGTGAAT a score=6083 s mm7.chr15_random 240444 1007 + 7075849 acacacacacacacacacacacacacacacacaGGTCCACAGTGA---------------------------------TGATTATAAAGCAAGATCTTCAGACAGGCATTTATGATTATGGGGAATTTTGCAATTTTGTCAGAGTGTACCTGCCAGGACTG---------TTAAAG----TTTGGGGTCTAAAATTTAATTCCTCCATTATTTACTATATTAGGCCAAAATGATGGAA--ATTTTATAGAC--------------------ATTACTGGACTCTTAGAAACCAGAATAAAATGTACTTTT---ATAAAGAGATATAAGAAG-----------------------------------------------------TGATG-----------------TTAGAACTCT-------------ACAAT-----TTGTTGAAATGAAAT-------------------------------------AAAATTTATTTCAAAGT------------------------------------------ATAAAATGTATATTCTTATGCCATAGTTTTCATATACTTTCT----------AGTATATATC----CATTGGCATTTCTAAATAATGTCAAATTATCAAATTACTTTTCTT-TAGCCTAACTTTTTCTGCAT--GAATACTCTATAAAA----ATAGGGGCTCATTAAATGCATTGCTAAGACTACAATCATTTTTATGGAGTTTACTTTGATTTTAAAATTACTCTAAAAGTAGACC------TCATCCAGTTTCATCCTTTTTTTAAGGTCAATTTACAAATTTTCTGCT---GTGGAAAAGACATTTTTAAATCTTTCATTTAACGTATGAATTTGA---------TCTTAAATTTTTAAACATCAAC---AACTCCATGAAAGTTTGGCTACACACTTTCCATTTCAGTATTCCCTTGGCTTTGTGCTTTTTTAAAAAAGTCTTCTTCAGTACTGATATAAATCATAATT-TTCTTCTACCCCA---AAGTCTCACAATAAGATAGAAATGGGAGCTACAGCCTAGATTAGTAACAAT-----CACGGTCACCATCTTAGAGtttttgttttttgttttgttttttgtttttggttgttggttttgtttgtttgtttgtttgttttttgtAGTATTACATAATGAATCTTCTCTAATGTTCTCATCCATGTCCAAAAAGGAAATTCGAACATCACACTCAGTTTATCTGTAAGAGTTCCTAGTACTGTGCTATTTTCAAAGA s bosTau2.scaffold2984 51046 1206 + 94402 acacacacacacacacacacacacacacatatacatacacTATAACTGGTGTTAAAGAAATTATATTTCTGAAATACCTGACTACACAGGTAACTCTTTAGGTGGGACTTAATCTTTCAGCAGCTATTTGCAACTTTTTCAGGGTAAGACTCCTAGGACTAGAGATTAAATTAAATCACTTTTAGTG------ATTTAATTCTGCCATCATTTACTGGATCTGACAGAAGTGATGGGACCATTTTATAGAATAATAATGGGTCATAGTGGGATTACTGGACTCATTGGAGCTGTAACGCAATACACCTTTTAAACAGAAAGGGGGAAAAAGGAGATTCTGTGTTATACTATCCTTTGTTCTTCCTTTTCAATCTTTAGCTTTCATGATGCATTTTTGTCATTTTCCCCAGAGCTCTTTTAGTGTCATTCTCAATGAAGATTATCAAAGTGGAATGCTATATCTGGATTCATTGTTATGCTAACCAGTGCACAAGGTTTTTTTCATAGTGTTCCTCTCTTTTATTTAAAAAAATCAAGATAATTGAAAGGCATAAAATCTATGCTCCTAAGCCATC-TTTTCCTGTGCAGATTGACCGATAAAAGTATTCATCTCAGCATCACTACTACTAAATGGCACCAATTTATAAAATTGTTTTTATCATAGCCAG----TTTCTTCATTAGCAGAACCTGTGGAGGGCTGTGGGGTTTTGTGTATGGTAttagtgataacacatctacattt----------cattggttttaaaactattctgaatggatgacaatttatttttccattgcactctctcctcaaGGACAACTT-CCCCTTTCCTGTTACAGTAGAAAATGAATTCTTAG--CCTGGATTTAATGAGTATAGTAGAGTGTGTGAGTCTCAAAGTTTCAGAAATCTCCCGAAACTGCA--AAATGTTGGGAATTGACATTTGATTT---TCTTTTCTCTCTCTTGTTTTTTCTT-TCATAGTTTTCTTCAGAGTCCATAGATTCTAAAATGATACTGGCATCCCAGGGAAATTCCAGTATAATGCAGGAACTGGTGTCACAGACTACA--AATAGCAATGCATCTGTAAGCACCGTCTTTAAGTT----------------------------------------------------------TCCCTTGTAAGATACCATAGTACACCTTTCCTATTGCCTTCACTCACCTTTGAATAGCAAATGAGAATATCTCTTGGAATACACCTCCTGATACTTTTAGTGCTATGCTTCTTGCAGAAA a score=7131 s mm7.chr15_random 242433 668 + 7075849 ATGGGAGAGAGGGTAACTCTAGCCAAGTGAAAGGGAAGAGGAAGACACTAAGTCATTGGGACATAT---AGAAAGCAGATATTAATGGGACTCTCCT--ACCATTTTTGAAAGAACTATTT-----TAATCAGGTCTTCACACAAAGGTGTTCTTTTTGTCTGTTAATCATTCTTCCA--------AATATAATTTGTATTGCATAAATAATTAAAGCAGTGATTTTTTTTTCTATTTTCACCTTTGCAGTGGATTTTAGG--TTCCTTTTGGATTGCATCAGCAAGC-ATATCCAGGGCAAGGTGGCCTCTCCTGA----------------------------TTTTTCAATCCACCATAGATCAATACTTTAAATAAACATATTAATGATAAATTAGGAGGAAAATTAAATGTTTG---CACAGCA--------CCACTTTGTAATACTTTTTACTGTATCTAACACACACAAAAT-----TTCTATCTTTGTTTA---------TGACCTCAATTGAATCCTACACAGCATCTCAGGGTGGCAAGGCACAGGACATGTACCTGCACCACTCTGTGTA-TTGTGTTAGACAGCACTGACT-GAAGAATATGGAGGGAAGAACACAAAGGAAA----------TTAGTTTTGGAGCCTTTATTCTCCACACAGAGAGATGCTGTCTTTTGAATCTGCCACACATAGGACTTCTGCTGAAGAATTCATTGTCAATATG--TCCCCTGCTCACAAA s bosTau2.scaffold2984 52844 723 + 94402 ATGGGAGAG-GGACAGTTATAGACAAATGGTAAGAAATAGAAGT---CTCAGTCTTCAAGAAAAATCAAAGAGGAGAGAGATGGGTGTGGTTTTCCTCCACCATTTTTCCAAGACTTACTTAACCATAATGAGG-CTACAACCATAGA-GACATATTGCACTGT--ACCATTTCCCCATCAACAGAAAAAGAATTTAAATTACATGAATCACTAAGCCGGTCATTTTGTATCTT-------CCTTGGTTAT-----CCAGGAATTCTTTCTGAAACACAGCCACATGTTCTGCCCAGGGAaatg------cttctgaattatctgagttgaaggatgaacttttttttttcaatctttcacggatgaatacttttgtaaaacacaataaaaacgaattaggagaaaaaatgaaataaagagacacaaaattcaatttccactttgttat------caatagattcaacaggcataaaatgactgttcaattgctatgtaatttccaaatgattacacccaaatcttgcacatcactgcaaactggtgacaaacattttgcagaccatcacCAGCTGGCGTACTTCTCCTAAGTGGTATTGCTTTAAAGTGTACGGGGAGCAGTGTACAGAGATAAAGCGAAAGGGTGGACTTCTGGACCTTTATAACCGATAGAGAGGGACTCTGCCCTGTAACTCTTTCTCCTGTAAGAATTCTGCTTAAG-ATGGGTTGGAAGTATGCTTCATCTGCTTACAAA a score=4544 s mm7.chr15_random 246466 280 + 7075849 ATAACAAGTGCCAGAAATCAGTGT-ATGTATCCATGGTATGGAAA--AACGGAAAAGTGTATGTTTGGTAATGCTTTTGACAAAAGCTGCTATTGGACAT--TAAATTACAGAAGTTTCAATAATGACTGGGGCGGGGGCTCTACGGCCAACATCTTTGTTTT-GAGTACCTTGTCCAGAATTTCAGCAAAGAGCTGTCTCCTGACCTGGAATCTGTCCCCACTTAGGGAATTATATTTCTACAAATTGGCACAGTATTACTGACACTACAGGGCTTAAAGGACCT s bosTau2.scaffold2984 59350 278 + 94402 ATAAAAGGCACTAGATATTGGTGTTCTATATTCGTAATTTTGAAAGGAAGGAAAAAAAGGCTGTTTGGGGACACTTTTGGGAAAAGCTATGATTGAATAGCATAGTTTGGAGGAATTTCAGC----ACTTTAGTTATATTTCT----TTTACATCTTTTTTTGAGAGAACCTTGATCAGATGTCCATCAAACTCCTATTTTCAGAGCTGAAACCCCTTGCTCTGTTGAGGACTGGCGTTGTACTGATTGATAGAACTCTCCTGAGAATCTAAGGTTCAGAGAGCCT a score=16128 s mm7.chr15_random 247452 531 + 7075849 TTTGTCATGTAAGGTTTAATTTAATTTTCGACTTTCTGGTTTAATTTATATGGATAATGCATTTCATTCCCACTATTTA---CATCTTTTCTGCCTT-------------GCATTGTTTGGATATAA--CCAAAGTTAATGAAGGACATAGTGA----TTTACATTAAGAACATTCATCTTTTAGTCAGGAGTAGGTAGTGATTTATAGTTCCAAAGGCTACTATATTGTAGATAAAGGATGATACTTTCCCAGTTGACTGATCTCCATTAACTTC-CCCCATATATTTTCTCAGTGCCTATTTTTGCCCCTTCTTTCAAGCTTAAAAACTCACATTTTAATTTCTGACTTTTGGTAGTTTTCTTTTTTGAACC-----ATAATTCTGCACACTTATCTGCTGGAGGACAGGCTATGCACCATTCACTTTGACAAAGGAATTCTGTCATCCAAATCAGGGAAGTCCTGTGTATTTGGCTGTTGTCCTAGAATGGATACTTTTCAGGATGTCAG---CTAAGCTGGTACTTAATGAAATCTGATTTTCAAGTTCCTTTTCTCT s bosTau2.scaffold2984 61013 551 + 94402 TCTGTTGCACAATCTGTAATTTAACTTCCAATGTTCAAGCATACTTTATATGGATGCTATGTTCTGTTTCTACTATTTAAAGTATCTCCTCTGGCCTTTCAGATCTTCAGGCATTATTTGGGTAGAAAACCAAGGTTCCCGAAGAACAGACTGACTGGTTTTTGTGAAAACAATTAACATTTCATGCAGTACTAGGTGGCAATTTACAGCTCTAAAGGCTACTATGTTTTCGAAAAAGGATGGCAATTTCACAGTTGAGAGCTTTCCATTTACCTCTCTCTATAAACTTAGCTTGTACCTATTTTAGAGCTTTCTTTGA--TCTGAAATGTCACTTTTTAATTTCTGAAATTTTGTA-TTTTCTTCCTTCAGTTTGTTAATAATTTTGTGAAA-TAGTGACTGGAGCA-AAATGATGCACCG------TTAAGGGTAGAATTAGACCCTCCCAATCAGGGAGGTCCTGTGTACTCGGCAGCTGTCTTGTGATGGATGCTGTTTAGGACCTCAGCTTCTAGCCTGGCACTTAATATCATCTGATATCTATTCTCCGTTTCTCT a score=9602 s mm7.chr15_random 258760 782 + 7075849 TTTTAACATCATTGTTTACTACCTGTGTGTAAGGATTATT---GTACATTTTAAAACCTCTTATATAGCCTAGAGAGAATACAT---------TAGGCATTTTGA-GATACTTGTCATTTTCAGTGTACTTTTACTTATAACTAT-----TCATTTTTCATGCACAGTTATAGAATATAT----CTAAAATATTCTTTCTAATAAATTCTGCAAAGA--------------ACCCCACTCTCTAATTAAGCACCAAGACCTGTTCCAGATACATATGAAAGACTGACTTATACCAACCTTTCTGTAAGTGGCTGAGAAGGTTAACTGCAGCAATCTGGCAAAGAGGGCTGCAAACAGG--------TCCCAGAGATACTTGGAAATCAAGGAAGAATGGACAAAAGGCAGACAAGAAAATAGACAGATTGTGGCAGCCACCAAGAGCAGTATCGATGCCTAAGACAGATGGCTGAATTATCCACAATTG-TTTATCCCCCAGTTCC--AGGGAATGCTGACCTACAATTTAGAGCACTTT-CTCCAGAAATAATAGACCCA---ATTG----AAAAGCTATTTTTGTCTACCAAAATGTGTGGAAGAAAAAAATAC-AACAGTGTCCAAGA-----TTCTGGTGTTCAGTTATGATGATCAACCTGA--AAATATCAGTATAATTAGGTAAGACACATCCATTGTGAGCTGGTAAAAT---TGAGGCAGG-----ATTCTTGACACCCAATCTGTGGGTTCAGGGGTG-TAAATGAATAGATGTTGAGAAATAATACAAAAGAGCCTCAAGGAATTTAAAAAGGTATAATCTTATCTTTTAAACTTCTGTTTCT s bosTau2.scaffold2984 63061 809 + 94402 TTTTAACACTGTTGTAAACTGCCTGAGAATATGGACTACTTCTGCCCATTCCAAAGCCTCCTATAGAATATGTGGACAATAAATAGTGTCTGTTAACTATTTTGAAGAAGCATGTTTTTACAAGGCCTTTCATTTTTACAACCATCTCTTTAACTTTTGACACATGCCCATCCAATCTATGGACCTAGAGT------CCTAAAAAGAACTAAGAAGATAAAAAAAATTGTAAACCCATTC------------ATAGTAACTGTTATAGAAGTGCAGGACAGAATGAGAAGTGTCAGATGGCCTGCAAATGGCAGAAAAGGTAAGGAG----AGTGGGGCAAAGAGGGCC-CAGGCAAGGGTCAGACTCCCAAAGATATTTGGAAAACG-GTAAGAATGGACACAGGACAAACAGAAAGAGAGACAGATCGCACCAGCCACAAAGAACAATTTCGGTACCTAAGCCA-ATGGCTGAGGTGTTCTTAATAGATACATTCTCCTGTTTTAAAAGAAAATCTGGCCTAAAATTTAGTTTATTTTGCTTCACAGAT-ATAGTCCTAGGTATTGTAGTAAGAGCCAAT------GACACAAATTT--------AGACAATATGGACTCTGCCCAGGAATCCTTCCTTCCATCCAATTCAGAAGGCAGACAGGAACAGATATCAGTATCAGAGGATGAGACATGCAGAAGGTGTGGTGGGGAAGTGAGTGGAAAAGGGGCATATTGTTGA-----ACTTGAAGGGATCACGGTAGATGAACTAATAGATATTGATGGTAAGAACTATTGAGAACCATGAAGTATTCAAAAGTTACATTTAATCTTTGAAAATTTAGATTTT a score=9233 s mm7.chr15_random 315773 154 + 7075849 TCTACTGCCAGAATACTGGACTTGGAGGATCAGCAGTGGCTGGGCACTCATCAGACCAGATTGAAAACAGGGTGCCTGTTAAGGATCG-ATCAGTAAAGTCACCTTTA------------ATGTCCGTTTCCAGTGGAACTTCAGACCTCAGTGAACACAGATCTAT s bosTau2.scaffold3188 18892 167 + 88523 TCTTTTCCTAGACTACTGGACTTGGAGGATCAGCAGTAGCAGGTCATGCGTCAGACCAGATTGAAAACATGGTACCTGTTAAGGATCGCATCATTAAAATCACCTTTAATGCAGATGTGCATGCAAGTCTCCAGTGGAACTTTAGACCTCAGCAAACAGAAATATAT a score=9577 s mm7.chr15_random 315927 124 + 7075849 GTGGTACCAGTAGAGACTGCACTGGCATTTTATAAAGCTAAGAATCCTACTAACAAACCAGTAATTATAATTTCTACATATAATGTTGTACCGTTTGAAGCTGGCCAATATTTCAATAAAATAC s bosTau2.scaffold3188 20930 124 + 88523 GTAGTGCCAGGAGAGACAGCACTGGCGTTTTATAAAGCTAAGAATCCTACTGACAAACCAGTAATCGGAATTTCTACATACAATGTTGTACCATTTGAAGCTGGACAGTACTTCAATAAAATAC a score=16396 s mm7.chr15_random 316051 299 + 7075849 AGTGCTTCTGTTTTGAAGAACAAAGGCTTAATCCACAAGAAGAAGTGGATATGCCAGTGTTTTTCTACATTGACCCTGAATTTGCAGAAGCTCTGAGAATGGCGAATGGCGATCCCATTACTCTTTCTTACCCCCCCTCtttttttttttttttttttttttttGAAGCAAAGGAAGGGCACAAGTTTCCAGTTCCATGCTATAATT-AAAGTAGCTCCCAAGACCTGCTTAAGATTTCTGATTTTTGGAAAATCATGTATGTTGCTTTCTCAGGAGTATATTT---------TGAAACCTTTTATTTT s bosTau2.scaffold3188 21442 285 + 88523 AGTGCTTCTGCTTTGAAGAACAAAGGCTTAATCCACAAGAGGAAGTAGATATGCCAGTATTTTTCTACATAGATCCTGAATTTGCTGAAGATCCAAGAATGGTGAATGTTGATCTCATCACTCTTTCTTACAC------------------------TTTTTTTGAAGCAAAGGAGGGGCATACGTTGCCAGTCCCAGGCTATAATTCAAATCAGCAACTAAGTCCTGCTTCAAATTTGTGATTTTTAAAAAGTCATGTACCTTGTCTTCTTAGAGAAGTATTTAAACTAACATGAAGCCTTCTGTTTT a score=7413 s mm7.chr15_random 316691 396 + 7075849 AATTCTAAACCAAAATGTTATTCATAAACAAGTACAAAGTGAATTCTACATTCAGATTTAGTTAAATAAAGGCACTCA--TTTTCTTCC--------------TTTCC-----------TCATCTGTTTACAA-TGTTTTATAGTAGGATGATC--AATCTTAAAATATCCCATCATAGAAATGTCATGGTTTGTACTGGTAGCAATGTCTGCACAAA-GTAAGAGTCTACAGTTTAACCACTTGGCCT-AGTACTAGACAGTTTTCCTC---------------------------ATAATCATATTTTCCTGAAAT----CTTTAGCCATTGTCAGGAACAGCAGTGTTGGTCAGAAGTGTTAACTCTTCTGTTGAAGCTCC-------CAGTAGAGAAATGGTCTGTCCACTGAGGCTTT-CCCTGTTGGCAGGTCTTGTCTTTCAGGCCTC--AGCTGATCAGAG s bosTau2.scaffold3188 22444 445 + 88523 AGTTCTAAATAAGAGTGTTATTTATAAAGAAGTGCAAATTGACTTTTACATTCAACTTTAGGTAAATAAAGGCACTCAAGTATTCTTCCTGAATCATACAGTTTTTCCATATCAGGCTTTCACTTATTAACAATTATTTTGTACTGAAACAGTCTTCATCTACTCTTACCCCATCTC----TTGTGATGA-TTATAAATGTAggaaggcctgtgaaaacataaggtgctacatttaacctggttggcctcagtaccatgaatttttgttctgcctaagttttaagggaatatatgttacaaccaagttcttctgagataaagcttaagctgctgtcaggaacccaactg--------------tgaCTCTTCTGTTTAAACCTCATTAATGCAGAGGAAAAATG----TTCCACTGTGGTTTTGATGTTTTGGAAGGTC-TAACTTGTGGGTCTCAAAGCTGGACAGGG a score=16240 s mm7.chr15_random 317760 957 + 7075849 AGAGAACAGGTCATTAGATGCTCAGTTCATGTATCTGAAATAAAGAGAAGA---------------CTTTGGCCCATCTGCCATTCCTGAATGACTGGAAGACCACAGTTAAGCAGCAGAAAGACTGGAAGGTA--GTTCCCCTATGGTTACCAATGAGAAGGGAATAAGAAGAG--AACAGGTCATTAGAGATCAGG--CATCCAGTAATGTGTGAATAGGATAATGGGTGCAGAAGCA-----------------------CTAATGACGGCTTCTGTTG--TCCAGCTAGCTGGCATTTACTGCCAACCAGAGCCATAAGAGCTGCATTAAA----ATGACAAGGAATTTCTACTGATCATATGGTTTTGTTAGCATTAATACCTACATACCTAAAACCAACTTTTGAATTTCCATGCCTCA-----------------GAGCACAGAGATTGTATTTCATTAGTGAGCAC----TGGTTATCACTAGGTAATT-TAGAGGAATTTGGTATCGTATTAAAGCAAGTGTCAGACGTATGTGGTCCTTACAGAATTTCA--------TACAAAATGTGATAATTTCATTGTAATTATACGAAAGTTAAGGAACATAAGCTGGTGTCTTTTACCTCAGCAGTCACTATGACTTTGAGCTCCTTTCTGGTGGTAAGCATAAATTTCATGGTAAACAGCTCTGAATAAAATAAAAAAAAAAAGCCACCAAGGCAGA-----AAA--------TTACACATCAGTTTCAAAGTAACAC-----------ATTACCACCA-CTAGAAATAAAAATACAGGCTCTTGAGGGGAGGTCAGGCATCTTAAGTGAATTAAAACAGAGACCTTTAACCTTGAGCTTATTCTAACATAAAACAT----------CTAATGTTAGAGTCTTTGCTATGTCTTTT-CAAACCCAATTTATTTT-------TATTTTTGATTTAAAGGAAAACTATGACTCAAATTTGGGCAGTTTGATTTTTCTTTTTACTTCAAAGATAAAG----------------------CTCTGAGATCtaaaatatttaaaaaaaattttaGTCTGCCTTATTTAAC s bosTau2.scaffold3188 22925 1041 + 88523 AGTGAACTGGTCATC-------CATTTC---CACCTGGAGTAAAAAGAAGAGTCAATTATCTCCATCCTTTCCCCTTTCCCCAGTCCTTGATAAGTAGACAGCCACAGTCAAGTAGAGGAAAGGTGGGAATGTACTGCTTCCACACGG---CAAGTGTGAAGGGAATAAACATGGTTAATAGGTTACTGGTGGCTGTGTGCATTTATTAGTAAATAAATGGAATGATTAGTAAAGCAACAGAATCCAGACCAACCTAGAATAACAATAAATGGGTTCTACCAGTCCCAGTCACCAAGTATTAACTGTA---------CATAGAATACAAATCTGACTCTATTGCTAAGATTTTTTATTGATCAGCTGTTTTTGTTAGCATTAATATTTTTATACCATAAACCGATTTCTGCATTCCCAAGATTTATAATTTTTAGCTAACATGGTCACAAAGAATCTGTCTCATTGATCATTACAATTTGAGTGACA-TAGGAACTTGTGGAATAACTT-------CACTCATCAAAGTGTCAGACTGAGATGGCCCTTATAGAACATAAATAATAAATGTAGAAAGTGACAGTTACACTAAAATCATGTGGGATGTAAGGTGTGTGAGTTGAAGTCTTT-ACCTCAACAATTACTGTGACTTTGAGCTCCTTTGTGGGGATGAACATCAATCTCTTCATAAACAGCTCTG---------AAACAAATAAGTCATCATGGTAAATTGATAAATATCATGGTTATAGATCAATTTCAATGTACTATTTTGGCTTTTAACTGCCATCATCTTAAAGCAAAAATCTggtgccattttaggtgttgaggctatatcaataaataaaaacaaaggtctctgccctgaagctta---cattataAAACCTACTTTAGATCCTAATGCT---GCTGTTCCCATGCATCTTACAAAT---ATGTATCTTATATAACCATCATATAATTTAATGAGAAATATGGCTCAAATTTAGACAGCTTG------CTTTCTGCTTTAAAAAAAAAAAAAGCAAAAATTGTTCAGCTTTCCCTGG---CTTAAACATT---AAAAATTAATATTCTAGCTTATTTAAC a score=5791 s mm7.chr15_random 335257 493 + 7075849 ttttttgtttg-----ttttTTGTACCTAG---------TAGCACTCTGTCATTTTGTC------TTTTAGGCAGCACATGAGGGCAAGCCTTATAAAACAATACACATTAGAGTATTGG---------GTGCGTAGGTGTGGATGATG-TGCTC--GATAAAATAGCAGA-ATTGAAAACCTCAG------------TGACACTAACCCTTCCAAAAGACCTTCGTGTATGGTTATCTTCTTTAATCAT-----CATTGTACTGCACATTAGAAAAATCGGTCTGTGGGGGAAGTTTCCTGAATTGTAATTGGAAGCAGTCACTAGGCGTTAGTAAATGT---AAATGCATGCCTGCCTACAGAAAA----AAAGTCATAAGCTTACTTGTTATTCCAGTTCAGC-----CTCATGTATAGTTTCTTCAGTGGTCTC-----------------------GGTCTTTATTTGAAGTCAGCTTCAAGTTC---AGCTAGCATGAGCTCTTAGTGATTA-----------TATTACATATTTGAGCGAAGGCTTTTTAAAAAGAGGTATTTGTAATTCTGTGCctgcttaaaa s bosTau2.scaffold1164 231364 560 + 275359 TCTTTTGTCTGAATCTTTTTCTGAGCCCAGCGTAAGAATTAGCAACATAATATCATGTCATTTGTTGTTAGGCCACACAATGGAGCA-GATTTGTAAAATAGTCAGTGTGTGTGTATTGAAAACATGTAGTACGTGATTATTGATGATGGTGATATGGATAAAGGCATAGATGTTAAAAGACTGGGGAAAAAATGATGTGACACTA---------------------TTGTTACTATCCCCTTTAATCTTTCCGGCATTTTATTGTTAAATAGTATAAATAGGCAATGGAGGAGTTTCATTCAGTTGTAAATGGAAGCAATTGCTGGTGAGTCGTAAACTTTTAGAATTAATATCTGCCCTTAGAATAAAGTAAAGTTACGAGCCTGTTT-TTACTACAGT--AGCAGGTACTAGTGTG-GGTTTCTTTAATGATCTCTAGGTCATTAACTGTTTTTCAGTGTTTTTTACATGAAATCAACTTTCAGTCCTCTTGTTAAAATGAGCTCATAACACTTACAGTGGAAGCCCAGTATATAGTTCAGCAAAGAATTTTTAGGAC----TATGCGTTAT--TGTGCCTGCTAAAAA a score=16486 s mm7.chr15_random 336165 1549 + 7075849 GGAAGGCCCATTCC--TCAGGCAGAAATCAGTGAGCATCCTTCCCTTCATCAG---------TTCCCAGCTTCCGGGAACTGGCGAGCCTGTTGCCAGGGGAAATGGACTTG-------TTGCCTT-TGTTTGACTTGCCCTGGGAAGATCTTGACAAAGATCTCTATTCTTGTTCTGTTGA---------------------------GGTCTGATGAAGCATTAAGTAAAACTGTCAAGTCTGAAAAGATACTGTGTCCAGTGGCGCACGAGTCACCTTTACAAATGACGCTCATGGCTCCCTATGACACAGGTTGTACTTTTGAGTAATCACCTTGTCTTTGACAAACCATG-GGACTTCTTGATTACTGCAGTGTGGCACT-GAGCTGAGAGAAAGCTACTTTATATTAAGTAGACAGATC----CTATTTTGTTGAAAAGCAGTAACACTGCTGAATAGTGTCTG-------AAATTCCACATACAGAATTATTTTACTACTACTGGCATTTTTAAATTAGATGCTTCTAATGTGGAAGGGTTTAGATAATCAGGAACATAAACTGCAGGCAAACTCATAAATGTGAGTAGTATTTTTATTAGAGAGACACAACTCTGGGAGCATCAATTCGGGAAGACCTTCACTGGGCCACACAATGGAATCTGATCCTTCACATGGTTCCAGGGAACTGACCTCTGGACATATGGCCCTCATGCTCACCTGCCCTCACAGTGGGCCTTGTAGCAACTGGAACAAATTACAGAGCCACTTCAGAGA-CTGCAGGCGTATCGCACTGCAAGTCAAGGGGGATATTCAGGACATTGCTTGCACGTGTCTTTATTAAAGGTTACAGAGTGGATTCGGAGATGCACACATTCAGATCATGGGCTTGTGACTGAAGAAAatggatggatggatgggtggatggatggatggatggatggatggatggatggatggatggatggatggatATTTATGACGTGAGGGGATGACTGAAGTTGAATGGTTTTCTGTTATTTTCACGTTTCCATATTGGTGTTGAGCAAAAAGTCTGAGCATG--ATTTGGGTTGGATA-----------GTTTGGATTTTCATGAAAGCATTACTTTGTTATGGGAAAGCAGGGA-------------------------------------------------------GTCCTTAATAATTCTATTGGCAGGGAACATTTTAAAAGACTCT-------GCTTGCATTATTTAGTGTATTTTAGGAATGTGATTATTTCTGAGA------CTTCTCCTTTTGCGGTTTTTTCCCC-----TCCCTCCAACACTTTGCCTCCATTCTAAGTTATGAATGCTTTAAGTTTTCCTAAACACAGTACATATCTCACAAGTTTGACTTACAAACATAACAGCCC-TTCACTGCAGTTATTCCTGGTGCCTATATCCAGCAGACTCCATTCTGCCACACACAACCTGccatccccatccccatggccactcccaccctcacccctccctccctctccGGTCTTATGTGTCTTGGCTGGGTGACTTGGAGAACATTGT---TTCCCTTCATAAGTAGAAAGATGACTACCTGTCCCTGAAACGAACTCTTTGTGGCCAAAGAATGACCACCCCAAAGGCCATCATTCAAACACTGGCTTGAAAAACCCCCCTTAGAA s bosTau2.scaffold1164 232624 1375 + 275359 GGGAGTCCCATTTCACTTGGAGAGAAACCACTGAGCTTTCTTTCCTGCAGCGGAATAACAAAGTCCTAGACCCTGATGATTGATGAGCATGTTGCCAGGGGCAATGGACTGGAAAATCATCGCCTTGTCTTTTACTTGCCACAGGAAAGCCATAACAGAGATCTCTATTCTTCTCCTTCTGATAAGACGCctaacgaagcatcaggaaaggtctaacgaagcatcaggaaaggtcATGAAGCCTGGAAGTGTGTTACATCCCTCTGC-----------CTCTTAAAATCCGACTCACAGTTCCCTAACTCACAGATGGAACATGTATGCAGTTCGATAGCCTTTGACACACCATGCAGCTTTTTTGACCATTACACTGTGGCCTTTGAGCTGAGAGAG---TCTGTTTTAATAAGTACAGGTATCACCCCTGTTTAACCTAGAAATAT--GCATTTCAAAATA-TATCTGTGCAATCAGATTCCATATGTAGCATTCTTTTACTCCATCTGGCATTATTAAATTGGCTATTTATAGGCTGGAAAAACTTAGGAGCTCAGAAATGAAAACTAGGCCTAAATTTGTAAACGCAAATAATATTTTAACTAATAAGAAACA---CTGTGAG-------------AGGCACCCCCTG----------------------------------------------CCCCCAAGCACA----CCTCCTGCCCACTT----TCACGTAAGG--------------------------------CTGCAGAGAGCTGTGGGC--ATCACATTGCAAGCCCAAGA------------------TTTCATGTGCATTTGT------TTTCAGGAAGCCCTGAGAGATTCAGAC--TCAG--CAGGCAGTTGTCAC-------------------------------------------------------------------------------------ATGAGAGGGAATGTCTGAATTTGTTTGGGATTCCTGTTTATTGAGGTTTCCACATTGATCTTG-GCAAAAGG---GGACCCGTTATTTAGGCCGTAGGTTCTCAGCACTGTTTGAATTTTCATTAAGGTACTACTTTGTTGTTAGAAAGCATGGGCAGTGAACACGAAAAACAGACTCAGGTATACCCTGGATCAGCCGgccgagcctccttcctcatgacctttgtcatgagtggaatgcctcaccggctccccgcaCAGGTAGCCTTATATAGTATATTTTGGAAATGTGTTTGTTTAAGAGATTAGGGTTTCCACTTCCATGACTTCTTCCTCTGTATTTTTTCCAG------GCCTGCATTCCA----------GTTCTGAGTTG---GAAACATTGTAAACCTTTCCTAAATTATACTTATGGAAACAACAGCCCATCCCCGGGAGTTATTCCCGTAGCCTTTATGTACTAGAGGTGGGCTTGCA----------------------------GGCTGTTTCATTCTTTG------------TCTCCAGTCTTGTACTTCCTGCCTGAGTGACTTGGAGACCTTTGTTCATTCCATTTATTTGTAGAAAG--------------------CGAG------ATGGCTAAAGAATGA-TGTTCCTGAGGCTGCCAATCTAATGCTGGCTTTGAAAAGTCCTCTCAGAA a score=80436 s mm7.chr15_random 342589 1903 + 7075849 AAAAATGTGCATTTAAATAGTCCTATGTGCTCAGATCAGCCAGACCTGATCCATAGCAGAGCCAGTGTTGTAAGTGATGACAAGCCAAGGTTCATTGCTGATTATGTGAAGAGGGGAAAGTATGTCTTGCCAAAGTTGAGGCATATTCCCCAACCCTGCAAACTCTGTGACAGGCAGTTAATGAGCTTGAACTGAGGGTTCTTTTGTGTGTATGTGCTTGCATGTGCACTTGTACGTGGGAGAAAGAGTGAAAGAGATATCC-ATGCATAGAATT------CTAACCAGCACTGTGGTTGTTAGCTGGAGGCAAGAGATATGGCAGCTCCCAAGCCCTTCTGGA--AGCAGCCTACTAACAGGAGGCTTCTTTGGAAACTAGTCTCACATAGCTCCATCTTGCCGGAGTGAAGGT-TCCTCCAAACTTACACCTTAGGAGTCCTTATGTGAGATGTGCTTTGTGCATTTGAATTACTTTAGAAATTGGAGCCCTGCGATGTACCACTCAGGAAAATAAATAGTCATATTAACTCCTAGCAAATGCCACCTCTTTGGTTTGAATTGGTTCAGAAAGCATTTTCTTTCTGGTTTGTACACACCACATTGTTCAGGCTCTTCTCATCACTGACCAGCTGACTTGTCAGTGAATAGAGCTGTGGGCCCTTCGCCATGTTTCATGTGGGGTTTTGGCTGGGTGGCAAACAGGCAGCCTGTAGCCAGTGTCAGCAATTCAGGAGGAATTGGCACAGCAGGGTCCCCATTAATTTCTGTTTGTCACATGCTGTCATGCAAGTTACACCAGAGAGGAAATGACCATTTAAAAAAAAAAAAGGTACCCTTGTGGCATTGGGTCCCCTCCAGATG-TCCCCGAGGTTAAACAAGTGGATACAATTAGTTCTACACTGACAACTGCAGGGAAGGGAAAGCCTAGACCAGGCCCCTCAGCAATGTGTCTGTGCTGTTAGTGTGGAGTGTCAGCTGTCAACATCTGCCATATTTTAACCCTTCAAAGGAACCAGTAAATTAAGGGAAGCTATTATCCCACCCTCTGTTGATCATTATTGATCATAGTGCCTTAGAAAATCACCTCAGCGCTGCCCCCTCAGTAGCAGGTT----------------------------------TTTATGTTATTGCTGGGAGCTGAGGA-AGTGGTGAAG---CATGGTGTGA-GGGAAATGGGCTCTTTAATCGTTGATAATTTACTGCCACATGGAAAGGGCACT----CAGCAGTTAACTCTTTTGCAGTTCAAGCTGGCATTGTTAAAATTGGTGG--------TAGCTTCCATTTCCACAAAGATCTGTCCTGCTGAC-------TGTCAGTCCCTCTTCACC-AGGACCTGTGGTGGTTCTTACAAAAGCACAGAAGAGAGC-TGTGGGGAATAAGAACCAAGTTCTGAAGAGAAAAGTCATTGACGATGAGAGACAAAACCCACTATAGGATAAA-TAGAAGCTTCCAGAAACTGTTACTGT----GTTTTCTAAAGATTGAAGAGATTAAGCGTCTGTGACCTGGAT-GAGCCCTGTTCAACCTCTCTGTAAGCATCTAACTGTGC-TGGGAGAGGATCAGTCTGA-GGAAGTCTGATTCCTGGCACCCA--------TGAGTGAGA----TGTGTGTTAAA------CTGTTGAGACACACTCCTTAGCTCTAACCACTAAAACTTTCAGAGGAGAAGGGGTAAGAATGGTTTCTTGCCATATTTTAACTCCATGAGGACATGGCTTTGTAGTTGTTAATTTAAAACTT---CAAAAAAGATACCA-TTTGCTTGGGAATGTGCAGAT----------GGCAGAAATTCT-------TTTAAAAAGGA-AAAGAAAAGAAAATCAATAAGATGCTTATTTGAATGTTTGC---CTTACAAGGTGAAACACTGAGAAGGCAATACTTGAATTTCACTGGGTTTCTAATGTTTATTACAGATGACT-TGACACCACTTAAAATAATTTTAA s bosTau2.scaffold1164 234704 1976 + 275359 AAGTATGTGCCTTGATTTGTTCTTCTGGGCCGAAATCAGCATGGCCAAGTCTGTAACAGAGACACCATT-TAAGTGCCCACCGACTGAGCTTGAATCCTGATTACAGAAAGAGGAGAAAGCAAATCTTGCCAAGATGGGGGCAGATTCCCCAACCTTGCAAAAC--GTTGCAGAGGATTAACGGGCTTGAACTGGAGATTCTTTTGTGCAT--------------GTACTTGTATATGTGAGAAAGAGGGGAAAGAATACCCCATGCATAGAATTTTTAAACTGGGCAGCCCCATGGTAGTTCGCTAGAGGCAAGAGATA--------------CCCTTCTGGCTCGTGGGCCTATTGGAA--AAGCATCCTTGGAGACAGATCTCACGTGGCTTCCTTGTGCCTGAAGGATGTTCTTCCCCGAGCTTGTACCTGAGAAGGCTTTGGGAGAGGAATCCTTCTTCTACCCAAAGTACTGTGGAGACTGGGGTTCTGCAGTTTGCCACTCAGGGAAATAAACCGGCATATGAACTCACAGCAAACCTCACCTCCTTGGTTGGAAGCGGTTTGTAAAGCGTTTTCTTCCTGGTTTGTGCGCTCCACATTGTTTCGGCTCCTCTCATCACTGACCAGCTGGCTTGTTGGTGAATAGAGCTGTGGGCCCCTCGCCATGTTTCATGTGAGGTCTTGGCTGGGTGGCAAACAGGCAGCCTGTAGCCAGTGTCAGCAATTCAGGAGGAATTGGCACAGCAGTGTCCCCATTAATTTCTGCTTGTCACATACTGTCATGCAAGTTACACCAGAGAGGAAATGACCGTT--AAAAAAAAAAAGGTACCCTTGTGGCACTGGGTCCCCTCCAGACGTTCCCCGAGGTTAAACAAGTGGATACAATTTGCTCTACACAGACAGCTGCGGGGAAGGGAAAGCCTAGAAGGGGGCCCCCAGCGATGCGTCTTTCCTGTTAGCAAGGAGTGTCAGCTATCAACATCTGCCATATTTTAACCCTTCAAAGGGACCGGTAAATTAAGGGGAGCCATTATCCCACGCTCTGCTGATCATCATCAATCATAATGCCTGGGGAAATTACCGCAGCGCTGCTGCCTTGGTGGCAGGTTTTGTCCTCCCGGGCAGTGTTTTTTTCTTTTTTCGTTTTTGTTTTTGCCGGGAGCAGAGCAGGGTGGTGGGGGCAGAGAGGGTGAGGGGAAACTGGCTCTTTAATCGTTGGTAATTTACTGCCCACAGGGAAGGGGACTAGAGTGGCAATAAACTCTTCTTCGGTTCAAACCGGAGTCATTAAAATCGGTGGACTCCAGACGGCTTCCATTTCCAAAGAGATCCATCTTGCTGACTGACTTTTGTCAAGCCGTCTTCTCCGAAGAGTGATGGCGGCTTTTAGAA---CACAAGCAAGAGCTTTTGGGAAATGAGAACCAGTTTCTGAGGAGAAGGGCAGTCCAAGATGAGAAAAGAAACTCG----AAAATAAATTAGAGGCTTCCAAAAACTGTT-CTGTTTTGTTTTTTTAAAGATTGAAATGATTAAGCTGCTGTGATGCAAATAGAGTCCTGACTAAC--CTTTGTAAGCACAT-TCTGTGCTTTGGGGTAGATTTGTCTGGTGAAAATCTGATTGCCAGCATGGAGGGAAGGGTGAATGAGACAGTTGCATGTGAAATTTTGTTTATTAAAACTTACTCATTTGGGCTCATCATTAAAACTG--GGGGGTGGGGAGGAGAGAACGGTTCGTTACCGTGTTTTAACCCCAACAGCTATTGGGTCCGTATTTGTGTACTTAGGACTTTTCTGAAAAGGATTCCATTTTGCTTGAGGACCTGAGTATTTCTCTCTCAGACTTGAGTTCTGACAGTGGTCAACCAGGATGAAGATAGGAGATCTGAGGTGATGCTCACCTGTGTGATTGCACACAGACAAGGCAGTGAAGGGAAAAATC-ATCCTTGGATTGTCCTGAGTCCTTAACA-TTACTACAGAAAATTCTGGCACCATTTAAAAGAACTGTAA a score=342 s mm7.chr15_random 344642 67 + 7075849 GTGAGGACAAGAGAATTCCCCTGGGAGGCTGGCCCACCTGGGGTATACAAGTCAGCCGAAGCAAGAC s bosTau2.scaffold1164 236680 44 + 275359 GTGAGGGCTAGAAGCT----------------CCCATCAGAGTAAT-------AGTAGAAGTAATAC a score=58904 s mm7.chr15_random 344846 2016 + 7075849 AAAAGAACTTCTATGATCACTAACCAATGAGGTTGG-GGTGTTATCAGAGATGAGTGTCAAGGCTGGTCTCATCCTGTGTCCTCATCTAGTCTGAGAC-----TCTCATAGGCTACAAAGCAGTAACCA--GGGA-----------------GGTAAGG--GACGCAAGGCCCTATGTGCATCTCCACAGCTGA---GTCTATATATCCCAGTG------------ATGGCCAATCCAAGCAACCACAGA-----------------CTGACAGCAGGATATAAGGAGGACCC--------CCAGACCTGGAGACATGCAGCCTTCCTCAGTCA-GTCAGCAGT-GGCTTCTCCTGTGATATCAGGATGTGTGTTTATAGTAGTGGTTCTACTTGCCTCTGTGG-AATAAGAGTCACTTGTTTCAGAGACTGATTGATAATCCTGTCCAATTTTATCTATGACACATAATTTTGACATTAAATATCAGGCTTAATGTTAACATCAGGGTA--TGAATATGGAGAA-------CCTTGGTGTGTATTTAAAATCGTTTAAACATTAGACCACAAAGAAAAATCATTAAATGTTTCTATATCTGAGCCTACGTAGATATGTGCTCCGTCCCTAACTAAGGGGTCTCCTTG--TCGTGTAGATGGATAGACTATATGC-AGTTTTTCTATTACTCATGTTCTTAAGCTCTGATTTTGGGAGGATAAGCAGTAATTGGCTCTGAAGTCTCTGAGCTTA-CTG--TACTAAAG--CCTGACTTTAATACAGTAATAAAAAAAATCACAACCCGATTTTCAGAAATGAATTCATATAACATCAAATGGGTTCTTATTTTAGTTAAATATGAAAACAGATGGAAAATAAATTTGTAATGCTTTCTTGCTGTTTAAATAGGTTGGTTTTTCTCAGAATTCTTGCTTAGGCCTGGTGTTAAGATCTGTCCAAAACAGGCTAGCTGTAGAGGAAGCCCTTACCTGCAGGC--TGTGGACTGTAGAGGA--ACCGGATGTTTGGAAAGGGCCACAGGAGAGATGATCCTGACTGAG-GAGCAAGGATGAGCCAAGTAGACTAAGCACCCTGACGTGGACTTCATAGAAGGCCCCCAAATCGTTACCAA---CTGTGGTATTCAGAATAATAACATCAATCACAGTGAGCTGCTCCAGTCATCCTGTGTCC---ATATGCAACTCCATAAAGATTCTCCCGGTTTGGGCATTAATTAATAGTGACTGCATTTTACAGAATGACTGATTTCATTGAAAATACTTGTGTTCAAACATGTCTGTTCAGGACT--------CCCTCCTAGCATTCATTAG-GTTTATAATTGCCAAGTTTTCATGGGAAATGGTGGTTTCTCCTTTTAAGTCCTGAAGTTTCGATGGGATTTGATGTAGCGTTTCATTTCATTTCAAGTTCTAATGACTCGCTACATTCTTTCCCCCAGAACTTACCCTCTGTTTACCCTCAGAGCATGCTCTCATATTGACACGAGCCTTGGGAATCAATAAGCATGACTGTATTTATGAACAGCAGAACACTTCAGCCTCTT--ATGCCGCTAGGAGAC----------------------------------------------------------TGGACTTGGCTTT-----------TTAAGTTCTGAGGGAATCTTCTCACATGCGAAGGCTCAGATATTCTTCTGCAGTTGGGGTGTAGTATAGT-GTGACTTTATAGATGGAGGCATCTCATATT----GATCACTAATGACTTGCCCAAGTTCACACAAGTTAAGAGCCAGGAGGTAAACTTTACTCTTGCCCAATCTATTAGGCTGTTTTCATCTCAGCCCCTATAGTAGAATTAAATATAATT--CATATTTTTGTCAATGTGCTTTAATGAGTAAGCCCCATTTACATAAATATTTTAGCATTTTCATACCCTCTGGGCCATTACAGTAATTTTATTTTCATTATTGTAATTATTAT--GTTTCTAAGTG---------AGAAATGAAATGAAGAGAGACACAGTAAATTTTATTGTTGTTATTACCTAT-GTATCAGTGACAGGATTCTACAACAAAGGCTGTTCCTTAGCTCTTGGCTGGCTGTTTCTTTGTGCATTCTCTTTTCTTACTATCTCTGAAGTTACATCTAGAGTTAGGGCAAACATTTTCTGACT s bosTau2.scaffold1164 236761 2127 + 275359 AGAAGAGGTGGTGTGATCACCAAGGA--GAGCTTGGAAGTGTTGTCAGCCATgaatgttagagctatttcagtcctaaggcatcat-tagtccgagaccttaattttctagattaggtaacgg-aaccaccgggaccggtccaaaacctcacagtgaagcagaggcagaactCCAGTCTCTCCTTCCCAGGTGAACTGTTCATATCATTCGATGGGCTGACTCAGTAGAGCCAATCTCAGCAGCAACAGATAGGTTCCCTGGTCTGGTTGACAGCAGGGAGTAGGAAGGAACCACCACCAATCTGGGCTGGAGA----TCACTTTCTTCAACAAGGGCCGCAGTCAGCTTTTGCCACGACGTCAGGCTGTGAATTTGATGTACCAGTTTTCGTTGGCCCTGTTACAGCAAGAGATTCCAGTGTTAAAAAATGGTCT----TCTTGTCCAGTTTTAAGTAT---ATGTAGAAATACCTTAAAGTATT--TCTGAATGTTAATTTCAAGATAATTAGATTTAGAGAAAATAACTCCTT--TAGGTATTTATAACTTTATAAATATTAGATCGCAAAGAAGAGTCAGTGA---------------AGTATACGTAAAGGTGCAGT-AGTCCCTAACTCTGAAATCTCTTTTTCTCTTGTAAATG--TAGACTACATTTAAGTTTTTCTATTCCTCAGACTACTGAGCCCTGATTTAGG--GGGTAATCAGTGAT---------GGTCTTGGAGCTTAGCTGAATATTGAAGTACATAATTTTATTA-AGTCGT--TAAAAGTCACAATTTGATATTCAGGAGTGGATGTATTCACCATAAAGTAGATTCTTAGGTAAGTTAAAAACAAGAACATAGAGAAACTAAATT----GTAGCTTTTGGTTGCTTAGA-------ACTGTTCT----ACTGTTTCTTAGGCCTGATTTCAAGATCTAACGTACAATGTCGGGCCTCAGTAGGAGCACATACCTGAAGACAATGCAGGCTCTGGAGGAATATCCGATGATTGGAGACAG-AATAGCAGAGAAAATACCAATTTAGTGAACAACAATGAGCCAATTAGTCCAAAAACATTGGCTCGAATTTCATGGGAAGGCGCCGGGTCATTACTAACTCCTATGGTATTCAGAATCATAACACCAGTCACGACGAACCACTGTGGTAGTCATGTGTTCATAATATGGAATTCCGTAAAAATTCTCTTGGTTTTGGCATTAATTAATAGTGGCCATATTTCATGAAATGGCATATTTCATTGAAGACACTTGCATGTAAACACATCAGCTAAGAACTTGAAAACATTTTCCTAGCATTCGTTAGAATTTGTAATTGCCGAGTTCTCATGGGAAAAAGTAGTTTCTCATTTTAAGTCCCGAAGTTTCGATGGGATTTGGTATAGCATTTCGTTTCACTTCTAGTCTTAATGACTCACTGCATTCTTTTCCCCAGGACTTATCCCCTGTTTACCCTCAGCGCTCTCTCTCATGTAGACACAAGCCTAGTGAATCAATAAGCATGACTATTTTCATGAACAGTCGTATAGTTCAGCACCTGCAACGCCATCGGAAGACATTATCCAATGTGCACGTTTCAGAAAAATGAACATTTCTTATACCTTTATCTCTTGGTTGAATTTGGGTTTTTTTAAAAAGATTAAATTCTGGGGGAGACTtgtcaaa-actgagcctgagacattgtctcagagttgagaagtagccctgtcctcgttttacagatggaggcagctggcaccaccagctcatgagtgacttgccgaagttcacaggagct-agATTCGGG-----------ACTCTTGCACAATCCATTAGACTGTTTTCATCTAAGTCATCGTAATGGaattaaatataatttatatatCTTTGTCAGTGCTATTTAATGAGTAAGTCCTATTTACATAAATGTTTTAGCATTTCCATGCCCTCCAGGCCATT--AGGCAATTCatttttataattttaattattataaGCCTCTAAGTGTATAAAATCAGAATCAAAATGAAGACAGGTACGTGTAATTTTATTATTGTTAAATCCCATGGTGTCAATGATAGGATGC-AGAAAGAAAACTGTTCACTAGATATTGGCTGCTCAGTAC---ATATATTGTGTTTGTTTAACACCTCTAAAATTATATTCAGAGTTAAAGAGCATATATTCTTATT a score=8763 s mm7.chr15_random 352268 493 + 7075849 GAACACAGCTCAGTCCCAGCTCGAGCTG-------GAAAAGTTGACAAGGTTCATCTATTGAGACCAAAA------------AGTTAGAAA-GCCAAACAGAACTGAGGCAGTCATTGTCAACCTCCTCTGGAAGTTGTTTTCTAAGGCTTGAAAGCATACTTGAAGTACAAGTCATTGAAATTATAAAATGTCCATACCT-GCATACAACTTGGGGT-TTGTATATTTCTGACTCCTCACGTAACATTTATGGAAGTGAATCCTGGATT---GATTGGTAAGCTACTAGAAGTCCTACAGTTATCCGGTTATCCGTAATGTTAGTTCTAAA--CTCGGCAT-CTGTTCTAGACATCAGACATTCTGTAGACCATA-AAAGGCAGTTTTGTTCCCGTTTCCGTAGGATTGTTTTCAGCAGTAAAGATCTGTACCTAGTGTGATTTGTTACTGGCTAGAAGGACCCGCTATACTTAACTTGCACAGTCCTCTGAAAGCAGTGTTAATTTTGATTTTACTTTTG s bosTau2.scaffold1164 240398 503 + 275359 ggactcCATTTAGAGCCAGTTCAACTTGAAATCTTGAGAAGTTGACAAGGTTTACCTAGTAGAATCTAAACTAGGTTTACCTAGTTTGAAGTGTC---CAAAACCAGAAGAATCATTTTTAACCTACTTGAGCAGCCATTTATAATAGCTTGAAGGTATCACTTATATACAAATTAGGGAAATGGTAAAATTTTCAAAATTAGAAAATACCTTGGAATGTCGTCTA-----GACATTGGACATTACGTTTAAGGATGTGAGTTAAAAAAAAAAGATGAGTAATGTGCTGACAGTCATGCAATT--TGGACTAGTCCTAGAACTGTATCCCAAGCCCTGGTATTCTGGTCCAGG----GGGCTTTCCAAAAACCATATAACTGTGGTTTTGTTCTTATTTCTA----ATTATTCACTATTTTAAAGACCTATACTTAAAACATTTTGTTGTTGGTTTGGATAAGTTACTGTACTTA-CTTGCACATTCCTCTAAAAGCAGTGTTAGTTTGAACTTTGCCCTTG a score=4772 s mm7.chr15_random 353007 263 + 7075849 GGAGTTTCATGCTTAACATTGTATTCTGTTCCACGAGAACCTTGTTCTCCATGTTGCTCTTTGCCTTCCTTCTTATACTG----------------TACATATCACG--------------GTGTGTAGTCCATATAAT------------TATTTCCCTGGCAGTTTACAGC-CAATCCTTTGTGCATTT-TCAGGTAAAGATATACCTGAAATCAGCACGTAGTTTTAATTGAACCCCACAAACATTTGCTAAGCATCTTCCTCATGTGACACACCATTCCAGCATGGCACTAGAGAGGATTGAA s bosTau2.scaffold1164 240946 295 + 275359 GAACTTTCATTCTTAACATTTTATTCTCTTTAAATACAGCCTCATTCCACATGT--ATTTTTTTTTTTTTTCCTCTACGGAGAGTTGGAATTTGTCTACCTATTTCATTTCAGTCATGTTCATGTGCTGTCAAAATCCTTGTCCCTTATTCTATTTTCCTGGTAGCTTCTTGCGCAACTACTTACATATTTGTCAAGTAAGGATATATGTCAACTAAGC----------Tattcaatccaataaacgtttattgcacaccttctgtatgcaaagctctgtgccatctcaggactagagagaactaaa a score=5702 s mm7.chr15_random 353378 625 + 7075849 AGACATTCCCTGTGAAACACATGACAATTACCAAGGG--------------CCGAAAGGACCCAAGTGCAGGTGGCCCCATGGCAGTGAGAACCTCACTTGCAAACCCCGC----AGAATTTTAGGGCTGGCTTCAGACACTGGCTTTTAGTTTACTTTCTCCATTGATCTTAAATTAC-AGAATTGCCTTACAACGTTTGTCTCAGGAGACCTGAATTCCATAGGTCCAGGAGAAGAATGGCTGG-----TGGGGTTGTCGTACCTACACTCAGTAGGTACGACAATCCCTCAGTA--GGATTTCAGGATGCAACTTGTCCACCAGATTATAGTAAACCATAATATCGTTTGATACTCCCATAATCCAAAGACCCAGAAAGCAGTGTCTGCATATTTCATTT-ATCTA-TTGATGTGGTGAAAGCCCCTGGCAACATGACACTTGGTTAC----------TCATCtgagcaagttgcttaagctccttgagcttcagtttcattatctg--GAGAGCAGCTACAAAGGTGTGCAAGTCAGAGACACTG----------TTTTGTGCGTAGTCCACTGCCCTGGTGAGAGAAGGCAT---------------TGTATTTTGTAGTTCCTC----------------------------------------------------CCAGT-------------GTTTCAGATGAGAAGACCTTGAGAGTCA-------------------CAGTGCTCTTCCAGCAATCTCTCTCAT s bosTau2.scaffold1164 241831 737 + 275359 AGACCTTTCCTGTGAGATATATAAAGGAGGTGAAGGAGGTGCAGGAGGGGCTCCAAGGGTCACAGATGCACACAGGATTAAAGGAATGAGAGCTTA----GCAACCCCGGCCTGAAGGATTTGAGGTTCGGCTTTGGTCCTTGGCTTGTA-----CTTTATGAGCTGATCTTACATGACCAAAATCACCTTGCAGATTTCATGTTTTCATTCATTAATCACACAGGT-----------GTGGCTGGGGACATGGAGGAGGGGAACGCACA-TAATTATGTAT-----TTGCTTTGTATGGAGCCTTAGGAAGCAGCGCCTC-AGTGGATTTGGGGAAGTGCTAACATA--CTGAAA-------GATCTTACAGTTCAGGAGACACTGTCTGCTTATTTCATTTTATTTAATTGTTGTGGAGAGAGTCCGTGGCATCAAGATTCCTGGTGACCTGAGCCAGgtgacctgagcaagacacttagtttctttgagcctccatttccttatctgtaaaaaacaaagattaaaatgtgCAAATCAAATGAGTTAAAAATGTATATTTTATAAGCAGTCCACCATCCTAAAGACATAAAGGATGTAACTGTTCACCTGTGTACTTTCCAGTTACTCTCATGTATACTATTCTAGTTTTAAAAACGTTTCATTTTGCATTGGGGTATAGCCAGTTAACAATGTGACAGTTTTAGGTGGGCAG-CTAGGAGACTCAGCCATACATGCATATGGCTCCATTCTCCCCCAGACTCCCCTCCCAT a score=17118 s mm7.chr15_random 354064 711 + 7075849 TTTGGTGTCCATAAAACCTGTTTTCCTCCTGGCCTGGCTCTCTGTTCTATTACTTTCTTGCTGATAATAT--ATGAGTTGTCTA---AGTTGCTATTAAAAGT---------CTTCAGGCCCTTTGAAAGGTCAATCCTATAAAATTTTAT-TATAAAGTGTCTAAATATAGAACACACAATATGCCATCGTAAGTTAAGGGAGCTCATGTTAAGAATTTTCCACTGCACACTGGAACA-CTCAAAAGTAAAATCCTCGGGAATGACATAGTCTACTTAACATCTGTGCA-CTTCCCTCAAATTTTACTCGT-GTTTCTAGGTGACACCAGACCAAATTGAAATGCTA-CTTTTAAAGTATTCTAAAACTTGATATTTTTAAAAATGCAGCAGCTTTGATTATGGGATGTTTTAATGGGAACCATGTAATTCTGT------------TCTAGATTTACACCTAGTTTGTTCTGTAAGCCCTT---CTGCAGAGTGTTGGTACTGCCTATGTTGGACCATGAGCTTATGTTTCGAAGTAAGCCCACCTTATATGGAGATAGTATGAAATTGAGAGGGAAAAAATAGAGCACACAGAGAGAGGAGTGGGTGCCACATGAGCCCAACCACACAGACATTAGGTGATGCTGTC-----------AAGGGCAAGTGTAGCAGGGACAGCAGACTGGGAAA---CAGCACCAACTTTGGGAAGAAAGTGGCAGTGTTGAAGGACTTTGACGATAGTAAACAGAAA s bosTau2.scaffold1164 242628 701 + 275359 TTTGTTGACCATAAAACTCCTTTTGCACTT-------CCTTCTGTC---------TCTTGCTGATGATATTTATAAGTTATCTCCTTAATTACTATAAAAAAAAAAAAAAAACTTCAGATTCTCTGGAAAGTCAAATCTATCAACTTTTATCTCTGAAATTTCTAAGTATAGAACACACAATGTGTCATCAT-AGTTTAAGGAGTTGATTTTACTAGTTTTCCAATGTGTACTGGTGCAGCTGAGAAGTGAAAGCCCTAGAAATAATATAGCATATTTAACATCTGTGCATTTTCCCTCAATTTTTAGTCATGGTTTCCTGATGGCAGCTGACCAAAATGAAATGGTATTTTTTAAACTAGTCTAATATTTGATGTACTT-CAAATGCATCAACTTTTAC--TGGCATGCTTTAAATGGGAACAAGAAGACCTGTCTACTAAAGAAATATAGTTTTGTATCTAATTTATTCTATAAGTACTTGTGCAGCAGAATGTGGAAGCCA-CTATGCTGAATAATGTG--GATGTT---ATATAAACATAACT--------AATAGTTTAAAATCTAGAAAGAGGAAATAAAATATCT--------GAGTAGTCATCACATA-------------AGGCAGTGTATGACAGTGTCCTGTGTCACAAAATGACAAAGGCTGCAGGAAT-TCAGA--GGGAAGACCCAGGACTCACTTCTTGAGGAAAGTAGCAGTTGTATAGTATTTTGAAGGTGCTACTCTGAGA a score=5625 s mm7.chr15_random 355019 316 + 7075849 GGGGAAACTGGTCCATCAGATTGGAAATGGGAGAAGGTGGGT--TGGTATGAA---TTTGTCTTTATTGAGCAGTGGAGAAATGAAAATTATAAAGAAGGAGTTGATGGGACCTGGTTAGTTATTCTTTGTCTGGAGGCAAGGCAAATGGAGGTAATTAGAGATAAGTA--------TTGCTTGTTTAAGAAAGAGAGCGG-----TGATTTGGTCTTGTGGAATTAAGCCTAAAATGGAAAATTATGTATGAGGGTACT--------TTCTG---------GCTTAGCTCTGAGAACCTTTTGAGGAAT--TGGACTCTAGGAAAGA-ACCCACATCCTGGAAAAGGGGAATG s bosTau2.scaffold1164 243587 344 + 275359 GGGGCCGCTGCTCCAGTAGTTTGCGAATGAGATAACCAGGGCCATAGTACAGAAGGAGCATGGTGGTTAAACAGCAAGTAAGGAGAAATTGTGAAGAAAGAA-TGAGAGGACTTGGTTACTCATT---------GAGAGCAGAAAAGGAGAAGCTGAAATAAATAAGTAGAGAGCAGTTATCAGTTTGGAGAAGAAAGTGGTTGTTTACTTTAGTCTTGTTGAATTTGTcccagagtgagaaattatatctgagggcattgcaagaacttgtggctgcaatagctgagccccaggtaacctttgaggattcatggaatttaggagaggtgctaaaatactgggaatggaaaatg a score=5507 s mm7.chr15_random 356152 333 + 7075849 GTGCCTGTGTGTGAGTGTGTGTTTA------------GAGAGATAGAAATGCTACATTCCTCTCAAATACAGCATAAAGCACAAAATAAAGACAAGCTATATTCAAGTGTAAACTATTTAAGAAATGCCATTGAGCGTTGT-----GCAAACCTGATCAGTACCTGAGACGACCCCAAACCATGAATTGAAAAGCTTGTCTGCTTTTGAAAGGCCTAAGACGCCAAATGGTTAAGAAGCTTCAG----------GAAAGACTGTGCATGCAGGATCCAGCA---GCCAGGCATG----------CAGAAGTAGTCAACAGGAGATAAAACCACTGTTGCTTGCTTCAGCTCGGCTGGCTGGGTTATTCATTTG s bosTau2.scaffold1164 247076 348 + 275359 gcgcatgcgtgtgtgtgtgtgcgcgcgcCCGCGCGCTGGGGGGTGCAAATACCATATCCTTCTTAAAAGTACTATAGA-TATAAAATAAAAGTAAACTATATTGAAGTATAAGCTAGTAAGAAAACACCAGTAAGCACTGTTAGACACAGGTCTGA-CAGAGTCTGTGGTGACCCTAAAATCTCTCTAGAAA-------CTGGCTCTCA---GCGTTACAGGCCA----GTTAAAACACTTCAGAAACCATTTTGAAAGATCATGTATGCCGATTCCAACAAAGAACAGGAAAGAAACAGAGACTAGAAATAATCAA-GGCAGATGAAGTC-----TGGTTGTGACGGGTCTGCTG---TGGTTGTttagttg a score=3298 s mm7.chr15_random 356534 118 + 7075849 TGTTTAATATTGGGGATTTGTGCCTGTCAGCTTTTATGCATTTTACTCTTAGCAAACAGAA-GTTCAAAGTTGCTGTGAAAAAGCACTATCTGTTTGGCTTTCATTTTG------AAATATTCTA s bosTau2.scaffold1164 247640 124 + 275359 TATTTCATGCTAGTTGTTTTT-CCTGAAAACTTTTAAGCTTTTGATTCTCAGCCTAAAGAAAGTTTGGGGTTGTTCCAAGAGGGCATTGTTGATTTAGCTTTCATTCTGTTGATAAAATATTTCA a score=8803 s mm7.chr15_random 359274 893 + 7075849 TGGGGTTTTTTTGGGGGGAAGGGTTTTTTTTTTTAAGTGTTTTAAGCAAAATAGCACCAAGCCTTTCTGTTTTGACCTATTATAAACTTGATCTGTTGGGTCTGTAGGGTGAGTTTCCAGAAATAGAATTACTGAATCACAGTGTATTTTTAGACC----TGCGTTCAATTCCCATGCACATGTATTAATGGGTGGAAAGATTGATTGATATTTTTCCCT-AGCATTGGAGTCACAAGGCCAGGTGCACTTGAGGCACAAGTTCAGGAGGTACCCAGGCTTCTAGAGGAGTGCAGTTCTCAGGGTTAGGCTCCTTCCCTGTCCTTTTAGGTCAGCTT----TCCCCTCCACTACTCAGTTCA--ACACTCAATGCTCTTGTTCTCC-----AGGACAGTTTCTGTCCACATAACTAACACACCTGTGACACAAACTTAGAGTG------------------AATGAGTGTCTGGAAAATAGTAACATAGGCAGAGTCCATGTGGAATGGCTTGGTG--------------------------------TCCCCACCCTACT---------GTGTCCTTACTT-------------TTTCGT-CAAGGAAGGAGGTACTGTAGTAACAGGACAGGCACATAAGCTCTGGGCCAGTGCTGCCTATGCTTAGAGGGCTGTCTGCTTATAGGGTAAGGGGGGG--GGGCTGCAGTCTGTAGGTGTGGAGAGAATTGTCC---------CCAAGCCTTGCTGAAGGAAACCCTC---AAACATAAGGTAGAGGCAGACAGGACACATGGATTGGAAGATACGTGCTTGTTGGGGGATATAGTGATGGAGAAAGCACTCTAAGAAAGAGAGAACAGTGCCACAAAAGGAC--------CAAAGACCATGTCATCCACTGCGGTTAATAAAAGAATCAGGAGAACAGCTGGAAACAAAGACAGTGGTCATTAGAGACCAGACGATAAAGTACTTGAGGTAGCAGCTTGTTT s bosTau2.scaffold1164 250688 892 + 275359 tggggttttttttgttg--------ttttttttttactctttcagacaaaatagcgttgacccact-tgtattgacttactctgaact-gtgctgttggtcctgttgggtgaattcctagaagtggaatcgctgggtcatagCACATTGTCAAAACATGGTTTGTTCATTACC--------------------------------TTCAGACTGTTCACTGAACGGCTGAGGC----GGCCACGTGCACGCGGGGTGCCTGGTCGGGTGGAGCC-------------------AGCCCTGGGTGGGAGGCTCCTTCC-TGACCTCCAGAATCGGCTTCCTTTCTGCTCCACCAGGAGGGCCGTGAGACCAGGCACTGTGGTTCTCCGGCCGAGCACAGCGCCTGCCTCCAGAGCTGGC----CTGGGACACAAACTTAGAGTAGTGACTATGAGTTTACTCAAGGGGTGGCTGTGAAAT-----TAAAGAAATAGTGTATGTGGAGCGCCTGGGTTAAAAAACACACCTGTAAAATGCTCCTTTGTTTTTCTCACTCCACTTGCATTTCTAGGTTCTTCCTTAGCATCGAGGGGCTCTAGTGTGGGGAGGAAGACATCCTGATTACAGAAAAGGAGGGTATAATCCCTAACAGAACTACCCCTG-----AGTGCTATGGGACGATAG---AAGGGGGCGCCAGGCT-TAGCCTGTGGGTGTGAGGAGGTTTGCTCAGGACTTGGCCAACATCTTCTTAAAGTAAGTCTTGGAAGACAGATGGCAAAGA------------ATCGGATGGACAAGATGTATGCATTGTGGAGCAGGATGGTGGAGGGA--CTTCCCAGGCACAGGGAGTAGCATTGCAGAGGGGCAAAGATAGCACAGAGCTAATCATCTTCAGGG--------------CATAGAAACAGCTGGAAATGCGACCAGAGGCAGATCAAGATCAGACATGAAAGTGCTTTAGGAAACAGCCAGGTT a score=3724 s mm7.chr15_random 361184 274 + 7075849 gaaccTACATCCTAAGATACTCTTGAGAACTGCAGTTGCTCATGACAGTAGACAGGGGATACCAAAGATGTTGAAAGTG-GCAGCCATGGTAGGTGATAG-AAAAGGAAATTTACCATAGACACAGCAAAGGCAGTACCAAAATCTCAGGTGAATCTAAGAGTTTCCCTGTGAGGCCTTTGTCTCTGTTGATATTGTAGGAATAAGGAGAGCAGGGGGTTCA------TGACTCCTGTAGGAAGAAATGGAAAAGAG--TTTGTGGTACCCATAAAA--------CCAGAAG s bosTau2.scaffold1164 252109 274 + 275359 GAATTTAGAATTTAAGATTCTTTTGAGA----------CACATGACTGCAAACACA------CACAAATGCTGCATGTTTGTGGTCACTGTTGTGGACAGCAAAAGGGAGCTTGCCAGAGACCCAGAGAAGGTGGTGCTGAAAGCTCAGGTGGAATTGGAGACCAGGACAGGTGACCGT--TCCCAGTCTTAATCGTAGAAGTCGGGATGGGCAGGTGTTTACTAAGGTGAGGCCTTGGAGGATCAGTGGAAGATAATTTTTGTGGTTCCTGGAAAGAGAATGATCCAGAAG a score=7605 s mm7.chr15_random 362310 441 + 7075849 CTTTGCCTGGACTATTCCTATCCTGAAGCCAGTTTTCACATTAGCCTGCCAGATCCTTGTCATTACAGCACAGC----AGATTGTCTGCACTGGTCTTGGAGTTGGCTCAGTGATTAGCTCTTCCATTCCTTTTGACTCCCAAATCTCCTCCATTTG--TGTCCTCTGTGATTTTCCTGACTATGTGTGACCACCTGCAGACTCTTCTT---GTAGATTCAAGAAGCTTCTAGTGAGCAGTGTGTGGTTTTCCT-------------------------CTCTCC-AAAAGGCT--------------TCAGACCT----GCAGCACATGGAAGGAAGGCTATTGCACTACCG--------GAGTCTCTGTAAACAGCTG--CAGGCAGCTCTACCCCCAAAACAGATAGTCTGTGCAGATGTTTTTATGGGAGGAAGAC-CGAGTTTGTTCTCTGTGCTGTTCTAAGCCTCTCACCACTGTGCAAGGGCCTTTCTTTTTCTTTT s bosTau2.scaffold1164 253094 496 + 275359 CTTTCCCTAGACAATTCCTATTGCATTGGCTACTTTAACACTAACTTGCTGAATTCTTTGTACAGTAAGATAGTCGTTAGATTCTGGGTGTTTTGTTTACTTTTGCCTTGGCGAAT-GCTCTTCTGTTCCCTCTAGCCTAAAGATCCCCTGTTTTCTCTTGGCCTCCCTGCTTTTCGTGTCTAGATATGACCACCCCGAGTCTCTTCTTCCTGTCCGTGGACGAACTTACTAGCCAGGAGCGTTTGTTCCTCCTTCCCCTGGAGATGCATTTGCCGCCTCTCTCCTAACAGGCTGCCAGCTTAAAAACTCAGTCCTTAAAACAACACGAACTAGCAA--CTGCTGAAGCGCCGCCTCTTCTGAGCCCCCTTAAACAGCTGTGCACGCGGCTTGACCC--AGAACAGATAACACACACAGATGTGTTTATGGGAAGGAGGCACGAACACTCTCAGGGTGTTGTTTTCGGCTTCTCACCAC--TGCAGGGA--TTTCTTCTCTTTTT a score=5108 s mm7.chr15_random 367809 708 + 7075849 GAAAGCTGTGGGCACAATCTCCCAAGGGGTGAGTGAACCTACACGATTCCCTGAACAGGACCTTAGCATGACTGTGCTACTCTCTGTTTAGTGCTATATTTAAAAATATTGCACCA--TCTTGTGGAAGAACTGAGGGTTTTTTTTAAGGTGCTAGGAGTAgatccagcaaacc-cctgtgtgta-atgtatccaaaggacttgacagcggag----------------ataattgcacacctatgttccaagcagcctatttccacagaagccaacacccacgggcagtctgtgttcatccct-ggattatgggtggg-aattaatgtgt---------------ttaaatactatacagccttgaaaaggatgag---ctgatacatagcctaatagagac--------------ttactctaagt-aaacgggcaattcctaaatg---atacatgctgattccac--acgtgaggtttccagag--------------gaaaatcagaggaaagg--tagttgccagggt-tgagaggagagga-----aagtaggtgttgtggtggagtttacagagt----ttcaagttttgtgagatgaaatggttatacagatcggctCCCAGGTAGTAACATTGGCTCTCAGGCTTAGTATTGAGCACTAAGTT--AAAATGGTCCAAAGAGGAAGTC------AGCGCTTTCC----------------------------TGTACTACAAT----------TAACAATGTGTGTATCAGTA------------------------TTCTGGGACTACTGGCCCTC------ACTGCTGGTCTCCC----TGTGACTTAACCATCATCACTTCC s bosTau2.scaffold1164 258512 829 + 275359 GGAAGGAGTGAGTGAGATCGCCTG-TGAGTGAATGAAGCCACCTGATAGACTGCCCAGGACC--AGC----CTTTGTTACCCATGGCTTCATTGCTTATGCAGAAATATTGTACCACATTTTACAGGAGAACCGTGA-------------TCCtaggactagactcagcagtccacttgtgggcctgtatacccgaaattattgaaagcagggtcacaaagagatacttacatttatatacctacattc---gtagcatattcttacagcaaccaaaat--------aatacaagttcatccttcagcagatgaatggataagcaaaatgtcatcaatccagacagtggaatatcattcagctttaaaaggaagaaaactctgacgcacgctacaacacggatgaactttgaggacattacactaaatgaaataagccagtcacaagaacaaatacgttatgatgccacttacatgaggtatctagagtggccggattcgtggaaacagagagtagaggagtggttgccagggtctgggaggaagggagcaataaagagttgtt-tagtggg---tatagagtagagtttgagttttgcaagatagataagttcaggagattggttatacagcagt----ttgaatat---acttactactaaactatacacttgacattggttaaggtgggaaattttatgtatagcttaccacaatATATATACTtataccataatatatataccacaatatatataGCTTAACAATATATATACTTGTAATCAACAAAAAGAGGAAAAAGAGATCCTGAGACT---GGCCCTCCGCGTTGCCGATAGTCCTCTGCTTTATGATTTTGTCGTCATGGGGTCT a score=12398 s mm7.chr15_random 368784 1022 + 7075849 cagctCTGAAGAAACTGTAATGACGTCTTTGGAAAGAATGTGGCTTGTGCATTATAAGGGGAAAAATAAGTGGT--ACTGTCTACATTGT-TATGTTTCTTATTTTTAATTTTTGAATGAGTAAAC-ATTTGTACGTTTTTAGGAATAAACTTTGAGAACATGAGCAAATAGCTCAAatatatacatatacatatattatatcataatattatatatatacatatatatatacacgcatacatacatacatacatacatCATTTTTACTAATCATTTTCATTTTAAAACTGCCACTTCTGAGACTTGTCGGATGGTCTAT--GTTGGCTATTTCAGTATCATTGGAAAACTAGCCTGT--GCCTCTGTAGATGGAAAGTAGGACCCTATCATAAACCTTTTAACCATTATAA--GCCTCGGGGTCATTTTTAGTTTGCTTAATTTTTATTTAAATCAGTAAGCAGATTCAAGTGCTAGAGCCCCTGAAAACAAC--------ATTAGCAAGTCTTGGAGATTCCTGG----------GATGTCTGGAGTCTCT--GAGGGAGCAGTAGAGGGCTGACTTCCCT-TGAAGCCACTGTCACCCAGAGCCAGCCTCTCTCTGCCCTAGAATCCTGTGACAATGTGCTTCT-TGTCACATGGCTTAGGCAGAGAGAGTTGGTCCCCCCACGTGACAGCTCAGCA------------------CAGGCTGTTTGTATCAAAACTATGCTTGATGGGTTTTAGTGGAATCATCTGAAGGTGTGTTTACCTTGAAGGGTCAAGTTGGGAGTACCCCAGGGTTCATGGATCTCTGGTCTCATTGCACTGCCACAGTCGAGCTACTGCGGGGTATTTGGGACTTGTATAGGACAGAATAATTTATATTAAAATCTTAAGCTG----TTTGACGGTATGGTCTATAACACTGTAATGTGAGAT--AAAGGATGA-----------AGATAACCCTTTGAATTCTTTTTTTTTTTAAACACTTCTTGTAACTGAAGCAGA----------------TTCTTGAATGATACTGGAGTTTGTTCATTATTACTGTTCTGTGGAGTTGGGCTCCAAATT s bosTau2.scaffold1164 259676 977 + 275359 CACCTCTGTTAAAACGTGGATAACAAATTTGAAAAGACTGGGGTTT-------AGAATAGGAGAAAAAAGTAATTAACTTTGTACAAGCTGTATATGTCTTA-----ACTGTTTAAATCAATGAACTACTGACGTATTTTTGTTGCTGAAACCCGAGGGTGTGAATACATTGCTTAGGTTTA--------------------------AGTAGATCTATCCAAAAGTCCAGA-----------------------------------------ATTGTCTATTGAGAGCTGTCATTTCTGTGATTTACTTTATGGTATGTAAGTTGGTGTTTTAAGTGTCTTTTGAAA-CTACTTTTTTCACCGCTG-----GGAAAAAAAGACCCAATGATAAAACTTTTTCCCATTAAAAAAGCTTGAGGTAGATTTTCAGTTTGCTTGTTTTC------AAGAAATAAGAGAATTAGAGCTCTAGAACGCCTAAGAGAAACTAATGGTTGTTACAAGGCTTTGAAGACTTCTGGTGTTCAGACTGAAGTCCGGAGTCTTTTTAAGGGAGTTGCCAAGGACGAAACCCCATCTGAAGTCTCTAGGAGCCAGA-----CTTCATTCCAGGATGGTGTCCTGTTGAAACAGGCGCCCACGTCACATGTTTCAGAAAGACAGAATGGGGGCCCCCA-GTGACTGTTTATCGTCAGTGGGACTAGACATTCAAACCTTTTATGCCAGAACTGGGCACTGTAACATTAAAAGGC----TTTAAACCTGTGTTTAACTTAA---------TTGGCAGTATCCG----------------TAGTCTCATTGCATTGCATCACTGGGATTACTGTGAAATATTTGAGTCTTGTATAAGACAGATTAATTTAGATTAAAATCTTGAGGAGCTAATTTAAAAGTATGTCTCACGATACTATAAATTGAGATGGAACAGATAATAAGCCTAAGTAGAGAGTCCTTTCAGAT-GTCTTTGATCAAAGCACTTGCGAT-GCTGAAGGAAAGGTGTTTTTTTTCCTTTCTTTGTTTAGTGTTACAGTTCATTCATTCATATAATTCTCAGAAATTGGGACCAGAGTT a score=4236 s mm7.chr15_random 370787 129 + 7075849 CTTTAAACAAAGATTTTGGCACCTCTACTCC------AAGTGCCAAAATGACATCAAAGAAAACTAAGTAATA-TATTTATGACATTCCTCAGGAGAGAAGACTACATAGCCACTAAAAATTCCATTGTATGAAAG s bosTau2.scaffold1164 261014 125 + 275359 CTTTAAATAGAG-----GAGACCTACACTCTTAGAATAAGTAGCAAAATAACACAACCTAAAACCAAATAATAGTGATTATGGCAT------AGAAGGAAAACTATGCAGCCACTAAAAATCATATTGTATAAAAG a score=17765 s mm7.chr15_random 371486 761 + 7075849 TATAGGTTCACGTGGGCTTTATTAATTAATAAGTTAGTCCAAGTTTTTA-GCTTTTATACTGCGAATTGTCTCCTTACC---TTTGAACAGTTCAGCGTGAACCAAGCAGATTTCTCTCCCTGTGCTTCTTTAAGAGAATGATGCTTAGTGGACAGGAAGTTAGC-ATGATGCGCCAGCATGACATTACTTGAAGTTAGTCATGCTTTTTAAAAATCTAGTGCTTACAAGCTGTGTGCATGTGTTCCCAATAAAAATGAATTTGCCTCCACAGAAGACAACTCGGTTTGGTACCCTGTGCTTTGCTTTTGCACAGTTGTTGACTGAT-------------------ATTAGTCCCCAAGTATTGCAAGGCCACCCCTCACCAGAGCAG---GACCAACATACATTTGGAAGCTTAGGAGGTAGCTCCTGCCAGCTCAGAATGCCAA-TTAGGAGCCTC------AGAACTCATGTCCACACTCCCGTATCATTGCCTGGCCCCTCTTTGCACCTGTGGACACTGACCTTACAGTGTTGGCTGCCTGCGTGTTCCTTTAGTTGTTTGTGAATCTGGCTCTCCCAGGAAACAGGAGGCAAACAGCCATCCCCTCTCCCCCTTAATAATTCCCATCTGCTAAATGCTTCCTGTGTGCCTGAAACTCTCCTTAAATGTTGCATTATGTTGGTTGATTTGAACCTCTTATTAGGAAAAGTAAATGCTGTTTTCTCCATGTGACAGGTGGAAGAGCGAAGGATTTGATTTTCA---------GAAGACAGAATTCTAACCTCTAGAAAAT s bosTau2.scaffold1164 262652 742 + 275359 TATAAATTTAGATGGGCCTTGTTAGT-AATTACTTGGTTCAGATTTTTACGTATTTATTCTACTCATTGGCTGCTTACACTGTTTGAACACTGAAACATGAATCAAGCACATTTAT-TCTTGGTACTGTTTGAAAGGGTTGGTGCTTAGTGTATAAGAAGCTAAAGATGGCAAGCCAGGATGGCATTACTTTAGTTTAGTCATGCTGTTT-AAAATCCACTGCTTGCAAGTCGTGTGCATGTGTTTCCAATAACGACTTGTGTG---CCACAGAAGATTGCTTTCATTAACATTTTGTGCTTCACTTTCACACTCTCGTTTATTCGTTGCAAGTTGCTTTACCCTCAGTGGTTCTTAAGTCCTGGACCACTGTCCCTCAGCAGTGCGGTCTGATCTTTTCGTCTTTGGAAACTTAGAAGGTGACCCCGGCCAGTTCATCAGGCCCGTTTAGGTGGCTCTCAGAAAGAATTCCAGTTCA----CCTGTGTCAT-------CCCCACTTGGTGCTT-TGTCCGCTGGCCTTGTGACAGTGGCCACGT-----TTCCTCTGGTCATTTCTGACTCGGTCTCCCCTAGGAAACGAGA---------------CACTTCACCGATGATCATT-------------TGTTTCCTGCAAACTACACAACCTcttcaca---tgcattacttcg-----tttaaatctcgtattatgaaaagtaagccccattttctcctttttataggtggaa-aactcaggctTTGGTTTAGAATAAGCCAGGAAGGTAGAACTCC--CCTGAAGAAAAT a score=21123 s mm7.chr15_random 377863 492 + 7075849 TGTTTGTTG-TTTCCTACAGGATATGATGTTTCAGCTTCTCCAAGGTCTGAACTTTTTTCATTCTCACAGAGTAGTGCCTTGCGATCTGAAACCGCAGAACATTCTGGTAACCAGCAGTGGACAGATAAAGCTTGC----------------CACATCTATAGTTTTCAGATGGCCCTTACCTCGGTGGTAAGTGAT--ATCATTGTCCTGGCATTAAATGTAGTTTTCCTGTTTTAATTGACAAACTGCCCCC--TTCGTGATCCTCCTGCTGTTTCTGCTCACACTTAGTCTGTGAATGGAATGTCTGTGTGCTTTTTTCACTAGCTTTGGC------TAAGAGGAAAGTAAGGGCCTTGCTTACTATGACCTCAGATGCATCT-GACTGGGTTTGTTATGGATGGGAACCAATCACAGAAATAGCCTGTTGGCACCTTAGCCACTAGGGAGGAGTCAGTTAGACATTTCTAAATGA--------------GTTTTGCTATAACCTGGGTTTTTA-AGTTGCATACATAATGT s bosTau2.scaffold1164 264716 519 + 275359 TGTTTCTTGGTTTTATTTAGGATATGATGTTTCAGCTTCTCCGAGGCCTGGACTTTCTTCATTCTCACCGAGTGGTGCATCGTGATCTAAAACCACAGAACATTCTGGTGACCAGCAGTGGACAAATAAAGCTGGCTGACTTCGGCCTTGCTCGCATCTACAGTTTTCAGATGGCTCTTACCTCAGTGGTGAGTGAGAAAGCACTGTTCTTTCCTTCAACTTCATTTTCCTCTTTGGAATGACAGACTGCCCCCATTCCAGGCCCCTAATGTTATTACTGCCCGTGGTCAGTTTGTGGACAGAATGTCTTTGCACTTTTTATA-------TGGCGGGCTGTAGGAAGAGAGT----GTTCTGCTTACC---ACTGCAGACACATCCGGGCTGGGCTTGTTGTGGAC-AGAACCCATTGCAGAAATAGACCGTT-GCTTCTTAGCCACTAGAAAGGAATCAGTTACAAGTTTCCCAATGGTTTTGCCATATGGCTTTTTGCCATAACCACTGTTTTCAGAGCTGCATATGTCGTGT a score=3789 s mm7.chr15_random 378826 286 + 7075849 TTCAGCCTCAAAGAGGCTCTGAAACCAGA----CACTGGCCTG-----GATGGGGGTCCCTTGTTGGGAAATGTGAGGTGGTACTGTTGGCCATTGTAGTGAGGGAATGAGATGGCTGCTTCCATTCTTGGCACATGTGCTGCAAGAAGGCTGACATTCTACACAGAAAAACTACAAAACCTGCTTCCCCAGGGTCCTGCAGTGTT--GGCCTGGAAGGTGAAGTCCAGGAGAAGAGTC-----------------ACTTGG-TCAGGAAAAACGTTCAACTTACAAAACTTACTTGTGCCTCTTCCTCTTTCCC s bosTau2.scaffold1164 266322 281 + 275359 TTTAGCCTCAAAGTGTTTCTCAGTCAAGGGTGGCGCTGGAGGGAGGGGGGAGGGGAAACGTGGTTGAGAAATGTATGACAGCATCTTTGGTCATCATAACTTGGGGGGTGGA-----------------GGCA-----GCTGCAAGGTAGCTAATATTCTGCTTAACAAAG-------AATTGCCTCCACAAATTCCAGTAATGCCCCAGCTGAGAAGTAGACATTCAGGAGGGGAGTTGGAAATTCTCGGAGAGAACTTGCCTTATAAAAAACACTCAATTTGCAAAA-----GTATTCTGCTTCCTCATCCCC a score=31564 s mm7.chr15_random 379206 1147 + 7075849 GCTCTTGAAAGATAAA---TCTTACTTT------GTTCAGTATTTGTCAGTGCCTCAGAGAAGACACAGCCCAAGTGGATATTTAAAGAACAGGCCTCAGCTTCAGGTGGAGTGAGGCAAGCCCTCAGACTTTTACATAACTACACCAGAAAGGGCTTGAGTCTGTGTGCTTCCCCAATGAGAAGGATGAGGTAGGCTTTGTGCTTCCCTAGGAAGTAACTGTGCCTGTTTTGGGCAAGGGGGTCCTGGGAAGAAGCTTGAATAGGCTTTGTGATCATCTGGGAGCAGATGA----AGAAACTAATCCCT--GGGCATATTAATTGGGGGGGGGGGGAGA-GTA--TGAGTCATCTTCAT------CCCCCTAAGTTGAACAC-AATAACTATAAATAAAAACGGAAAACCCAGTTGAGTTTTGTTTAATTTTTTTC-------CTTGTTAAATTTAGAG---GATAACCCAGCTTGTGAGTTACATCAGTTGACACCCCATTCTTGCTGAAAGTTGGCATGTATAAGCAGGAAAACACAAACTAATGATTTCATATCCCAAGAAAAGGACAAGGGCAAACATATATCTATTACTAGATATATTGATGTCTAGTTTGCATTGTCTATTTTGTATTTACTATAGTGACATAA-----------------------TAAAAGGGA-------------------------------AAGACTTAATTCCAAAGAAAGATGTTTGGAATTTAATGGTAACATTAAGAGGCATGTTTTCTTTAGGGTACTGCATTTTAAACACTCCCCACTGTTACTATATTTTCCTGCTTACAGGAAAAAAAAATCCACCTGATAAAATAATGCTTTGATTTTTACATATATG----CA-TAAAAACAGAATCGCTGTCTTTCAGACTGAACTGATAAATTA----------------CTTTTAGTATTCTTTT-----------------AATAGGCTGCACTCCGCTACCTAGAAATACCCATTTTACACTAGGTTATGTCACACAAGGAAATGGAAAGCCACGTAATTTGCAGACTGGCAAGAGATTTGCAAGTTAACTGACCTGAGACCACCATCTTAACTGCTGTGAAAAGCAT--GTATATTGCTCAT-TGCCAAGGCTTGATCTATAGAGTCTTTCCTGAGACCCCCTTTAGAAACTGACTGTACTTTCCT-TGGCGTTA---------------------------------TTTTCTATCTTGTTGGTAGTTATTTGGGGCTTTTATTTATAGAGCAGTGGTGAGTCATTTGAAG s bosTau2.scaffold1164 266717 1274 + 275359 ACTGTTGAGAGAGAAGCATTCTTGTTTCCTGTTGGCCCAACACACACTGTCACTTTTGAGAAGAGTGGGCACAAAATGGTGTTTAAAGGACACATCTCCGATTTGGGTGGTGTCAAGGGAGCCCTTGTATGCTTATATAATCACACCACAAAGGGCT-GAGTCTGTGTGTTTGCCCAGTGGGAAGGGTGAGGT-GGCTCCG-GCTTCCCTAGGAAGTAGTTTTGTATGTT----GTTTCGGGGCCCTGGGGAGAAGCTTGAATAGGCTTTGCGATC-----TGGACAGATGATAGAAGGAACTGGTCTCCTAGGGTAGATTAATTGAAGGAAGGATGAGCCATAACTGAGCCACTTTATTTTAATCCCCCCTCAACGGGGCACTGAAAACCGTAAATAAAAACAGGAAACCCAGTTGGGTTTGTTTTGATTTTTTTTTTTTCTTCTTCTTAAATTTGAGGAATGATAGCCCAGCTTGTGCGTAACACCAATTAACATTCCATTCTCCCTGAAAGTTGATATGTTCAGACAGGAAAATGGAGACAAATGATTTCGTAC----AGAAAAGGGGAAAGGCAGTCATA-----AATACCTGATTTTTCAGTATCTAGCTTGTACTGTATACTCTATACTTCTTAT-GTGACATAAAATAATTCTTATGTGACATGAACTAAAAAGGATTAGCAATCAGAAAAGACACTGGAACAAATTGAGATTTTACTTGAAACAGTAGTAGCTGAAATTTAATGTTAAGAATAAAGAGTATGATTCCTGTAGAATGCTGCA-TTAAATTTTTTCCCACTGTT-CGATATTTTTCTTTTTAAGGG-----AAAATCCATTT-CTGTAGTGATACATTGGTTTGCATACACATGGTGACACTAGACTTGGAATTGTT-TTTTTCAGAATGAACTGATATTTTGGGGTTTTTTTGTTTGTTTGTTTGTGTTTTTTTTGCATTTCTCAAAGAGAAAAAGACTACATTCCACTTCCTGGAAATACGCATATTTTAGTGGGTTATGTCATAC-AGGAACTGGGAATCAACTTGATTTGTGGAATGTTAAAGAAATTTCAAGTTAACTGATTGGAAACTGACATTTT-ACAACCATGAGAAACACTAATACACTACTTCTGTTCCAAAGCCGGACTCAGATTTCCCCTTTTGGTACCCCC-GCAGCAATTAATCCCACCTTCCTCCCGCATTATTTCCAGAGAAACATTAATGCCTTTCGTAAGACTTTTCTGTCTTGTTTGTAATTATTTAGGGATTTTGTTTATCAAGC---TGTAAGTTCCTTAAAG a score=43295 s mm7.chr15_random 389636 1518 + 7075849 TGTTGTTAGCACTTGGTAAACAGTGAAGAAACTCTTCAATTTCAGACAACAGCTTTTATATGCTTAGGGGAGGAAAGGAGATAA--GAGTTCTGGCTttcagtcaacaattcccagtcacctcctctgtgctgggctctgtccac-caccttagaggagatgctgaactcaagtggacagggtgtctgccctca--gagcttacaAGCAGAATTGGGAAGTAGATCTGAGCACAACAGTCTCGGGAAGCAATGTGCCTTTAGAAACAGAGCAAAATACAATCGAGGAAGAATTTCCCGTTATGTGGA--GTCACATGACCCATGGATCTACTGGGGCTGGAGCTAGAGAAGCCCACACTGGTCACCTGTGCCAGGATGTGGGATGTCTGCAAAGGTCACAGCATTGTCCTTCCAGAACCTGTCTGCATTCAGCTCCACTGGATGTGTGTGCATCAAGCCATCTGCACTTGTTTTCTGTGTGTGTGCCTGGAATGAAGTCCTTGCATGACACCCAGTTGGCACGCTCAAGT-GACAAAGTGAAGTAGGACCAGAAGTT-GAAAACAATGTCATCTTTTACATGAGAAAATAAATTCTTTATGTTTGTTTTCCTCTCTGTGCATGTTGTATTTACTATGGAGACCTGGCAGGGATTGAGCCTCAGCCCGGCAGCTGAGCAGTTCCCACAGAAGCCTACGGAGGCTGCCAGTGCATACTGAATGAATCAAATCCA--GCATTATCTGAGTATCATGGAAAAAACCCAAAGTCCTGTTGCCTCAGCACCTCTGCAAAAGTTCAGAACACACCTCTGAAGCAGGAAAGGCTCCTGGAACGCCCTCCGGTCTCAACATC---TCGCCGTGACACAAACAGGACTATTTTGTTAATATTCGAAGTTGC-AGTACATATTTCATAGCTAACAATGGGGTGTTTGTGTGGGTTTCGTTTTCACTTTGACCTGTGAGGGAAGTGGAGTACAATGGGAGCAGTGC---AGAGCTGGGAAGAGAACACG-TTTTCTTTAGGATTCCCAAGGCTGCGTACGTGGAAAATGCCAGGGCCAAAACAAACACAAGGCCTTGTCCAGATCCCTCTGTTGCTCATTCTCAGTGGTAATAAAACATGGTT-GAGTCGCTGTCTGATAGGCTGACTCTGCTCAC--AGTCACAGCGGCCACCAATGGCCACTGTATGAGTTTCTCCCATGTACAAAAGAGAATGAGTTCTGCACTGTTCAGAAAAACGCTGTAG-GCGGCTGTGCCTG---------TTACACCAGCCCTGCTGCCGAGGTGGATC-CATGACTG-TCTCCTTGTCCATAGAAGATAGGTGTTCATTTGCCCACCTAAGGCCAGATCCTTCATGAGTGGTGACTGTTATGAATTAGTTC-AGACAAAAATAGGTGAGCTGTGAAGCTTCTGCCTGGGGAATATTTTACTCACGGGGAAGGATTGGCTTCCTCTCAAGTCCTCTGTACA--AGTTTGGCCAGCATACCCCATCTAGGGATGGTGTGCATAGAGACTGCTTGTCTCCTGGCTTTTTA s bosTau2.scaffold1164 271857 1433 + 275359 TGTGGGTAGCGCTTAGTAAACACGAAAGAAACCTTGTGGATTCAGAAAGT--CTTTGATAACCCGAGGGTAGAAA----GTTAATGGAGTTGTGAcattcagtcagcagatcctgatcgctttccacgtgccaagcactgtcggtgaatccgagggaccgtggggagcagaagtggacgaggtct-tgctctcatggagct------caaaatggggaggcagatctTAATCAGTTAGTCATGCCAAGAAGTGTAGAGTTAGAAACAGAGAAAAGTGCAA-CAAGGGAGAA---------GGGCAGAATGCTGCAAAGCCCTTGGGTC----------------AGGGAAGCCCTCCCCGCTCACGCCCTCCAGGATGGGAGATG-CTGAGAGGCCGCCAGCATCCTCC-------------CTGGGTGCAGGCCCCATGGAGGTGCCCG--TCCTGCACTCTGTGCTCATTTTGTCCGTTTCTGTTTGGGATAG----CTCACTCGACA----GCTGGCACCACGAAGCCGGCAAAGGGAAGCCAGACCCAAGATCAGAGAACAATGTCATCTTTTACAGGAGAAAATAAATTGTTTATGCTTGTTT-CCTCTCCGTGCGTGTTGTATTTACTATGGAGACCTGGCAGGGTCTGTGCCTCC-TCGGGCAGCCGAGTTGCTCCCACAGAAGCCTGCAAAGCCTGCCAGTGCATACTGAGTAAATCAGGGCAAAGGCGTGAACCGAGTATAATGGAAAAAACCCAAAG-CCTGTCGCCAGGGCACCTCGGCGAAAGGGCAGGACGCACCTC--------GCCAGGCTCCCGTGGCTCCCGCCCCGTTCGACCTCCGCTCGCCGAGAGACAGCCAGGTCTGTTGTG--AACGCCTCCAGTCGCCAGTGCGTGTTTCCCAGCTCACAATGGAGCGCTTGTGCCGCCTTCGTTTTCACTTTCACCAGCGAGGGAAGCGGAGCACAATGGG-GCAGTACCCACGGCTTGGGAACAGGACACGTTTTTCCTTAGGGTTCCCAGGGCTGGGGACGTGGAAAAGGCCAGAGCCAAGACAAACACGCGAAGCCAGCCAGAT-CCTCCGTTACGCTTTCTCAGTGGCAATCAAACACATTTCCAGTTACCATCTGATGGGTAGTCTCTGCCTGTGGGGTAAAGGCAGATGCTGTTGACCACGG--TGAGCACCTTCCCTG-AAGAAAGAGCCTGTATTCCTCACCGTACAGGATGCCGCCGTGGCGTGCCTGTGGGTGCCTATCGCATCGCACCGACTCTTCTTGCTCAGTCCATCAAATGACTGCTTTCCTTGTTTGTAAAAGATAGACGTTCATTTGATTG--------CAGCTCCTTCGTAAGCGATCACTGCTGAAAATTAGTTCTGGACAAAAACAGTTTAACTGTAATGCTACTGCCTGGAAGCTGTTTTGCT----------------------------TCCTCCATACATCTGTTCGGCC-----CCCTCATCAAGGTATGATATAGACAGGGTCTGCTTGTCACCTGGTTATCTA a score=11907 s mm7.chr15_random 391187 521 + 7075849 AGATCTCAGAAGCCTGAGATCAGACTCAAATGTAAAGATAGCAC---GTGTGAAGGTTGTGGAGACCAGGTGCTTTAGTGAGGCCTTGCAAGCC-ATGGTTCCCCGGGACTCCAGAAGATGACAGAATATCCCTGTCTCTTACTTTTAGCATTCCTAAGGGAATA--CATTTCAGTGCCATGTTAGGCACTGAGCAATCCGAAACTTTATGTCATAGGGCAACTTCCTCTTCGAAAGCTTGCCTCACCGGAAGGTGTTGTTTCCATACTCTGACTGTGAGGCATGGTCCTTAGAATATAATGTAAAACAATGTTTCTGTAACTAGGATTTTTGTGCCCTCTTTAATTCTTCCACTATATGAACTTCTTG---CTTGCAGCTGTCAC----AACGACTGTGTGAGGCAGGGGGAGGTAGCCGTACCTTCATTTTGTCTGCACTTTAGTAATCTCATAGTA--------TAAGTCAAGATATGTTAATGAAGTTTTGTAGCATTTGGCTTAACTGTTCTGAGTCATTCAGTTCACGTTTTACAC s bosTau2.scaffold1164 273564 493 + 275359 AAATCTCAGAAGCTCGAGGCCAGGTTTGAGTGTAAAGACCAACCATTGTTCTAACGTTTTGGAGTCCAAGTGCTTTAGAGAGGTTTTGCAAACAGAGGGTTTCTTAGGGATCCAGAAGCTGGAAACATTTCGTTGCCTCTTCCATTTAATATTCGTATGGGAATGATTATCCCATCGCC-------------------CCTAAATTC----CCTTAACACAACTGTCCTGTCA------TGTCCCTTCAG-------------------CAGAGTATGAGACGCGGTCCTTAGAATTGAGTAGAAAACAATGTCTCTATAACTTGGATTTTCACATCCTCTCTAATTCTTAGGATATGT-CACTTCTGGTGTTTTGCAGATACCGCTGCTTGCTCCCTTGTAAGGCGGGGAAAGATAGGAATATCTTCAGTTTGCTTGGGCTTGGCTCGTCTCCTAGTACAAGTTCCTGAGTTGAGAAGTGTCACTGAAATTCTGTTACGTTGAACACTGCCGTTTTTATTCACTCGCCTGCGGTGTTGCAC a score=28362 s mm7.chr15_random 392351 1118 + 7075849 ATCTCTACAGGTCTCACCAAAAATCAAGGCCCATTTTCTAAATGATGATGCTATGATACTGGGTTT-----CCAGCTAAACTCTGACCCAACCACTATTTTCTCAAGTTCATTTCTCAATGATGTCC--TTGGCTGACTCCAC----CCTCTTAAAAC--CCAGGTTTTAGCTCTCCTTTCTTTAGGGTTTAACATGGTGGGTGAGTGGTACTGTAGCTGTGCCTGGTGTCTGCCAAGGTGCTGATGGTTTT-AAATCTCACGTAACTATGAAGGTTAGTTAGACTTGACAGTTGGCTGGGACGGACTAGCCTGCCTTCTCATCTTGGGAAAAT--------GAAAGAAGGGGAAAGTGTAGGTGAATTTACTTTAGTACTGCTCATGTGTTTATTCTAAAGGCTTGGCAGAGTCTAAAAATGGGG-CTGTAAATTTAACAGCTCAACCATAAAAAAATCCCAAAACAAGGAAT-AAGGAGCTCTACGGTTTCTAGGTTTGGATAGCAGCATAAAATTCCAGATTTATCTTCTGTCGTTTGATTTTTTTTT-----------TCATTTTTAAAAC-TTCTTGTTTTTCTTTTTTTCCCCCACCTCTGTTTTGATTACTTGCATCATAAAGGTTACCCATGCTCTACAGTGTGAGGCCGTGTCTAAGGTTACCGTGCTCTGCAGTGTGAGGCTGTGTCTAAGGTTACCCATGTTTTGCAGTGTGAGGATGTGTTTAAGGTTACCTGTGCTCTGCAGGGTAAGGCCGTGTCTAAGGTTACTGTGCTCTGCAGTGTGAGGACGAGTCTAAGGTTACCTGTGCTCTGCAGTGTGAGGCCCTGTCTGTCTTTATCAAGTACTTGGTGGATATACTTGAGTTGGTCCAACTCATGGTGCCATTAAATACTGTCTATACCTTGTG-AAGGGTGGGTGGTTTCAGGGAGGTAGGGACTGCACATGGGTATCTGTTCTTGTGGGAAAACATGCTTCAGTGGCTTACTGGCACTGGGTCTGGAATGTGGCATTTAAAAGTACCTTTGTGCAGTAGGAAAGAATCCTGTCAAGAATAAACAGTCTGACCTTGTTAAATGGGCCAAAGTCTGTCTGTAATCTAGTTCCAGAAAACTAGCTTTTACTAGTTTAGAGAAAGCAGTTCAG s bosTau2.chr4 65170896 932 - 69556449 ATCTGTATAGCTGTCTCCAGAAGTTCAGCTCAGACTTGTGTGCGGTCGCTCTGTTATGCTGGATTTTCTTTCCTGTTGTATT--GACTTTATTGCTAATATTTCAAATGTGTTTATCACCGATGCTCGCTGGGCTG-CTGAACAGTGCCTCTTGCTGCTCCCACTTTCTGTTTTCCTTTTCTCTGCAGATTGGAGCACAAGGAGAGTGACGTTGTGAC---ACCCAACATC-ATAAGGACACTGGCGATTTTTAAGCCCCTCATAAATTTGAATGCTA---AAGCTT-ACAGTTGGCTGTGGAGGAATAGTCTACCGTCAGGTCTCAGGGAAACATCCAACAGAAAGGAGGGGAACGCGTAGGAGAATTTACTTTAGCACTGCTCATATATTTATTTTGAAGGCT-GGCAGAATCTAAAAGTGGGGGCCATAAATTTAGCCACTCAACCATAAAAAG--CCCAAAATAAGGGATTAAAAATTTCTCCTGCTTCTAGGTTTGGATACTA----AAGTTTCAAGATTTCTCTTCTGCTATATAACTTTTTTTTGTTTGTTTGTTTAATTTCTAACCCATCCTTCCCTTTCTTCTTT---CCCATTTTTATTTTGATGAATTCCTCTTTAAAGGTCAGC------------------------------------------------------------------------ATGCTTCTAGATGTGGGGACGTGTTT--------------------------------------------------------------------TCTGAGA--------------------GAGGC-----------------------TGGTAGAT------------------TCCTCGGTGACGCTGACGCCTCCCTGCACCTTATGTAACGCAGGGTGATTTCAGTGAGGTGTGGACCGCACATGG-TATCTGTTCTTGTGGGAAAATATGCTTCAGTGGTTTACTGGCACTGGTCTTGGAATGTGGCATTTAAAAGTACCTTTTTACAGTGGGAAAGAATTCTGTCAAGAATAAACAGTCTGACCTTGTTAAATGGGCCAAAGTCGGTCTGTAACCTAGTTCCAAAAAACTAGCTTTTACTAGTTTAGAAAAAGCAGATGAG a score=4285 s mm7.chr15_random 395272 173 + 7075849 ATGATATACATACAGGCCACTTGTTTGCTCCTTTAGCAT----TTCTTACTTACCTTTTTGTATTAGACTTAGCCATTTTTCCACACCTGGAATCCAGTCTATGTGCTCTTTGTCTTACCTTCACTGTGCAAATGTTTGTAATGCTGC----TACCTAGTTTCTCGGGATGAGCATTTGAA s bosTau2.chr4 65180673 175 - 69556449 ATAGTATCCATACAAGTTAATTTTTT------TTGGCGGGGGGCGGTCATTTAATTATGTCCATTCATCTTACACAGTTTTCCATATCTAACATATAGCTTGTTTATTCTTTTTCTTACCttcactgtgtgaatatacatagtagttcattttacccagtctcctaagatggacctttgga a score=5543 s mm7.chr15_random 395626 373 + 7075849 CCTCCTCTCC-CTTAACCGAATGCCTGTGAGCTCTCTGCTTCATCTCTTCCAGGTATCTCTGTGCACCTCCTTTGT----------------GTCTGCCCACTCATAAAGCATCCAAAATGTTC-------------TGACGAAAGTCAGTCTGGTATCTATGGCCGTGGCTGTCAATTGTCTGCAGAGGCATCTGCATCTTCTGTCTTGCCCCAGGATCCCCTGTGAGCCTCCCTGAGCTTCAG-CCCTCATTCCCACTTACTCCCTCAGAGCTCTGCCAGTTGATGCTTG-GCATCAGAAGAATCACCTGCTCACTACCTCACCAGCTCACTGGGTGGCCACTC-TCAGTGGCTAATCCCCACG------------CGCTCTCCCTTCTTGGACACCGCCACTGGTGATCACCAAG s bosTau2.chr4 65181637 385 - 69556449 CCTCCACTCCTCTTATCAGAATACGATTGTGCTCTCTGCCGCCTCTTTCCTGAGTGTCTCTGGTGATCACCTTTGTTGACCCTTCCTGTTCCTCCTCCCCACTAAGAAAGCATCCTGAGTGTTCCCACCTCAGCTTTTCACAGATCTCACCCAGG--GCTACAGCCTTAACGCTCATGTCTGTGCAGAGGCAGCCCAGCCATCAGCTCTG--CCGGGGTCCCCT----------CTGTGCATCAGACCCTCAAGCCCGCTTTTCCCTTCATGTCTCCACCTGGTGTCCCGTGTACAACAGAAAAGCAACATG-------------------ACTGAACTGCCACTCGTGAGCGTCTCCTGTCCCCGGCAGTTCTGCTTCATCTTCCTTTCTTTAATTTTATTACTTGTAATCACCAAG a score=5133 s mm7.chr15_random 395999 286 + 7075849 CCTGAGATGCTCAGA---TTTTTAAAGATATTGTTTGCATGAGCATATGTATAGTTACAGGTACAGAATAATAAATACAATGTTTCCTAATTAGTGAGCATTAATTTCTCAACAT-AGCAAAGAATTCTGGAGATAGGTAATTCTACAGCTGGTGTAACTGGGTCAGTGGTGACACCTTGGATATTTTAATCAAATACTGAAGAAAACAAAGCCTTCTTAATTGCTCAGTGTATTGATTATGTCttccctcatagcctcatgatggctgctgta-cttcagttatggcatc s bosTau2.chr4 65182257 279 - 69556449 ACTGAAATCCTTAGGGTTTTTTTCTGGAT-TCAGTTGTGTCAACGTGCATTTGATTACAGGTTCAGAATATGCAACCAGTTTTATCTTGAATAAT----AGTAGTTTTTAAATCTGACCCAAGAAGTCTGGAGATAAATAATTCTGCAGCTAGT-TAACT-GCTCGACCGTGTCATCTGGAGTCCTATAACC-AATGATTAGGAACAGAttccattctgctctcctcagtg----aaggatggtttcccttgtggtctcaaggtgactgttgcatcctcagacatcacacc a score=17405 s mm7.chr15_random 397871 413 + 7075849 AAGACTTAAATAACTGTTACTTCAATTTATTGGGCCTAAAGTA------ACATGATTATGTTGTGTTTAATTAGATACCTTGCTGTTTCTCTCTTTTTTTTTATCCCCATAATCCAGTTTTTGCTAAAGTTGACAAATTATATACCTCAAATGTGGTCATTATAGGACTAACCCCTAATGAGTG-AGTACAATATAAACAGCCACAAAA-GAGCACAATTTACTC--TTCAGGAGACAACAGGCTCCTTGAGGGAAGAGCTGGGACATCCCATGCTTTAGGCTCACCAAGTAGCAATTGGTAGTGAGGTTGTACTTTTCAGGTATTTAGAGCCGTCGTATAGGTAGCGTGTACTCACTATGGGCATGTTTATGTGGTCTTGGTTTACCACAGTCAGTGTT-TGTTGGTTCAGCTCATCCATTCA s bosTau2.chr4 65185589 421 - 69556449 AGGACTTAAGTGATACCTGCTTTAGCTTATTGGGCCTTAAAGACCCAGTACATAGTTATATTGTATCTAATTAGTCACCTGTCTTTCTGTTTCACCTTTTCCATTCCCATAATCCAGTTTTTGCTGAAGTTGGCAAATTACATACTTCACATGTGGTCATGATATGACTAAACCCTAATGAGGGTTATGTTATGTAAACAGCCACAAAATGCCCATAATTTACTCTTTTCATTAGACAACAAGCACCTTGAGGGGAAAAACCAGGCATCACACATATTATGCTCATGGAACAGTAATTGGTACCGA---TATGCTTTTAAGATGTTTATGTCCATTATAAAAGTAATACATCCTCATTACGGGCAAATTTGTGTGGTCTCGTTTTATCTCCCTCTCCATTCTCTTGGTCCAGCTTGTTCATCCA a score=28078 s mm7.chr15_random 398974 878 + 7075849 TTCCTTTCTGCAATCCAAATGAGCACTTTAGTCTTCTGTGTGCAATCAATCGTCTTGTGTTCTGGAGATCACATTCTCTTGGGAATAAGTG----GTAGTTAATACTGAGAAAAGTGTGTTTCCCAAATAGATTAGAGTCTTCTCTGGTACATAAATGACTCACTA-----AACCATGGATTAGGAGTTTAATGTCACAAATAGCATAGATTTCTT---------------AAGACGTGT--CACATAAGAACTCTCCCAGCTACTAGACCTGTAAAGAATATCA-TTGAAAGAAATTCCTGAGGCTCTCATCCCAGCCTTTATGTAACCTGCACTGTCTTGTTGAGCTTTACTAAGCTGCTCAGGAATGCCCTATC---TACAAA-GAGGTTGGTACCTAAACCAACACCTT------CCGTTTGGTCTGCCGTTCTAAAGCGGTGTGTGTGGCATTTCATACAGTTGTGTGCTCTC--ATTCAGTCTTT--------------GACAGCATT-ATCTCGGTGTTACTCTTACCTACCTAGTACTCAGGTCTGTATTTCTTTTAAAGCACAGTACCATCTTTGGAAACAAAGCCATGCTCTCTCGCTTTTCTTAGAATCAGGATGGAGGTGTGGTTTGGCCACATGAGCTGTGCTGTATAGAAATGTAACTCAGGAGCTTATACAATGTAACCTGACTGGGGTCCTGCTTTCTTTGGACACTTCCTACTCTGAACTCCCACTTACCT--------------CTTAGGGATCCTCATTCAGCC-TTAGTTCTCAAGTTAAATTTCATGTAACTTTC----TTTTTAATGTTGCCCAAAGTTCTTTGAGATTGGGAATGTTCTGGCCTGTGTTGCTAAGCCTG---TGAAACGCTTGTGAAGTCAAAGCCTGTTAAACTGCTAG-TTACTTGTTGTTCACAGCATCCCTTACTCTT s bosTau2.chr4 65187710 943 - 69556449 TTCCTAACTGTCATCAAAATGGGCCTTTTCATCTTATTTCTACACCAGACCATTTTGTATTCCGGTTATCACTGTCTCTTGGGGGTAGGTGCTCAGTAGTTAATATTCAGAAAGTTTCATTTTCCAAATAGGTTAGATTCTTCGCCGGTCAGTAAGTGACTCGTTGGTACCAACCACAGATTAGTAATT-AATGTCACAAATAACATACGCTTCTTTCCCATAGTCTGCTTAAGATGTGTGTCACACCAGAACTCTGCCAGCTGTTAACCTTTCCAAAAAAACCAGTTGAAAGAAATTCCTGAGGCTTTCGGCCCAGCCCGTGTATAACCTGCACTGTCTTGTTCTGTTTCACAAAACCACGCAGGAATGCCCCACCGTTCACAACCGGAGCGGGCACCTGAGCGAGCAACTCGATGGCACGCTCAGTCTGCCATTCATGGAATGTGTGTGTGGCATTTTACACAGTTGCTCTCTCTCTAACTTGGtttttttttttttttttaaaaGAACATTTGTCTCAGTATTGCTCTCATCTGCCTCATGCCTGACTCAGGATTCAGATTAAGCCATGATACTATTTCTGAAGAAAA-----CGTACTCTGGCTTTTCTTAGATTCAAAGGAAAGGTGTGGTTTGGCCACAGAAGCAGCATTGTGTGGAAATGTGATTCAGGAGCTTCTGCAACCCGATCTTAGTGGGATCTAGCTCTCTTTAGACACTTCCTGCTCTGAACTCTGACCGCCCTTCTGAAGCCACCCGCTTCAGGCTTCACACGAAGCCTTTCACTCTCTATTTACGTTTCATGGGACTTACACCTTTTTTCCTGCTGCTGCGAGCTCCTTCAGATTAGTAACAAT---GACTCT-TTGCCAAGCGTGCCTCGCATCATTGGAGGGGCCAGACACGGTGGAGATGGTGGCTTGCTTGGTGAATGTAGTGTCC--TGCTCTT a score=16456 s mm7.chr15_random 399938 1044 + 7075849 ACAGAATATACTCAtgaaataatgaagtattcatataaaaagaagccaagagaattt------------------------------atagccatgactttttaatattgggaatacttcaaaaagaaagcaaacaattccaaaaggaacacctgagatacaagaaagagttatgggtacataattggataaat--gtctaaataggtctTTAATCATAATAAATGAAAATGGAAAATTTCACCATTTAAAAAGCAAAAAATATGAGATTAGACTTGA--AAAACCTTATTGAAAACCAGCTCTGTACATTTTCTTGAAAC----------TGATCCTctgctgataggagatataaaat--catgctgttctttgggattttggcattaacccatgctatttaacatatatatatactatggaaaccctgcctttccatgtctggttacatgcttcagaaaagtt---ac-----tgcactaggattcatgttagactagtaacagcagcactatttgcaacagccaaaaaaattacaaatagcccaaaggttcacctatcaaatgctg------------aggtgtactttggttaacatcgtatggagttaaatgaaagtgagaattgaaatgaataagctctaacaataagcaataatatgcacaaatcttagaaacaata--gagtgaaaatga--------------tacaaatcaTTT-----CCTTATACTTATGAAGT----------------------GATACAGACAA---------ACATTGTTTGTATTTATT-ATATGACAAATCTA-ATGTTATTAAAGCAGATAAATGAAACATAAGAGTTAGGACCGTGGTCACCCATGAGGACAAAGAGGTAAGGGAATCATATTACAGGTAAAAAGAAG-----AAAATA---------GGGTGGATTTGTGTGCCTAGGTAGCTACTCCACCATTAATTCCTGACACTAATTCCTTCACAAAGAGTCTTTGGACTCTTTGTTGAGACTGATACTGATTTTTTCTACAATTCTTGAAGGTTTTTCTATATCGTGTTTGCTATGGAGGCACTGGGCTGAGAGTGAAGATTTTGGTGTGATAGATAAAAATCTCTCCTTGTTCTTAGGAAGAAAATACAT--GCTAAGCCAGTAAACAGGTA s bosTau2.chr4 65189496 1108 - 69556449 ACAGAATACCTTCACaagacaaagacatttttagataaacaaaaatcaagagagcttcctttcaccttttcactaacgaaacttctaaggggcataacttctaaa----ggacatagtttcaaaaagactgaaactatcttaaaaggaatgtctgagatgcaagaaaga---atggatacatacattggtaaacacgtccatataaattgttaatcacagtaaatgtaca-----aaactcgtcagttaaaagatagagaatgttaggttggatttttttaatattttatgtaataccaacta-gtgcttttccaagaaacatctcaaaTTTGATCCTctgctgttggga-acataaaatggtacactgctttcaagaat---gacatta--ctgtgtacttcagcgtattcata--ccatg-agatcttgtaattccactcctagttacatactttacagaaattcatacatgtgtgcaccaatattca----ggaatattcatagcaacattgtatgtaatagc----aaaacctgagaaaaccaaagtgttcacagaaaaaaggatggttcagtctctcaggtata------ttcacgcagta--aaattatccagcagtgaaaaggaaaatgaatgaacgatcactgtagacaataacacggatgaatcttagaagcagtactgagtgaaaaaaaaaaacgataacatatatgaaatttttaaatattttaaaattataaagtatatgaaatattataaacttcagaaacaagtaattactaaatacattatttaggcatatttatgtgataaaccaataTTTCTTGACAGCACGGAAATGCGA------------AACTCTGGGGACACAGAAGGATAAGGAGGCAAGAGACTAGAATTACGAGCAGTGAGGAATGTTAAAAACACCAGGAGGGAGAAGGGCTTGAGCACCCAAATAGCTGTAAAATCTTCAGAGCCTTGCAATCACC-------------TCTAAGGACTTTTTT---AGACACATACCTTTATTTAACATGATTTCTTAAATTTTCGCCATCTGATTTCCACTGCTCGGGCACTGAATTGAGAGTGCAGAAATTGATGAGACAGATAAAA------TCTCAGTCTTGTGGGGAAGATGGATGGGATAAACAAGTAAACAGTTA a score=6077 s mm7.chr15_random 403539 498 + 7075849 TCTATTCTTCCTTTGATTTCGTACAAATGCCCACCTTAGCTTCTGTGGTGCCGTGGTGCCCTGCTTTTCCTCCCTATTGCCTGGTTCACTCCTGTTTCATGGATGCTCTTC-CTGTCTGGCCAGGAGCTTTGCTATGTCTT--------TGTGTGCTCTCTTGGCTAGCAGCCTCCCC---------CAGGAGGTGA-----------CCCTGCAGCCCTGAAGCTCCCCTTACTTGCAGCTCAGCCCAATCTCAGCTATT---CTTCCTCTTAAGCTACAGGCCTGC---------------------------TAACCGGATGTTTCCTGCTAACCATTTCATTGCCCAGACCAGAAACATGGAATTCATCCTAGGTATTTTTCCTCTTCTTCCTGACTGCTAAATCTG------------CTATTCCTCCTGCCTCTCCTTCCTCCCTTTTACTCACAGCCCCTCCTTAGTTTCTTTAGGTTGTCTCCATTTTTCTGGGTAAGT-CCAGTCTTTTGATTGAG----TTCCCTGCATCCAGGACCATCTTCAGTTCTAGCCTCTGTAGTTGC s bosTau2.chr4 65192700 535 - 69556449 tttCCTCTCGTCTTTACTTCTTATAAATATCCACCTTGGCTTCTGTGA---CACAGTTTCCTGCGTTATACCC----TACCTGTCTCACTCCTGTTTACAGACTACCCTCCTCTGTC------------TTCCTCCGCCTTCAGTGCTACATACGCTCTCTTGCTCAACAATCTCCTCTGCTTCCTGTAGGAAGAGAGGGCTCATAGTCTTTCCAACTTGG----TCCACTCCCTTGATCCCCAAACCTGCATATGCAAGTGGACGGCTTCACCAGTAGCAAGCCTGCATGACATTTCCCTTCTGGGtccccattcagatcgatg-gtcccaccatccaccctgtcacccaggccagaaacctgggacttaacccacatttctt---ttttctccccttctgctccatttgactggtttaaaattattcctcctgcttctcatccc---------ctcactgctgtaggttggtaggttc---ttgtcccaaggcagccagatcattggcagccttttgattgagctctttctcagcctcaaggagcttctccagttttatcctaggcagttac a score=67822 s mm7.chr15_random 404162 2414 + 7075849 aaaaggaagtcggggtttgatcacaggttcctagatgctagacctgtacacggtactaagcccgttgTCAGTGGTTTGATGTCTGCCTCCATTGCCCAGCTG--AGCTTTGGGGAACAGATATGGCGTCTCTGGT-----------CATCCTCACAACGCAGAAGCAATGCTTGTCCTACAATAACAAACCCTGGTATACAAATGAATGGTTGGAGTTACCA---------------TCGAAAAT--------AGTTACATGAGCAGCAATTACATG------------TAGAACAAACGTGTCTGTATCTTGTCCTTCTTGTGCATTGTGTGTGAAGA---CACAGAGGCTATAAAAGTGTCACTG-TGCCCTGAGAAAAACAGAGCTGTTTGAGAATCATATCTATTTGAGAGAATTTAAGTGCTGGGC-TTAAGTGCCATTCTTATTCCTCATCTAAATGGACAGTACTAATTTTTATAAAAATCAATGTATCATTTTAATCAGCTTATCTTTGAATTTTGTGTTATAACAACTAATGACTTC-TTGGTCCAGTCATTGACTTGATCAATGTGTGGGGTCAGATACACTCCCTTGTGTTCTGAGAACTGCCACCTGCTTTTCATGTCAGCCT-GCTTTGCTGACATGGGCTCCAAAGAACAGTGAAAGTTCTGTGTCTCTGAGTGTGAGCTAGTCCATCGTTCAGA--GAGAAGCAGGTTTCCCAGTGGTGCTGAAGCTGGCATGACAGCCATTCATCTC-------TTGTCTGTATGCAAAAGAAAGATTTCAGTTGCTATTT-AAATGCAAAAATGAAATGCTTCAAAAATAGGTGTAGGCATCCTGTGGTGTCTGAAACT---CTTGCAGAGAATCCCTGAGACACACTCTCTGATGTCCTTTGCAATAGGAGCATGCTTAATTTCATAAACCAAAGCCCATCTAGGAAAGAAGAAAAAAAAAAAAACATTTTCTCCCATC--CATGCAAAAGCTTAGAAATGAATGAAGAAAAAAAT----TAATGATGTAAATATTAAGAGGTTACTTATCTATTATAACACTGGGCCACAAGTTGACTAATTAAAAGGAATGTAGGCTGGAAGGCTGCCACGAATCT------TTCACTTAGAGGGCCAT-GGCTGAAGCCAGTGATTGTGTGTGACAGACTTCAGGAAGAATGGTACTGTGCACAGACTGTC-AGATGAAGCATGCTCTTCAGAATTACACCAACGATGATGGGGTGGCCCACGGGCAAACAAAATGGTTAAACAATACATAATCAAGTTTTTATTTGGTATTTCCTGCGAGGCCATACCAGTTGCCAGGGAACGTACTGTATTTTTTAATTTGGTTGTATTAATTGTTGACCGTGGCTGGCAGAGCCCCAAACACGGACAGATATGGGAGAAAATGGCATCTGGACATTAATGCTCTGAGTGTACTGGGGGGTAGTGGG--------CACAAAAATTACAGCATATATCAGCAATTTTCAAGCTAACGATGTGCAGATGTGGTAGTGCGAGGGAAATGGAGCCAGACTGAGCCTACTTTGTTCGCTGAGAGAGG-CCCTCTGTAACATTCTTTTTAGCTGTGCATATTTTGTCTTCATTTGTACAGTACTAACTTTCT-TACTGTGAGGAGAA----AGTTCCAGCTGGTTGGGCCTAATAATTCTATGGCAATAATTAAAGCTCATGAACAACTGT---GTTGTTAGCTGCATAGAAGTGACTTCACAAACTAACCATAAGCTGAACTGTT-TTTTAAGTGGCACACCATTACTG--CAAAGGGTGCCCATAATTATTTTCTTCGATTTCGCGACAGTTTTTTTTAAAGGTATCATAATCGTTTATACAAGCAAA----AGACAGTGTCTTAAAAGTTTCAGATACATTGGAGAGTCCAGCCTGAGAGTGATTTTAATGCACACTCTTAGCCTATAAATAAA--TGTCCTTAACTAGTTCGT--ACCATGAACATCTGTGATAGAGACCGTCCCACCAGCTAGCTACTTTGGGACTTGGTTTTAAAAGTATATAACTAGCCACTTGCAAAGATGTGTTTGAGCCTGGGGATCTTGttgtttaaaacaagatctcgtttgtgcagattaagctggtatcagagtcgtcacagcctttccacctcaacctcccaagttctgggattgtgagcacaggcaGCTTTGTGATTTTGTTTTGATTCAGTAGGGCAGGGGAAAGTC-CCAGAGTAACACTGATCCTTTCTTCAAAGGTTGGTAAGCCTGGAGCCCTCTCTCTAACAGCAGTGATGTCATGTGTATCAACATGAAAGACAACTCCTGGCCTTCCCAGGAACTTTGGTGGCAGCG--------GGAGAGATCCATCTGAGTGCCTG-GTGGC------------------------CAGTTCATGGG----------CTGTGAGTTCTGACTCTGATATGTAGCTAGCTTGGATTTGGCTCTGT--TTACTAATGTGTTTTGTGCAT----------GCCAGGATATGGGCAAAGTATCCAG-ACCTGTCTCAGAAGG s bosTau2.chr4 65193628 2385 - 69556449 aaaagaggaccaggatttgaacccaggctcTTAAATCACATACCTATAC-TGGCAC--AGGCGCTTATGAgt----------ctgcctcctctgctcaactgtgaacttttgcgagcacattcagtgtcttcagtaatctccacgtcatctttatagccaggatccagtacttgttacacattggta--cattagtgtatatatgaatgaatgaatCAATCAGTCATTGAAGTAATTTTGTAAATGTCTCATAAACTGCATGAGATGTGATACCAAGAGTATCTGGGAGTAATACACATATATCCGTATTTCACCCA-CGTGTGTTTTGTCC-TGAGGATCTCACAGAAG---TAGAAATGTTATTCCTGCCTTTAA--------------CTGAGAAACTTAAATAGGTGAAAGAACTTAAATATTGAGCATTAAAAGCTGCTCTTATTCCTGATACTGACGGACATTATTCATATTTATAGGAAGCAACCTATCTTGTTAAG-GGTTCATC----------GTGTGCTGACAGCTAATGGCATCAGTGGTTTAATTATTGACTTATTCTAGATCTAGAG-CAGACAGACTTCCTAGTATTTTGAAAACTGCTGGACACTTTAAATGTCAGCCTTGCTTTGC---AAGGGATCTTATACAAGTGTTAAGCTTCCCATCTTCCGATCATCAACTAGTTTATCAGTTAAAATGGAAGGGAGGCTTCCCAGCCCAGTTGAAATTGGCAAGAT---TATTCATCTTGCCTATATCGAATGTATACATAAAAATGGCCTCAGTTCCTATTTTCAATGCAAAAACAGTATGCTTAAAAGATAGATACGGGTGCCCTGCAGTTTCTGGAGCTGCCCTCATGGAGAGTCATGGAAACATGGTCTCTAGTGTGCTTTGTAATAGTAACATGTTTA-TGTCATGAACCAGGACCCATGTAG-------------CCAAAAAGCTTTTTCTGCCGCCACCATGCCAAGGCTGACAACTGAATGAGGGAAAAAATGAATTAATTGCATGAATATTAAGAGGTTACGTATCTATTATAACGTTGGGCCCCAAGTTGACTAATTAAAAGGAATGCAGTTTGGAAAGCTGCCACAGGCCTGCTGCTTTCATTTGGAGGACCGCAGGCTGAAGGCAGTGGCT-TGCGTGCCGGGCCCAGGGAGCGCTGGTGCGGCGCACAGGCCGTCCACACGAAGCCTGCACGTCTGCGTTACACTGACGACA---GGGTGGCCCACAGGCAAACAAAATGGTTAAACAATGCATAATCAAGTTTTTATTTGGTATTTCCTGCGAGGCTGTACCAGTTGCCAGGGAGTGCACTGTATTTTTTTGTTCGGCTATATTAATTGTTGACCATGGCTGGCAGAGCACCAAACAGGGACAGATAAGGAGGAAAATGGCATCTGGACATTAAAGTCCCAAGTGTACTGGGGGGTGGGGGGAGTACACACACAAAAATTACAGCATATATCAGGAATTTTCCAACTAACGATGTGCGGATGT------------GAAAAAGAGCCAAACTGAGCTTTCTTTGTTCGCTACGAGAGGCCCCCCTGTAACATTCCTTTTAGCTGTGCATATTTTGGCTTCATTTGTACAGTTTTAACTTTATGCTCTGTGTGGAGAAGCTCAGTTGTAACTGGTTGTTCCTAATAATTATATTGCAATAATTAAAATTCATGGATAGCTGTTAGGTTCTTGGTCATTGAGAAACTGCTTCAAAAACCAAGTCAAAGCCAAAGACTTCTTTTAAGCGACCTTTCATTTCTGTCTAAAAGATGGCTATAATTA-TTTCTTTGATTTACCAACAGTCTTTTTAAAAGACA--AGATTCATTGATGGAAACAAAAGAGAGACAATGTCTTAAAAACTTGGGGTACGAGGATGGG---GGGCAGAGGA-----TTAATGAGATCTTGTAGCCTGCAAATAAAATCTTCCCCAACTGGTTTGTAAAACATGAAAATCTTTGACAGGGACAGTCCCCTTTGCTA--TGCTTTAAATCC---ATTTAAAAATGCAAAACTAA-----TACATACATATTCGTAAATCTG--------------------------------TTGCAGA----------AACAGAGT-ATGGCAGTTTTGTGACCTC-----------------GATTAGAAA-----------TCATGTTACTGGTTTAATTGAGTAATAAAATGGAACATCTCCAGCTGAACACAACTCCCTTCTTGAAAGACTGGTCAGCCTTGGGGGTCCCCAGTAACCATGAAGATG---------ACAACATGCACTGAACCGTTAGAGCTGTGAAGTATGTTTGGTAGGGGCGTCTGTTGTGGTGTTACTGATCTGTGTGTGTGTGTGGCCCTCAGGTCCAGTGGTCATACCTGCAGCCCCCGGGGTTATGCTGCCTTTAAGTTCTGACTCCAGCATGTGGCT-------------CCCTATagttattagcgtgttctgcacatcagttttctcccgagaatatgggcaagacattcagtgcctacatcacaagt a score=3918 s mm7.chr15_random 406613 331 + 7075849 CTCTTGTGAAGAAGCTCTGGGATATCCTTGAGCTTCTCAGATCA-----TTCCAGTC--TGTCTGCATTAAAGTTGAATACGCTTAGTTATTCATTGTTGAAATTCCAAAGCAGAAAACAAGAGAAAGGTTATGTGGTCTGTAATGATAGCCTAGAAAAttgttgttattgctatagtagtaattgttgttgttgttgttACTGCTAAACATTCCTTGAAACTACAATTTTAAGATTGATTGATGGATTGATTGAGGGGCCATGAACAAGCATATGCTGagag-gacaacctttgggagtctgctctctcattccaccatgtggat-cttgacgagctcg s bosTau2.chr4 65196110 323 - 69556449 CTATTGTG-TGGAGCTCTGATGTTTCTTTTCGCTTCTCAAAATAATTGTTTCTAGTTAGCGTCTGCATTAGACTTGAATATATTTACTTAATCACCATTG-ACTTCTACCGTCGA---------ACAGGTTGTTTTGTCTGTAATGAAAGCCAAGATAGTGGTTTTGTTTACTCT--TAAACATTCTTGGAGAAGCTGAAATTTTAATACCTGTTTTCAGAAGCCCTTATTAAGACCAATT--TGAGTTGA--GAAAAGCTGAAGACTAGTATTCTCAAATAGCGCCATTCTTCTAGAGATGGACTTCTAACCACAGGATACGCATACTTGATGATGTTA a score=62893 s mm7.chr15_random 407207 2174 + 7075849 CCACTAAAGGTGTGGCTGTAT------TGATAAGTGAGTAGGTTCCAAACATCTTTAAATTCACAAAATTCCTTATCCAAAACAAAGTACGTGGATTAATGGGAATGAGACTCAGATACCAGATCAACTTATTATTTTCCCAAAG-TAAATCTTAACTCCTGGAAACATTTTAAGCCCTTAAATGATATCTGTGTTATCCTGTCTTCATATTAATACCTTTATAACATCATTAAAATCATGTATTAGGGGC---------TAAGAAAATGTATGTCCTCATAGTATCTTTGCTTTTTAGCATTAGGAATAAAA-----ATTAGTACTTTTCCATTGAAATAGTAACAACT----ATAAGCCAGATGTAGTCAGCTTTGACC---AACTGGAAAACTGCCTTTACCTTTCAACAATTGACATTTTCTCTTGGGCTGCTTTTTAAGCCGAGGCTGTTAATGATTTAGCCTCTCTTTAATTTTAAGCACTGTTCTTCTAGTC---AGATCCCAATAGGAAGCCCTGGTGCCTTAGCC-TGGCTTCCCATTGGCTAACTGGGGAAAGGGCATTTCTGCATAAATTGGAAGCTTCCTTCTCCCCTGGAGACCAAATATGCTCCTGTTTCCCAATCCCCTGGTTTGTAAGCTTGAATCCATTG-CTCAATCTGGAAACTGTCACTTTGTAG---ACAGCACACATGGAAAGCCAGATCCAGGGGTCCCTGACATGCCCATGGGTTTGACGGCAAAGTGAATGAATACATGCATTCTTCCTAGTCCACTGTTTCTGTGACGCTCCAGCTGAAATCAGAAACCAATGTTCCTGCGA--GATGTCATTC----AAAAGTATTTCCTTTGTGAGACTCCAGTGAACACAGAACCCAAGGGGTTAACCGGAGAGCAGCTTTGAAAGC--AACTGAAGATCACTGTCAGAAAGAGCAAAGACTTTTCAAGCCTG-----------------------CTTCCCTACCCAGGGGATTGTAAACAATGGCTCCTGGCCACCGGCTTAGTCCCATAGCACCGAACTTATCTGTGCTCACGGC--TCACGGTTCTGCTCTTTC---------ATGTACGCCTGATGCCATCCCACTCTCTTGT--------CAGGCAACCC---------------AAGGCAAGGAGTTCTGCCCTGCAGAAG---------ATGAAGGTGCACCTGTTAACGGGGGCTCCTTATGCAATCAAGGTCCTGCTGGTAGTCTGTCTTTCTCAGGTCTAAGGAGAGGG--------------CCCATCATGTTCCACAAGTG--CTGTTATCAGCCATTTGCTAGTAACTAACAATAGTGCCCACATCTCTTTGTCCTTTGGCTCAATCTAGGGCTCTCAAATAAGAAAAGCTGCCAACTCGGAAGTGCCTACTGCCCTGAGC-CTTGCTTCTTATGCTTCCTTTCTTTAAACAACAACAACAAACCAGCAGAGATCCTTAGTCACCAACAAAG-----GAATGAGGCTCCATATGCATAATTTAAATAAA-CTACCTTCATCTCAGGATCATAGTTAATTGAT------GAAAAGGAACCAAG--GATGCACTGACTTA-------------GTGTGCATC---AGAAGTCTGCAATCTGCA-GTTTAATCATTAGTCTGACTGACT--------AGAAGAGACTGGAACTCCCAGAGA---GATGTGTGGCTT--GTATCCCCCACTTGAACTGTCTAGAATGTTGTAAAAAGTTTTAGTATTATTTGACCTCCCTGAAG--ATTTTATGGGATTACAGTTATTTCACATGATG---TTTCTCCCTTACGTGAATTCTGAAGGCAGGAACACATGA-----TCACTTTGATAGACCCACATATCATAGCAAGTAG-----------AGATATTATTCCCTTATATAATCTCATTTTGATAATGTCTTGTGTGTGTGTGTATCTATATTTTGGGGGCAAATATA--------GGTCTTATCTTTATAAAATGAC--CTGTGAGCATATTTTATAATAAATTTGGATGTTGATCTATAAGAACTCTGTCACTCAATACACATTCCTGAGTGAACAATGTTCCCATCAGTTGTGACAATAGCAGCATAAGCCACCACTCCTAACTGTATGGCACAGTTGTACAGCTATG-GCTGCTCTTGACTGTATAGTTGCAATTGGTG--CAATGTGTGAGTTTGCCTTTT-CCCCTCAGTCTACATGACACTCAAAGGTTTTTCACAGACGTTTCTGGGATTACAGTTTTGTTTTATGGAATCACAGATTTTCTTGGGTAGTTAACTAA-------------TGTCCTGTTGGTCAATATTCTTTTGTTTCAA-TGTCAGGTTCCTGAGA s bosTau2.chr4 65196716 2285 - 69556449 CAAATAAAGGGACGACATTATTCATGATGATCAATATACAGGTACCAAACATTTTTAAATCCACAAAACTTCTTGT--AGAGCAAAGCATCTGTTAAAATAGACACAAGTCCTTGACATCAGACCAGT------TTTTCTCAAAGCTAAATCTTGTGTCCTGAAAACATTTTGAGGTCTTAAATAATATTACTGTTG-----------------------AATAACATCTTTTGAGTCATTTAGGAAAGACATACATATATATGGGAAGTTTTTTTCTAGTGGGATCTTTACATCTTAACAGTAGGAATAAAAGCTTTATTAATTCTCTTCCACCGAAACGGTAACAACTAATAATAAATGGAATGCGGTCAGCTTTAACTTAAAACTGGAAGACTCGCTTTTCATTTCTCCAGTTGGCTTTTTCTCTTCGGCTGCTTTTTAAGTCG-GGCTGTTAGCAATTTAGCATGTCTTTAATTGTAAGCACCATTCTTCCAGTCCGGAGATCCCTATAGGAAGCCCCACTCTCCCAGCCGCGCCCTCTCATTGGCTTGCTGGGAAAAGAGCATTTCTGCATAAATTGGATGCTTCCTTCTCCCCAGGAGACCAAATATGCTCATGTTTCACAATCCCCTGGTTTGTAAGCCTGAGTCCGTCGCCTGAAGCTGGAAACTTTCACTTTGTAGAACACAGCCCATGTCGAAACCCAGACCCCAGAG-CCCCAACATG-CTATGGGTCTGAAAGCGGACTGA--------ATGCATGCTTGTCAGCCCAGTGTTTCTGAGCTGCCTCAGCCAAAATCAGAAACCGATGTGCCTGAGAGTGGTATCCTCCAAAGAAAGGTATTTCCTTTGTGCGGCCCCAGCACACACAGTATCCAAGGGGTTAACCTGAGAGCTGCTTTGAGAACGGAGGCGAAGGTCACCGGCGGCAACAGCAAAGACTTTTAAAGCCTGCCGTCCTGAGCCTTTCACCCTGCCTTTCCCACCCAGGGGATTGTAAACATTGGCTCCCGGCCACCA----CGTCCCACAGCACAAAACTTCTCTGTGCTTTCAGCATATACACTTATGCTCTTTTTTTTTTTTAATGGAAG-CTGAAGCAAAGGCGCGTTCTTGCTGGGAGCACAGAGAACGTGTTTCTGTTCGGGGAAAGGAAAGAGATCCCATCCTGCTGGAATGTGGAAGCATGCAGATATGCTTATTTAGCGGTGCTTCACATGGAACTTAGCCGCTGCTCTTAGCCTGTCTTTCTCAAGTCAAAAGAATGTGTAGAATGCTGTCACTTAATCAGAACCCAGAAGAGCTCTTTTATCTGCCATTTGTTAGTAACTAGCAATATTGCCCTTATCTCTTTGTCCTTTAGCTCCAGCCAGTGCCCTGGGATATGAGCA-CTGGTAACAAGAAAGCACTTATTACCTTGAGCGTTTGCTTCTTGTTTTTCTTTTTT---------------AAAACTTCAGAGTTCTTTAATCACCATCTAAGAAGTTGAAGGGATTTTTTTTTTTTTTACTTAAATAAAGTTGTCTTAGTCCTGGGACCATGGTTGTTCGGTGATGTGGAAAAGAAACTGAGATGATTCATATACTTACGCTGCCATTGATACCTGCCTCTATAAAAGTCTGTTATCCACACAACTTGTAAATAACCTTTATGAATTCAGTCACATGAAAAAGTGGAATTTCCAGAAATATTATACGTAGCTTAAATTTCTCCTTCCTCAGTGTTTTAATATTTTGTAGGGGG-GTTAATATCCTTTCACCTATTTTAAGTAATTTTATGTCATTTCAGTCATTTAATATAATAGTTTTTTTCTCTTCAGTGATTTCTAAAGAC----ACAGCTGAAAAATTCATGGTAATCAATCCATACGTTATAAT-AGTAGCTCAGGGCAGAAAAAATCATACCC---CATGACATTTTTTTAAAAGTG---------------------TATTTCAGAGGCAGGCATATAATAGCGTACCCGTTTCTTCTGAAATGGCTACTATGAGCCCATTTTGGAATAAATTTGGATGCTTGCCTACAGAAA---GGTCAGTCACTAAACATTCCTGTTTGAGTAACGATGC--TTGATTCTGAAAAGCCCGACATCAGCCCCTGCCAC-------ATCGCACAGACATGCAGACAGGCTCTGCTCTAGCC--TCTAGCTGCAGTTGATGACAGATGTGTGACTTTGCCTTCTGCCTCTCAGCTGAAATGACTCTTAGAGGTTCTTCACCAACTCTTCTGGAATTCCAGTGTTGCTGTATGGAATCACAGAGTCCGTTGTGTACTTA--TAAAGGTCCTTTACGTTTTCCTCTTGATCAGAGTTCCCTTTCTCAAAGTGTGACGGTTCTGTGA a score=2128 s mm7.chr15_random 409949 50 + 7075849 TGTATCGGTGCATAGTACAGTGTCCAGGTGGTGCCAGTGAGCATGTAGAA s bosTau2.chr4 65199025 50 - 69556449 TGTATGGGTTGACAGCACCACGTCCAGGTAGCTTCACCAAGCAGGTAGAA a score=6587 s mm7.chr15_random 410457 417 + 7075849 acaAGACACAATAATGATTTA-------AACAGAAGAGAAGCCCTGTTCTCTAAGTCTCAGCCTAGAACTTCCTCCCTTGGTGACTCTA---TTGCTGTCCCCTCACGTGGCATGGTGA--TCCCTAGTACCCAAAGGT-------AAGGTTACTAAGTGGCTG-----------GTGGGCACACCTAAGCAGGTAGGCAT---CATACAATGAGTGTGAACAG------------------AGG---------------------CCTACT---CCCCAAGCTGT--GGTGACCAGCATTGCAAGC----------------TGTCA--CTTCAGAGTCACTGCA-------TCTTGCAACTTCT-------------CCTCTCATGCCCACTTAACATGTC---------------ACTTTGTATTGCAGTAGTGAAGTCTAC-TCAGAGCTGTAACAGTATGACCAAAGCTCTTCCCAGAGGCTAATTCATAGCACTAACTGCCTCTATGACCCAATGACAGAGACTGAGTATAAACATAAAAGC s bosTau2.chr4 65199411 541 - 69556449 acaaaacacagatattatttactgatatatctggagctaaaaccaggtctctagatttcagtccaggactgtttctCTTACTCCATCTAGCCTTGTAGCCCCTGTACT--GCATGATGAGCTCCCTGACAACCAGAGGTGGGCATGAGGTTCACCGAT--GCTGCTCTTCACACCGTGGGTGTGCCTCCATAGGCTGAAATTGGCAGA-AGTGATTATGAGCAGGTCTTTTGTACCCTGAGCAGGAAGTAGCATCAAGTCTTGGTCCCTACTTATCCCCAAGGTGTCTAGTGACTGGCATTTCAACTCTTTAGCTCATCGGCTTGTCATGCCTCAGTTTTACTGTGATAAGTTTCTCTCAATTCCTATAGCATTCTCTTTTTCTCTTGCCTGTTTAACATGTCTCATATTAAAGACTGACTCTACCATACTACAGTGAACTCTCCATCAAAGCTG--ACAATATGACCAAAGCTGTACACGGAGGCTAACTGAGAGCACTAAATGCTTTTATTACTAGATAAGAAAGACTGACTCTAACTGCGAAAGC a score=1451 s mm7.chr15_random 410966 58 + 7075849 TATCAAACAAGAAAATAGGCCTGAGACATGTTCCCTCACAAAGACTAA---CTAAAACAAT s bosTau2.chr4 65200162 58 - 69556449 TGTAAAATGGAAAAAGAAACCAGAG---TTGTCCTTCCTAAAGACTAATAGCAAAGACAAT a score=5562 s mm7.chr15_random 411024 492 + 7075849 CCTTTGGCAAAACTGACCAGAGAAAAGCAGAGT-CTG----GGGGCACATCAAAGCACTTCACTGTTAGGTTGGAGAGCTTTTAGAACAACCTAG-GGCTAATGAGACAGACTCAGGCAGGGTAGGAAGAAGTTCTAGCTACAGTACC------------------------------------------CTTAGGCTCAGCCTCCTTCCACCCTTGTTTCCACTAAGTGGGAa-------aacaaacaaacaaacaaataaataaaTGTGTCTGCTTTATATGTGTTGTAGTTTTACTTGTAAACAAAAGACCAGGGAAAATATTCCC---GATAAAGACAGAAGATAGCTTGGAACTATACaaaataaat---atttataattttCAA---------------TTCAC-TTTGTCACTGTTGCCTCACAAGCTTTGTGCTA-AGTTTGAGAACTAAGTGCTGGAGT------GTGTTTGAGGAGACATGCACTGCACCTGATTGGTTAATGGCTTGGTA-GATGAATCAAATGTGGCAAAAAT---AAAAAaggagg------agaaggaagaaagagaaaaga s bosTau2.chr4 65200446 570 - 69556449 CTTCTGGCAAAGCTGCTCGAGAAAAAAGAGAGTGCTATTACGGAACACATCAGTGACCTTTGCTACTGGCTAGTAGGCCTTTTGAAA--ACTTGGTGGCATGTGAGACTGAA-CAGATAGAATAGGGTGCAGTGCTGATCAGGAAACCTGGAACATCAGGGTGCCTCCTCTGACTGCGTGCCTTCCCGGTCTTAAGCCTAGGCTCC------CCTTGTCTCT-CTCTGTGTGACTCTGTTCAGTAACCTAGGTAAGAAA--AACAGATGTCACCTATCTCTGTATGTTTTAGGTTCTCATGCAAGCAACAGAACAGAGAAAATATATCCTGTAACAACAACAACAAAAAGTTTGGGACTGAGCAAAACAGATTGCTCTTATTATTTTCAAAACTCCTATAAGTCGTTCTCATCAGACCCTGTTAGTCCATGACCTCTGTGTAAGAAATTAAGTGCTGAGTGGTGGGGGTATGCAGTATTAGGAGAAAGAT----TATGCTTGAGAGGTTTATAGTCTGGTGTAATATGGTAAGTGTGATAAAAGTTCCAATCAATGAGGTACCCTGTAAAGAGCAAGGACAAAAAA a score=16191 s mm7.chr15_random 412223 741 + 7075849 CTTCCTCCACATAGGAAACCCTGCTTTCCTCTGTATCTACCTGAGGCTTGTCTTTGAAGCAGTTTACTCCCTCTGCTGGCTCTAACTTTACAATGA--GAA--CATTTCA-AACTGGAGCTCTGATGAGGAATACGGGGGACTGCCTGTTT---ATGTCCTTTGTGTTAGGGTTTCTCCAAGATATAAA-----------GTTAAACTCC------------------AAGC-CCAAGGAATCAAGACAGG---CTCTACAATTC-TTTGAAAACAATAATATAATTCTC--ACACTAGTAATGAGTTGCTAATTAAGAGAGTCTGGCATGTAGATTTAGAGTAC---ACATAGTAGGTGCTTGGTAAATGTG----AGTTTCTCGGTTGCAATTCTA-CTTTGTTATACATAGATTATAGATACCTGGTTGTAGGAGCTTTAGTTCAGCCATTCTATTTAATG-AGTCCTTTGTGTTTCCATGGCATTTCCT-----TGGTGCC------TGCTTAC---AACTCTAGCCTTGC--------------TCCATTCGCATTATCCT--CTGGGATATGAAGCCTTCCTAGACAAGCCTGGCCTAGGATTTGTCTTTACAGTCTCAGTCCCTGTTGTGACAGGTTGGTTACCCAGAGAAAATGTTGTTGACCTTCAACAT----------TACAGGTATCTTCCAGAA-GATGTGCAAGGGGAAGAAAACT---TCAATCATTACAGTTTTCTCCAGCCTACCTTTATCATGAAGA------------------------CTTGAATAACACTTACCTAAAAATGAGTGTCTCTGTA----AAAACAGAAATAG--TAGTTAATATGGA s bosTau2.chr4 65201524 832 - 69556449 CTTTCTTTACCTCTCAGGTCTTCTATTTCTTTGTATATACTTGAGGTTTTCCTTTGAAGAGGTTTACTCCCTCTGCTGGTTTTAACTATGAAATGAATGAACGCATGTGATAAGTATATTTCTGATGACAGATCCCAGGGGTTGCTTGCCTGTGGTGTTCTTTGCCTTAGACTTTCTCCAAAGTGTAAACTTCTACTTTTGTTTGACTCCCTCAAATTCTGGATATAAAATCGCCCAGGAATC-TGAGAGGATTTTTTATATTTCTTTTGAGAACAAT-ATGAAATTCTATGAGACTTGTAGTAATTTGACACTTA----AGTCTGGCATGCATATTTATAGTATATAATATAATAGATGCTTAATAAATATTTATCAATTTCTTGATTGCAGCTGTATTTTTATTGTATACAGATTGTGCATGCTTTAATGCAGGAGTAATAAATCACTGATTCTTTTTGATGAAGTCATTGGTGTTTCCATAGAGCTTTCTCCATGTAGTTCCACGTAGTTCTTACTGTAGTTCCAGCCACACTGTAATACAGTATTTCTTTTTATATTTGCCTTGCTAGACTGTGAAGCCCTCCAGAACAGGCACTGTCTGTTATTTGTCTTTAGAGTCTCAGACCC------------------------------TGTTGGTGAACTTCAACATATTACACAACTAAAAGCTTCTTCCCAAATGGTGTCCAAGAGCCAGAAAGTTTAATTAACCAGAACTGTTTTCTCCATTCTACTTTTACCATAAAAAGGTAATTGAAGGTAAATAACTTATTTGAAATACCCGCTTTCTAAATGTGAGCACGTGTGTACTACAGAATATAGTTAGTATAGTTAATACAGA a score=6741 s mm7.chr15_random 439975 95 + 7075849 GGTTAAAAAAAA---TTAGTCATTACCATGAAACATTGGGAGAAGCATTTAAAGGAGTTGAATTGGAATTCAGTGACTTGGATATTAAATTTAAAGAT s bosTau2.chr26 27676514 98 - 35715000 GGTCAAAAAAAAGTATTAGTCATTACCACGAAACTCTGGGAGAAGCACTTCAAGGAGTTGAATTGGAATTTAGTGGTCTGGATATTAAATTCAAAGGT a score=10559 s mm7.chr15_random 440309 186 + 7075849 TATTATTGATGAAGCAGAT-AAAATGGGAATGACTACTATCTTTGAACCTACAAAAATTTTGAAACAGATTTCAATGAAAATTAAATTGCTGATATTAATCTAGCTAGTGAAGGAGAGGTGAAACTGGTTCTGAATTCTAAAATACAGATGCTGTAGTCAGTAA-CATGGGAAAAAGTAGATGCAGAA s bosTau2.chr26 27692299 188 - 35715000 TATAGTTGGTGAAGCAGATGAAAATGGAGAAGATTATTATCTTTGGACCTATAAAAAACTTGAAATAGGTTTTAATGGAAATCGAATTGTTGATGTTAATCTTACTAGTGAAGGAAAGGTGAAACTGGTTCCCAATACTAAAATCCAGATGTCATATTCAGTAAGTATGAAAATAATTGTATACAGGA a score=3981 s mm7.chr15_random 441281 114 + 7075849 ctctgaactttttgacAGGTGTCT--------TGATCCATCCTTTT-TGTCATCATAGGGTTCATTGATTTTCAACTTACAAGTCCTTCATGTTGGTGAACCTCATAGTGGGTTTAATTTTAA s bosTau2.chr26 27696311 122 - 35715000 CTATGAATTTTGTAACTGGTATTTCTTGTAAGTAATACTTTATTTTCTGTTATTCTAGA-TTCATTGGTTTTCAATTTTCAACTCCTTCATGATGGTTATCTTCTTGGTAGGCTTAGTTTCCA a score=4524 s mm7.chr15_random 441569 70 + 7075849 tAGTTTTATTGAGAACTTTAAGTAAAAGATTCTGCCAGATACAGTAAAGAAGAAGAAATGGATGATACAG s bosTau2.chr26 27696433 69 - 35715000 TGATTTTAATGAGAACTTTAAG-AAAAGATTATGCCCGGTATAGTAAAGAAGAAGAAATGGATGACATGG a score=4500 s mm7.chr15_random 441710 169 + 7075849 TAATATTTTTATTCTCTTATTAGTTCT-GCATGTCAGATAT-TTGTTGTGTCTCTCATTGTTGCCATGATAGAGGATTTACATACTAGGAGGGGATCATTTCTCA---------TATTTGTCTAAGTTGCTGCATCTCCTGTGAATGGCTA-TTTGGATGAAGTTGTTATACTAAACCAGA s bosTau2.chr26 27703871 152 - 35715000 TGATATTTTCTTTAAATCATTGGTTTTAGTTTATCATATATGTTGTTTTGCCTTTT-----------------------------TAGGAGGGGGTCAATGCTCAGTACAGCCATATTTGTCTATGCTGCTACATCTCCAGTGAATGGTTATTTTGGAGGAAGTCTGTATGCTAGACAAGG a score=7086 s mm7.chr15_random 441879 149 + 7075849 AGGAGAGAGATGGAAACAGCAGATGTTTATTGGGACAGCCCTTATACCAGCTGTGG-GTGTGGCACTGCCTTCCTCAACTATGT-GTAGTCATTTATTATCAT-CCTCTAGAGCCATTCTGTTTGGAGCTATCATGGTTGTTGTTTGCATCT s bosTau2.chr26 27705550 150 - 35715000 AGGAAGGAGATGGATAAAGCAGATGTTCATTGGTGCATTCCTTATCCCCGCTATGGTGTGTGGCACTGCCTTCTTCATCAATTTCATAGCCATTTATTACCATGCTTCAAGAGCCATTCCTTTTGGAACAATGGTGA--GTTGCTCGAATCT a score=4499 s mm7.chr15_random 442028 126 + 7075849 GTGTTCTGTTTGTTTGTATTTTAAATTCTTCCTCTA-AATACTTGGCAGAAAGCTGTCAGGTCAGCCCAGCTTCCCTTGTCCCTTGTCGTGCCAACACAGCATCTCATTCTGTACTGAAAAAAAAGT s bosTau2.chr26 27714365 120 - 35715000 GTTTTTTTGTCATCCTTCCTCTAAATCTTGTTGGTACAATACTTGGCCGAAATCTATCAGGTCAGCCCAACT-------TCCCTTGTCGTGTCAATGCTGTGCCTCGTCCCATACCGGAGAAAAAAT a score=5241 s mm7.chr15_random 442154 73 + 7075849 GGATTATGAAGCCTGCAGCTATTGTTTGCCTGGGATGAATTTTGATTTTTGGCTCAATCTTCATTAAAATGTA s bosTau2.chr26 27717320 73 - 35715000 GGTTCATGGAGCCTGCAGTTATTGTTTGCCTAGGAGGAATTTTACCTTTTGGCTCAATCTTTATTGAAATGTA a score=3380 s mm7.chr15_random 442369 84 + 7075849 GGGCACATTTTCTCTCTGCTGTGTCAACTGAAGCCTATCCTATGCTTACAGGTCTTCCTTTGACTACTATTT-----AAAGAAAAAAAA s bosTau2.chr26 27721893 84 - 35715000 GGACAAGTTTTCTCTCTGCTGCATCCACTGCAATTTAT-----GTTTACATGTATTCCTTTTACTACTATTTTTTCAAAACAAAGTAAG a score=3864 s mm7.chr15_random 442453 67 + 7075849 AGGATGTATATCTCATTTCAAACCTCATTTTACT-----------GTGGCATTTAGCACAGACCAGAGGATAATATGT s bosTau2.chr26 27722097 78 - 35715000 AGGATGTATGGCTTATTTCAAACATCATTTTACTTTGGATATATGGCGGTATTTAGCACAGCCTTGGGGATAATGTGT a score=21950 s mm7.chr15_random 442520 581 + 7075849 GAAGCAATTAATTACATGGGAACACGCTTGTTTGACAGGAAAATCTATACTAATGTGA-------CTAGAGACT--AGAAAACCTGAAACTTCAGATGAGACTGTCTTCCATGAGGGTAGAACTTGCACAGAAAAGAAGAATAAACACAAGAAGAGATCTGGCCTTAGGCCTAGGTACTTTTCAGTTCTCTTTCATGGTT---TAAAGTAACTTCTATTTCTATTGATCCTGCCTTCTTGCTGACTGCTTTCTCCAGTAGTTCACAGCAAACACTTGGATTTTATGCAGTAGGCATTACTACAACACATGGCTAATCTTCCC--AAACTACCTCATTGAAGATGAAATAGACCAGCTCTGTTCAGTAAAAGGGACAGATAGTTTTTTTAAAAAAACATTTGTTCCAATAAAGTAAATATTTCTGAGAAAGGTGAATGCTGAAATTCCACCAGTAGAAACTGTCCTGGCACTTAGCAGTTCTGCTATTTAAAATGATGTTTCATTTCAAGatttatttatttatttatttatttatttatttatttacttattAtatgtaagtacactgtagctgtcttcagacactccagaagag s bosTau2.chr26 27725911 487 - 35715000 GGAGCAATTGGTTACATGGGAACAAGTGCCTTTGTCCGAAAAATCTATACTAATGTGAAAATTGACTAAAGACCCAAGAAAGCCTGGAACTTTGGATCAATTTCTCTTTCACAGGGGTGGAACTTGGACAGTGAAAAAAAAAAAGCGCAAGAAGAT-TTGGGCTTTAACTCTGGGTACTTTGTGGGTCTCTTTCGTGGATGGCTTAAGTAACATCTATTTCCATTGATCCTAGGTTCTTACTGACTGCTTTCTCCAACTGTTCACAGCAAATGCTTGGATTTTATGCAGTAGGCATTACTACAGTACATGGCTAAACTTCCCAAAAACTAGCTCATTAAAGATGAAATAGACCAGCTCTCTTCAGTGAAGAGGACAAATAGTTTATTT---AAAGCATTTGTTCCAATAAAATAAATAG---AGGGAAACTTGGATGCTAAAATTACATGAATAGAAATCTTCCTGGCAC----------------------TAGTGTTTC-------------------------------------------------------------------------------TACAATACTGAAAAA a score=19040 s mm7.chr15_random 443212 759 + 7075849 TGATGTTCCATTTCAAAGATTACTTTTTCCTGTTATATTTACAGCCATTGTTG---TACTATGGGAGATTTTAATATATTGAACCTGGGTTC-TTTTTGACCTGCTTT----GGCCTTTCCCATTTAACCTTtttctttttttagagaaaaatatttctccat----agccctgactgttctagaactcaatatataccaagctgccctcaaatctatagatccacttgtctgtgctttccaagtgctgggattaaaacgatgt-gccacaacacACTGTTAACTGCATCAATTTGtaaaataaataaataaataatttaaaaCTATCCATTTCTCAGTGGACTATATCTGCTGTGGCCTTAATATCAGTTGGATTAACCTCATTTATTTATCTTCAAAATATGATAGTATAGAAGTGTTTTTTATTAAACATTTTGAGATTTAAATATAGTACAGTTTAACTGAATGTCTACCATGATTATCTTTCCTGCCCTTCCCCCAAGTTAATTTTATATGTTTTTAGGGTTTCAA--GAGCTTTTACATAA-AAATGATTAAGAATGAAAGAGGataaatacatacatgcatgcatgcatacatacatacatacatatcacacatacaCAATGTGCTGTAGATTTAGGTTCCTGGATGGATTTGGATGTGCAGGTTGATTGTGGAGGACTTTTTTGGGGGGGATGGTGATCAGTGTAAAAATG------TTTAGGGGGCCTTTTACATCTTGCCTACTGTT-TATGAAG-ATTTGGGTTTCTTCAAA s bosTau2.chr26 27726398 680 - 35715000 TGATGTTCCAG---AAAGATTACTTTTTTCTCTTATTTTTACTGCCATCATCAACCTATTGTGGGACATTTTTATATATTGAACCTGGGTTCTTTTTTGACCTGCTTTCCGCACCCCTGCCCCCCCTGCATCtttttttttttaaagagaaa-atttaaaaatattaaatCCTGCATGT----------AATATAT------CTGCTGTCATCTTAGTTGGACCA---------ACTTCCCATTTATTTATCTTAAAACTATACAGTTACATC------TTAATTCCATC------CAAAGAAGATACAGTTTGAAGATAGAGGTGTACTCTCTACAATGCA----ATTTACTGTA----------CAGTTAGA--AAGCAAATTGTTAAATGGAGAAGATAT-------------TTGTTTTTATTAAACATTTTGAGATTTAGATAAACTACATTTTAACTGAATGTCTAAAGTGATTATCTGCC---CCCTCCCCCCAAGTTAGTCTTACATCTTTTTTGGGTTTGAATGAAGGTTTTACATAAGAAATTATTAAAAACAAGGGGGGGTGGGTA-------------------------ATAAATGTATATAACAT-TAAATAATGTAATGTAGGTGTAGATTCCCAAATGCATTTGGATGTACAGATTGACTACGGAGTACTTTTTT----CTGATGATGATTGGTGTAGAAATGTGTGAATTTGGGTGGCTTTTTACATCTTGCCTACCACTGCATGAAACATTGGGGTTTCTTCAAA a score=9160 s mm7.chr15_random 444380 169 + 7075849 ATGTGTATGTCATACTTCTTTTGGGAGGGGG----------------TCATTTTCTGAAACTCTTACT-GGAGCTAAATTTGCAATTTAGAAAAAAATTTAATTCTTTCAAATCTTTCTAGGATATTTAAGTAACATCTAAAGCATTGTTGCTGTAGAATGTTTAAATAAAATATTCTGATCAAAT s bosTau2.chr26 27727078 184 - 35715000 ATGTGTGTGTCATTCTTCTTTTGGGAGGGGGGATTATTTTCTTTTGTTTTTCTTCTGAGACTCCCAAAAGGAGCCAAATTTGTAATTTAGAAACA--TTTAATTTTGTTAATCCTGTCTGGGGCACTTAAGTAACATCTAAAGCATTACTGCTTTAGAATGTTAAAATAAAATTTCCTGACCAAAT a score=17769 s mm7.chr15_random 500885 1286 + 7075849 TAGAACACAAATTTCTCAAGAAAACCTGCAAGTGTGTTGGGTTCTCTAGGCCACTTGCCATGAGCATGGTCTCACAAGGGAGCCTTGAAATGGACCAAGTAAAACCACCACACACCCCCAGGGACACACTTGGAATGCTCAGGCCCCAAGAACAAATACTTGGCCTTAATACTGCTGGCTGCC-ATAGTAACCAACTGGAAGCTCCCATCTGCCTGAGGAAAGGAGAAGCATTCACGTGCTCA--GGCAAGCACACCTGAGAGATAGGAGGAAGAGCAGGGAGGAGAGGAGCCCAAGCCCACAGCCCTATAAACGCACAGCTCATCTGCAGCA-AACACCCTGCACCCTCACCCTGAACCTCTGGATCACTCTTCTGCATCCAAGACCAGCA----CAATGCCCTCATCAGCCTGTCCCAAACCCCATGGTCAAGGTCAGTGAATGAACTCCCTTCTGCTA-GGAAGCTGACCTTGTCTCTGACCTTGTCACCAGAGCCAAGCATACTCCGGGTCTCTCAGAGACCTATCTGCATTCACACCACACAGGGA-TCTGTA-GCAGCCATCGAGAGAGAGGAGTCACAG-CTTTGACTCTGTTAGCCTTTCCCTTGCTCACTTTCTCCCTCTCTACAGTCTCCCAGAGTCTCT-----GCTGTCCAGATCTTTAACTGGCCACTTCTTCCTCTGTGTCTTCTTTCTGTAATTTC-ATCATGGCATCAG--TCAACTCACCTGCCCTCCTGGTT-------GGGACAGACAACACTTAGACATGACAGGGAGAGCTCCCCTCTCTTGCTGAGTCTTATTT---TGGAAGCTGGGAAGGGAGTAAGCC--CAGCTCAATATTTCTTG--CTAGAG----------------CCTGGGCTCCCCAGAGCTGGTTCGATAC--GCAGTCAAGCATGCACAGCCT--TGTGCCAGCCCTCCTGACCCTCCCT-CCAAGTTGAGCTTGTCTTGCTAACTTCTCCT-------------------CCTCTGTGGA----------GGCTCCTGGAATCC---------------CTCCTCTGATCCTTTTCTGTCCTACCCTGTTCATTCCATACTTCTCGA----------AGCTTATTATATTTTGG----------------TCAATTGAAT-TCCTTGGTCTTCTGTGT----------CTTTCCTTCTAC----GGTTTGATGAGAACTGCTTCCCCTCTCTCTCT--GATTACTTTCTTTTTCTTTAATTTGTGCTTTTCTGAAGCCCCTGTCTTATGTTTGA-GCATCTTGGTATTTTCTACTTATCTGACCTTTTCTACTTCTTCTTCTCCTTCCCTGTGGAAAGGGAGGC-TAGGAGGAAG---CTTGTGGAG-----TCTTTCAGAGTCTGTGATAAAGAACGCACCTTCTACATTTT s bosTau2.scaffold4657 51347 1386 - 63082 TGGCACAGAAATTTCCAGGGAAAATCTGAGACTATTCTAGACCTTCCAGGCCACTTCCCATGGACATAGCCTCACAAGGGAGTCTTGGAATGGACT-GGTATAG-----GGGTACCCCCAGGGATCCAGTTAAAACGGTAAGACTTCAAGATAAGATAGTTGGCCTTATTACACTTGGCTCCCAACAGTAACCAGGTCGAAGCTCATGCCTACCTCtgt---------gtgtttgtgtatatgtttgtaagtgtgtgtgtgtg-tgtgtgtgtgtgtgtgtgtCCAAGGAGCTCAAACTCCCTACCCTATAAAAAAGAAGCTGGTTTGCAGCAGAACTCACTAGATCCTCACTCTG--CCTGTGGATCCCTCCTCTGGGCCT--GATCAGCAGAGCCAATGTCATCACCAGGGTGTGCCAAAGTCAAGGGAGAAGGTCAGTAAGTCTGATCACTTCTTCAGTGAAAGCTGACCCTGACTCTG-TTTATTCATCAGAGACAAACA-GCTCTGACTCCCTCAGTGACC-GCCTGTGTTTAGATCACACCAAGATTCTGCACACAGTGACCGCTGGGGAGATGTCACAGAACTCGACTCCGTTAACCTCCACCCTGATCCATGTCTCTC-CTCTTTAGATGTCTTAACTCTGTTTCTAGTTTTCCATCACTTTA--CAGCTAGACTGTTATCTGGATC-TCTACTTGAAGTTTCTATCAGGCTCTCAGAAACTGCCCCCCTGCCATCCTTGCTCTGCTGAGGGGCAAATG--GCTTGGATATGTTAGATGGGGTCAGTCTGATTGGCAAAGGCCTGACTCCATTGTTGCAGAGAGGGATATAATCCAGAAGGTCAATCTCTCATGCCCTAGAGAGGGCAGACTCTAAGTACCTGGCTATTTAGTTCTGATTCCACATCATCATGTAAACATACCCAACCTGCCTAGTTAGCC--TCTCACTCTCTTTGCCACATTTGGCTTTTTTT--TATTTTCTTCTGTGTGTGTGTGCAACACACTCCCTGTGTAGGGTGGGGTTGGTTCTTAGTGTCTGTGTATGTTGATGTGCTTCTCTGTATTCCTTCCCTAAAAGCCTGGGCATTGATCACATTTGAACATATAAATCATCTTATCACATGTTCACACTCTTTTCCTATCTCCAATTCAGTCTCTCTAATTCTCTGTTTGGCTTTAACACTTTTTTTTTACTATTTGTTTGGTAAGGGTGGGATCTCCTCTGTCTTTAAGATTACTTTT----------ACTCATGCCTTTATGTC-TCTCAGCCTTATTCTTTATGCGTGTTAGTATTTTATATTTATCTGGCATTTT-------TCTGTCTTATTCCCTGGAGAGAGAGAGGCTTAGAAGTGAGTGACTCAAGGATGATCCTCTTTTAGAGACTGTAATACAGAGT-CGCAGTCCATATTTT a score=2785 s mm7.chr15_random 506658 149 + 7075849 CATTGTTAGGACATTCTTTGTCAGAAGTAACATTTTTTTGAGAGTGAGGGTATTTTT--------------------GTTTGTTTGGAGTTTGTAACAAAATTACAGTTTTCT--TTTTATTG----TATTTCCTAAAGTAACAGAAGAGCCAGGGATttg--ttttgagacagggt s bosTau2.scaffold4657 59368 168 - 63082 CAGTCTTAGAAGAATCTTTGTCAGAAATAATATTT--------GCAAGGACATGTTTTATATTACAGAATAATGTTAGCTTATCtgaagctc-taggagaatgaacgctttcttattttcttgctgatatttcttcagctaacagataagacagcattatgattttcaagtcatggt a score=507 s mm7.chr15_random 507183 160 + 7075849 aaaaaaaaaaaaaaaaaCTTTAAAAGGGTAGGAAGTTCAAAATATACAACCGGAAAGGCAAGTGAGGAGATAAGAGTGTGTCTCAGCAAAGGGCAT--------CATGAGGCTGACAGCTCTCACCTACACTAGAAGGTGCCGTGCACACG---CAGTGTGGTAAT---GTCCC s bosTau2.scaffold4657 59560 157 - 63082 AAGACAAAATTTAAAATCCTGAAGAAGGTAGAAATATCC---TCTATAAC---AAAGGTG-GAGGCAAAATAAGGTTAT----TAACAAATGGAATATGTGACATGTAAGACTGAA------TACCTATCCTATAAAGCACAGTACACATGACttaatattattatttaatatt a score=10391 s mm7.chr15_random 507343 633 + 7075849 TAAGAAGACATGTGTCTGTAGTAGCATAGATGCCAAAGAGCTGCAGAGCTCACCAGGTACCACTG-TCTTCCAGAGTGGCCCACCAGCTCAGACCATCCTCCCTGGAGCAGCTCTTCCTCAAACAACATGC-CATCTCTGTTTCTCGGGACAGCGATTCAGTG--AAACGGCCTGAGCAGCTAAGCCACGGGATGAGGTAGG-TGTGGTTTGCAGAACCACGGGATGAGGTGGGCGTGGTTTGCCTCACAAAAATCCCACATATGGACACGGGTGTCTGACTGGCCAGCTGCTAA--------GGTACCTAACAAGGCACAAGATACTGGCTAGCCTTATTTCTGCTCAGTGAACTACAGGCAAGCA-TTGTCCTTTAGTGGGGTCTAGTGACTCCTAGAGTTAAACTCCAACTTCTTCTTGGCCAAGTCCAAGAACTGTGGATTGTGGCTCACTGATGATGTATGTTGCCCATTCA-----TTATCTTAGCCTCGACATGTCAGCCGACTGAAGGACTGTGGGTCCAT------ATTAAACAATGTCTTCTG-CCTTCCCTCCCCTTTCCAGACCACCAGGGTAG----TCCTAGATGCTAGAACTTTCCCACATGACGATGATGCCAGTGG------GCCCGGCTGATGCCTTGATCAACCAAGAAA s bosTau2.chr5 50710875 610 - 76426644 TAAATAAACATTTATCACCCATGGTATAGATGACAGAGAACTAACAAGGCCATCATACAAAACTTCTCTTCCAGAGTGGCCCACCAGGTCAGACCATCCTCTCTGGACAAGCTCT---TCAAACACCATGAGTTTCTCTGTTATTTGTCACAGTAATTAAATGACAAACATCATTACCAGTCAAGCAACAGAATGAGGTAGGATGTGATTTTTAAGA-----------------------------TATTATTGTTGCATTTACTTATACAAATGTTTGACTGGTTAAGTCCTGACTAACTCTTGTAGTTAACAAGACACCAGGTATCACAGAATATTCTTTCTAAGGAACAAGCCACAAATAAATATTTGTACTCCTGCAAATCATAATGACTCCATAGGCTGAATTTCAGTTTCTTCTTGTC---------------TGAAATGTAGCTCACT-------TACTTCACCTGCCCAGACTCTGACCTCAGTTTCAACAAGTCCACTGCGCCCATGATTCAAAGCCACTTCTTGGATTAAACAGTTCTTTATGCCCCTCCCTACTCATTCTGGGCCCCCAAGAGAGGAATTTCTAG-----GGGATCATTCAAAGCAGCTATGATGGGAATGGCCTACTGCCCAAACACTGCCTGGACCTGTCAGGAAA a score=80117 s mm7.chr15_random 508798 1371 + 7075849 TGGGTGTCTG-GTCCAGGTGACCATCTTA-GCTCCCATACAGCTGTATCCTTTGTGCTTTCCCTGTCCCCCATCCTCAAACAGGTCCCAGACAGCAGACCCGAAGAACAGCAGCAGCACTGTGACTGAGTTCATCCTCGTGGGCTTTGAGCAGAGCTCCCCTTCCACACGGGCATTGCTCTTCACCCTCTTCCTGGCTCTCTACAGCCTCGCCATGGCCATGAATGGCCTCATCATCTTCATCACATGGACTGACCCCAGGCTCAACAGCCCCATGTACTTCTTCCTTGGACACCTGTCTTTCCTGGACGTCTGCTTCATCACCACCACCATCCCGCAGATGTTGGTCCATCTGGTGACCAAGAACCACACTGTCTCCTTTGTCTCTTGCATGACCCAGATGTACTTGGTCTTTCTAGTGGGTGTGGCCGAGTGCATCCTCTTGGCTTTCATGGCCTATGATCGTTATGTTGCCATCTGCCACCCACTGAACTATGCCCAGATCATGAGCCAGAAGGTGTGTGTCAGGCTGGTGTGTTCTTCCTGGATCTTTGGGATGGTCAATGGTATCTTTCTTGAGTATATATCATTCAGGAATCCCTTCTGCAAAGACAACCACATAGAGAACTTCTTCTGTGAGGCTCCCATAGTGATCGCTCTCTCCTGCGGGGACCTCAAGTTCACCATGAAGTTGATCTTTGTGGATGCCATTGTGGTGTTGCTCAGTCCCATGGTGCTCATCATCACCTCCTATGCCCGCATCCTGGCCTCCATCCTCCACAGGGCCTCCTCCTCAAGCCATAGGAAGACCTTTTCTACTTGTGCCTCCCACCTGACTGTGGTCATCTTTTTGTACACTTCAGCCATGTTTTCTTACATGAATCCCCGCAGTACACATGGGCCTGACAAAGACAAGTCTTTCTCCCTCCTCTATACCATCATCATGCCCATGTGCAACCCGGTCATCTACAGCTTCCGCAACAAGGAAATGAAGGGGGCCATGGGGCGGGCTCTTGGGAGAGGCAGCCTGGCTTAGGCAGGATCTGCCCAGAAGGAGGGTGTCTGGAGA---AGTTTCCT----CAGTAGGGAGA---AGGTTGCTTTTCTCAGCACCTCGCTTTTCAATTCTGGGGAAGCTCTAAAAAGGAG------------CCTTGCCACTAGACTCAGACCTAGAAGTTCTTCCTGATGTCTCAGGCTCATT--TCTGACTTTATTTCCAGAATTGTTTTTCCCATGAATTTTCTTTAAGGAGACGT-GAGGCTTTCCTGACTAG--TTCCTCTGTGTTC-CGCAAGAG--TCAATGA---------GTATTTAACTC-----TATCTTGTCTGTATAGTTCTTTTACATGCCATCCCCTGGGGGAACTTTTTGCACATACATTTAGGAATAA s bosTau2.chr5 50712953 1392 - 76426644 TGGGTTTCTGTAATCAAGTGAGTACCCTGCATTACTCTACAGCTGTCTCTCTTGTACTTTTCCTGTCCTTTGTCCTCAAGTGGATCCACGCCAGCGGACCTAAGGAATGGCAGCA---CCGTGACTGAGTTTATCCTCGTGGGCTTTGAGCAGAGCTCCCCATCCACTCGGGCATTGCTCTTTGCCCTCTTCCTAGCCCTCTACAGCCTTGCCATGACCATGAATGGCCTCATCATCTTCATCACCTGGACAGACCCCAGGCTCAACAGCCCCATGTACTTCTTCCTTGGCCACCTGTCCTTCCTGGATGTCTGCTTCATCACCACCACCATCCCACAGATGCTGGTCCACCTGACAGTGAAGAACCATGTTGTCTCCTTTGTCTCTTGCATGACCCAGATGTACTTGGTCTTCTGTGTGGGTGTGGCTGAGTGCATCCTCTTGGCTTTCATGGCCTATGACCGTTATGTTGCCATCTGCCACCCACTTAGCTATGCCCAGATCATAAGCCAGCAGGTCTGCGTGAGCCTGGTGAGTATTGCCTGGTCCTTTGGGCTAATCAATGGCATCTTGCTTGAGTATATGTCATTCTGGAATCCCTTCTGCAGAGACAACCACATAGAAAACTTCTTCTGTGAGGCCCCCATAGTGATTGCTCTCTCCTGTGGAGACCCCCAGTTTAGTCTGAGAGTCATCTTTGCCGATGCCATTGTGGTGCTGCTCAGCCCCATGGTGCTCATCGTCATCTCCTATGCCCGCATCCTGGCCTCCATCCTGGGCAGGAACTCCTCCTCTGGTCGAGGCAAGACCTTCTCTACTTGTGCCTCCCATCTGACCGTGGTCATCTTTTTCTACACCTCGGCCATGTTCTCTTACATGAACCCCCGCAGCACACACGGTCCTGACAAAGACAAGCCTTTCTCCCTCCTCTACACCATCATCACCCCCATGTGCAACCCCGTCATCTACAGTTTCCGAAACAAAGAAATGAAGGGGGCCATGGCGAGGGCCCTTGGGAGAAGCAGCCTTTCCCAGGCAGAGTCTGTCTAGTGGGAAGATGCCTGGAGGGGCAGCTTCCTCCTCCAGTCCTGAGAGTTGGATAACTTTCCTGTGC------------------TGAGAGGCTCCAGGAAAGAGCATTCATAGGTTCCTTGGCACCAGCATCAGGCCTGGAAGTTCCTATTAATGTCTAATGCTCATCTATCTGATGTACCTTTAAGCACTG-TGTTCTCTTGGACCTT-TTTCAGGAGACTTGGAGACCTTTCTGAGTAATTTTCTTCTAAGTTCTCACAACAGGATCTATAACACATAACCACACTTAATTCCATTTCATTTTCTTTGCATAGCACTTTTATATGCTCTTCCCAGCCTCAG--TTCTGCCTAGGCATTTAGGAGTAA a score=11483 s mm7.chr15_random 565258 387 + 7075849 TGCTGGTCACAGGACAATGATGTGACAAAAT--GATTGGTGACAGCATAAAAGATGGCAATTAAGCCATCAGAAACCCTGACAAGAAAATTAATTCAAGTTCAAC-TGGGAACTAAGTGGGCAAGAGTTAAG-GACTCCCTGACCTGAAAGTAAAA---------CGATCATATTTGC------------TATCTAT----------AGGAGAACACAAATTTCTCAAGAAAACCTGCGAGTGTGTTGGGTTCTCTAGGCCACTTGCCATGAGCCTGGCCTCACAAGGGAGCCTTGAAATGGACCAAGTAAAACCACCACACACCCCCAGGGACACACTTGGAATGGACAGGCCCCAAGAACAAATACTTGGCCTTAACACAGCTGACTGCC-ATAGTAACCAACTGGAAGCTCCCATCTGCC s bosTau2.scaffold4657 51147 408 - 63082 TGTTAAACGTAGTATAATGATATGAAAAAATTGAATTGGGAGCA-CATGAAC--------CTAAGTCATCAGAAATTCTAACTAGAAAATTAATTCAAAATAAAAATGGAAAATAAGTGGTCAAAAGTTAAAAGGTTCCCAGATTTGAAGCTGAGGACACATGGGTAATGATACTTCCCAGGCCCTTAAATATCAATGCATCTAGCAAATGGCACAGAAATTTCCAGGGAAAATCTGAGACTATTCTAGACCTTCCAGGCCACTTCCCATGGACATAGCCTCACAAGGGAGTCTTGGAATGGACT-GGTATAG-----GGGTACCCCCAGGGATCCAGTTAAAACGGTAAGACTTCAAGATAAGATAGTTGGCCTTATTACACTTGGCTCCCAACAGTAACCAGGTCGAAGCTCATGCCTACC a score=10554 s mm7.chr15_random 565698 855 + 7075849 GAGGAAGAGCAGGGAGGAGAGGAGCCCAGGCCCACAGCCCTATAAATGCACAGCTCATCTGCAGCA-AATACCCTGCACCCTCACCCTGAACCTCTGGATCACTCTTCTGCATCCAAGACCAGCA----CAATGCCCTCATCAGCCTGTCCCAAACCCCACGGTCAAGGTCAGTGAATGAACTCTCTTCTGCTA-GGAAGCTGACCTTGTCTCTGACCTTGTCACCAGAGCCAAGCATACTCCGGGTTTCTCAGAGACCTATCTGCATTCACACCACACAGGGA-TCTGTA-GCAGCCATCGAGAGAGAAGGAGTCACAG-CTTTGACTCTGTTAGCCTTTCCCTTGCTCACTTTCTCCCTCTCTACAGTCTCCCAGAGTCTCT-----GCTGTCCAGATCTTTAACTGGCCACTTCTTCCTCTGTGTCTTCGTTTCCTAATTCTATCCTGGTGCCAG-----------------TCCTGGCTGGGGTAGAAGGCCAATAGTTTGGCTGTGACTGACATATCGAGTCAAATTTCCAGGAGCA------------GGCAGAAAGAGACATCCCC-----GCTCAATCTCTTCT-TCCTAGAGGCTGAGG-----TGGTACCCAATTCCTCAGTTCTGCTCCCACATCACCAGCCAAGCA-GCCCAGCCTCCCTGG-------------CTCCTT-CCACA---GGAGTTTCTCTGTCCCTGTCTGTAGGTGAA------------------------------GGCTTTTGGAGTCTGGGTCTCCTGGTGTGTTTCTCTATATTAACCTTTTCTCTATGTTCAGACTTCCTTTCTTTGGCATTTGTATCATTCATTCATTGTGAATTTTTGTTATGCTTTGATCACATTCTTTCCTCTCTTAAAGCTCCTCTCAGATCCATCTCTATCCATCCAA--CTTTGTGCAGGTTt-----ttttttttt s bosTau2.scaffold4657 51598 919 - 63082 gtgtgtgtgtgtgtgtCCAAGGAGCTCAAACTCCCTACCCTATAAAAAAGAAGCTGGTTTGCAGCAGAACTCACTAGATCCTCACTCTG--CCTGTGGATCCCTCCTCTGGGCCT--GATCAGCAGAGCCAATGTCATCACCAGGGTGTGCCAAAGTCAAGGGAGAAGGTCAGTAAGTCTGATCACTTCTTCAGTGAAAGCTGACCCTGACTCTG-TTTATTCATCAGAGACAAACA-GCTCTGACTCCCTCAGTGACC-GCCTGTGTTTAGATCACACCAAGATTCTGCACACAGTGACCGCT-GGGGAGATGTCACAGAACTCGACTCCGTTAACCTCCACCCTGATCCATGTCTCTC-CTCTTTAGATGTCTTAACTCTGTTTCTAGTTTTCCATCACTTTA--CAGCTAGACTGTTATCTGGATCTCTACTTGAAGTTTCTATCAGGCTCTCAGAAACTGCCCCCCTGCCATCCTTGCTCTGCTGAGGGGCAAATGGCTTGGATATGTTAGATGGGGTCAGTCTGATTGGCAAAGGCCTGACTCCATTGTTGCAGAGAGGGATATAATCCAGAAGGTCAATCTCTCATGCCCTAGAGAGGGCAGACTCTAAGTACCTGGCTATTTAGTTCTGATTCCACATCATCATGTAAACATACCCAACCTGCCTAGTTAGCCTCTCACTCTCTTTGCCACATTTGGCTTTTTTTTATTTTCTTCTGTGTGTGTGTGCAACACACTCCCTGTGTAGGGTGGGGTTGGTTCTTAGTGTCTGTGTATGTTGATGTGCTTCTCTGTATT--CCTTCCCTAAAAG--------------CCTGGGCATTGATCACATTTGAACA-TATAAATCATC-TTATCACATGTTCACACTCTTT-------------TCCTATC---TCCAATTCAGTCTCTCTAATTCTCTGTTTGGCTTTAACACTTTTTTTTT a score=3463 s mm7.chr15_random 569925 73 + 7075849 AAAACCCTCTTAAGAGTTAAACTAGCTCTCTTCACCTTCCCAGAGGACTGAGGATGCCAAGCTATATAGAGGT s bosTau2.chr15 18369666 73 - 53815408 AGAGCCCTTTTAAGAGTCTGATTGGCCCTCTCCACCTTCCCTGAGGCTTGAGGCCACCAGGAAGAGTGGAGGT a score=6146 s mm7.chr15_random 570461 287 + 7075849 AACAGTCTTTCTGACAGTGAAATAT--TTGGGAGGGTTGGAGAAA----GGCAACATCCTCTCCTCTCCAC-------TACAGCAGCAGTTGGGCTACAAGTAGGG------GCTAAGTCTTTGTAGCGTTC--TTTCCATATGAAGAAAAACCACAGGGAGATGAGGGGGAAA-----CTCA--ATTGAAACTAATGTATGCCGTCTAATCTGTGCCTGCCGTGAGTTA-----TATGGGTTCATCTTCATTTTGTAGGAG-AAAAGGCTTGAGATTCAGCTAG-TAACACTTCTCTAGAAT------------------TGACTTTCAGGTGCGCCTG s bosTau2.scaffold4657 52807 339 - 63082 AAAGGCCCTCCTAACAGGGAAGAACCATTGGGATGGATCATAAAGCATGAATGAGATCCTCTCCTCTCTCCAGGTTTCTGCAGGGCCAGTTTGACTACCTCTTGGGACACTGGCCAAGTGTTTACAGTATTCCTTTTACATGTGAAGTGAAATCACAGGGGCAGGGAGAGAAAACAGAGCTCACCACTGATGTTTATTTAT-TTGTTCAGTCTATGCTGGCCACTAATAATACATtattagttaattttcattttgtaggagaaaaaaacttgagaatcaactagccaactccacacaatagtaagtgacagtgcgaaggctaaatttcaggtgtgcctg a score=3964 s mm7.chr15_random 574057 270 + 7075849 CTCCTTCCC-TCCCTGTTCAGCTCCTGGTGTCCTTAGGTCATTT----CTCCTTTTAACCATGAAGGCAAAATTAGAGCCCAGGCCTGTGGATGGGGGAGTAGTCTAAAGTATTTTTGCTACTTTTAGCAGTGGTGATT--------------------AAGAGCCTCAGAGAAA--------------------TCTCATCGTACTGAAG----GGCATCTCTCCCGTAACAGCTGAGAG--------CCAGATAA-ATTACTTCCCTAGACTCTCTGGAGAAGTCTT--------------TCTAAAGAGAAACCTGGTGGTAGGATTAGATGTTCAACC s bosTau2.chr5 50707716 339 - 76426644 CTCCTTCCCATCCCAACTCAGTTCTCTGTGTTCTTGGATCAGTTTATTCTCCTTCTAATTGTGATGGAAATATTGGAGTACAGATCTGGAGAAAATCAACAAG---GAGGCTTCTTGGCTACTTTAGGCATTGAGGGTTTTGTAGGCTTTAAGTTACTGAGTAGCCCAAGGAAAAAAAAAAACTTACCAAGTAGTCCACCTCAAACATGAGACCTAGCATTCCTCAACACAGAGTTGGGAGCCAAAACTCCAGATAATATGAACTGCCTGGACTTCTTTGAGATATCTTGGAGGTAGCTATAATCTCAAAAGGTCACTCGCAGTGGAATTGGGTGCTCAACC a score=3127 s mm7.chr15_random 574935 112 + 7075849 AGTCTATGGAACTTAAAAACCTCAACAACAACAAAGAAAAACCCCACTCTAATATATTCAACTTTTCTTACAATGTTTCATGGATGCGCTTATAGTGTAAAACTTATTTATC s bosTau2.scaffold4657 57449 101 - 63082 AGTTGACTGAACTGTGAA--CTCACCAAGAAAAAAGG---------CTCTTACACACACAACTTTTCCTACAACATTTCAGACATGCACAGACACTATGAAACATATCTATC a score=1022 s mm7.chr15_random 576245 213 + 7075849 tggaACTAAAGGAAAATTCATATCTTCATTTTTTTT-----GTATTTCTGAAATGAACAGAT----------------TTTTAAGTCAGGCATGGATACAAAAAAT------GTTAA----AAGGGTAAGTTCAAAATATACAACCGGAAAAGG------------------CAAGTGAGGAGATAAGAGTGTGTC-TTAGCAAAGGGCAT--------CATGAGGCTGACAGCTCTCACCTACACTAGAAGGTGCCGTGTACATG---CAGTG s bosTau2.scaffold4657 59444 258 - 63082 tgaagctctaggagaatgaacgctttcttattttcttgctgatatttcttcagctaacagataagacagcattatgattttcaagtcatg-----gtgctaaaattcaaTTAGTTAGCACCAAGACAAAATTTAAAATC-----CTGAAGAAGGTAGAAATATCCTCTATAACAAAGGTGGAGGCAAAATAAGGTTATTAACAAATGGAATATGTGACATGTAAGACTGAA------TACCTATCCTATAAAGCACAGTACACATGACttaata a score=15106 s mm7.chr15_random 576458 1245 + 7075849 TGGTAATGTGCTTAAGAAAGACATGCGTCTGTAGTAGCATAGATGCCAAAGAGCTGCAGAGCTCACCAGGTACCACTG-TCTTCCAGAGTGGCCCACCAGCTCAGACCATCCTCCCTGGAGCAGCTCTTCCTCAAACAACATGC-CATCTCTGTTTCTCGGGACAGCGATTCAGTGAC--ACGGCCTGAGCAGCAAAGCCACGGGATGAGGTAGG-CGTGGTTTGTAGAACCACAGGATGAGGTGGGTGTGGTTTGCCTCACAAA-ATCTCACAAGTGGACACGGGTGCCTGACTGACCAACTGCTAAGGC--ACAAGATGCTGGCCAACACAG--TATTGTTTCTGCTCAGTGAACTTCAGTCAAGAACTGACCCTTAGTGAGGCCTTAGTGAGTCATTGAGTTAAATTCCAACTTCTTGGCCAAGTCCAAGAACTCTGTGGATTGTGGCTCACTGATGATGTATGTTACCCAATCA-----TTATCACAGTCTCAAGGTGTCTGCCGAGTGAAGGATTGTGGGTCCAT------ATTAAACTCTGTCCTCTGcccctcctttcccctccctttttttcctcttcccttccctttccttcTTTTTCCAGACCAC----AGGAGTAGCCCTAGATAGCAGAACTCTCCCATGTACAGATGATAGGAACAG------GCCTGGCTGATGCCTTGATCAACCAAGAAATCTCACATAGAGGGAATCTAGTCCTGTAAGAAGTAGACATTAACAGGGGAGGTAGCCTCCACAA----------GACAAGAAGGAATATGAGACCTTGAAAGGTTAGAG-TGCTCAACTCAACTTAGATAGCTGGCTGGTA---ACCAGAAAAGATGGGAAAGTG-GAGAAAGAGGAAG-GGGTGAGAATTAGCAGGAGTGGGATGGTCATGTAGAAGGCAAA--------------CGAGGGTATAGCAAAAAGAG--------AAGAGGAAA--AACAGGAGTGCT--GAAGAACGGAGTAAAGCAGGCATATACACTAACATCTA-AAACACCTGCAGCAGGGAGGTGGG----ATGCATCTTAACTCC-AAACAAGATG-AAAGTACAAGAGATTTCATTTGAACACAGTGATTCCCTAAATGTTACAGTAATGAGAAAAGAGCATACTGATGCTGAATACTAAGATTCTAATGGT-GTAAAATAAACACTATGTGTTCACAGGTACTCAAGTACGCCTACACTCAATGCCCTCTGCAGGCCCAAGTCCAGAAACGCTGGCACCTATGAACCTTGCTCATCCAAACCCCATTCTCAAAGACATGGTTGGATTTTTT s bosTau2.chr5 50710862 1220 - 76426644 TAGGGATATTATTTAAATAAACATTTATCACCCATGGTATAGATGACAGAGAACTAACAAGGCCATCATACAAAACTTCTCTTCCAGAGTGGCCCACCAGGTCAGACCATCCTCTCTGGACAAGCTCT---TCAAACACCATGAGTTTCTCTGTTATTTGTCACAGTAATTAAATGACAAACATCATTACCAGTCAAGCAACAGAATGAGGTAGGATGTGATTTTT--------AAGATATTATTGTTGCATTTACTTATACAAATGTTTGACTGGTTAAGTC----------CTGACTAACTCTTGTAGTTAACAAGACACCAGGTATCACAGAATATTCTTTCTAAGGAACAAGCCACAAATAAATATTTGTACTCCTGCAAATCATAATGACTCCATAGGCTGAATTTCAGTTTCTT--------------CTTGTCTGAAATGTAGCTCACT-------TACTTCACCTGCCCAGACTCTGACCTCAGTTTCAACAAGTCCACTGCGCCCATGATTCAAAGCCACTTCTTGGATTAAACAGTTCTTTATGCCCCTC------------------------------------CCTACTCATTCTGGGCCCCCAAGAGAGGAATTTCTAG-----GGGATCATTCAAAGCAGCTATGATGGGAATGGCCTACTGCCCAAACACTGCCTGGACCTGTCAGGAAA---CACCTACAGGGCTTCCAA----GAAAGAAGT-GGCAGTAATGGCACAGGTATGTTTTAAAATTAAGTTAGGTACCTGAAAGATTTAAAGACATGGACAGCAGAGAGAAGTTCAACTGGAGGTAGCTCAGTGACAGACACCCACCACCAGAGATGAGAAAGGGAGAGAAAGGAGAAGAGAGTGAGAAATGGAAGTAAGTGGAAAACCATGGGAAAGACAAAAAGAGGGGAGAAATTGAGAGTGTGTATAAAAGGGAATGGAATAAGAGAAAATGAAGAAGAGTGACAGGCAGAACTGAATGTTGAGAACAAACACACT---GTCTATAAAAATCTGAAAGTGAAAGATCTGTCCTATATATCCTAATTCCAAAACAGGATGAAAAGTAGGAGATATTTAATATGAACATAATGACTTCCTAAAAATCACAG---TGAGAATAGAGCATGAGAATTCTGGATGCTTGTTCTCTGATGATAGAGAAAAGAACAAGATTTACTCTCTATTAGTAAA--AGGCC--AGCTTGAAGTTGTCTGAACATCCA--TCCA-AAACGATTGAATTTGTG--CCCTGCTCAGAACTTCCCTGTTCTCAGAGGAATAGTTGGATCCTTT a score=77717 s mm7.chr15_random 578065 1334 + 7075849 CTTCCTCAGCTTCTAAAATTGGAATTTAAGCATTGAACATGCAGTGAGCCTGGCATTTGTCATGAC-TATGCCATTACTATACAGATTCTCCAGAGCTTGCT-AAGTTCCAAAACTTTTACTATCGCACCCTGG-----------AAAGCCTCTT------GCTGGGTGTCTG-GTCCAGGTGACCATCTTA-GCTCCCATACAGCTGTGTCCTTTGTGCTTTCCCTGTCCCCCATCCTCAAACAGGTCCCAGACAGCAGACCCGAAGAACAGCAGCACTGTGACTGAGTTCATCCTCGTGGGCTTTGAGCAGAGCTCCCCTTCCACACGGGCATTGCTCTTCACCCTCTTCCTGGCTCTCTACAGCCTCGCCATGGCCATGAATGGCCTCATCATCTTCATCACATGGACTGACCCCAGGCTCAACAGCCCCATGTACTTCTTCCTTGGACACCTGTCTTTCCTGGACGTCTGCTTCATCACCACCACCATCCCGCAGATGTTGGTCCATCTGGTGACCAAGAACCACACTGTCTCCTTTGTCTCTTGCATGACCCAGATGTACTTGGTCTTTCTAGTGGGTGTGGCCGAGTGCATCCTCTTGGCTTTCATGGCCTATGATCGTTATGTTGCCATCTGCCACCCACTGAACTATGCCCAGATCATGAGCCAGAAGGTGTGTGTCAGGCTGGTGTGTTCTTCCTGGATCTTTGGGATGGTCAATGGTATCTTTCTTGAGTATATATCATTCAGGAATCCCTTCTGCAAAGACAACCACATAGAGAACTTCTTCTGTGAGGCTCCCATAGTGATCGCTCTCTCCTGCGGGGACCTCAAGTTCACCATGAAGTTGATCTTTGTGGATGCCATTGTGGTGTTGCTCAGTCCCATGGTGCTCATCATCACCTCCTATGCCCGCATCCTGGCCTCCATCCTCCACAGGGCCTCCTCCTCAAGCCATAGGGAAGACCTTTTCCACATGTGCCTCCCACCTGACCGTGGTTGTCTTTTTCTAC-CCTCAGCCATGTTTTCTTACATGAATCCCCGCAGTACACATGGGCCTGACAAAGACAAGCCTTTCTCTCTCCTCTACACCATTATCACCCCCATGTGCAACCCGGTCATCTACAGCTTCCGCAACAAGGAAATGAAGGGGGCTATGGGGCGGGCTCTTGGGATAGGTAGCCTGGCTCAGGCAGAGTCTGTCTAGAAGGAAGATCTATAAGGAAAAAGTTCCCTTCACTGCACAGT--GAAGAGTTAACT--CCTTCCTGGCTTCACCATTTCCACCAGAGTCCAGGAATGAGTATTCATTGCTGCCTTAGCATTGGACTCGAGGT--GAAATTTCT-TTTGTGTCt s bosTau2.chr5 50712795 1343 - 76426644 CTGCCTTAATTTTTGATATTATGATTCCATGGAGGCACCTATGGTGACCCTGGCATTTTCACTGCCCTATACCATTGCCA-----ATTACATAATGTTTACTTAAGTTACAAAACATTTACCACCACTCATTTATCTTTTATATTACATCCACTAATATTAGGTGGGTTTCTGTAATCAAGTGAGTACCCTGCATTACTCTACAGCTGTCTCTCTTGTACTTTTCCTGTCCTTTGTCCTCAAGTGGATCCACGCCAGCGGACCTAAGGAATGGCAGCACCGTGACTGAGTTTATCCTCGTGGGCTTTGAGCAGAGCTCCCCATCCACTCGGGCATTGCTCTTTGCCCTCTTCCTAGCCCTCTACAGCCTTGCCATGACCATGAATGGCCTCATCATCTTCATCACCTGGACAGACCCCAGGCTCAACAGCCCCATGTACTTCTTCCTTGGCCACCTGTCCTTCCTGGATGTCTGCTTCATCACCACCACCATCCCACAGATGCTGGTCCACCTGACAGTGAAGAACCATGTTGTCTCCTTTGTCTCTTGCATGACCCAGATGTACTTGGTCTTCTGTGTGGGTGTGGCTGAGTGCATCCTCTTGGCTTTCATGGCCTATGACCGTTATGTTGCCATCTGCCACCCACTTAGCTATGCCCAGATCATAAGCCAGCAGGTCTGCGTGAGCCTGGTGAGTATTGCCTGGTCCTTTGGGCTAATCAATGGCATCTTGCTTGAGTATATGTCATTCTGGAATCCCTTCTGCAGAGACAACCACATAGAAAACTTCTTCTGTGAGGCCCCCATAGTGATTGCTCTCTCCTGTGGAGACCCCCAGTTTAGTCTGAGAGTCATCTTTGCCGATGCCATTGTGGTGCTGCTCAGCCCCATGGTGCTCATCGTCATCTCCTATGCCCGCATCCTGGCCTCCATCCTGGGCAGGAACTCCTCCTCTGGTCG-AGGCAAGACCTTCTCTACTTGTGCCTCCCATCTGACCGTGGTCATCTTTTTCTACACCTCGGCCATGTTCTCTTACATGAACCCCCGCAGCACACACGGTCCTGACAAAGACAAGCCTTTCTCCCTCCTCTACACCATCATCACCCCCATGTGCAACCCCGTCATCTACAGTTTCCGAAACAAAGAAATGAAGGGGGCCATGGCGAGGGCCCTTGGGAGAAGCAGCCTTTCCCAGGCAGAGTCTGTCTAGTGGGAAGATGCCTGGAGGGGCAGCTTCCTCCTC----CAGTCCTGAGAGTTGGATAACTTTCCTG----------TGCTGAGAGGCTCCAGGAAAGAGCATTCATAGGTTCCTTGGCACCAGCATCAGGCCTGGAAGTTCCTATTAATGTCT a score=16118 s mm7.chr15_random 638757 523 + 7075849 CTCTTCCCACCCCACCCC------TAGAAATGGCCACTTCCTGGTCTGCTTCGTGTGACC-CCACCCCATCTGACCACAAA--GCTTTGTACAACTGGCCACCAAGCTTTGATGATCCGATTACTCAAAACTTAATGTGTAGCTTGTACTCACTGcattcattcagcagacatttattgagcacctactatgtgccaagcTTTTGGAATGTGTCCACAAACAAAATTTTTGTATGTAGTAG--TGTTTTAGGATATGTCTCTCTGTTTGTGATCGGTGTGTGTGTGTGTGCCCAGCTTTGCTCTTAAAGCTAGAAGCTCACCAAGAGCAAAGATGAGTTCTCCCCCATCCTCCAGCCTGGAACCCTGGGAGCACTGTGCAAAGAAAACCTTAAAGAGGGTGTTGAGGACAA-----AGCAAGCTTGTGTGTTAGGGGCTTCATGCAAA---CACCTCTACAGTGTGCAGTCGATGGTGGGCAGATGGGAATGCAAAGAGCCAAGCTCATCCCTTCCACCAGGGTCTGGTGCACCAAACCTTG s bosTau2.scaffold91514 6 517 + 527 CTCTCCCCACCCCACCCCCACCCTTAGGAATGGCTGCCATC-GGTCTGCTTCATCTGGTCTCCACCCCATCTTACCAAAAAAAGCTTTGCATAATTAACCATCAAGCTTTGATGGCTCCATTACTCAGCACCTAATGTGCATCTGGGATTTATttcattcacacaacaaatatttactgagcacctactgtgtgccaagtccttggaatatagccatgaaccaaaTGTTTGTACCCATTGGTATGCTGCAGGGTTTGCATTTTTGTTCATGATC------TGGGTATATGTACAGCTTTTCCCTTGGAATTGGAAGCTCACAACAAATAAGAGTGAGTTCT-CCTCACCCTCTGGTCCTGCACCCTGAGAGCATGCTG----AAGGACCCAGAAGAGGTATGGGAGGGAGAGGAATAGTGAGCGTGTGTG---AATGTACCATGTACAATGCGATGCTTTAGTG-ATGGAAGACAGTGGATGGACAGGACTACGA----TCAAGCTTTTCCATTGCA-----ATCAAATACACCAGGCTATG a score=15611 s mm7.chr15_random 641552 1893 + 7075849 CACTGTTAGAGCCATGATGTTAGAATGGTGTGGTTCAACCGACCTCTTGTACCCCCTTCCCCCACTCTCTAACTCCTTTCTTGCC--------TTCCCACTCCAGTTTTCAGCATTTCCCTGGAAGCAAACCGACTAAATGCCCTGCTGAGTGTTCAAAATTTCGCAGTGAATAATAGACCCTGAAGTCCAATGAAATGGTGTCACATGTGAGTGTCTTTGTTTCTCATTCTAAATTGCTTCTTGGGGCTTGAAACCTGCTTAGCAAGAGCTAGGCATTAGTGATGGGCTCATGATTCTGTGGCCTGTTTTGAT-GGGAGTTCCCTTGGCAGGAAAGGCCA----TCTGTTAGGTGTTGCTTGACTCA--GCAAATGTTCCAGGGACATCTGGCCAGCCAG-TAGCTGGGGACACTG--------TTGTGGGCAGTGCCTAGAATGGT---------TTCAAAGAGCTTCCAACACTTTGGCCCAGCTTTCTGAAAACATGAAGTGGCAGCAGGTGCCACACCCATCT---GGGTGACCAGATGACCGACACAGCCTGTGACTCCACATCTGTCCT---------CTCAATCTCTGAATGCGGAAGCCAGAGCTTCACCCTGAAGTTTCTTCCTTTCCTACCCTTTC-------ACCAAGCCC---ACCCCTTGCTCCTCCCTAAGATCTTTCTGCTTGCC--------------------------------------TGGGCTCCCAGGGAC----TTCCACGCCGCTGTTCTATCCA------------------CTGTGCCTTCCCAAG-TGGTTTTTGTAGGAT-GCTCTATTGGATGTAGAAATGACTGATGAACAACTAGGGCACA-----------TTGATGAACCAAAACTAAAGAGGATGCAGG----TAGCTAAAACTG---------GTGCCTTTT-----------------AGGGCCTCACCAAGCACCTCTCAGCTGATGCCATCCCCATATATGCCTGAGAGCACACACACACACCACTAGCCCCTCCCATTCAACCTGTTCCAAT---CACTAGCTCTGCC-ATCTTCCT-------GCCTTCCACTGT-CTACATTCAGGGATATTCAC-------------CCCAGCCA-----------------------------------------GCATTCTCTATCCTCTGGAACTTTCTCAGAGACTAGGAAGTGGGG----------------------AGGTAGTCCTCATGTTTGTGGGTACAAAGGATTAGCACCttccatatt------------------------------------------------------caccacatgacaactaggagactttgagaaaaattattcagcctgtctgagctctccatttcctcttctgtaaaaacaagagaaatagtgcatccctcaAACAGCCTAGGACGTATGAACTAGAGATTGTTTCTTGCTTATATTGATCGAGTAAACAGTAGGTAGCCCATGATGAGGCACACTCAGTAGGCGGAGCCCATGATGAGCACACCAGTAGGTAGCCCATGAATGAGCACACAGTAGGTAACCCACGATGTAGCACCCAGTAGATAGCCCATGCAAAGGAAAGCACTCTTGTCAAAGTAAGGTGTATGTT-CCCTACAGAGCCCTCGCTCCTTGTAAAGGGAGAAGTGTTCTCAAGCAATCCAACTTCAGAGCCACAATC------TAACATG-TTATCTCCCCTGATCTGGTACAGGAAGAAGTGCCCAAACCATA--TTATCAATTATCCTGCCCCAAA-TGTTG-ACTGGAAATGAGCCAAGCCTCTAGCCCCAAACCATCTCAAAGAA--TTGTGTCAAGCGGTAGCTGTATCTCATATGTGCTGGGCAATAA-ATAGGCACCGTTCACAAGTAGGTAGTGAGGTCTTAAACGTCCACAGCAAAACCAGAGAGCCAG---AGAGTCAACTGACTGAAACTTTAGCTGCCACACATACCAATGATGTTCCATGGAGAACAGTCTA----AAGCTCTGACCTCCCACACAGAGGGCTT-CAGGACAGGT-GTAGCAAGGTAAACGGTGAAAACCTACTTTAAAACAATCCTCAGACAGCTGAGGAAATAGACTATGGAATGGATTGGAAGTGCTGTTCTGGTTTTGCTGTTGATTTCCatgtatatgtata s bosTau2.chr5 56663599 1986 - 76426644 CGTTGCCAGAGCCAAGACCACACAGTAGTC--ATTCTGCCAACCCT------CCCCCCTCCCCACTCCC-----CTTCTCTCACCAAGAGCTTTTTTCACTCCAA----------------GAAAACCTACAGATACAATGTCTT--TAGGTCTTCAAAATT-AGCAGCCATTAGTAATACCTGA-GTTAAATGAAATGGTGTCACATTTGAATTTTTTTATATCCTGGTTTAAATTGCTTCTTT-------CAAATTGCTTAGCAAAGAGCAGCCATTAGTAATTAGCTTATGTTTATGCGTGTCATTTTTATAGGGAGTTACACTAGTAGAAAAGGTAAAGTGTGTGTGAGTTGCACTCTGACTCACAGGGCTTCTCCTTGGGATACCCAGCCAGCTGGCTGGCTGGAAGCACCACAACTCCATTGTGGGCAGTGCCCAGAGTGGCGGATGAGGGCATAAAGAGCCTCAGAAGAGCTGGCCCAGGTCCCCAAACACATAAAGTGACATTAGGAGCCACACCCTCCTCTGGGATGGCCAGATTGCTGACATGGTCCATGACCACATGTCCATCCTATTACAAGTCCCCATTCCTGAATGTTCTACATGGA----CATACT--ATTCTCTTCTTCTCCTTCCTCCTCTTTTCTTACCAACCCCCTCACCTCTTGC-----CCTAAGCTGCTT-TGCCTGCCCTTTGCCCCTACAGCACACCAGCTACCAGCTACAGTGTTGGGCTGCCAGCTACAGTGTTTCTCTTCTCTTTTCTTCCCATCCATTTAAAACAAACCCCTGTTCTTTTATGGGATCATTTTTCTAGTCTTACTCTATTGGAAT--GGAGTGTTTCATGTATG--TAGAACACAGTATAATCTTATCAAGGTACTTACAATATACCAGATGCAAGCAAATAGCTACAACTGCTCTTCTCCATCCCTTTCCTTCAATTCTCAGCCACAGGGTCCTGCAGATCCCCTCTCC-------TCAGCCTCTCAT-TGCCCTGTGTCACACACGTGC-CCATTGACCCTCCTGGTTCCAACCATTCCAACACCCCCTGACTCTGCCCATTTTTCTTAGACTGACTCTCCTCAATTCTATATCCACAGATTGCTGCTGTTGTttaattgctaagtcattttcaattcttttgtgatgccacgaactgtaatttgtcaggcctcctctgttcattggattttgc----agacaagaaaactggagtaagttgccgtttccttcttcaggggatcttcctgactcaggaatcaaa------------tccaagtctccTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTcttaatagctgggagg-tttggggcaagttatttaacctctccaagc-ctcagtttcctcatctgtaaaa-tagggataatgatacctacttcatatggt---ggatgtgagaattagagatcatttatggcatatagtgtt---------------------------------------------------------------------ggta--------------acagagtaggtggcc---------------agtaaaaag--------------------------aaaatagaacctatattGCCCTACAGAGATCTTTCTAATTGTAAAGGGGAAAACAtactcaagtgatctgatttagcatcaccagtaataggacaacttgattgtgctttctggggtgatacagtaagagttat--aaagcattgtttatgatgtatgctgccccaaaatgtttcagttaaacccaatcaAGCCTTCAGACcagcactatctgaaagacactggtgtgatggtggaaatgttctgtttctgtgctat-caataatgtagctgctagtcatgcgtggcatgtga---------------ctgaaaaactagattttttatttaattttaactaatttaaatttaaatagccacacgtgtctattggctaccatgttgaacagcccagCTCAAGAGTTTATTTTCAGTGTATAGAAAATACAAGAGAGATAGCCATAAGTTGAATCAAGAAAATCAATTTTTAAA-AATCATAGGACAGTTAGGAAATTTTAATATG-AATGGATAGGAAATTATTTTTTGGAATTATCATTCTTCTTCTTGCATGTGAAAA a score=12732 s mm7.chr15_random 643777 597 + 7075849 GAGGACTGAAGAGACGAATACTTAGCCCTATACTAGGTGCTGCCATGTTGGGAAAAGCAA-----TGCTCAGAAGTCAGAAGGAACAGC-AGCGAGGGACAAGATCCCGCTCTGCTTTGACAGAGATAAGGTCCTG-----------GACCAAAGCCAACGCCACCGATTGGGGTTGATTACCCAGTCTTGCTTGGGTACCGTCCTCCC-----CACACACTGAAGACACAACTGCATTGGCACCCAATTCCCAGCTCCCCTCTATGCGTGGCACCTTCCTGCCCTCCCCGAAGCT-----GAAGCCTCAGAGTGC-GCATGCCCAACC--TCAGGCACTTTGAAGATGCAGCATGCTGAGCGCCTCAGGCACCTGCTGAGCGCCCCAGGCACCTGCTGGCACGCCTTACAAAGAGGAGGGTGCGGGCCACTCCACCATTAAAGCACATTCTAGAGAGGC-TTGGACAAGGCTAACCGCCCAAGCCCATAAAGTCCAA-TTGCCTCAAC--CACCTTCTTAGCCAAACCCCTATGAAGCTGC-CATAAATAGGACCCCGGTGCCTGGACTAGCACATTGGAGCTGCCACCAGGACTACGGAGCTCCCATCCAGAACGCTTCAGCC--CATCTTC s bosTau2.chr5 56665810 600 - 76426644 GAAAACATAAAACACAAATATTTAATAATCTGCTGACTGCTGTCATGGCAGGGAAAGTCAGAACTTTTTCAGCAGCCAACTGGACTCGCTGGAGATTGGGAAAATCCAGCTTTA-TGTAACAG---CAGGGCCTTGCCCACTACTGGGATGGAAACTTCCAGAAGTTATTTG--CTAATACCCCAGTCTCTCCTAGGCCCCCCACTCACACCTGCACACACACAGGTCAC--CTGCTTCTGC---CACTTCTGGTttcccttctcctccctccactctcctgccctgcccttctctttccAGTCTCCTCAGATGACTGCATGCCCAGCTGGCAAGGCACTTTGAAGATGAAACATGCCGAGTCCCTTAGAG-------------CCCAGGGAC----TGGCATCCTTTACACAGAGGAGGGTGAGGGCCACT-----ATTAAAGCACATTCTAGAGAGGCGTTGACCTCAGCTAGCCACACAAGCCCATAAAGCACAAATTGCCACAACTGCATCTGCATAGCCAAGCCCCTTCCGACCTGAGCATATATAGGACCTCGGCTCTTTGAGGAGGACATTGGAGTTTCCAC-AAGACTCCAGCTCACCTCTCCTGTACTCTGCAACCTACACCTCC a score=27264 s mm7.chr15_random 644379 484 + 7075849 CACCATGACCTGTGGAT---------------CAGGATTCTGTGGCCGCGCCTTCAGCTGCGCCTCAGCCTGCGGACCCAGGCCCGGCCGCTGCTGCATCTCTGCAGCTCCCTACAGGGGCATCTCCTGCTACCGCGGACTCTCAGGGGGCTTCGGCAGCCAGAGTGTCTGTGGGGCCTTCCGCTCTGGCTCCTGTGGACGCAGCTTCGGGTACCGCTCTGGAGGCATCTGCGGGCCCAGCCCACCCTGCATCACCACCGTTTCTGTCAATGAGAGCCTGCTCACGCCCCTGAACCTGGAGATCGACCCCAATGCTCAGTGTGTGAAGCATGAGGAGAAGGAGCAGATCAAGTGTCTCAACAGCAAGTTCGCAGCCTTCATCGACAAGGTCGGTGTCCTAGACCA----------GCAGAGCATGCATG-TCACAGCCAAGGCCGGGCACTGAGTGAAACAGGAGGCCGAAA---GCCCACTCATACTGAGCCTCTAGTCTCAAGAGAGAGGA s bosTau2.chr5 56637225 504 - 76426644 CAACATGACCTGTGGCTTCAGCACTGTGGGCTCTGGATTCGGCAGTCGCGCCTTCAGCTGCGTCTCCGCCTGCGGACCCCGGCCCGGCCGCTGCTGCATCACGGCCGCCCCCTACCGAGGCATCTCCTGCTACCGCGGCCTCACCGGGGGCTTCGGTAGCCGCAGCGTCTGCGGGGGCTTCCGTGCCGGCTACTGCAGCCGCAGCTTCGGGTACCGCTCCGGTGGCGTGGGCGGCCTCAGCCCTCCCTGCATCACCACCGTGTCAGTCAATGAGAGCCTCCTCACACCCCTCAACCTGGAGATTGACCCCAATGCGCAGTGCGTGAAGCAAGAGGAGAAGGAGCAGATCAAGTGTCTCAACAACAGGTTCGCTGCCTTCATTGACAAGGTGAGTCTCCTTGATCATGCCTTTCCTGAATCCCACCCATGCTCAGGACCCCAGCTGGGCAC----TGAAGAAGGAGTCAGAGACATGCCCACAGA-----AGCCCTCAGGCCAAAAGGAGAGGA a score=1863 s mm7.chr15_random 644890 67 + 7075849 GAGGCAGTGGCCAGGCTGTCCTGGGTACAAACTGACTACAGG---GAGTCC----CAGGGGCTGCAGCATGGAG s bosTau2.chr5 19768563 73 + 76426644 GATGAAATGGACACACT-TCCAGGGCACAAACAGACCAGAGAGATGAGTCTAGAGCAGGGGCTCCTGAATAGAG a score=495 s mm7.chr15_random 644957 78 + 7075849 CTGGGGCAACCCAAGGAGGGAGGCTGCACTTGGGCTGACAGGAAGGGTGCAGACTACTGGAGGGATAGACAGAGGCCT s bosTau2.chr5 19687099 58 + 76426644 CAGGGGCT--------------------CCTGGTATGATAGCACTGTTATAATGTACAAGAGAGATAAGAACAGGCTT a score=-1198 s mm7.chr15_random 645155 173 + 7075849 CTGAGCCCAGCA---TAGGACAATGAAGTGTCCACCTGGACTCCTGAGTGTAGGCACTGACCATGTCCCTTGTGCCCTCTCCCA-GTGGGAAAGTCAGGCAGGACCA--------------AGATAAGGGCTCCT-TCCCAGAGCCCC-----TCTACTTCC-----------------------------------------------------TCTCCACCATCAGCCCAGATCTGCCCTG------------------AACCCCT s bosTau2.chr5 19768917 260 + 76426644 CTAGACTCAGCAGGTCAGGATAACTCA--GTTCACCTGAG-----AAGTGAATGATCTTTCCAAACACCTTGCTCTCACCCTAATATAGAAAATACAAACATGATCACTATCTTGAAATCCAGAAATTGCCTTGTCTCCCACTGCCCCGTCTGTCTAATTTCTGCTGAACTCCTGGTTTTGGAGTTTACTGTAAAGAGATCAGCACACTCCCCAATCCCCTCCATCC-TCCAAATAGGCTTTGGGGCAGTAGGAGCCATCTGACCCCT a score=17468 s mm7.chr15_random 645328 288 + 7075849 TCTGTCTCC-CATGGCAGGTGCGCTTCCTGGAGCAGCAGAACAAGCTGCTGGAGACCAAGTGGCAGTTCTACCAGAACCGCAAGTGCTGTGAGAGCAACATGGAGCCTCTGTTCGAGGGCTACATCGAGGCGCTGAGGCGGGAAGCTGAGTGTGTGGAGGCCGACAGCGGGAGGCTGGCTGCTGAGCTCAACCATGCACAGGAGTCCATGGAGGGCTACAAGAAGAGGTGAGGGCTCTGGGTGAGGCGCTGGCTCAGGATTTTGCTTAGCTGGAAGCTCAAGGCACAGG s bosTau2.chr5 56639193 284 - 76426644 TCTGCCTCTATGCGGCAGGTGCGCTTCCTGGAGCAGCAGAACAAACTACTGGAGACCAAGCTGCAGTTCTATCAGAACCGCCAGTGCTGCGAGAGCAACCTCGAGCCCCTGTTCGAGGGCTACATCGAGACACTGAGGCGGGAGGCCGAGTGCGTGGAGGCTGACAGCGGAAGGCTGTCCTCAGAGCTCAACCACGTGCAGGAGGTGCTGGAGGGCTACAAGAAGAAGTGAGTGT----GGGAAGGCGCCGGCTCCGGGAAGGGCTT-GAAGGTGGCTCCCAGCACAGG a score=2874 s mm7.chr15_random 645618 632 + 7075849 GTAAGACTG-----TTTCCAGGAAAGTG-TATGA----GGAGGGCA-------------TTGCCAGATCCT-------GCCTGCCACCTATGAGATTTCTGT--GTAGGCA---GACACCTGAAGGGG---CCCTGTCTGTGATTAGGCTCTGTCTAGCTCAGCTGGA-----GACAATCTAGCCGC-TTGGCCGGCTCTCTTCTAGGGGAAGACACTCTAGGGCAATCTGCCTGCTCC----ACTTGTCCTTTGTCCTATGAACTGTGGCAACCAAGT-TGATAC-AGCCTAAGT---TATTAGGAGAGGCAGGACCCAG--CCCCAGAAAGTCCACAGACCTAGGTGCCC----------AGTCCTTCCGTCTC-TAGGTCTTTCAGCAGCTGGGATGAGAGGGG----TAAGTGATGGAAAGCTAGGTCTACA-TGGCCAAGAATATATGATGTCACTTCCCACAAGACACTGAGGCTGAGCCTCCATTCCTCTCCTGAAGTGACCTTCAAGCAG----------AATGCTCACAAGTTTCCCATGAG-----CCCTACA-CCCTAAACT-AAAACAGACAGAGATCCCTAGATA-ACTCTAGATCCAACCAGAAAGTCCTTCACGGGGCTGGAAGGATCAGCGCTAAG------GATCCTCCCTGCTCTC------TCTGCTGTGGAAAT------GGGGGTCAGAGACTAAACCCTCACTGCCTGACCTCTCCT s bosTau2.chr5 19769465 713 + 76426644 GTGAGACTGAAGCATTTCAAAGAAGGGGATGTGACCATGCAGGGCAAGTTGGTGGTATGCAGCAGGATCCTCCCATCAGGCAGTCGTTGCTCAGATGCCTATGAGTAGGGCCGTGATTCCCTAGGAGGTCTCTCTACCCTCCTTCAGGCTT-------CTCTTCTGGAAGCCTGATCACCCAGCAACAGTGCCCTGTGCTCTGTTGGGAGGAGGC-----------TTCTGCATTCTCCCAGGCATGGCCCTTCAGGCTCCCACCTGTAGCACTTGGATGTGATATGAATCTCAGTGTCTCTCAGGGCTGCCAGGTCCTAGGTCTCTGGGTTTTCCACTGTCTAGGTTGCTCTAATGCTGATGGCCTCTGAGATTCATAGGTCCTCCCCCAGCTGAGCTAGGTTGGACACCCAGGTGGGGAGCGGCTGGGGCTGCAGTGCCCCAGAGGGGCTGCTGTCCAGTCCTG------GCTGGTGCTGAGTCCTTATTTTCCTCCAGAGGTGACCTCAGAGCAGTTTGGGCAGCAGGGCTATGAGGTTCCAGAAGAGTCACCCCCTGGATCCCTCAACTCCAAGTAGAGAGAGAATCACAGACACACCCCAAGTCCAACCAGAGAGGACCCAGCAGGGCTGCCAGGGATCTTGCTATGTGGGGAGGTCCTCCCTAGTGTCGTCCCATTCACTGGTAAAATGTGGAGGGGGTTCTGGGG--AGACCTGCCCTGCCATGATTCCCCT a score=5044 s mm7.chr15_random 646250 75 + 7075849 CTCTTCAGATACGAGGAGGAAGTTTCTCTGAGAGCCACGGCCGAGAATGAGTTTGTGGCTCTGAAGAAGGTGAGT s bosTau2.chr5 56640250 75 - 76426644 CCCCTCAGGTATGAAGAAGAAGTTGCTCTTCGGGCCACAGCGGAGAATGAGTTTGTGGCTCTAAAGAAGGTAAGT a score=1396 s mm7.chr15_random 646325 162 + 7075849 AG--------CAGGTGGCAGAGGAATGTGGATCTCCCCCATCCCCCAGGGGCACACTGTGCTCGGAGAGAAACACTGT----TAATATCAGGGATGCTGTGAACTTATCCATGGAGGATTGGGAATTCCCTGAGAAGCACCATG--ATGAATGTCATGT-CAGGCCTGTGACAAAGG s bosTau2.chr5 19770263 165 + 76426644 AACATGGGATCAGGAAGCAGAGCCATGAAGG--------ATCTCAGAATGACAGGCTCTCATTGTGGAGAACAATGGTCTCATCCTCTTTGGGGAGCAGTGACTTTGCCAATTCAGGATGGGAAATTCCCATAG----ACCAGGTCATGAAAGGCATATCCAAGGCTTTGGCAAGGG a score=-6533 s mm7.chr15_random 646487 71 + 7075849 GCAAAT---------------------------------------------------TGCCTGGAAAGTCTGGT-----------------------GGCCCTGAGGCAGTGTG-------------------------------TGGAGTGCCAC---------------------------CAAGCATGAGAGTC---------------------------------------------------------------------------TCCAC-------------------------------A s bosTau2.chr5 56669302 309 - 76426644 TCCCATGGAGGCATTGTAAGCTTCAGTCTCTCTCTTGAGGGATGGTGTCCTGTCTCATGTCTCAGGAGTCTGGTTAAGAGGAGGAGCACAGTCCCAGGGTCTAGGGGGAGGATGGAGCAGAGCCAACAGTGGCCAGGTGGAGTTTTGGAGGACTACAGGGAAACAGGGAAGGGTCAAGGTGGTTGAGCAAGGGAGCCAGTCTGGCAAGCTTAGGGTAAGAAGGAGACATGGGAGGTAAGAGATCTCAGGTAGGTGGGGTGAAAGGCTAGTGGTCCACCTCCAAGGCACAAGGCATTTGTTCTTAGAAGG a score=1838 s mm7.chr15_random 646558 104 + 7075849 GAAAAGAGCTGCCAAGTGCATGCTGGGAAGGGAAGCA--GAGACGATTTGCACATACAATCACTGGGA-----------TCCATCTCCCTGTGCTGTGTGGGATG-GATGAAAACGGG s bosTau2.chr5 19770867 118 + 76426644 GGAGGAGGTTGTGAGATGCCTGCAGGGAAGGGCAGCATGGAGATGGGACAGGAAAAGGAACACAGGGAATCCTTTCCTCCTCACCTCCTTGTAATGGGTGAGAAGAGAGGAATTCGGG a score=7643 s mm7.chr15_random 646662 125 + 7075849 CTCACACCTCCCT----CTTTCCCAGGATGTGGACTGTGCCTACCTGCGCAAGTCAGATCTGGAGGCCAACGCAGAGGCACTGACCCAGGAGACCGACTTCCTGAGGAGAATGTATGACGAGGTGAGGG s bosTau2.chr5 56640414 129 - 76426644 CTCACAGCCCCTTGAACCCCACACAGGATGTGGACTGCGCCTACATCCGCAAGTCAGACCTGGAGGCCAACTCGGAGGCCCTGATCCAGGAGATCGATTTCCTGCGGCGGTTGTATGAGGAGGTGAGAG a score=-499 s mm7.chr15_random 646787 105 + 7075849 CAGCAGCCAGG---TGGAAGTCTAAGGAGTAGTCTG----------TAGACAGT-----------------CATTCCATGA--CTGT------GAAGTCCTGTGTGGACCAGGGCAGGTCTGAGAGGTTGGCAGAGAT----------GTGTG s bosTau2.chr5 19771154 153 + 76426644 CAGAATCCAGGATCTGGAAGAGAGGGTGTTGGTTTGGGTTCGGAGTTGGACAGGAGTTTGAGCAGGAGCTGCAGTCCATGAGGCTGTCAGAGGGGGACCTTGGGGAAGCCCAGGGAGATCAGGAGGGCTGAGAAGGCTTCTACACACTGTGGT a score=51632 s mm7.chr15_random 646892 1413 + 7075849 GGGTTAGGCTGAGCCTTCAAGAAGTTTTTGACTGCTGTCTCCCTCCT---------CCTGCAGGAGACCCGCATCCTCCATTCCCACATCTCAGACACCTCCATCGTCGTCAAGATGGACAACAGCCGGGACCTGAACATGGACTGTGTCGTGGCTGAGATCAAGGCTCAGTATGATGACATTGCCAGCCGCAGCCGTGCTGAGGCTGAGTCCTGGTACCGCACCAAGGTGAGAGG-CCAGGACATCTGTC-CTTAGATGAGACAGTGGGAAGGACTCCTGG---ATCTA-TTGGAAAGGGCTTCTTG--------CATACCAAGAATC------------------ACCAGAAGATTGCACACAGCTCT-AGGCTGAGGAGGCAG-----------------------CCCAGCCTGACCACTGTGCATCTTGCA---CATCCAT--TGTGCTCACTGGGTTGA-TGTCACATCCTGGTCCTCATGGGCATCTCTGCTTTCCCAACCCCTAGTGTGAGGAGATAAAGGCCACAGTGATCCGGCATGGAGAGACTCTGCGCCGCACCAGAGAGGAGATCAATGAGCTGAACAGAATGATCCAGAGGCTGACTGCTGAGATCGAGAATGCCAAGTGCCAGGTATGTAAGGTTCAGCTGCTCTGGGACCAGAGAGGCTGGATGTCTACTCAGTGCCACACAGCCAGCATGTGT-CCTGCTTGGAGCTTACCATTTAGTCTCCCACCTATTTGCACAGCTGGGTTTCCTGATCATGCTCACTCAGGCTGACCCATGTGAACAAGGCAAGAGG-CTGCTTCTAGAATGTTCCTGACTGTTGGGAAAGACTGGATAGCATGCTGGTGACAGACAGTGAGACCCAGGGACCCTTGGCTATCTCCACTTCTTTTGTGTTCCCAGAACACCAAGCTGGAGGCTGCTGTGACCCAATCTGAGCAGCAGGGAGAGGCTGCCCTTGCTGATGCCCGCTGCAAGCTGGCTGAGTTGGAGGGTGCCCTGCAGAAGGCTAAGCAGGACATGGCCTGCCTGCTCAAGGAGTACCAGGAGGTGATGAACTCCAAGCTGGGGCTGGACGTGGAGATCATCACCTACAGGCGCCTGCTGGAGGGCGAGGAGCAGAGGTGA--GTCCTTCCCCCCACTCAACTATCTCAAAAACCTCTCTTGCTTA-GCCTGCCTGCTCCCACCTTTT--GCATGTCAATTTTAGCCCCCCAAAGCAACAG----AAGTTAGAGAC---AATTTTTGGAGCTCAGTGCTCTTGAACTGGCCTTAAGTGGACT---TAACACACA-------------AGCCATTGTCGCTACAGGG---------CCAGAGCGCCCACCTCATAGGACCCTGCGAAAATTAGAACC--AGTGTCCTACCT-CTGGGCCAGAACTCCCTTGGGTCCTT--ACCCTTCGCTTTTATA------------------------TGGTAGGCACCTTGCCTAGGGTTAGAGCTGCTGGCCAATGTCTGCCCCTGGCCTT-TGTG---CCCCAGAGGATAc s bosTau2.chr5 56641055 1485 - 76426644 GGGTGAGGAAAAGC--TCAGATAATTTGCTTATACTTCCTCTTTCCTGACTCCCGATCCACAGGAGATCCGTGTTCTCCAAGCCAACATCTCGGACACCTCGGTCATCGTCAAGATGGACAACAGCCGGGGCCTGAACATGGACAATATTGTCGCTGAGATCAAGGCCCAGTATGATGACATCGCCAGCCGCAGCCGGGCTGAGGCTGAGAGCTGGTACCGCAGCAAGGTGGGTGGTCCAGGACACCTGCCTCCTAGACACAGCAGTGGTAGGGACTTGAGGTATATATAATTAGAAAAACCTTTTTTTTTTTTCCCCCCCCAGGGATTCTGATCCCTAGAGATGATAACAGAAGG--GCAGACAGTTCTCAGGTTATAGTGGCAGGAcagagttgcagtgtatggttacacaggctgagcactgtacaacCTGCAAATCATCCATGTTGTCCTGAGTGGGTGGAATGTCATAT--------------GCCTTTCTGCTTCCCT-----CCAGTGTGAGGAGATCAAGGCCACGGTGATCCGGCATGGGGAGACCCTGCGCCGCACCAAGGAGGAGATCAACGAGCTCAACCGCCTGATCCAGAGGCTGACAGCTGAGGTTGAGAATGCCAAGTGCCAAGTAAGGAGTGTTT-------------------------GAGGCCCACCCAGGGTCTCAACGGCAGTGTGTGTGCCCAACTGGATCTCACCATTCACTCTCCAGCCCATCTGGATGACTTGAGTCCTAGGTTATGGCCACTCAGGGAGCCCTAGGTGATAAAAGGGAGAGGTCTGTTTCTGGGGTGATCTCATCTGGGTGGAGAGACTGGACA-CATCCAGGAAATGGACACAGAGACCCAGAGGCCATAACCCACCTTATCCTCTCCTGGGCCCTTAGAACTCCAAGCTGGAGGCTGCAGTGACCCAGGCTGAGCAGCAGGGCGAGGTGGCCCTCAACGATGCCCGCTGCAAGCTGGCCGGGCTGGAGGAGGCCCTGCAGAAGGCCAAGCAGGACATGGCCTGCCTGCTCAAGGAGTACCAGGAGGTGATGAACTCCAAGCTGGGCCTGGACATCGAGATCGCCACCTACAGGCGCCTGCTGGAGGGCGAGGAGCAGAGGTGAGGGTCAT--------CTCGGTTGCCGCATGAACTCCACTTGCATAGGTCTGCCCACTTCTGATTTTTCCTCATCCTAGTCTCAGTCCT---AAGAACTGGTCCCAAGCTAGACTCTGAGGTCTTTGAAACCC-GTA-TCTCGAA--GGACTAGAACATGGTCAGTAGCATACAGAGAGGAAATGAGGGCTGGTGCCACTGCAATGTCCAGAGTCCCAGAGAGGCC-------AGGGCCTTCCTAGATTTAGAACCGAGGTGCCCTACCTCCCAGTTCAGAACATCTTCAAATTATTCCATCCTCAGCTCTTGCAAGATCCACTCCCTGCCAGGTTTCTTGGCAGTCATCCTGCCCTAGGGTGGAGATGCTGGCCAAACTCTGATCCTAGCCTCATGTGACTCCCCAAAGGAAAC a score=26342 s mm7.chr15_random 648719 1253 + 7075849 GGCAAATTAGAACGGAAGCAAGTCTGAA----GTCTGCCCAGTGCTGTGCCCTGTGTGGTGTGCCACAGCCACCACAAAAGACACCTTTTTCTACGTGACACAAAG--ATAGACGTGAGCAGGAATT------------------CGGCGCCTGAGGGAAAAACCCGATAACCTGTCTGTTCTGA--TGCCTTCTCTCTTC--TCTCTGCCTTTCTTCCACACAGGCTGTGTGAAGGCGTGGGAGCTGTGAATGTCTGTAAGTATAATGAACCCTGAAAGGGAA----CCAGATTCAGACATCAGCAAAGATTTCCCTGGTGC-ACTGTGCAGACA---CTGAGCAAGCATCACTACTAACTC---CAGTCTAGAGGGCTAGACTGCTCATGCA----GAGAGACTGCGGTTAGT-----------ACC---CAGGATGTCtagggtcagaaagatgtcacccc---aagggacctcaga-gtcccctaatataatgtctgccttgtagaagtgaggaaactgagtccacagag--------------gggttaaagaacAGAAGTACATCCATAACTCGGGCCTCCTGGCTCCCAAGAGGAGGCTCCTCTACACAGCTTGCAAACTAAAACTGAGACTTTATTGTAGCATTCCTCAGAGGGCTGGAGCAAACGAATGGACCAAGGGAAGGTGGC----TGGGGTGGCTTCAAG-------ACTGACCCTGCCTTTGTTCTCACAGGTGTCAGCAGCTCCCGTGGTGGAGTTGTGTGCGGGGACCTCTGTGTGTCTGGCTCACGGCCTGTGACAGGCAGTGTCTGCAGTGCCCCATGCAGCGGGAATGTGGCAGTAAGCACTGGCCTGTGTGCGC---------------------CCTGTGGAAGCGGCCCTTGTCACCCGGGGAGGTGTTAGGAGA---CAAGAGGGAGCCAG--------------------GAAGTGGCCTGGACTACAAGGCTAAGCATGGTAGCTTCAAGGTCT-----GCTG---CCCTTGTGTTCTGAGAATACAT----TCCCCATCCCCAGCAGCTGCCACTCCATTCAGCT-----------ACCTG-------------CTGGCAAGGGG---CTTGCTGCTGATAGATCAGCCTCCTGCCTCAGCTGCAGCCCTGGGAATACCCAGTGC---------TGTTTCCTGTGCCTCTGGCCTCTAGGCCCT------GTTGTGCAATAAACTGTG---CTGACTCTCAGAGTTGTGTAAGGTGTTGTGCTTTCTTGTGGTGGGTTCATAATGTCACCTAGGGGACA--TTGGCTTGGTGATAGGGCCTGATGACTGGAGCCACTGGGGCCTGTCTTTATGGTAGGTATCTGCAGGCTCGGCTCCCAAACAGAATTGCCTTCCCATTCTTACCAAGCAGAGCT s bosTau2.chr5 56642624 1404 - 76426644 ggcaagtgaggctgaaattcagtatatactctgtttgctaaatagtgtgccctg---gcattgctgcaactgccagaacat-cactttataaaagttaacacaagggcataaatataggccagaaatagcccATTTGACCCATCCTGGCACCCAGGGG--AAACTTGAAGATCT---TATTCTAACCTGTTTTCTCTTTTCCTTTTTTACCTTTTCCCCACTCAGGCTGTGTGAAGGCGTTGGAGCTGTGAATGTCTGTAAGTATTCTGAGCCATGAAAAGGAAAATTCTAGATTGGG----CAATAAGAGTGTCCTGGCTATGAGTGTATAGAGATACCAGGAGGAGTGTTTCAAATAATTCCCTCAGTAAATGGGAGTAGGTTAGTCATACAGTAGGAGAGACTGAGATTAGCTAACAGGAAGAACCTCACAGCATGAATGGGATTGGAaaaagatcactgcaggaagggacctcagatgtcacacagtacaaccctcagcttgtat-agtgaggacactaagagagcaaggaagggacttgcccaaggtcacaaaggagatccagggccagaagccagggctcctgatttgcac---gctgtttccatccacACCTTCAGAATACCAGCTGAACCT---TTGTGTCCTTCCTGGGAGGGCT-GAACAGATAAGAGAGGCCAGCAAAGGTGGCCAGATGCGGTGGCCACTAGCAGGCCTCCTGACACCGCGCTCGTCCCCGCAGGTGTCAGCAGCTCCCGCGGCGGGGTCGTCTGCGGAGACCTCTGCGTGTCGGGCTCCCGGCCGGTGACGGGCAGCGTCTGCAGCGCCCCCTGCAGCGGGAACCTGGCGGTGAGCACCGGCCTGTGCGCGCCCTGCGGCCAGCTCAACACCACCTGCGGAGGGGGTTCCTGCAGCCTGGGGAGGTGCTAGGCGGCCCCCGGGGAGAGCCAGAGAGGCCCTTCGGCCTGCCAGAAGTGTCACCGCCCCCACTGCT--GCCTGAGAACATCAGCGCCTCGGTAGCTGGCCCTCTCGTGTTCTGAGAATACACCACGCCCTCCTTTCCATCAGCCTCTGCTCTGCTCTGCTCCTCTAGTCGCACCTGAAGGGGATGCAGCCTGGGGAGGGACTCCTCCCTTCCGCTGTCTTGGCCTCTGGCCTC-------GCCCAGGAAGAA--GAGTGCACCTTCCCATGTCCCCTAACTCTCTGGCCTCTTGTTCCCCCTCCATTTCTCCAATAAACCGAGGCACCCGCTTTCTGTGCTGT----GATGTCTGGCTTTCTGGGAGTGAGTCCCATGCACCGACTGGTGAGCACCCCAGCCCAGGGAGAAGGCCTGAGGACTGGAGTGCTTCTGGCCTGCCCTCAGCCTGTGCTCCTGCAGGGCCTGTCCCCGAATGCTGCCGGCCTCCC--CCTGGCCAGGCAGTGCT a score=2433 s mm7.chr15_random 650670 121 + 7075849 TAGCCCTCTTCCATCCACACCCTACTTCCTTCTCCCACATATATGCTCCTTGCACCCTAACACCACACA---CACCCCAG----------------------------------GGCCACTTTGTGTTGCTCTGGACCCCATT---CCTCATTGCCATTGC s bosTau2.chr5 56644186 160 - 76426644 TAGCCCCCTTCCCACC-CACCGTGCTTTCTGGGCACACCTTCACTCTGCTGTCCCACCTCCACCACACAATGCACCACGGCAGCAACCGTCACAAATGCCAACAGACCTCAGGGGGCCACCCTGTGTCAGCCTGGACCCCACCCCACCTCATCCCCACTGC a score=5561 s mm7.chr15_random 650828 715 + 7075849 CTAAGATGGTCACTCCGTTCCTCTTGAATTGACCTCACTG---------------------GTCCCTGGATACTCCAGCATAGAAGACCCAGAAAAGCTCTGACCCTAGGCTGGAGGAAACAGACTTGTCAGTGTCCTCCATCCCCAGTCATCAA--------CCACTGCTACTCTCCCTG----------------CTTCTCC-----------------CCTTCCTCAGCCCCTGGC--TCCTTCCCCACCCACC-CACACACTCTTGAAAAACACCCCGCCCCTTCACTCTTTAGGCCTTAGGTCCTCTGGGACCCAGACCAA---GCTCCCTGTCTCTCTCCCTCCTCCACTCCTTGGCTCTTAAGTTTCACATCTCCTGACTTACAGGCTCTCATTACTCCAGC-AGGCATCAA-----TCATTGGCTCATAGCCCTCACCCTGAATCCACACTTGAGCAT---------TCAGGGCTCTTCTACCTTCACACCCTGAGCCTGGACACC--ACAGCAGTCTCCACCTTAGCTTCCACTTGAGGTCCTGACTGATGAAGCCTGAGGCCAGGCTCACTGGACCTCAGCAGCAGGTCCCAT-GCTGACCCCTGATCCCGTCCCACAGCCTTGACCCTTGAACCTTGCCTCTCCTGGCGTCTTCCTGACCCTCTTCCCACCTTCCTCCTCTCTACTTTGCAAAAAGCAGCACCCTTTGAAGCCACAGTCCTGGCCAGAACAGAAGCCAGCATCCCTGCTTGCCT------AGGATGCCCTCTGATTCAGCCACCAGGATTGTCCTC s bosTau2.chr5 56644533 758 - 76426644 CTAAGATGGCTCCCCTGCCCCCCGTG---TGGCCTGACCGTGCATGTCCTCTGTTCAGGAAGTGTCTGGGAGGTCTTAGGAGGAAGACCTTGAGGAGCCCCAGCCCCACTCTGGAAGCACCAGGCCTGT-AGTAACCCCTCTTCTGTGTCGCCCATTTCCCTCCCACTGGCCCTCTCCTTGTCTGCCTTTGCCTCGCCTTATCCCAGAGCCTGGTGCTGGTCCTTCCTCAGGCCCTGACCTTTCTACCCAGCTCACCACACTATCTCTGGAGG---ACCCAGAACCTTCCCTCACTCCCTCCTGGCTCCTC----ACCCAAGCCCCTTTGCTCCCCGTCACCCTCACTCC----CTTCCCCTCTCTTGAACTCTGAGTCTCTGGCCTTTCACGTCCTTGCTCTGCAGGCTAGGCTCTCAGCTCTTCCGTGGCTCACTTCCCTCACCC--AGGCAAACCTCAAGCATGAAAATGCCCCAGAGTCCTTC--CCTCAGCACTCGGAGCACGCTCCCTGGACAATAACCTCCATCCTTGCCTTCTGTTACCACCACCATTAAC--ATCCT---CCCGGGTTCAA-GTCCTCCAGCTCGAGTTCCCATGGCTCTCCGCTGCTCTGACCTCAC-TCCTCGGCTTCAGACCC---ACTCGCCCCAATTTCTCCAAGACCTCT--CCACTTGCCTGTCCT--------------GGAG-ACTCTTCCAACCCACAGACCTTTC---AGCTGAACTCACTATTCCTCATTCCCTCCACTGAGGTCTCCTCCTGCCTCACCTGTCAAGGTCATCATC a score=25983 s mm7.chr15_random 654734 1006 + 7075849 AGTGCTGAGAC--AGAACACCTCAGTTAGA-ATACCGACCACCCCACAAGAC----------------TCTGCCTGGAGTTTGGCTTTGTTGTCCCAAAAGCCTGATTTCTCCAGATCAGATAGGAGGT------------ATCTTTGCCTATTGAAAA-CACCCAGGTGAACGTTGGAGTCCTGAGA----CTCTGGC-TGAAGCACTTGGCATAGG-------CAGCACTTTGGAGAGACTGAGGGCGCGAGTTTGATTTGCTGCAATTAGTTTATTGGGAACGCAAAGAGAGACAAAGCCCAAGGAAC----AGGCAGCTGAGCCCCTCG-TTTGGGGGAGCTGCTGCCAGGCAGACCCGGAAGAAGATGCTCT----------GGGTCACGTGGTTTCTAGCGGAGTGTCAGGAAAGCAGGCAACCATGTGGATCCATGTCTCCTTGCC-CAGGCAAAAGCGTGCT---AAGGACCCGGGTAAAGTCAGACAAAGAGGATCCTGGGGCAG----CGGATCCTCCAAGATCC----------------TAAGACCAATGAATCCAGCAAAAAGGCAGAAAGGGAAAGAAAGCAAGAACTCTAGGAACAA-------GTTGCTAGGGAAAGCTACAGATTGAAATAAAGGCGCCGAGGCCACTGTCCCGCTGTG------------------------------------------------------CTGTCCCTTCGGGC---AGGGTAGCCCGTG---------------------------------CCAGTGGCTTGCAGCATTGTGACC--------------TCCTAGCACTTCTTACAGCCTCCGCTGCAGGCGCCTGCCCCGGCGCAGGGGGCGCAGGCATTGGGGGTGCCCACCACCACGTTTCCGCTGCAGGGGGCGCTGCACACTCTTGTGTTGACAGCAGGGGCAGTACCAGAGACGCAGAGATCGCCACAGACGACGCCACCGCGGGAGCTGCTCACACCTGAA-AGCCCGGAGAACAGG-GGAAACCTTGTCAGGCACGGCCATTGCCAAGAGTCTCCGCAGCAAGCTCAAGTGTTCCCGCCCCAAAGGC---GCGCACCACCCCGCAGGA-AAGGGGGAGGCTGGAATTACTTACACACATTCACGGAGCCAACGCCCTCACACAACCTGTGGGAGAGGAAAGGGAGA s bosTau2.chr5 56651403 1188 - 76426644 agtgttgaagttgagaatccttgGTCTAGAGAAACCCATGACCACACAAGGCAGGGAGGGATTCCCCATCTCCATGG-GTCTTCTCTCGTTTTCTCAAGGCTCCGGTAGCTCAAGGCCAGATGGGCAGCTTCTACCACATCATTTTCACCTAATGAAAAATAACTGAGTGCATGA-GAGGTCCTGAGGACATCACTGGCAGGGAGCAGCTATCTCAGGAGGGCCCTGGCATTTATGAGACTCTGAGGCACCAGGTCTGATTAGCCACAATTAGTTTATTGGAAACAAAGAGGGAAACAAAGACAAAAGAGCTTGCAGGCAGTTGATTCACTGGCTTTGTAGAAGCCTCCGC-GGGCATCCTTGAAAGGTGATGGTCTCCCCTCCCACAGGGCATATGGCCCTCAA-AGAGTTACAGGAAAACCACCATCAGTGT---TCCCCATGTCCATGCCACAGGTACCAGCACACTCGCAGATTCCCCAGGATGTGCAGATCGGGAGATTCCGGGGCCTGTTTCCTGTTCCTCCAAGATTAGGTGAAGGGGATCAGGCAGGACCAATGAATCCAGCAAAACC-CAGAAGGCAGAAGAAGGCATGAATCCTCAGGACAGCAAAACGACTACTAGGAAAGGCTACAGAAAGAGGTCAGGGTGC----GCCCCAGCCTCCCCGGGGCTCGGGTGCCTGGCGGATGGCACGCAAAGGAAGCAGAGAGGGAGCAGGGAAGGCAGACCCTGCAGGCTAgcgggcggcccgggggcgagggccgggggTGCAACGGAAGGGGCGTTCCGGTGGC--GCGACGTCCTGGCTGGGCCGGAAGGCGACCTTAGCACTTCTTACAGCCCAGGATGCTGCCGCCCACCCTAGAGCAGGGGCCGCAGGCGTCGGAGGTGCCCACCACCACGTTGCCGCTGCAGGGGGCGCTGCAGACGCTGGTGGTGACAGCAGGGGCAGCACCGGAGGCGCAGAGATCGCCACAGACGACGCCACCTCGGGAGCTGCTGACGCCTGAACGGGGTGGAGAACAGGCAGAGACGCGGTCAGACACTGCCCCAGCCAGGAGGCT-TGGAGC-GGCGAAAGTG-CCCCTCCCTAAAGGCATTGTG-ACCACCCGGCTGGAGAATGGGGAGGGGCGGGCTACTTACAGACATTCACAGACCCGACGCCCTCGCACAGCCTGCGGGGAAAGGAAAAGAGA a score=74396 s mm7.chr15_random 657320 3262 + 7075849 TAAAGGACTTACACAGATTTCCTATCCACGTGCGGGACCATGAAGTGAGGAAGCGAAGATGAACAGGTTACCCAAGGTGTGGGGCTCAATGCTGAGGACCCAAGAAGGGTTGGAAAAGTGAAA---AGCTACAGGACCCACCTCTGCTCCTCGCCCTCCAGCAGGCGCCTGGTAGGTGGTGATCTCAACGTCCAGCCCCAGCTTGGAGTTCATCACCTCCTGGTACTCCTTGAGCAGGCAGGCCATGTCCTGCTTGGCCTTCTGCAGGGCACCCTCCAGCTCAGCCAGCTTGCAGCGGGCATCAGCAAGGGCAGCCTCTCCCTGCTGCTCAGATTGGGTCACGGCAGCCTCCAGCTTGGTGTTCTGGGAACACAAAAGAAATTGAGATAGCCAAGGGTCCCTGGGTCTCATGGTCTGTCACCAGCTTGCTATCCAATCTTTCCCAACAGTCGGGAACATTCTAGAAGCAACCTCTTGCCTTGTTCACTTGGGTCAGCCTGAGTGAGCATAATCAGGAAACCCAGCTGTACAAATGG-TAGGAGACTAAATGGTAAGCTCCAAGCAGG-ACACATGCTGGCTGTGTGGCACTGAGTAGACATCCAGCCTCTCTGGTCCCAGAGCAGCTGAACCTTACATACCTGGCACTTGGCATTCTCGATCTCAGCAGTCAGCCTCTGGATCATTCTGTTCAGCTCATTGATCTCCTCTCTGGTGCGGCGCAGAGTCTCTCCATGCCGGATCACTGTGGCCTTTATCTCCTCACACTAGGGGTTGGGGAAGCAGAGATGTCCATGAGGCCCAGGATGTGACAT-CGACCCAGTGA--GCACAATGGATGTGCAAGATGCACAG----------------TGGTCAGGCTGGGCTGCCTCCTCAGCCT-AGAGCTGTGTGCAATCTTCTTGTGATTC-------------TTGGTGTGCAA--GAAGCCCTTTCCA-ATAGATTCCAGAGTCCTTCCCACTGTCTCATCTA-AGGACAGATGTCCTG-ACCTCTCACCTTGGTGCGGTACCAGGACTCAGCCTCAGCACGGCTGCGGCTGGCAATGTCATCATACTGAGCCTTGATCTCAGCCACGACACAGTCCATGTTCAGGTCCCGGCTGTTGTCCATCTTGACGACGATGGAGGTGTCTGAGATGTGGGAATGGAGGATGCGGGTCTCCTACAGGAGGAAGG--AGACAGCAGATAAAAACTTCTTGAAGGCTCAGCCTAACCCCACACA------------CTTCTGCCAACCTCCCAGTCCTCCCCTGGTCCACACAAGACTTCACAGTCACGGAATGACTGTCTACAGA--CTACTCGATGTACTTCTA---------------------------------------CCTGGCTGCTGCC-------------TTTACCTCGTCATACATTCTCCTCAGGAAGTCGGTCTCCTGGGTCAGTGCCTCTGCGTTGGCCTCCAGGTCTGACTTGCGCAGGTAGGCACAGTCCACATCCTGGGAAAGAGGGAGGT----------------------GTGAGCCTCATCGTGTCCTAAACTCTTCTCTCTCTTCATCTGTCCCA--GAAGCACAGCAGAGAAAGACCCCTGTGTGCAAGTCATCTCTGTCCC------------CACTTCCCAGCATGCTCTTGACAGTTCC----------------ACAGGTTTGGAGACTCT----------------CTGGCTCTCAGCCTCCAAGACATCTTCCCTCTTCTTGCTCTTTGGTTC---TGTTCTGTTCTAAAAAGCTTCCCAG--TTGTCCCCCAGATCTTCCAA-TTGATC-------------CAGCAGTGCTTCAAGAGGTCAACTGGACACTCCTAGCAATCCTC--TCAACCCTTACACACTGT-CTTGAGCCCTAACATTCTGATCAGACTAGTAGAATGGATGTAAACCACACCA-CTTTCA---------ATGAAC-------AGAATGAAGCC-CTGTGGCTCC-TGGAATCCCAACCATACACCCCATGATGAGGGAAAGGCACATCAAGGCTAATACATCCAAGGTCCTGCATCAGAGCAGAAGGATCCAAAAGACATTCCAAACGTATTCATGTCTCCATGGGTTTGGACTACTGACTCTCTAGATGCCA----ACCTTCCAAATGGCTGTTGCCCTCACAACAGCCCTTTGTCATAGCCCTGGGTCTGACATTCATTGGGTCATCTCTCTGAGATTTTTTCCTATTTTGATGTGTGAAGATAAAAATTC---ATGAAGGGTGA------------CCACAAGTACAGTGTGTCCCTCAA-----TTGTGTTGTTCCACCTCCC-ACCGTCTGCTACTTGCCTTCTTCAGAGCCACAAACTCATTCTCAGCTGTAGCTCTCAGAGAAACTTCCTCCTCGTACCT-------AGGACAGAAATAGGGGACATGATATGGGTGGTT-----GAAATCCACACCCCATG----CAGGGAA--------CTCAGGGAAAGAGCCCTC---------AGAGCTCTTG--GTCCTGATAGGTCTT-TCTGGAGGAACCTGGGCTAT-------------------CTGGGAGTGGGTGAAAGCTAGAAGAGA--------------------------ACCAGTGCTGTTCCGAAGACAACCCAGGAAGGAGAGGATGATTTGATACCAACCTCATCTGGGAGGGAACATCATGGGGTTGGGTACTGCGGCTCCAGCCTCCCCCCATTTA--TGTCAGTCCCAGCCCAGCTGCTGAACAGACCCATCAACAGACCCAGA---TTTCAGGGCT-GAGTACCCAAGGCAGTGAGACAGACAGCTTGGCTCATGACCCTCCTACTTTCCTGAGCAGAATCTGTTCAGGGATTACAGTGCAGAAGATCAAAGTG-----AGAAGGAGCTGGAGTGGGGGCTGTGTCTA----------------TCCTCCCCAGAGAAGGCAGAGC-----TGTTAG----TCGCACTCTGCAGAGGGAACACTGAGGCAG---AAATTGACGCTCC--------CCCATCCTCTCCAAGGAACATCTGTGCAGATATTTCACAGACAGCAGGATCCTAC--AATGATGTCAGCCTGGC-TACACTTCCACAACCTGGGCTTTAATATACGGCA----------------------------CATTTTATA---CCAGCACCACAGCAGGCCATTCTCACCTCTTCTTGTAGCCCTCCATGGACTCCTGCGCATGGTTGAGCTCGGCTGCCAGCCTCCCGCTGTCGGCCTCCACACACTCAGCCTCCCGCCTCAGCGCCTCGATGTAGCCCTCGAACAGAGGCTCCATGTTGCTCTCACAGCACTTGCGGTTCTGGTAGAACTGCCACTTGGTCTCCAGCAGCTTGTTCTGCTGCTCCAGGAAGCGCACCTGCCAT---GGGAGACAGAAGGGGTT------------------CAGGGCAGATCTGGGCTGATGGTGGAGA-----------------------------------------------------GGAAGTAGA-----GGGACTCTGGGA-AGGAGCCCTTATCT--------------TGGTCCTGCCTGACTTTCCCAC-TGGGAGAGGGCACAAGGGACATGGTCAGTGCCTACACTCAGGAGTCCAGGTGGACACTTCATTGTCCTA---TGCTGGGCTCAG s bosTau2.chr5 56654198 3529 - 76426644 TAAAGAAATTACTCAAATTACCTGTCCAGTTGCAGGAT---------GGGGAGCTTTGTCAAGTAGGAAAGTCA-GGTACACTGC---ATGATGAGAACCCAGGCAGAGCTGGGAGAG--AAATTTGGCTACAGTACCCACCTCTGCTCCTCGCCCTCCAGCAGGCGCCTG-TAGGTGGCGATCTCGATGTCCAGGCCCAGCTTGGAGTTCATCACTTCCTGGTACTCCTTGAGCAGGCAGGCCATGTCCTGCTTGGCCTTCTGCAGGGCCTCCTCCAGCCCGGCCAGCTTGCACTTGGCATCATTGAGGGCTGCCTCACCCTGCTGCTCTGCCTGGGTCACTGCAGCCTCCAGCT-GGAGTTCTAAGGGCCCAGGAGAGAACAAG---------------TGGGTT--ATGGTCTCTCCACA--------------------------------------CAGCAGGAATCTCTCCCCTTCATCACCTGA-TCACCCAGAGTGACCGCAGCCTTGGTCTCAAGTCATGCAAATGGACTGGAGCATGAAAGGTGAGATCCAGCTGGGCACACACACTGCCTGTGGGAACCTGGGTGGGCCTC-----------------AAACAGCT--------CCTACCTGGCACTTGGCATTCTCAACCTCAGCCGTCAGCCTCTGGATCGTGCGGTTCAGCTCATTGATCTCCTCCTTGGTGCGACGCAGGGTCTCCCCGTGTCGGATCACCGTAGCCTTGATCTCCTCACACTGGTGG-----GAAGCAGAGAGGCTTGTGAAGCTCAGGACAGGACATTCCACCCATTCAAGGCACCACagatgcccag--tgcacagcctgtgaaaccatatatggcagccctgTCCTTCCACTATAACCTGAGAGCTGTCTGCACTTCTGTCACCATCTCTAGAAATCCAAATTGGCAGACAAAAGAAGCCTTGTTAATGTATACCTCACATCCCTTCC----GTCATGTCTAGAAGGCAGGTGTCCTGGACCACTCACCTTGCTGCGATACCAGCTCTCAGCCTCGGCCCGGCTGCGGCTGGCAATGTCATCATAGTGAGCCTTGATCTCAGCCACAATGTTGTCCATGTTCAGGTCCCGGCTGTTGTCCATCTTGACGATGACCGAGGTGTCTGAGATGTGGGCTTGGAGAACTCGGATCTCCTGCAGATGGTGGGGCAGGAGGGTGGAAGGGTCTTGTTTACACCTTGGCTTCCCCCACCACAGTGTGTAGAAGCCTTCT--CAGCCCTCCTGATCTCCCTGGGCTTCCCCAAGGTCCCCCTCTGACAGCCTCATGGACTGCAGCTCCTGCTCAA---ACTCCTGTCCAACTCCGAACCCAAACCAACACCCTCTCTTCCAGATCCTGGATTCTGCCAGGGCTACAATCACTCACCTCCTCATACAGTCGCCGAAGGAAGTCGATCTCCTGAATCAAGGCCTCCACGTTGGCCTCAAGATCTGATTTGCGGAGGTAGGCACAGTCCACATCCTGGGAAGATGGGGAGTCTTTGAGCAAAGAGGACCCCTGGTGATCATCATCAC--CCCGAATTC--CTCTCTTCTCACCCATTACAAGGAGGTGAGGAGGAAAGGATTCCCTGTGTTC---CTTTTCCTGTCCCATCTCCATGCTGCCCTTCCCTGCAGGCATCTCACAACCTCCTCCCCTTCCAAGAACAAATGTCTTGTGCCTTTGAGATGAACCACCAGCCTTTCACCCCACCTACCTGAGACCTCTCACTTTCCAGCTCTCCTTTTCCCCTTCCCTGTACCAAAAAGCCTGCCAGACTGGCTCCCTTGCTCAACCACCTTGACCTTTCCCTGTTTCCCTATAGTCCTCCAAGACTCCACCTGGCCACTGTTGGCTCTGCTCCATCCTCCCCTAGATCCTGGGACTGTGCCCCTCC-TCTTAACCAGACTCCTGAGACA-CTAGACAGGACACCATCCCTCAGAGAGAGGCATGAGCTACAGAGAGACTGAAGCTACCATGCCTCCACAGAATCCCAGCCACAGACTAC----------------------------------------TTCTGAAACACCACAGAAC-ATCCAGAGGTCAATTCAGCTATA---------CCCCGGCTTTAGGGCA----------AGGTGTTAGTGGATTGTCCAA--GGTTACTGCCCT-------------TGCCAAAGCCTTGGATATGCCTTTCAT--GACCTGGTCTATGGGAATTT--CCCATCCTGAATTGGCAAAGTCACTGCTCCCCAAAGAGGATGAGACCATTGTTCTCCACAATGAGAGCCTGTCATTCTGAGATCCTTCATGGCTCTGCTTCCTGATCCCATGTTACTCACCTTCTTCAGAGCCACAAACTCATTCTCGGCTGTTGCTCTCAGAGAAACTTCCTCCTCGTACCTGGGGAAGAGGGCAGAGAGGGGAATCATGGCAGGGCAGGTCTCCCCAGAACCCCCTCCACATTTTACCAGTGAATGGGACGACACTAGGGAGGACCTCCCCACATAGCAAGATCCCTGGCAGCCCTGCTGGGTCCTCTCTGGTTGGACTTGGGGTGTGTCTGTGATTCTCTCTCTACTTGGAGTTGAGGGATCCAGGGGGTGACTCTTCTGGAACCTCATAGCCCTGCTGCCCAAACTGCTCTGAGGTCACCTCTGGAGGAAAATAAGGACTCAGCACCAGCCAGGACTGGACAGCAGCCCCTCTGGG----GCACTGCAGCCCCAGCCGCTCCCCACCTGGGTGTCCAACCTAGCTCAGCTGGGGGA-GGACCTATGAAT---CTCAGAGGCCATCAGCATTAGAGCAACCTAGACAGTGGAAAACCCAGA--GACCTAGGACCTGGCAGC---CCTGAG-AGACACTG-----AGATT----CATATCACATCCAAGTGCTACAGGTGGGAGCCTGAA---GGGCCATGCCTGGGAGAATGCAGAAGCCTCCTCCCAACAGAGCACAGGGCACTGTTGCTGGGTGATCAGGCTTCCAGAAGAGAAGCCTGAAGGAGGGTAGAGAGAC-CTCCTAGGGAATCACGGCCCTACTCATAGGCATCTGAGCAACGACTGC-CTGATGGGAGGATCCTGCTGCATACCACCAACTTGCCCTGCATGGTCACATCCCCTTCTTTGAAATGCTTCAGTCTCACCCAGTGGGTTGAATCCATGTCCATTTCCTGTGCCCAACATCACCCCCAGCCACACTCACTTCTTCTTGTAGCCCTCCAGCACCTCCTGCAGGCTGTTGAGCTCTGAGGACAGCCTCCCGCTGTCAGCCTCTACGCACTCAGCCTCCCGCCTCAGCGTCTCGATGTAGCCATTGAACAGGGGCTCGAGGTTGCTCTCACAGCACTGGCGGTTCTGGTAGAACTGTAGCTTGGTCTCCAGCAGCTTGTTCTGCTGCTCCAGGAAGCGCACCTGCCATTTGGGGTGGGAGGAGGGGTCAGATGGCTCCTACTGCCCCAAAGCCTATTTGGA-GGATGGAGGGGATTGGGGAGTGTGCTGATCTCTTTACAGTAAACTCCAAAACCAGGAGTTCAGCAGAAATTAGACAGACGGGGCAGTGGGAGACAAGGCAATTTCTGGATTTCAAGATAGTGATCATGTTTGTATTTTCTATATTAGGGTGAGAGCAAGGTGTTTGGAAAGATCATTCACTT-----CTCAGGTGAAC--TGAGTTATCCTGACCTGCTGAGTCTAG a score=1296 s mm7.chr15_random 660894 87 + 7075849 TCCTCTCTCTTGAGACTAGAGGCTCAATATGAGTGGGC---TTTCTGCCTCCTGTTCCCTCAGTGCCTGGCCTTGGCTGTGA-CATGC-TGT s bosTau2.chr5 19788915 84 + 76426644 TCCTCTCCTTTTGGCCTGAGGGCT-----TCTGTGGGCATGTCTCTGACTCCT---TCTTCAGTGCCCAGCTGGGGTCCTGAGCATGGGTGG a score=52444 s mm7.chr15_random 660981 2307 + 7075849 GCTCCGGGAAGGGGCTGGTCCAGGACACCGACCTTGTCGATGAAGGCCGCGAACTTGCTGTTGAGACACTTGATCTGCTCCTTCTCCTCATGCTTCACACACTGAGCATTGGGGTCGATCTCCAGGTTCAGGGGTGTGAGCAGGCTCTCATTGACAGAGACTGTGGTGATGCAGGGTGGGCTGGGCCCGCAGATGCCTCCAGAGCGGTACCCGAAGCTGCGTCCACAGGAGCCAGAGCGGAAGGCCCCACAGACACTCTGGCTGCCGAAGCCCCCTGAGAGTCCTCGGTAGCAGGAGATGCCCCTGTAGGGAGCTGCAGAGATGCAGCAGCGGCCGGGCCTGGGCCCACAGGCTGAGGCGCAGCTGAAGGCACGGCCACCACAGTAGGATCCGCAAGTCATGG---TTATTTAGGGAGAAGGGCAACTCTGAAACTGGAGACGTCCAGGTGGAGGGTAAAGTGGACGTGAATTCAGTGTTTACCTCTTTAGGTTTGTT-GGCCTTTTATATATGTGGGGACCCTGACTGTGACCACGTGGTCTGAAGCAATTAGATGGCTTTATGAGCTTGGCTTGTTTAGTTGCTGTGGCTCCTCCTTAAATGTGCTAAATTGGTGACCATTTG----CTGGTGTTTGTGGTCCTTTGCCCTAAACTGTTCAATTTCCTCCTTCAAAGGGCCAGCTCACCCCCTCCATGCCCTGCTCCTG-TGCCCAACACACA------GAAACGAAGCTGGAGAGACAGTGTAGGTGACTCATGCT-ACAAGGAAAATGAAAAGGGGCGGAGCTGTTGTT---------CCAATCAGGGACTGAAAAAAAATGGCGGCACCGCTGTCCGAGGTCCT---------GACACAGCCCAGCTAGGGATGCGGGTGGCATGGAACTGGTGGTGTGTTAGGTGAGATGCCCCACTTGCATAGTTCTTCTCCGTGCCCCTTAAAGCTCCATAT-CTGGATAACAGTTAAGTTAGTCACCT-------TCTACCTCCTCCATCTCTCAAGCCCACTGATCCTTATCCTTCCCTTTCTTACACAC-------AATTTCCA-----CGAACTAATAGGCTACATGTCT------CTGTTTGACACACACACATCTGTGGACACAAACA-ATA----------------------------------CCTAGTCCATCTTGGCTATCTAGGACCAAGGGAATGTCTTCCTTCC------ATCTTCCCTGAGGCCTAA----GTGCTCTCTGGCTCA-CTGGCCCCAGAAAATCCCAACATTGC---TGAGTATCTAAG------------GTCTTCATTTCACCTCAGGTTCTTATGTCATCC----------------GTGGGGTGACC----TTGCTGTGGGTATCTACACAGTATTTGACTCAGTATGTAAAA-------TCCAGTAGGTGACATGAAAAGATCATGAAGTCTCCAA----CTGTCAGTCGAGCCTCTGATACT-TGCTGCACTATGAACACCTCTCCTTCTCATACCATGAACCCCCTAACCTTCCCCAATGACCCTCCCACTTTGTAACATCAGCTTGCCAGTGGCTTT----GATG---------GTCATTAAGACATAACTGTAGCATCTAGCGTTACCCATCCAGCA---------TGGGCCTTGAACAAACAAGAGCTGGGTAGG--CCAGAGGCGCAGCCCTGACTACCTC----TGACCCTGAAG---CAGGTGCTTCACTATGCTGAAGTCTGGCAGAGGCTTCACCTCCCC-TGCCTGTCTTGGAAGTCTGAAGGGGTACGTACAGGCTCTGTAAACTCCAGAGCACGGTGC-GATAGGCTGTGCCCCAATCCTT-----TTCAGCCGCTCTGAG-CAGTGTTTTCTCAAGAGTTCATGTTGTTTCCCTCCAATGGGGAGAACCATCATTTTCAGTCACAGAACAGTCTAGAACAAAGCCAGCCAGAGCAGAA-----CAGAACACATCATTGTTTTGCTTATGTCACGACTGTGCCCT--GACCCTCTGGGTCAGCCATGTATGCCTGGTGTTTAT-TGTG-------TCATTACATACAATTATTCCTT-CTGGAGCTGCAATTTTTGAAAAGTGGAAATACACGTTataccagttgaggacacagagtcagattccaaagtacctagttttaaatccaggctccaccacgctaccttaccagataactccaggcagctacttagcgtctctgagcctccatt-atgacttgtaagatgaggataa---tacccatctcataatgttgttgtgaggatt-aaagaattaatcttcactaagtacttgggcctgagcctgatccactcc-aagggcacaaacagac-----gtgggt------------------------------------------------------------tTGTTGTTG-TGCAGTTGCTGTTGGGGATATGTTGACAGCTTTGGTGGGGTGCACTCACTCACATCCCCAAACCCTTATGTTCAATTACCAGTAATGG-GCATATCTTGAAAGAGTAGTAGG------------------------------------------------------------AGTTCATAAAAT s bosTau2.chr5 56658152 2568 - 76426644 GGTTCAGGAAGGGTGTGATCAAGGAAACTCACCTTGTCGATGAAGGCAGCAAACCTGTTGTTGAGACACTTGATCTGCTCCTTCTCCTCTTGCTTCACGCACTGCGCATTGGGGTCGATCTCCAGGTTGAGGGGCGTGAGGAGGCTCTCATTGACTGACACGGTGGTGATGCAGGGAGGGCTGAGGCCGCCCACGCCACCGGAGCGGTACCCGAAGCTGCGGCCGCAGTAGCCGGCACGGAAGCCCCCGCAGACGCTGCGGCTACCGAAGCCCCCGGTGAGGCCGCGGTAGCAGGAGATGCCGCGGTAGGGGGCGGCCGTGATGCAGCAGCGGCCGGGGCGGGGTCCGCAGGCGGAGACGCAGCTGAAGGCTGGGAGAGCACGGTAAGATCCGCAAGTCATGGTGTTTCTTTGGGGGCACGGGAGGCTCTCAGGAGGCAGACGGCCTAATGGACGGC-GAGTGGACGAG------GTGTTCACTTCTTGAACATCGTTGGGCCTTTTATATATGTGAGGAGCCTGA-TGTATCCACGT-GTTAGGAGCAATTAGACACGTTTATGGGCTTGGGTTGTTTAGCTGCTGTTGCTCCTTCCTTAATGTTCTTAATTGGGTGCCAGATGAGGCCAGATGTTTATGGCCTTTTACCCTAAACTGCACAATTTTTGTCCTCAAAGGGCCAGCTCA-TCTCTCCTCACCCCACCCCAACCTCCTCATACACAGTTGGCGAAAGGTTTTTGAGGATAGGGGAGCGGTGACTCACGTTGGAAAGGAGGGCGGAGGAAGGCGGGGCTGCGGCTTCTCCCGTACCACCCATGTGATG--------TGCTCATGCCGCTGTCCGTGGTGCTGGTCACATCGGCACTGCAACACTGGGAGAGCGTAAGATC---AACAGATGG---GCTCCGTGATTTCCCTCACAGGGATGGCTGTTTTTACAGCACC--AAAGCCTCACACACCTGCTCCCAG----ATTCCTCACCTGCACCCATCAGCCAACTCTCTGTATCTTGTCTCTC--TCTCTGTTTCTCTCTTTCTCGCACACACACACAAACATACACACTGCGAACTCACATGCTGGACTTCCCATCAACAGTCTCACAGATACTCATACGTGCTCATACACACATACATCTACCTCCACTTGCACCTGACAAGTCCCCTTCTTAGACCTTATTTGTTAGCCTGTGCTGAGAGGAGGCACTCCCTCCCACAGAGTCTTCCATGAGGCCTAAGGAGGTACACCTTGGCTCAGCAGTCTCCAGAATGCCCAGCCATTTCCAACAAGGCCCCAAGCAAGGATAGCCTGTCTAGATTTCACCTCCAGGCTCCATGATTTCCCCAGGGCGCAGAAGGACTGGGGTAGACACAGCTATTATAAGTTTTTTTATAGCTTTTGGCTCAGAATACAAGAGAATCTTTCTAGACAGAGCCATATAGAG-----GGAGCATCCAGCGCCCTGCCA-TCACCCCCCTGATCCTATATTG------------CTTTCCATGTTCTAAC---AACCCTGCAAC-----------ATCCTTCTGTTT----ACAGCAATTTGTCAGTAGCATTAGAAGATGCTAATCCATATTGTCAGAACAAATCCATATTGGTGTGTACCATCCATCCAACATAGTTAGATTGGTCCTTGAACCTTATAAGGctgggtaggaaccag-gactcttccatgactagatctatgtgatctaggggagcaaggtagttcactcctcttggaaatggactaagcatcttcttcccagggctgccttggagaattacagagatgtgcatgcaCTCAACAAACTCCAGAGCACTGTGCAGATGTGCTTTGTTGTAATCATTAAGAAGCAAGAGGCTCTGGGACTGCATTTTCTCAA-AGTTCACATCATGATCCACAAATAGAAGCAACCAGAATTT----TAATGAAACAGGTTAGGACaaaatcaagtagagtagaatatagtagaaaacatcagagtgtagcatacataattaaaacacttcaggatcttttatttcaatagtatatgatatgtacgtatgtgtgtgcttaatcactatgaaaaattatttcttactataattggaa---ctaaaaagtttaaaTACatggcttatcagttaagaacacatacccagagtccaaactgcctagtttcaaagtccccctctcccagttt--ctagctatgtaacttcaagcaatttcttaacctctccctatttcatttcatgatttgtaaagtaggggtaatgctacctacctcatatagtttttataaggattaaaagaattaatccatgtcaagcagttacaatagagcctgacacactcctaaggatgtaatcatattagtGGTAGGTGTCGCTACTGCTGCAGTTATAATGTCAGGTTTGATGGAGAGGTAGAGATATGTGTTATTATTGTTGTTGCTACTGCTTCTGCTGTGGATATATCAGCATGTTTCATGGAATATACCTACCTACATTACTAAACCA-CATGTAAAATACCCACTAATGATGCCTATGTTAAAGGAATAATGAAGTGAAATGaagtgaaagtcattcagtcatgtcctactctttgcaaccccatggcctatacagtccatggaat a score=6964 s mm7.chr15_random 663288 328 + 7075849 AATACACAGGTCATACTTAACACAGCATCTGGCCCATAGAAAGTATCCAATTATTATTGGGAACACCATTATTCTACTGAATGGGCCTGTCCCAGGAGAAGAAAGGACCATGG------CCTTTACTCTAGGAAAGACCCTCATGTCCATCTCCTCCCCAGTCCAGTCCAACAGCCTAAGGAAAGATGTCCTCACAAACCTTCATCTTG-----------------ACCAATCCTTAAGCAGCGACTCTAACAG----AAAGGAAAGCTCAGAAGATCCAA-----ACGTCATCCATTGGAAAATCGTTCAGATTTGTGTTTTTCACTTGGTCTTAGAAGAGAATCAGAAATCCTTTGCC s bosTau2.chr5 56660837 352 - 76426644 aatacatggataattcttaacacaacagctggcacacagcaagtgctcagaaaatgttatcaactc--ttattCTACC-ATGGAGTTAGTCTTAGGGGCAAGTAGAACTGGAGACCTTTCCTTTATCCTGAAAAAGAACCCAAAATCAAAGGTCCATCC--TCAAGCCCAGCTACCTGAGGGAAGGCCCAATGAAAATCTCTCTTCTTAGGCAAAGGGAAAGTGTCACCAATCCTCAGGTAACTACACTACTGGGTGAAAAGAAAAGCTTGTACAGTCCAAAAAGTATGTTATCTGTT--ATAATTGATGA-ATTTGTGTTCCTTATTTGGCCTTAACAGACCATTAGAAATCTTTAGCC a score=10482 s mm7.chr15_random 664270 774 + 7075849 ttttgttttgttttATATTTCT-TCTAATCCCCAAGCCTCCTGGCTGGT-GGTA-TCCAGATATCCCATGAGACTGTTGGGGGATGCTCTTGGTAATCTTTCCTAACACAATAGAAGTGCAAAGGAAGCTCTTGCTTCCTTTGAGAGTAGGCCAGACCTCGTTGGCTGGCTGGA------------GGGGTTGAGAAGGAACCTCCTAGGGGAAGAGCCAATAGCCATACCACTGACAGAAGAG---ACATTAATTCTTTTGTTTCAAGAAGCTTTGTATAAAAGAAAA-------CTCTTCTGGAAGGGCCACCTTGTATGTGGAGACA--GTGGGCCAAAGTGGTCT---GACCTAGAGAGCAGTATCTTCCTCCAGCCTATGTGGACAAGTGGGTCTTGTGGTGAC--TGCAGATAAGACCGTTTTCATCTCATGAAATCTTTACTCAAAGCTCATTTCAGTCTCTTCCTCTTCTGGGGAAAGAATTG-----------------GGTGGGTAGCAA---AGATAAGAT-ATACCTTGCAAATGGGACATCTGGGGACTCTGGGATCGATATGACAT----GTAAGGTAAACTCCAAACACGTGTTCCCTTGAAAGGAGAG--------ACTACATGGAAGAAGGAAACCAGGACTCTGGGGCT-CTCTCATGTCAAGGAAAATAGACACGGAG------------ATGAGGAAAGTCAGAATATGCAGAGGGTAC-TTTGTAGACAT---GTCAGGTGCAGAGG-----AATGCCTGACTGCATTGCCC-TTCCAG-----------------------------GAAGGGCAAGGGAGGCTCTCTGGGAAGGGCGAGGATGGGCTTTCACAGGCGGAAGCAGGAGG s bosTau2.chr5 56661231 840 - 76426644 ttttatttatttatttatttttGCCTAATTCTAAAATCTCCTGATTGATCAGTAGCCCAGGGATATCATGGG---GTTGAGG-------TTGACAATCCATCCAAGTATAATGGAACTCTAAAG-------------------AGAGCAGG---AATTCCACTG--TGGCTGGACATATGGAAGTTGGATTTGAAGAAAAACTTGCCAGAAGGAGGGCAAATAGTCATGCC--TTCCTAAGGAGCTTGCATTATGTCTCCCATTTAGGGGAGCTTTATGTAAAAGAGAAACATTCTTTTTTCTGGAGTGGCCATCATGTTTGTGGAGACAGGGTGAACCAAAA-GACCTTTATATCTGGAGATCAGAGCCTCTTCAGATCTTGTTT---CAAGGGATGCCTGGAGAGAAGGGGTAAATCAGGTAATTTTAACATTGAGAAGTTCTTTTTCAAGACTCCCTCTAGTCCATCCTGCTcctgtgaaggatgttgcaaagcagatgccccaagatggatggtgggttagacaaggtaacatcttgt---tgctagattcaagaattctgtgattGATGTATCCCTGCAATATGCTGAAC-CCTATCTTAAGT----TTGGAAGGAGAGAGGAAAGCATTAAGAGGAGGAAGGAAATATGGATTCTGGAACTCCTGATCTGACAGGGAAGACAGACCCAGAAGTTCAGAAGTTCATGAGAAAGGGCAGAAGCCTAAGAGAGTTTGTTTATAACTATACCATCAGATCCTCAGGAGCTCAATGCCTGTTGACAGTGCCCATTCCAGGACAGTGTGAAATACAGTTAGTCTGATGAGAAAGGTATGAACGGATCCCTAGAAAGGGTGAGGACAGGCTT---CATAAAGCAGCAGGAGG a score=2437 s mm7.chr15_random 720830 59 + 7075849 TCAAAGATGAGAGATGCAT---------GACCTGTGGGTGTTGAGTAAGATGGTTTTATTGAGAGTGA s bosTau2.scaffold968 37211 68 + 305441 TCCAAGAGAAGAGATGCATTTTCTGGATGACACATAGGTGCTAAATGAGATGGTTTCATGAAGGGCAA a score=21515 s mm7.chr15_random 721029 579 + 7075849 TTACTTATTATTTCAGACATCCTTCAAG---ACATCTGACTCCTGTTAATGTCTCCTCATCCCTCCTTGAAGAAACCTCTTCAGTCCAGTGTTTCTACCAACCTCACAGTGACTTTCCAAAATAGAACCTGATCAATTTAATATTTCTGTA---ATAGGGCAGAGACATGTCCTCATGTCTGCATAAACACCATTTGGCAATGCACTCATAGGAATGCAATATGCCTTAATCACAAAAACTACCTCCAAGGTGTA-GACACGGTCTCTGTTCTACAAAG-CTTGGGTGCACATAAAGATGAAAAATCA---------TACTGAGAGTTCAGTTGACTGATTACCTTGGAAATGGGAATCAACGAATGGGAAACATTTGGGTAACGATTTCCATAGAGAAAGTCAATACGTTGATG-GCAAGAAGAAAATTGCCCTTCTTTGTGAGA-----------CTACTTTCTGTCTGAGACATCTCGATGAAATGCGGAGAAAGGCTCACAGAGGTGAAAGCCAGTGTTCCCTGACGTACGCGTAATATGTGCAAAGCCAAAATCCTTTCAACAAGATTAATAAGTGCTATTCATGG----TGCTCCCTGTGCAGACC s bosTau2.scaffold968 37982 601 + 305441 TTATTTATTATATTA--CATTCTCCAAGCCAATACTTGATTTCTGCGACTTCCTTTCAACTCCTTCTTGAA-AAACGTACCTACTGC-TTGCTTTCAATGAACTC-CAGTGACATTCTGAAATAGGGCTTGACCATTTTGACACTTAAACATCCAGAGGGCAGAGACATAGTCTCATGTCTTCATGAATATGGCTTGATTCTGGATTTGTAGAAATACAATATTCTTTAATTACAAGAATTATCTCTAAGGTATATAAGGTAGTCTCTGTTCTAGAAAGTCTAAGACGCAC-TAAAATTGACAAATGAAGAAATGATCACTGAG-GCTCTGTTGACTGA----CTGAGAAATAAGAATCAGCTAATGTGAAACATTTGGGCAACAATTTCCAGAAAGAAACTCAATAAGCTGATGCAAAATAAGAAAATTGCTTTCCTTTGTCAGAGACCCAACCTCCCACCTTGCTTTTAAGATACTGCAGTGAAATGCTGAGTAGGATACATAGGGGTGAAAATTGATTTTCCCTGAAGTGTACACTGTACATTCAAAGCCAAAATTCTTTCAACAAGATTAATAAGTGCTATTCATGGCGTTTGTTCCCTGGGCAGATC a score=25403 s mm7.chr15_random 722490 681 + 7075849 aatacagatgaggatTAATTTCTGATTAAACAAACGGTGTCACTGAAACATCAGGGTG---------------CATAGTTTCA-AGttgcctgctcac------tgtgaccataggcaatccttacctgctctctaggattcagtttacttctccataaaaggattGGGCTTTCTGACTCACAGATGCCCTTATCTTCGTGTCTTCATGATTTATGAGTCTTGGGTTTCAGAGCTGGATGGCTCACTGATGCTTTATCTGAGAAAAATAA---TATTGACTTTCAGATAAGAGGCTGGTAGGgtgtgtgtgtgtgtgtgtgtgtatctctgtgtgCATATAACTAAGTTTTAGTTATCACTAATGTCAAACCAAAGAAA------------CCATAAGAGATTTAAAGAGGCTGCCTAAAGACAAACAACTGAGCATTAGCATTGTGTGAGTTC--ACAACCAACTAAAACTCCACCTAGTGATTCTTTGTAATTCTTTAAAAAATTCTTGTGTTTCTTTTTCTTTTCCAAGTGAAACATCCCCAAAGAAATGAAGACATGCTTAAGAAGCAACCTTAGCTGGGGGCCTC-CCAGACTATTTAACTACTAATATTGCTGAATTCTT--AACAGGGAAGTTAGAATCACAAAGTGTTAACAACATACTCTGACACACTGTTGCTAGATTTGAACTCCCTGTTAACTCTCTGAAGAGAAAATGAA s bosTau2.scaffold968 39287 691 + 305441 AATATAGTTG-GAATTAATTTCCAACTATA------ATGTATTTgaaaaatcagggtgttggaactaagaagccctggttctagacctgcctgctttcaacttctgtgactgtaggcaattcttttcaccttttaaagattcagtttctgtatccatataaggacagggcttaaagatcctaagatgtcttcaatttcatgattttataatttatgaatcTTGGGTTTCAGAGCTGGCTGACTCACTGATGATTTATCTGAGAAAAATAATATTATTGACTCTCCAATGAGAGACTAATAT------------------------TTCCTGTGGGTGAAAAATTAATTTTTAGCTATCACTAATGTCAAACCAAAGAAAACATCCTGACGCCTATAAAAAATTTAAAGAGTCTGCCCAAAGATAGATGGCTAGGAACTAACAGTGTGTGAGTTCCTATAATTAACTAAAACTCCACATACGAATCCCTCTTAATTTATGAAAAAATTC-TGTGGTTCCTTTCCTTTTCCAAACTAAATATTCTCAGAGAAATGAAAATATGCTTAAGGAGAATATGTAGCTGGGAGCAGCAATATTGTATTTTCCTATGAATAGCATCTAACTCTTTAAATGATGAAACTAATATTACAAAGTGATAATAACATGCTGCCACATGCTAATCCAATGTTTGTAATTTCTACTGAATCTCCAAGAAGAAAATGAA a score=10840 s mm7.chr15_random 725651 376 + 7075849 AAAAAAGTTTCACGTTT-ATCTCCCTTTCTGACTCTGGGCTTGCGTTTTTATCATTTGTACAGTGATCCTCTGTCCCTTAGTTAGGAA-----GCTCATCCACTCTGGTCATGGACACA-GCGCCACACCTGGAACCCCCAAAGTCCCTGCTGA---AGTGTTTCTGTTTTAGATA--CTCCGAAGAATTTTAGGTCCCACGGCCTG-ACCCTGTGATGCCAGCCCAGACTCACACAACACATGCGGCGTTGGTACATCCTCTTCCCTCTCAGAATAAAGGTGAATAAAGGTCTTTTTACCAAGAAACTACAACAGACTAGTTTATTCAGAGACTGTATTTTCAGAAAGCCTCCAACAGTGTGTCACAGGCTGGGC---ATTGAACACGTCT s bosTau2.scaffold1113 160291 383 - 282037 AAAAATGCTTCATTTTTTAATTAGCTTTCTGACTCTGTGCTTGTGCTTTCAACAATTTCACAACGATCTTCTGCTCCTCGATAAGGAAAGCACGCTTATCC-----TGTCGTGGACACATTTAGCACATACAGAACCATCATAGGCCCAGCTGATTGTGTTTTTTCATTTTAGACAACCTCATAAGAACTTCAGGTCTCACAGCATGAACTCCTTGAAATCGGCCTGGGCACAGCCCACATGTG-GATTCTGGTGCTTTCCCAACCTTCTCGGTATAAAGGCAAATAA---TACCATTACCAGGGATTTGGGACAGCCTGGTTTTGTTAGAGGCTGTATTGTAGGACGGCCTCCGACGGTAGGTCAGACACTGGACCATCCTGAATACCTCT a score=2516 s mm7.chr15_random 726601 311 + 7075849 CAGCAATGTGTGACACAGAACGTAGCTGTGGGGGGCAGCTCTTTTCATTAGGAAAGAG-TAAGGAGTCACAGACTTAACATTCTTAGAAAGGGATTTGACCTGAAATTCCAGG-AGATTCCGGTTCTACTTGTTGAAGAGATGTCATAAAGATTGTTATACGTTAGGGACTACAGCCTCGTTCCTCCTGGTAAACATGG--------------GTCTGTGAGTATTTGGGGGATTTTGTTCCAAAAGAA------ACCTTAACATTCAACATGT-----------------------------------GACTCCACGAGGCTCCTTAGTTCTGAACACATGTGACCAGTGACTTGAAAGtaataata s bosTau2.scaffold968 42670 350 + 305441 CAGAACTTTATATCACAGAATATAAATGTGAGAGGCAGCTCATGGCTTTACGAAAGGGGTAAAGAATT---TGCTGAGCTTCCACATAAAGGGAGA-GACTTGAAATTCTGTGTAGAATCAGTTTTTCCTCATCAAAGGTATGGCAG------TGATACACTCTacaga--ggagcctgg--catgctgctgtccatggacacactaaatcgtgtcagagtggatatg----atttagcaacAGAATAACAACCAAGTGTAATTCCAGATATGTCAGGTGTTGGGTGGTTCCTTTAGACATCCAGGAAAGACTTGAAGAAGTTACTTTTTTCTGAAGTCATGTGACCATCGAGCTGAACATCAGGAAA a score=4912 s mm7.chr15_random 726955 201 + 7075849 GTTCTCCTTTCACAGTTGGGCAGGG---GAAGCATAAATCTTG-CTTCCCACATCTGTCTT-GTCTTCCTGGTTTTTTTCTTTCTG-CCCTTCAGGTGGGTGAGAGCCGCGAGGCCTGGTTGTGAGGCTGCAGGGCAACAAGTGAGTACTCCTGTTTGATGTAGAGAATTTT-----TGGTCTAAAGAACCAGCATTCGGAGAAGGGGAGTT s bosTau2.scaffold968 43092 199 + 305441 GTCCTCCCTTT-CAGATGGAGAGAGACAGAGGCTTGAAGCTGGACTCCTCCCAAGTTTCTTAGTTCTCCTTACTTTCTGGTTTCTGACCCCTCAGTGGGGTGA------------CTGGCTCTGAGCTCCAGGGGCCACAAGTGACTACTTCTGCTTTACATGAAGAATTCCCTCCATTTTCTAAAGAACCAGAAGACAGAGAGAGGAAGTT a score=27687 s mm7.chr15_random 729448 1075 + 7075849 TCGTAGTGTTTACTGCACGCTCTGTAACTG----TTAGTTGTGTT--CCTGTCATGCCTGTTGGTCTCACGAGAGCAGGCCTTGTGTACCTTTTT-CTGAAGCAGTTCACATGTGTTATACTGAGCTGGGCAGGCACGAGAATATACTTGGTAAATATCT-------CCAGGACTGAGTATGTTTTTAAGAAACCCCTCAACCATTTTTCAGCATAGTGTGTGTCAGATGAAATGCATTTGAGGTCTGGCTTTGGCCT--GGACATCCAGTTTGTGATTTCTgccagagagaacggccatgataatttagcatggaacgtattcagacatgtgttatcaatctttggaagaactcaagaaaccttaataaatatccatagtatgtctaattttgaataatatCAACACTAG------CTTGACATTCCAATAGCTCATAT-----------TTTCTCTTTCAAG--------------------TGTTTTATTCCATCTCCCTTTAAATCCCAAA-ATGTCTCCCTATTT---GAAAATGGCA--GTGTCTTAGTAACACCCTCATTATGGCTGATCTCTCTGTGCTCTTTCTTAGGGATATAA--CATCAACACTCGCTCACAGCACCAAGCTACC--CCTTTGGAGGGAGTCCAGAGGTACTTACTACATGGGAGTT------AGTGC------TAGATTTCTACCCTGGGTGCCTTGCGGATCCCTGAAACGCACTCTTTTCACTCAACA-----TTTAACTTCATAGCACATG----------------------AGAAGAAAAAGAAATATCCGACAACCCCAGACAAGGTGTGA-CTTAAAGATTCTTTAGGATAAAAATCAGTATAGAAATGCTGAGATCTGTGATCTATGGCATCCATGGGACTGGAAGTCCACCattaaaaaaaaaaactttaattataaaaCAGCTTACATAATCAAATGCCACATTTTCAACAATCCAGATACATTTCCAATATAATTATATATACAACTATCTTAACCCAATTTCCAGGGCTGTCTAGACAAACCAGTAGA-----TTGATTTGGAATTTAATTAAGTAGAGATATTTTTCTTAAAACCTTCCCAACAATGAAAACACTGGATAACTTT-GTTTCATGACCCTGAAGAGGTGGTTTGGAGAAG---AAGCACACA s bosTau2.scaffold968 43601 1159 + 305441 TCATAAcatttaccataccttttctaactgctttttaattatgtctccctttcttgactgtaagcctcataagaacagaagtcacatcttttctcactgtactgtttctagcatctggtactgagcttggcttctctgag--tgtactcagtaaatatttgttgaatatatgaatGAATAATTTTGGACAACATCTCTCAATAATTTTT-AACATGGTAAAAGTCAAATAAAACACATATGAGGGCTACCTGTGGCTTATGCACCTCCAATTTGTGATATCTGc-aaaaagtatggccatgataatttagcatggacattgttcaggcatttgttatcaatcttctgtataactctggaagactcaacagactttcacaatgcgtctaattttgaacagttaagatactggtgaaaccTTGACATTTCAATAGCACAGATGATTTCAAATATTTCTCTCCCAAACTGAAAGCATGATAAAGTTTTTTTTTTTTTTATCTTCCTTTAAATTAAAAACAATTCTCCCTATTTTTTAAAAATGGAAATGTGTCTTGATCACTCCTTAGTTATGGTTTAGAGCACTTTGCTCTTCATTAGGGAAGTGGTTCATCTGCTATTTCTTTATAAACCAAAGTGGCTGCCTTTGGAGGAGGATCAGAAG--CTAAACAAA-GGGAGTTTCCTCAAATACATCCTTGACATCCCTGCTCTTTGCTCCCTACTGGTCCTTGAA-TGCAGTTTCTCCTCACAATACATTATTTAACTTCATGGTGTTTGGTTGGTACTTTGATACTCTTTGAAGGaaaaaaaaaaaaaaaaaaaaCTTGAGTCAATGTAACATCATAAAGATTCCTTGGGATAAAAATTAGTATAGAAATGGTGAGAAACATTTCCCAAGGCATC------ATTCAGGGTTCACTAT-----GAACAAATGTTAATTGTAAAA-AGTTTACATAATTAAATATTGCCGTTTCAATAACCCTAACACGCTCCTTATATAACTATGTGCACAACTATTTTAATCACTTTTTAGTGGCTGTCTAGACAGACTGGTAGAATAACTTGATCTGGAATTTAATTAAATAGAGA------TTACAAAACTTTAAAAGGAA--AAAATGTTGTATGGCTTCAGTGTCTTTTTTTTGAAGATGTGGTTTGGAGATGAACAAGCATATA a score=9872 s mm7.chr15_random 730523 357 + 7075849 GAGAAAGCAA-------GCCTGCTTCAGAAACCAGATA-TGAGCAGAGGACAGAA-------------ATGGCATGCCTAGAAGCTCTTGCATGGGAGAAACCACTTCTGGGGATTTATTTTGTAATTCAAACTGGGAACCGAGTCTGTATTAGATTTT-TTTGTTTGATTGCAAGTCACATAGATGTTTTGAAAAATGGGGTTTCCCTTTACTGAATATTATTTTATGATTTCAATATTGCA-TTTTCTGCTGTTCTTCCAAGAAAAAGGT--------------CCTTTCTGTCTGTATCCTGCTAGTATATTCTCA----------GATAGTTTAAGGTGTAGTTTAAAT-GTGGGTGCAGTAAACAAAAGAATTCCAGCTTTAGTCTGGA-TTTGGAAGTGT s bosTau2.scaffold968 45016 403 + 305441 AAAGAAGCAAAGAGAATGCTGGTTTTAAAAACGATATGTTGGGTAAAAGAGAGAAAAAGAACAGGGTTACAGAAGGGTTGAAAGCTGCTATGTTTGTGAAACCATTATTAGGGA-TTACTCTGTAATTCAAATTTGGAACTAGGTCCTTAATATATTTCATGTGTTTGGTGGTAAATAGCATCAATG-TTTGAAAAATGATTTTTCCCTTTCCTATCCATTGTTTCACAATTTCAACATTGCCTTTTTCTGCTGTTCTTCCAAGAAAGAGGTTGCTGCAATTATGCTGTTTCAATTTTTATTCTATTAATATCTTTTCACCCTAAGTCTCACATTTTAGAAAGTGATTCAAATAATGGACCCAGTAAG-AAAGCAATTACATCCTCAGCCTAGAGTCTGGAAGAGT a score=13114 s mm7.chr15_random 897068 685 + 7075849 TAGTCTTTAAAAGAGTAAGATTTCACACAGATCTCTCTTAAT---AAACCAATGCT------TCAGACCTAAGAAGATCTATACGCAGT---------------------------GTATGAAT--ATAAGTTGAAAATAGCCAGTTGGTAATTTTACTTGAGGCTAACTAGGAAAATGGCATATTTTTTATGCACTATGCTTTTACAGAATGCATATATGCATAATGTATTACA----AAATTGATATCATTTAGTCCTTAT------GATCTA---TCACATATTTC-TCAGTTGT--CAAGGAAAATATACAATGGGAAAGCGATATGAAAGAG-----------AGTGCA--CAGT-GTAATTTTCACATGACCTAGATGATTACAGGAAATTCCTCACAGGGAGCTATGCACACTTTTAATCAGTGAATGCGGAATCTTCCTTCATTTCCCGAGGGAAAAATCTATAAAATATTGACGCTTTACAGAGGACTGTAAAAGAGCACTGTTGTTTACTCTCTCATACCTTTACTGATTGCAGTTTTTCTTCTTTCTAAACTTGTTCTCATCCAGCATCTCTCCTCCAGGGTGTCTTGGAGAATTTCCTTCTCAGTTTTAAACTCATTTCATCCTCTTCATC--AGATATATGTACAGGTCAGTCTCTGTTTTAAGTGGGTGTACTGTTCTGCTAGTCCCTAATAACTTTTCTACCTGGAGTCTAGACATTCTGGAGAATGAGAAAAAATGTAT s bosTau2.scaffold376 233669 723 - 510862 TAGTAATGGATATAGAAGGAAATGACACAAATCTATTCCAATTTTCAACCAATCCTACTCTTTTAAGAATAAAAATATCTGTGTGCAATAGCACAATATTTAATATTTCTTTAGAGGTACAAATTCATTCACTGAAAGTTGCCATTT-----TTCTAATTAGAA--AACCATGAAATTG-----TTTTTTACCCAATTTTCTGT------AT-CACATAAGCAAAATGGACCACAGATAAAAT--ATATTATTCAATACTTCTTTTGCTGCCTTAGTTTTGCATTTTTCCTCAGATGTGGCAGAGAAAAAAATCAA--GGAAGGTAATAAGAAAGAATTTCCTTGAAAACTGCAAGCATTAGTAATTTTCCCACCATCTAGATGGTAACAAGCAATCCTGCAAAGGGAGCTA--CACTGTTTTACTTAATGGAAATAGAATCTTCTATCATTTCTCAAGGGAGAAGCTTATAAAATATTGATGTTCTGGAGGGGAGTGTAAAATAACAC----AAATACTCTTCCATGGCTTTGCTGATTGCTCTGCTTCCTTTCTCTGAAAGTGTTCTCATCTGATCTTTCTCCTCCAGGGAGACTT-GATATTCTCCTTTGCAGTCTCTGACTCATTCCAG--TTTTCATTCAAAATTCCTATAGAAGCCTGCCTTTCTGCAAGGCAGAAAAACCATGTTTTTGCTTTCCAGCACCTCTCCTACCCAGGGGCCTCAACTTAAGGAGAAGGTGATCAAACACAT a score=17338 s mm7.chr15_random 1054442 484 + 7075849 AGTCAACATTTCCGAGCCCTT---TTCTCT-TGAAAGGATCAAGTTTTAAATATTAGCATAAggggagagagagggggagagggaggggACACTAACTATAGACTTCCTTGCA--CAGAAAGCTTTGGCGCTTGGGACTTGGGGAGAGAAGTCTGGCCAGGCACCCTCAAAATAGTACACTTGCATGCTATCCTCACCCAAAATACAGACACCACATTGGCGCAGGTACAAGCTGTCTGTTTCTATACAGTCTGG-AAGTCTGGAAAATAAACACTCCCCGAGCCGCCTGCCTGGGAGCCACAGAGGAATCGGATTAAGCCATT-CCTAGGAGCGGCGTTGCTCCTCCTGGGAGAAGACAGATCGGGAAGGCCCCGCGGTCAGGGCTGT--GGATGC---GTGGGACGAGGTGTTTATGGACTTCAAATTGGTTTTAAACATTGTCTGCCCTTTAATAAGATTTGGCTGGACAATGTTATCTTC-GAGCCGGGGACGC s bosTau2.chr5 1357458 478 - 76426644 AGGCAGCATCTTCAAGCCTCTCAGTTCTCTGCAAAAATCTAAGGCTTGAAATCACAGCCTCACAGGAGAACAACTG----------------CTAACTCTAGCATCAACTGCAAGCGCAAAGACTTGGCACTCGGGATGCGGGGAGAGGAGTCTGGCCAGGCACCCT-AAAATAG-GCGATTATGTTCGATCCTGGCCCAAAACACAGACGCCACGCTGGTGCAGGTACA-GCTGTCTGTTTCCATACAGTCTGGCAAGCCTGGAAAATAAGCATGCCACCCCCCTCCAGTCTGGGAGGGACTGAGGAATCCGATTAAGCCATTTCCTCGGAGTGGAGCTGTTCCAACCAGGGTAAAGTGGATTTGGAAGGTACAGCA-TCCTGGCTGTTAAAATGCATGGTGGGGGAGGGCATTCATTCACTTCAAACTGGCTTTAAACGTTGTCTGCTCTTTAATTAGATTCCGCTTTACAAAGTTATCCTCTGCGCCCGGGGAGC a score=8002 s mm7.chr15_random 1059920 490 + 7075849 cacacCTGTGAGTATGAATGTGTACATCTGTGTATGCAC--------TGTGTTGGCATGGCAACATGCGACCTCATGGAGGGCTTTCTTTTGGGTATCTTGAACTAGAATATTGAAATCTGAGAAGCAACTCAACTGTCCCCTAACCT-------CCACT-GGGGCCAGGAAGCACAAGCTGCCAGCTGGTCTATGTCCTCCT--AGGATCCTGGGTGTCA-CCTCAGCTCTGACATGGCCTTTGCAGCACTCACCTGTCTGTCAGTAAGATGCACAAAAATCACTTTTCGTTTTTGGAACATGGGAATCAGTTCAGAAGGGGCTTTCTAGCCCCCCCCCCGGG--ACTCTGAGGAGGA----CATATGTCTTTAATGGGGTCTGATGGAATCTGGAACTCACTGGTGGGAAATTGAAAGCAAATGAGGTCCATTTGCTGAGTGTGGTTGAACCTCCCAGCCCTAGGATGTCCCCAGGGG--GATGAATGATAAGCAGACAGGACCTGCAGCTGGAA s bosTau2.chr5 75063160 467 + 76426644 CACGCTGGTGTGTATGGGTGTGCGCGTATTTGTACACATAGGATGCGTGTGTTTCCATGGCAACACGCCTACGGATGGATGCACTTAAGCCGGGGATGCCGA----GACGCTTGAGGCCGGGG-------------TCTCCCCAGCCTGGAAGCACCACTCGGGGCAATGAAGT---------------GTCCGTATCCTGCTCAGGGTCCCTGTGGGTCGGCCGTGTGTCTGACGTGGCCCTTAAGGCACTT---CACCTGTTGGCAAAACTCAGAAATGTCACTTCTCTTTGTTAGAAAATAGAAATCAGATAGGAAGGAGCTCTCTGG-----CCTGTGGAACACTCTGGGGGTGAGCCCAGCACATCCTTCGTGGGCAC-AATGGAATCTAGAGCTTGCTGG-GGAAGATGGGAAGAC----AGGGCCATTGACTCAGTGCAGCTCATTCTCCTCGCCCCAGGGTGTCT---GGGGCCAGTGGCTGACGC-CAGAAGAGACCTGCTCCTGGAA a score=4062 s mm7.chr15_random 1061105 224 + 7075849 CAAAAAGCTGTCACCAAGAGCAGCTGGGGTTTATCTTGGCCCTGTACTCCTCCAGACATAGGAGCCTTGAAAAAGCCAAACAGATGACATGGCCTTCCTGCCTGTGTTCTCTCCAGCTG-------GAGCATCCTA-TTCTACTGAGTTCCAGCAGGCAAGGTAGGGGAGTCTCCACCCAACAGAGTAGCCCC-ATCTCTCTATCATCAACTCCATGTGGTCCTGAGGTCCTG s bosTau2.chr5 1364231 218 - 76426644 CAAAAAGCTTTCAGGTTGAAGACTTGGGGTCTCTCTTGGCTGGGTGGTCTGGCAGACAGCGAAGGTAGGGAAGGATAAAGCAGGGGCCAAGG--TGACTGCCTGTCCCCCGCCCACCTGTCGGCCTGAGCATCCTGCTTCTGCTTGG-CCCGGCAGCCCGGA------------CACCCAATGGCACTGCCTCGGTCCCTCTGTGCACAACTCCCTGAGGTGCTGGAATCCTG a score=13017 s mm7.chr15_random 1062346 495 + 7075849 TTCCAAGGTGTTCTAAATAAAGC-TGCCATTGTGTCT--------------------GCAGGTAAGAGCCT--TCTGGGCATA--AACATGGGTGTGAGAAAGCCAGGGGAACACATGTG-----ATCT------GCCACATCTCAGTGAGGCCA----TCGAGACAACCGGAAAG-GAAAAACGTTTCCTAAGAGCCAGAAGATCCCAAAAGTTTCCTCGGGCCCTACTTCCTCCAGATAAGAATTCAATTATGCAAATGCATGTACTTTTCTTCCTCAAAAATAAGGTTTGAAAGAATAGGACATCAAATTCCAACATGAAATCTTGACTATTATTTTTAACTCTCCATGTGGAGGGAGCATATATTTCCTGCTGAGAGAGGGAAAGAACATCCAACGGGTGTTTGCTTTCTTCCCCGAGAGCTTCTGCCTTGGGGGGAAAAAAATACCATTAAAAGGCTAAGGACTGTGGCATGATGCTGAGAGACACTGGAGAAT-AATTAAATCCTGTTCGCTGTCCTGTGAGGAAAACCAG s bosTau2.chr5 1365508 524 - 76426644 TTCTAAGTAATTCTAAATAAAACCTACCATTAATTTTTCACTTCCCCTCTCCTAAAGGCATATAAGAACCCCATCTGGGAATAGCAGGAAGAAGAAGAGAGTGACAGGGGAAGACGTGTTGAAATATCTTTCTTGGCCATATCTAGGGTGAGCCAGTACCTGAAATACTAGAAAAAAGGCAAGTGTTAACTAACGGCAGGTAAACCTCCAAAGTTTGCGCAAGCGCCGTCTCCTTCAGATAAGAACCCAATTGTGTAAATGCATGT-CCCTGCTCCTGCAGAAATAAGGCTCAAAGTAATAGAACATCAAATGCCAACATAAAATATCGTCTATTATTTTTAACTTTCAGTGTGGAGGTTGAATACATTTTATGCTGGGA-AGGAAACGACCAC---ATTTTTGACTGTGTTCTTTGC--AGAGTTTCTCCTTTG------AAAACATGACTTTAAAAGGCTCGGGACGGGGATGTGAACTCGACAATGACTAGGAAGCAAATTAGATCCTGTTAATGACTCGGCGAGAAGAGACAG a score=4913 s mm7.chr15_random 1064042 381 + 7075849 gaaaagaaaagaGAGCATAGCAACCAACAAGTCCTGGAAACACATATG------------GCAATGTGGACAATTGCTCTGATTGTGTGAAACAGGAAAGCTACTTTGCAAGGCAA------CACA-------------CACATAACACAAACTGGTGCAGAGATGGTGGGAGACACACCTGTGGTGCATCCTGTAT-CAGAACACAAATCCAAGTCAGAGGA----TTCTAAAATAGTGG-AGAAAACGACCAGATGCACCCAGAGACATGAGCTGGGATCACATACATGGAG--TGCATGTAAATCTCTACAAGTCACAGG-AAAGATGTTTGCGCATTCTTGTAAGAACAGAAATGAAGAATAAAATGGTACTGC-TGGACCCGGTTCTGAGCAAGAAGGAGTCCAATGTGCACAGCAC s bosTau2.chr5 1367009 401 - 76426644 GAAAAACAAGCAAAACAGACAAACCAACAAGAT---AGAAGAAATGTGATGAGTTTGGCTGTACGGCGGGGGGTTGCCTTGAGCGTATAAAAAGCAAAACCACCTTTGCACGGCAAAAAGGCCACAAGCAAAGTGCAGTCACGTAGGACAAACCGG---------GAGGAGGCACGCGCCTG------ATCTCAGATGCAAAATAGGGGCCTGATGCAAAGACAGTCTTTTAAAGCACTGACACAAAGAGACCAGCTCCCGTGAGGACAGGGAACCGGGGCCATGAACACAGAGCTTGAATGCAAACTGCCGTTCGTCACGGGGAAAGAGGTTCAGCCACTCTCACAAGAGCAAAAATAAGGATGAAAATTGCACGACAGGGACAGGGTTCCGGGCAGGACAGGGT---AAGTACCCAGCAC a score=7247 s mm7.chr15_random 1120644 478 + 7075849 cttcttaccaccagcttccctgtctcctttctctcct------ccccctcctttccctgttcgtgctctctctgttttctgcttctTTTCATCTCATCTTGCTTTCC-------TATGTGACA------GAAAAAGATAAGCCTAGACTCTTGATAAAAATGAATGCCTTCCTCCTCTT--TCCCTCACGGACTTAGACTGTACCCATATTCAAAGTCTTCTGTCCTCATCACCCAGATTGGT-----TTAGGTTGGAAATGGAGATGTGCT-TGTGCAAGCTTGGGTATGGAG---TTGTTGACAGGACTCATCGGTTATCCACATATCTTACAGTGCTCCATCTTAGGGAAAAATTAAATGAAAAGAAACAAGCATTATAAATTTTGAAAGGATACTCCTGTGTAATAATTGATTTCTACA-------------GGCTAACAGCCGCAAA------TTCAGTGCAGAGTCATTT-ATTTTGGCCACAGAATTTTGGGTCAGTT-----TTGGTTAATGCAAGCTGGGCTGA s bosTau2.chr20 23922739 516 + 42952723 CTTCTTTCCA--ATCTTTTCATTTCCCTTCTGCTCTTACCTAACCCCACCCCCTCCCTTTT--TCCTTTTTTATATTCCTTTCACTTCCCACCTCACCTCTCTTTTAAAACTGGTCTGTGATGACTAATGAAAATGACAAAGCAGAAATCTGACCAAAAGTGACTCCCTCCCTTCTCCTCTTTTCCCAGAGAGCTGGAATATGC--ATGTAAATATTTTTCTTTTCCCA----CAAGGCTTGTACATGTTTAGTTGGACATGATTTCATGCTGTGGAAAAGCTTTGACAGGCAGACTCTGTTAACCGAATTCCTCAATTACCTGTAGGTTTTACAGTGGTGGGTTTTTAGGAGAAA---AATGACAAGAAGTGA----CATGAATTTGGAAAGGATACTCTTATATAGTAACCTGTTACCACAAAAAATAATGTCTAACAAATAACTGCAAAACCCAGTACAGTCCATGATAGTTGAATTTTGCTCATTCAGCTGCAGATCAGTTACAAGGTGGCTGATCCAGGCTGGGATGA a score=5941 s mm7.chr15_random 1123267 468 + 7075849 ACACACACACAATTTTTTTGTTCTTTTTTTCTTTTTATTTAAAGAAACAGTTCTATTGTCTTTTGCCACCAGATGGCGATCAAAGCTAACAAGCTCTAACAAGCT-------CCAGGCTCCAA------CCCTGACACAGCT----TAAATATTGTGCTA-------AACAGACCTTCCATTCTCC-CAAATCAGGGGGTCCAAGCTAGAAGATCTACTTTTAAAAAAGATCAGCATCCACTTGAGTTCCAGGTACTAGGACCTCTAATCGAACT---------------GATTTTTCCCCCCAAAATCAGGTGA-ATTTACCCAGAACACTTAAACTCAACT------CTTCTGTTCTTATGAATTTCAGAGACTTCCAGGCCGTAAAT-ACACTCATGCTCACAGTTAGTCAAGA---------------------------------AGCATAGATctggaggacgtggctcaggtgat--agaccgcttgcata---aggagaggaggaagccctgtgttcgattcctagcactgcaagat-----ggagtaggt s bosTau2.chr20 23926363 533 + 42952723 ACGTACATAATATTTGATTGTTTCTAGTTTTTT-----------AAAAGGTTTTCTTGCTTTTGGTCACTAGATGGTGCTCAAGGCCAACAACCTCTCCCAAGCCTTCCCTGCTTGGCCATAAGTCAGTCCCCAGCACGGCTGTGCCAGGTATTCTGGCACTTTGACAACAGGCCTCACGCCTTCCTCACACCAGAGGGCCTGAGCTGGAAGAGCT------------GATCAACATCCA-TGGGGTTCCTGGCATCTGGAGACCTAGGCCAACACTGGGACTATATTCAGAACTCTTTCCCATAAATTTGTTAACATTTTTCCAAACCAAATAAATTTACCTTGGAAACTCCAGTT--TAGGAACTTCAGAGGGCCTCAACCCAGAAATGACATGCCTGTCCACCTCTGGCCAAGATAAATTATCACAAGGGTTACCATTTAATGCAATGGAATAGGTATTTATTgggcttcccaggtggctcaatccgcctgccaatgcaagagatgcaaaagtaaagggttcgatccctgggtcaggaagatcccctggggtagga a score=4522 s mm7.chr15_random 1123890 206 + 7075849 aaTTAAAATTTTAGTATAAAGTCTGCCATTCCGGT----TTTTAAATCGATACTTCTGAGCTTACTGCTAGGTGAAAAATTATTggagcccttaagaaatgcagaaagtcagggcctgctgttgacccactgggccgtaatctgcatttgcatccttctcccaggtgat---tggtttcatattagaatttgagaagcaCAAAAGAGCCACCG s bosTau2.chr20 23927026 203 + 42952723 AATTTAAACTTTC-----CAGTTTACCATTACATTAAAGCTCTGACTCGActactcaagcctggctcacggggcaaaaccca--ggagcttatttaagatgcagaatttcaggatctgctctggactcaccggatcagagtctgtatttgaataagact---gggtgatatgtgggatcacatttcagtttgagaagcaCACAAGAGCCACTA a score=2271 s mm7.chr15_random 1124300 74 + 7075849 TTCTGAGCAGAGTAGAATTTCAG--CCCTCTAGCATTTGGGACTAAGAGCT----------GACTTAATCTGTACTTTACCCAGGG s bosTau2.chr20 23927299 77 + 42952723 TTCTAAGCACAGCAGAATTTCAGTGCCCACTAGC---------CAGGGGCTCTTGTACTGGGGTTTAATCTGCACATTACACAGTG a score=8438 s mm7.chr15_random 1124446 307 + 7075849 TTCCCACATTCTTCTCTCAAACGCTTTTTTCGTCCCATCTCTCATTCATACAATTCTATATGATTTGTGAACTCATACAACCACTGTCACCCACATACATAATATTTGTTTAATCGGGACA--ATAACTTACCTTAAAAATGTGTCTGCAAAAATTATTATTCGATTTTTTTTCAGCTGCTTGGAATATTTATGACT-ATCCATTAGCCCTGGTAAGGTAATCAGGAGTTGGTTATATTCCCAATCCCGAGATAAACACACAGCCCCTCATAAACTCAG-GCTCCAGATAGCACAAGACGAAGCAGTCCCA s bosTau2.chr20 23927435 294 + 42952723 ttctctctctcctctctc----tctctctcCTTCCCACCTTCCATTCTTCCCTCTCTCTTTGGTATATGTGC-CAAAGATCCACCATCATATACTTGTATAATAATTGTTTAACCAGTACACAACAGCTTACCTTAAAAAGGTGTCCCTGAAAACACTTTTCAG-----TTTTAAGCTCCTTGGAATATTGATGTTTTATCCATTAGCCCTGATAA-----TCAAGAGCCAATTATATGCTGAATGCTGGAATAAACATACACCCACTgacctcctcggtggtccag-tggc-taagactctgcattccca a score=7479 s mm7.chr15_random 1124772 442 + 7075849 ACATTCACAGCAGTGCGGGGCAGCTGGTGTTTGTCTTAAAACGTCTCGGCAT-TTGTTTATTAAATAA-------CGAGAAAATATTCCTGATGATCTCTGCTTTGATGCTCATCTTGTTCTCACTAAGCCCTTT---TCTG----------TCTGGGGAATTAGGTTAAGTCTTACTGGAAAGCTGAGCTGCTCTGGCTAACCTTC-CCTCGGAGC------TGGAGAGTAACCTGGGGTTTGGGCGCCTCCAACAGAG-TCAAATGTCTGCTAAAAGAAGGCGTGGAGGAGAAAAGGAGGATCATGGGCAATTGGGGGGGGGTGTTAGGGAGAAGGAAGAAAGAAAAATAAAGA-agagagagagagacagagacagagagaaacag-----agacagagagacagagggacagagaCACACACAGGGAATACACTGACAGCTCAGAGTAATCCTAACAGCTCTAATTGGTGATG s bosTau2.chr20 23928206 439 + 42952723 ACGTTCACATCAACCCAATACAACTTGCATATTTCTTTAAATGTTTTGGGGTCTTGTTGAAAAAAAAAAAAAAAGCAATGAAATATCCTTGATGGTCTTTGCTTTAACTCTTATCTTGTTCTTCCTAAGCCTTTTCTGTCTGATGCCCAGCATCTGAGGAATAAGGTAAAGGC-----------CTGGACTG----GGCCAGTCTTCTCCTTGGATCATTCCAGGGATAGTGACCTTGGTTCCATGTGCCTCCAAAAGAGAGTAAAGATTACCTAAAAGAAGAAGAGTTATAGAAGGGTAGGA-----------------AGGATCTAGAGGAGCACAGGTGAAGAGGCATCGATAGACGGCGAGAGAGA---AGACGGGAAGGGGCAGTGGGAAGGTAGGAGGAAGGAAGAGCGAAGAAGAACTGAGAAAAAGTGCTGGTGATACAAGGTAA---TAACAATTAAAATTAAGGATA a score=7159 s mm7.chr15_random 1125411 623 + 7075849 TCATACAGAAGTAGATGAAGGCTTCCCTCCATGACCCCTAAGCTGCCTTTCCCACGTGCCCAGATTCTCTGTTTTATCTCCCACCAGTCCTTCTGCTGGCCACATCTCTGAGACTTTGCTCTGCTCTGCA------TTTATCAGCATGGCTCCCTTGCTCCTCCAGCCCCTCCCCCTTTACCCTCACCCTGCTTTATTTTCCTTTACAGTGCTTATCACTCTCTG---------ATATCCATTTCTTTCATTGTCTGACTCACTGGATTAGAAAATCCGTCCTAGGAG----------------AATAGGGC---------------CAGTGGCTGGTCC----TTAGGGAAGACGGATAACCCCTGTGGAGGGGATGCAGGGTTTGCTATGGGCTGGGCTCCCAG------------GGCAACCTGATTAGTCCTCAACATAACCCTATAAAGC--AGGCTTTTAC---AGAGGACGTGGAGTCACACAG--------------GACCAGATTCTTCTTTGCAGAATTCTTCTCAGACTATCCATTCATCAGTCTTTCTCCAAAACTTGTT---GTTGAATAGGTGCcagctctctggtcaaacccacaccactgta-tgtttctatatggaaagctgtaatggcca-cagccatactcagttgtttcagttttgtttatagctgctttt--------gtgtt-agagttgagcagt s bosTau2.chr20 23928892 664 + 42952723 tcttatctatgttgaaaaaggcttcccccaaatat-------ctacctggctcacttcc-----ttccttagtgtactt-----------ttctgtt--caaaatccct---cctcaggtccaccctacggataactttacaaacatacctcc-------------cccatccaccctta-----atcccgctttattttccttttcagcctttatcacttcctgacaatttacacatctatttatttcattctctgacttgctggaccagaatttgagttctaggaggccttgttttgctcgtgatgggacctccagcacccaggacagtggctgacacagagtcaggggcatca---aACCTCCATAAAGGTGAGCGAGGGTTTGC----ggcattcttctaagtccgctacaatcgccaacatgtttaaccttcaccagaaccctgtgaagccagggattgtactgaagcggaacctgaggcaccaagagaggaggtaacttgcccagggtTTCTTTGTTCGGGTTTTTCTCTGACTTGGACTTGACTAATCTTTTTCTGGTACAGGGcaagggtgagaacactatagctcgctggccaaatccagcttgccatcttgtttttgtaaagaaaatcttagtggaaagcagccaggtccactttttaca-tattgtctgtgactgccttctggctaaaatgttaagagttgagtggt a score=7663 s mm7.chr15_random 1126680 337 + 7075849 ATAATAACATAGGCTGTGATAATTGCTTTTATTCAGTGTCAGGCTCCATTCTTGGGATTATAC--TAGACCCTCAGTGTTTGATGCTCTGCTTTGGTCTGTTGGGTTTTCCATAAGCGTTCACATTCTTCCCTTGCAAGAA---------CAGAC------GTAGGTAGGTACGGCCATAGGACCTACTCTAGTCAAAGCATTGTTGGAGGATGTGCTGGGTGTAGATCCTGCTCAACTTT-----ACCTGTGCACACAT---CCCACGGTTTTCTCCTGCGTTCCCCCCCACAACTATAATAACCAAAAATGTTCTAGAAAGTGGGTACTGC-TCTGCTGGGCCTCAGAG-ATGAACAATGCA s bosTau2.chr20 23930300 341 + 42952723 ATGATAACA------GTAATAATAGCTCTTGCTAAATGCCAGGCTCTCTTCTTGGCATTTTACTGTAAAATAGTAGTGTTTAATATT---------TGCGTTGGGCTTTTTGTAAATATACTGACTCTACGTatggtagaagtatgcttccacacccactgggaaataagtatagctat-ggactcgctttggtgaataaagtgttagaggaaatggcacatgtaagtctgactcaaacttgaatagcctatgcacacatttcttcattcttttttcctgtctttct-------accatggcaaccaaaaatgtttcaagaagtagatattatgtcagttgggtctcagagtgtggataatgca a score=8423 s mm7.chr15_random 1127444 545 + 7075849 GGGCTACTTGATGCTGAAGCAGCATCTATCCCACCATAATGAATAA-----------AGCGTCCCTAAGGTGAAGGCTCTAGAGTCTTAGGAGCACAAGGACCTCAGATGCTCCTCGGGAGCAGCATCTTCATTGTCTTGCATCAGGACGTTACTCTGTGATATGAAGAGGAGG-AAGTGATATGTATCTGATGTCAGCCATGTCTAAGGTA---CTTAGGTTGCCATGGGGAGG--------ACAGGAGAGGAACAAGGCTCTTGCTG---------------------AGTCACCTTGTTAT---TTCAGCTAGAGTCAGAATCATTCTAATACCCCCCCCACACACACACACACCCAAATATCTGCTC-TGTGGCCACTTTAAAATTCTGTCCCTGCTCATCACCTTGGATGAAGGTTCCAAAGGCACTTATTGAAGTGCCCATGCACAGGCATGCCTGCAGGCACTTGAATTTAGAAAGAGGGTATAATAAATTACTAGACATTATAA-----------ATATAGAGCTCTCTTCCCTGGAAGGTAAATGACTGGG-CCTAAGAGAGATACATTTTGAAACGGGTTTCAGGAAAAGGCTTA s bosTau2.chr20 23930726 543 + 42952723 gaactgtttcttactgaagcaccagctagcctatcctgactaataACACCACCATTAAGATTCTCTTCAGGTCAAATTCTGACGTCTTAAAAACAAAA----CTCTTTCCTTCCTCAGGGGTAGGATCTTCATTGTTTT----------------------TGTCAAGGAAAGGTGACTTATGTGTGT---------GCAGTGGATAAGGAATGGCAGAGCTTACAGGGGAGAGGGACAAGAAACAGGAGCGGGACAAGGTTCTCTCTGCATGACGATGGTAGCAGTCCGGATTGCCCTGTTATCATTTCAGTTATAGTTTTAGGCAATCTTATGCCC---------------------AAATATCTGCTCCTGTTGACACTTAAAAACTTCTATCCTGCTCATT-CCTTGGGT-AAGACAGTAAAAGCTCTTATTAGAACATGCGTTCATTCAAGTGCATGCAGGTGCGTTGTTTTCTGAAGGG----CAGAGAGTTATTAGCCCTCACAGTAAAAGACGATGTGTCAAGTTTTATTCCCTGGAAGGCAAATGAAGGGGGCCTAAGAGAGATATATTTTGCAAAGAAATGTGGGGAAATGTTCA a score=2524 s mm7.chr15_random 1128381 177 + 7075849 AAGTGTGGATGACCAGCAAAGATAGCACCAAGCAGCAGCCACACTGGGAATCACAGTGACTAACCACTGAAGAAACTATGTGA-------AGT-GCTGCCACCACTGCCATCAGCAAATCA-----AAATGCACATTAAGCACCTACTATGTGTAAGGCCCACAGTCTTCTTGTG-GAATACCAGCCAGCA s bosTau2.chr20 23932162 188 + 42952723 aagcGTG--TAACCGGAACAGACAAAGCCAAATGGCAGCCACATTAGAAGGCCAGGTGTCTGAGGAGGCAATGAGCCATGTGACTGTGCGAGTAGCTGCCCTGACCCCAAGTACCGCAATAACAGCAAGCGTATCCTGAGCACTGACTCTGTAC-TGGCCCACCATCCTCCTCCGAGAACGTTGGCCACCA a score=6341 s mm7.chr15_random 1128677 341 + 7075849 TAGAGGGCAACATGCTTTCAAAAGACATGGGCTAAATTT--------------CCTGGGGTTAAGGCAGAGGG-----------------AAAGTAGGTAGGTGGGAAGAGATGGGATATGCCTTTAAACTCATAGTGCAT-AGAGACAA----GATTCTTATACTAGAACGGAATAATAAGCCTTGAGAAGTGTCACACTCTCATGCCCTGTTGGGAACAACTGGACGAGGAACAACTTTGGGTTGCCAAAGTCATATATT--GGATGATA----TATTTTAAGGCATCCAC----------------------ATAGCAGCAATTTCGGAAGACAGGAGGGCTTTGTGGGTTAAACGATGGTTCTTCTTCCAGTGTGCATCCTATTGCTTTTGTTATCACCCt s bosTau2.chr20 23932492 395 + 42952723 TGGAGATTGGCAAGCTTTTGCAAGCCATAGACCAAGTTTACAAAGCCAACTCTCCTGGCGTGAAGGCAGGAGGGTGTGGAGTCTCCCAAGAAGCTGAGTGGGTGGGAAAAGATGGCATGAGACTTCGCACTCATGTTGTATGAGAGACAAAGGAGGCTCTGGGGCTAGAAAGCAATAAGGGGCTTTGGAAAGAGCAGGAACTTCCT--CCTTCTGCACAGACAGAGGCGGGGACCTCCTTGGGA-----AAAGTCTCAGAGTCAGGACACTACTAATATTTCAAGGTACACATGAGTAGCATATATACTTAACAAATTTCAGGAATTTAGAGGAATGAGAAAGATTTGTGGGCTAAATAATGCTATTTCTTCCAGTGT---TCTAATTATTTTTTTTTTTACTTT a score=70804 s mm7.chr15_random 1130466 2653 + 7075849 TAATTGTTAGCGGTATTAAGATCTAATGAGTCAGTCAGAGAATGAAGCTCTGTTATCTTTCTCTAAATGCAGGTCCAAGTGTAGAAAGCACTTAGAACATCC----CTTGAAAGC------------TGTGTTCAAGAGTTTGCTAATCTATCTTAACATCTCTTCATGGCATATCCAACCCTGTAGTAACTACTGAGTGAGTTGAAAGGCAAGGTTTTGACAGCCAGTGT-CCTCTGGTGTAAGGTAAGGTTTT-GTGACAGAAACACATTTCCCTGACCTACCAGATTTACTCTAAACTATTCTGGTTTAATATTTAGAGACTTAAATGCTACCCAGGTTTCTAAGCTTAAAATCTTTGTAATGCTCAGTGCATCCAACCGAAAATACAGAACTTCAAACTCTG---GTTTCTGCCTTAGTTGTTTAAACTCATAAGGCATTGGATATAAAAGAAAAGATAACAAAAGAAAATTTTATTATATCCAAAGCA-TAGGCAGGTGTGGGGTTGAGCCTACATTGTTCTTCAGTGGAGGGCAAG----CTTCACTTCTGTAAGTAGATATATGAAATTGTTGGTGGAGAATCTCCGTTCCACATCTGTTGCTCCTTGCCTGCCTCCTAACCTGAAATTCTTCCTTT----CAATTCCTTATAATAAT------TCTGTGGAGTGCTTGAAGACATGGCATATAGAGAAGAGGACAAATAGAAAGAAGCCATCATACATGTAGTTAAACCATCTCACTACCAAGCACAGGAGGGCCGGGGGTCGGGGGGAGCACAGACT---CAACAGCAAGAGAAAGTGAAATGAGAAAACATGTTTCGATTCGTT-----------AGAAAATGATTTCCTATAGTACCCACGAGGTAGCAAAACATT---TAGTCTCTTCTACAAGATAAATTGGAAACGAGAAA-GAAGTATTAAATATAAAATTGTAGTAAAATCTGACTTTGGTCCCAAATGGATACTTGAATCCT----ACTTATTTAGATATGAAAAAAAGATATTTAGATG-----ATGAATTAAAAAGCTAGCTGAAGAACCTTTAGGCTCCAGAAGAGCCAAGCTCAGCACTGCAATCTCCCAACACCTAGACAAGTCTTTATTTCAATAGACTACACTGTCTCATCCTCCCTCTAGCAAAGACT-GAACTCATACA-TCTTTCTCTCCTTCTAGAAAGTGCTTCACTGAGGCACCCATCAGGACTGAAGTGCTATCTTGACACCAGCTGGCACAGGCATGTGCTTC-ATTCTTTGGAAG---------GAACTTTGGGAAAGAGACGCGCCTTATCCTAGAGGCG----CTACAGGAGGAGAACCGTGAGAAACCTTTTCCTACGA---GAATAAGATGGTGACATTTG-----AAGAAGC-CTCCTAAAACAGCTTTAACTCAAGTCCAAGAGTATTTCCAAGCCAATTTGCATTTCCCCAGATTCTTGCTCTTTATAAACTAAAGTGTTTACTGGTTGGATTCCATTTCAAAGTTAAAATTCCAACATGGTGAAGCTGAGATGGAGATCTGAGCTGAGTCTCACTTTAGGATGACCCAAATTCCCTATTCATGCCAAA-----------TTCTGAGTGTGTGCACTGACGATGTTTTCTAATTGCCTTTGAGTTTTCAACCTCATGAAACATCATATTTAACTATTCTACTCCCCACGGTCTAAACGGTTGTCTAATCAAACAGTGCTGCCTAGCATAATAACTTCTCTCAGACATCT-TAAGACATAGATTTGGGCCAAACAAAGTGCAATTGTGTTAAAGTTGTTTAATAGCCTGCCAATGTGAAGCCCACCGATACGAGTAGGGCATAGAAGAAGGAGTGGGGTGGGAGAGCTAGACACAGGCATCTCTATGTCAATAGCAACACTTTCATATTCAGAAACAAAGATCAAGAACATCTTTGTTT---AACATACTTGGGGTAAGCGAGCAAAGTGTGACCCAAAAATACAGACTCTAACATCAGCACTCCCCAGGGAGAGAAGACTG--CTCTCTGAAAGTGATAGGCAGATGGAGGCCGGTCACTATGGAGTCTGTTAGGTGCC-----AGCTGCAAGTCTGGGG-TTCGCTAACATTTTGGG--GTCTGTGAGGCAGGTGACAGTATACTCTCTGTCTCTTAAGAGTACAAGAGTTTTT----TGGGTGTAGCTGG--AGTCATCACAT-ACTGAAA-TGGTTGCCCAGCCTCAGGAAGTTAAATCTTCAGTGGTCTGGAAAAAAAGAAAGGGATGTTGGTTGGGAGTAGGAGGATATAGAACTGTCTGGCAAAAAAATGGCCTGAAGCTGAGGAAGGGAGTTTTCAACAATGAGCCATTGATGATAAAGGCTTTCAGTGATGATGCAAAAAAGATATTAATGGAAACCATGAGTTGG-----AGGTGGGGAG------------GTCAAGCAGCCCCAATACAAACAAAGCTCTGGCTTTTT-GTCTTTCAGCTTTTTTGGAAACCTGTACTTC-CGACTCTTTTCTTGTATCTGCAAATCAGCTGAATTTCAC------AGATTTCTTCCTTCCCC-----------ATTAAGTTC--AGCAGAGGGATAATTTCAACTAAAAGCACAACCTTTTGTTTGGTAAAAGTCACATACTTAATTTTGGTGATACCAAGTTCTAAGATATTGCTGAATAGTGTTTCAAGGGTTAAGAATGAAAAACAAACATATACCCTGGGGCTTTGGAGACATAATCAGCCACTGTCAAATTGTGCTTTCATTTTAAGAGAAATGT s bosTau2.chr20 23933117 2694 + 42952723 taattattGGGAATGCTAATAATGAATGAGCATTATATGGCATGGGATGCATTCATCATTTTCCAGATGTGTACTGAAGGGTAGAAGGTATTTCTGGCATCTGGATCATCAAGGCCAGTGAGCTTCTTGCTTCCAAAAGTCTGTCACATCATGTGAACATCTGTGCCTGGCATATCCAGTCCCTTAGTGACTATTAACTGAACTGAAAAGCACAGTTTTGCTATCCAGTAAACCTCTGGTTTGAAGTAAGTTTTTTATTATGAAAATTTGTTTCCCTGACCCTCCAGTGTTACTTTGATGTGTTCTGGTTTGAGATTCAGAGACCTGACTGCTATCCAGATTTC-AAGCTGACAATCTTTGAACCATCTAGTATGTCCATTTAGAAATGT-GAGCTTTCAAATCAGTAAGATTTTGCCTTAGTTGTTTGAACTTGTAACGTATTCCATAGCAAAGAGAAGA-----------AGCCCCATCATGTCTGAAGCCCTGGGCAGCTAGAAGTTATAGCTTACATTATTCTCT--TAGGAGGCAGAATTTCTTTATATCCGTGTATACACATGAAAAAT-----GTGGAAAAT-GACATTTCATGTCATTTTTTCCTTGCATTTTCCCCAAC---------TTCCTTTGGCCCCTGTTTTTGTAATTACAGATGCTTTGTAAAGTGTTTAGAGACACTATTTATAGGGAAAGTGTCATATAAAATGAAGTTGCCATCCATGTGGCTCTACTATTGCAATGCCAAACAT--------TTTGAGCCTGAGGAAG-ACAGATTTTTCAGCAGCAAATGAAAATGAAATGAACAAAATGCTTTTGATTCATTCCAGTAACATTGGCAAGTGATCTCCTATAGCACC-ATGAGGTGGGAAAACCTTGCTTAGTTTCCTCTACAACATGGATCAGAAATGTGAAAAGAAAGATTAGGTCTGAAACGGTAGTAACTTCTgaatatggaactaaaaggaaacttgaattcatttaaccttttcatagatgagaaaac-atacct-gatgcctacgtaggtcaaaggttttgctgaaaatcattcaggcagtggaagagtcaagctcagaatcctggtctctgagttcccagCTAAGGATTTGTTTTAGTAGATTATATTACCTTAGTCGACCTGCAGTAAGGGTTTGAGGTCAAACAGCCTCTCTCTTCCACTAAGATATGCTTCACAGCAGCA----TCAGAATTTGGGGACCATCTTGACATGAACCTTAACAGACATAGGCTTCCAATCTTTGTAAGTTGTATAGAGGGCACTGGGAAA-AGAAATGCC--ATCCTGCTGGCTAAACCCACATGATAGAAAAAATGAGGAAGAATTTCATTAAAAATGAAAAATATGAAGACATTGGGTTGTAAGAAGCACTGATATCAAAGCTTTAACTTATGCTCTTAAACACTGCCAAGCAAATTTTTTATGTTCTCAATTCTACCGCTTCACAGACTGAAATGTTCACTAGTTGGATTCCATTTCAAAGTTAAAATTCCAATTCAGTGAAGTTGCGATGAAGATCTGAGTTGACTCTTGTTGTTGTATGACCTAAGTTTTCTATCCATGCCAACTTTTTCATTTTTTCTGTGT-TGTGCATTAATGATGGCTTCTTTTCCCCTTGAAGTTT--AACTCCATAAAATATCCTCTATAACTGTTCTACTTGTCACAGTCCAAACAATTCTCCAATCAAATAGTGCTGCTTAGCACAATACCTCCTCTCAGAAAGCCAAAAAAAATAGATATGGGGCAAACAAAGTGCAGCTGTGTTGAAGCTGTTTAATAGCCCGCCAATGTACAGCCCGCCAATGAGGGGGCGG-GTAGTGGATGGGGGCGGGTTGTAGAGACCCACAGAGACATC-------CAAAAAGAGCAATCATTTTTTCAGAAACAAAATTAAGGAGTGCCTTTTTTTCAAAAGATACTTGAGATAAGAATGTAAATGGTGATCTAATGATACAGGCCCCAGCAGTAGGGCTGCCCAGGGAGAAAAGCCTGTCTTATCAGGAAATGTTAAGCTGTTG-----------CCACGGAGACAGTTAGCTGCCTAGGGAGAAGCACTCTAGGAGTTTCTGTGACTTTCTGAGGTGTCCATTAGCTGGATGAGGGTGTCTTACCAGCCCTATAAGACCCAAGGAGTCAATCCCATTGGCTTAGCCAGCAAGTCTTAACATCCCTGAAACTGGCTTCACACCATCAGGAAGTTAATTCTTTAGTGGTC--AAGAAAAAGAAAGGGATCTTGTTTGGGGATAGGGGAGTCTGAAGCTGGCTGGT--GTAGATGGCCTGAAGCTAAGGAAGAGAGTGTTTTACAATAAGCCATTGATGATACAGAATGTCAG-ATTGAGGCAGAGATGATATGAATGAAAACCATGGATGGGTTGCAAGACAGAGCGGAATGGGATTATGTCAAGTTCCCCCAATACAAATAGTGTTCTGACTTTTTCATCTTTAGGCTTCTGTGGAAATGTGTGTTTCTCGATTC-------ACATGGGCAGATCAGTCCAATGTCACAGAAAGAGATGTGTTCTCTCTCCTACGGAGTTCTATGAAGCTCTAGATGGAGGGGTGCTTTGAAGTCAAACTGTAACCTCCCTTTCGATAAGACTCGCCTGCTAAA----AATGACA-AAAGGTATAAAATATTGTTGAATAATGTATCAACGGTAAAAATTTAA---------------------TTCTTGAGGTTTAATTAGTCACT---------TGTATCCTATTTTAAAGAAACGT a score=3861 s mm7.chr15_random 1136353 115 + 7075849 tagcttttctgatactgaattcccttattagtaaaattgg--gatcttgacttccctgtgaagatcatctcagaaaatgcatgtgaggATTCATACTTTTTGATTTCCGAAGAAGAG s bosTau2.chr20 23942343 114 + 42952723 tagcctctctgatgctcaacttcctcttaagtaaagcaagaagaccctgttcttcttgtgagggtcaagtcagagagtatatatgaGCATACAGAATTTTTAAAT---GAGGAAAAG a score=8764 s mm7.chr15_random 1136502 391 + 7075849 TTTCGAGGAAG-----TAAAGGGACACATTTCTTTGATAACGGGAGAAAGGAAGGAAAGGCGGGAAGGAGGGAGATGCAGAGGGGATTAGGAGGTGTTTTCAATACTGGCGTTGGAATTGTTTGACACTTTGGGGAATCACTTGATTGCTTGTTGCAA-GTTGAATCCAATTCCAATGAGAAAGAATCCCAATATATAGTAACTAATTTCGTATTTTGTTTATTCTCCCGCCACTCTCCT--ACCCCCAGGGGTCACTGGCGTCTGCTCCACCACACTTAAGAAGGATGGCCTTGAATTTTACAAGCTCCCCTTCTTGGAGGAATACCTAATAAAGAGGAGAAA--AACCAGGACA-----TTTGGATAACTCAAAAGCTGGGCATCCAGCTGCTAAATAACTGAG s bosTau2.chr20 23942479 375 + 42952723 TTAAGAAGAAGATGAAGGAAGAGAGACA-------GACAGAAAAGCAAAagggggagaggagaaggggagggggaggggaaggCAGAAAGAAAGTGCTTTGAAGACTGGCAAT----TTGTTTTGCACATATGGGAAATATTTGTTTACTGGCTATAATGATGAATC-AATTTCAGTGA-AAATAATCATAAAGAATAGCTAACAGTTTTCTCTTT-----------------CTCTCCTTCATCCCCAGTAGTTTCCATTATCTGCCCCACCATTTATAAGGAGGTAAAATCCCAGGGTTACAGCATCACCTTCTTGGGGCAAT-CCTAATGAAGAGGAAAAAGAAAACAGGATGGAGGTTTTGGATAATTCAAAAGCTGAACAATAAGCTCCTGAATAATTGAG a score=5432 s mm7.chr15_random 1136990 229 + 7075849 ATGCAAATGCC-CAGTGCCCAGGCCAGCGTGCTCTGCGCGTTGTACAGCCTATTCTGTGTATTATGCTC--TGTGTTTGTTTCATCCATATTTAAAGATAAACCTGCCGTGTTTCCTAACGACAGGTGGGAAACG-AGGCTGCCTGTCTGCA-ACATCACTCACTTGAAGCAGAATTAAGAGAAATAATTCCTCTACAGTTTCTGGAGAAAGTGTCGACGGGATGATTTTTAGG s bosTau2.chr20 23942983 224 + 42952723 ACCCAAATTCCATCAAGCCCAGAACAGTCCGATCTGCATTTGGTG-AGCAGGCTCTGTG---TGTGCTCATCATGTATACATCATACATATTTACAA--TAGTGTGCCATGCTTTCTAATGACTGCAGGGAAACTCAGGCTATTTGTCTGCATACATTGCT--ATGTATGCAGAATTAGGA-AAATATTTCCACT-TGATTTCCTGAAAAAGTGTTGGTGGAATGATTCTTAGG a score=14930 s mm7.chr15_random 1137219 425 + 7075849 TTCTGGGTTTAGAAA-TAAACAATAGTGCAATAATTGAGTGAAATCTATTTAAGTTTTAATGGGGTTTGTTTGCCTTGCCACTTTGAATGCTGAATAAGCA--GGCGTTTGGACTCCCATAAGAATCACTGAAGGAAAAAAAAAAGGCTTCCA-TTTTTGTGTGGTTCCTGGATGCTACTGTGGTAGAATAAACAACCCAATCAATCAATGCTGCTGGTATAAAAACTGCAATTTCTTTTACTCTCCAGC-TCACCCACCTGCCAGGGGGCTCATTAGCACAAGGTAGATAGCGATGCACTT---GAGGAGGGCATGCCAAAGGAGAGAAGGAAATGCTTTCTGAGAATAAATAGGGGTCTGCAGCCATAGCATGCTCTCCACGTTCCTGGCCTTT-TCCTCCATCTTCTATGGAGATGAGAAGGTTTTCCAAG s bosTau2.chr20 23943774 415 + 42952723 ttatagatttagaaaataaatgaatat---ataattCAGTGAAATTTATTTAGATTTTCCTGGAGTTGATTT----TGCCTTCTTGAATTCTGAATAAAAATGGGTATTTAAACTCCCATAAGAATCA-----GTAAAAAAAAAAAGCTCCCAGTTCTTGTATTCTTC-TGAATACTACCGAGATGCAATAAATAATCCTATCAGACAATGCTTGTGCTATGAAGCCTGTGATTCCTTTTACTCTGCAGCAGAAACTACTTGTCAGGGGGCTCATTAGTACAGGGCAGATGCCGATACCCTTTCAGAAGAGTGTGGGC----ACTGAGAAATAAATGCTTTCTTAGAGTAAAT--GGGCCAGCAGCCTCTGCTACATTTCCACATCTTTGGCCTTTCTCCTCAGTCTGGGAATGAAATGAGGTGTTTTTCCCAG a score=3952 s mm7.chr15_random 1143051 333 + 7075849 TTTGTGGTGGTGCAAAGTTTTGATCCCTTTGCCACAAAAATAAAAGAAGACCAGCATCTGAATGCATGGGGAGGATGTC--TGCTCTGAGGTCTTAGCCATGCTCTGTCCCGATATACTTCTGAGAT-GGAATCATACATTGCACTCTGGAATTGTCAAGTG-----TATTAAACCT----------AAAGAGTCCACGATCCAAAGCACAAACTGAGTCTT----------TGAAGA-GAAAACTATTGTGTCCAGTCTTCAAAATAAGTGAAGGTTATAGCACTCACTTTTCTGTGAC-----------CTGTCACTTGAAG--GTCCTGCCA----CAGAACAGGACTAGATAAAAAACCAAGGGAAGGTTTCAGC s bosTau2.chr20 23944731 367 + 42952723 TTTGCTGTGGAATGAAGTCCTTGGGGCTGTGACG-ATAACTAAATGGGGATTGAAATCCTAATGTCCGGGGCAGACACCCCTGCTTT-AGGTCTTGACCCTGCTGTGTCCATAAATATTTCTGAGATCAGAATCAGGCTCTGT-CCATGAATTAGCCTATAGAGAGCTACTAAGCTTTCAGAATATAAAAGCATCAATGA-CCAACACACACACTTTCTCTCAATGTGAGAATGAAAATGAGGACCTTCAGATTTAGTCTTCAAAACAGCTCAATGCT----CATTCACTCTGTTGTTACCCTCACGTGCTCTTTCTTTTGAAATTATCTCACCAAATGCAGGGCAGG----GAGGGAGCATCAAAGGGAGACTTCGGC a score=6259 s mm7.chr15_random 1144995 344 + 7075849 AGCAGAGGATGACCATCAGCAAG-----AGGATGACT-ATCAACAGA--GACCTTTCCTC--AGGGCTCAGAATTTCAACAAATGACTTAAGATACCATGAAACCATTCCTTTAGTA-CTAAATTACCAAATAGAGGTCAGGTTATGTTTTTAAATGAG--GTTCATTTATCATGAAATAATTTCTCACAAAAAATAAAAATATTTTCAA----AAGAGGTTTGTAATTTACAAAAGAGTATTTCATTT-TGAA-TGTGTAGTAAGCATCATTTCAGAACTGTCTTC----CTGCATCTTCAATC---AGGTCTCTAAGgatagatactgtgtacacattcaccaaattatttcc-ctttcttcactgaca s bosTau2.chr20 23945098 331 + 42952723 AGCACAAGAGGACCAAGGACAAGCTTGAAGGAGTATTGATCAAAAGGCTGAACATTCATCCTAGGACTCAGATTCTAAACAA-TGGCTT---------------------CTTGGTATCTAAATTACCAATTTTAGATAA----ATTCTTTTAAAAAAAAAGTTCATTCAT-ACAAAATCATTTTTCTTAAAA-------------TCAATGATAAGAAGCTTGTTGTTTATAGACGAATGTTTCCTCTCTGAACTATATAGTAAGCACCACTTCAGGACTTTCTTCCACTCTGTTGCTTGAATCACGAAGTCTCCtgtggcagagactgggtgatctttcactcaaccatttccattttcctcccaggca a score=23563 s mm7.chr15_random 1146146 1240 + 7075849 GAGTGCTCAGTAGCCCTCTGTTGGTTCCCTTC--ACACGAGCATTTCCTTCCACACATAATC--CAATCTTCAAAAGCATGCTCTTAGTTTAAAAATTGGTTTTAAGACATGAAGAGCG-------TTTCCATGTGGTCATCAAATC-AGTAAGTAAGTAAGTTAGGA-AGGGTGCAT-CCTGGGACCACACATGTGCTTCTCATTA--AGTTGAGCTTCGA-TTGCTTTTTCTTTCCTTTTCTTTTCCTGATTTGCTTAACAGAACATTTC-CTGTGATTCTATCCTAATGGTCTCTTGATGGTGTTTGTTATATGTATTCACGTGTACATTTTTGGAGGCCAAGGGGTTTCTAAGCTTAATTAGTTTGAGCAGCACAGAAATCTAATCCAGTATC-TCATGG-----------ATTCTTCATCTACTCCGTCTTCATCTACCTTTCAGTTGCTAATGACTTGATGCCAGTTTTCTTTGAGCCTTTTCCATAGGTACAGGATCAGAAAGAAACCACCATCACTGGCAATCCAGGCTTCC-----TTAAACTGCAGGGAACCA-TACAATATACTTCAAGTTGAGTCTGTCAGTGAGTAGCCTGAATATCTTAAACACATATCACATCATAATTAAGATTTGCTTTATTGTACAAATAGATGACAGAGTTAAGGTAGTATCCAAACGTGAAAAAGTACCACGTAGC--AAGCCTGA------TTTTCTCCTATG--TTCTAGAAACTTACTGGCCTTCTGTAAAGGTTGCCACTCACCATTATCAACTTATTATAAATCATTTCAAAGA--------ATATATTCTTCCTTatgtatatgttcatttttctatacaaataagataatatgctatgaattctctttagtgactttta----gaaacttaaca-----catctataagatctttccatataaggacataaaaatcttcctttgtctcctgtataatattctattatatgactgcatcatg------aaccagtttcttgttaatggatatttaggctgcttctcatctcttaggcttacaaCACTTCACCTAG--TCTTTACCCATCAAGGTC---TTACATACATAAGAGTG------TGTCTATTAAG---CAAGGAGGAGAAGACAGGGGtattttaaact----aaataaaaat---tataattttataataCTGTCTTTTGCAATGACCAATATGCAGACTTCTCCACCGGAAAGGGATTTCCTCCAAACAATTCTATTGTTGGGACGACCCAACAACTTATTTTGCCTCTTTGGTATTTGCTGAAGGGTTAAGGAGATACAGTAGC s bosTau2.chr20 23945470 1235 + 42952723 GAGCACTCCATAGCATTCTGTCTCTTTCCTTTCAAAATTAATATTTCCTTCACTGCAGAATCATTGTTTCTAAAAAATGTGCTTTTATTTTTTAAGTTGGTTTTAAAGCAAAAAAAAAAAAAAAAATTCTGATGTGGTCATCAAATTTGGTAATTAATTGAGTGAAGAGATTGTGATTACCAGTGGCCAAGCATATGCTTCTTATTATCAGTTTAGCTGAAAATGGCTTTTTCTTTCCTTTTCTTT-CCTGATTT----AACAGAATATTTTTCCACGAGCCTAGTTTAATGGGCTCCTAGTGATGTTC----TAAGTGTTCGCTTGTATAGTATTGGAGAGCAATGGGTTTATAAGCTTAATGAGGTTGATGATTATAGAAATTCAAACCAGAATCATTTTGGTAACATATGCAATTCTTTTTTAAC-----CTTAATGTATTTGTCAGTATCTAATGCATCAATATCATTTGACTTTTAGCCTTTCACACAGGCA------AACAAAATAACTACATT---------TTTAGGTTCCCAACAGTGAAGTTTCAAGGAAGCATTATGACGTACTTAAAATTGACTTTATA---------------------------------------AATTAA-------TTTATTGTTTGAGTGGATAATGTAATGCGTACTATAGCCAAACAACATAAAGGATCACCTAGTGAAAAATTGAGTTCTTTTCTCTCCCTTGCCTTCTAGAAACTCAGT----TTCTCTGAAAACTGCCACT----ATTACCCAtttcttctatatcttttcaaaagtattctatgtatatttaaacaaacatttatattta-ttttccaaaaaaatgtaatattatact-taaatactgttttggaacctttcttttttaacttaaccattatcatccagaagttctttccataccaatacatatacaactt-ttccactttctgtacagtattccattctaggggtgtgccatgttggttaaccag-ttcctatgaatggacatttatgtggtttccaatacattgctattataatattacaatgggtatattcacccaataatgtcactttgcatgtatgagagtgcccatctgttaactaaataccaaggggcgggaGATATGAGGATTTTTATTCTGAGACATACACATACACATGCTTATATAGCCACGTC-TTTAAAATGACCAGTGT-TGGACTCTCCCACTTTGGAGGAA-----ACCAAACAATTATCATGATGAAA-GAGCCAGCAGTTTGCTTGGCCTTTCTGGGCCTAGCTGTAGGGTTAAGTAGATACAAAAGC a score=12824 s mm7.chr15_random 1200641 640 + 7075849 TTTCTAGGAAAGACACTGAGTACTAATTGTTGATTCAAAAAT--ATTTAAGTTTTTTTTATCATATTTTGTGTATAGGTTCTTACTA--CAGATAAACAGAT-----TAGGGCATAAGAA-AATGTACATACAGTTTTGGG-AGAATCATTTATAACTCATACG-GAAATGCTGGTTCCTGATGGATTTAAT----GGGAAAGGCTGATTGATTTGATAGAGGATTGAAATGATTACCCTT---AAATAATAGCATACAAGAGGAATGAGCAAACCAAGAGACATTAACA-AGGAAAAGGTTCCCTAAGTGAA-----------GTATACATGATGATGTTGGACGAGCTAAGAAACAGGTTTTCAGAACTGTTTGAATAGACAGATGGAGAGAGA----CATAGAGACCTGCCTGGACAAATCCACACAGCTTGGAAAGAAAGGTCTGTTAAAATCATTGATTGAGTGGTAGTGGTTGTGGGCGGT-------------ATCGTTAACACCAAACAGCTTAGTTGTCTGTTTATATAGTAGAATATTAGGCTAAAGGGGCTCTAAACTG-CCCTGTGACCTGTTGCTTCAAGTTTT--GTCTCCTTGGAATGTAAGAAAATAAACA----CATCCTTGGAATAGAGACTAGAG--TGGGCACTGGGCTAAAG--------ACCCaa--gttttatttatttatttt s bosTau2.chr20 23383603 669 + 42952723 TTTAGAAGAAAGACACTGAGT-----CTGTCGGTGGTATGTTGAATTTAAAGCACCTTTAGGATGTCTGG-GTAGAGATGTTCAGTAGACACACGAGTAGATAACTTTGGTGCTTTCGAAGAAAGAAAGCACAGTTTTGGGGAGAAGTATTTATGGTTCACACTTGAAATGTTGGTTGCTGATTAGTTTGATCACAGAAAAGGGC-----------ATAAAGGTCAGAGGAGATGAGCCCTGGGAAACCAGAGCATTTCAGGG--ATGAGCAAGTGAAAAGAAACAAACAGAAGAGTGAGTTCATCAAGGAAATAGAATTTACCATATATTGAATTATCTTCAGAAAGTCAGATAACAGATTTTGAGATCCATTTTAATAGACGGATGAAGAGAGAGCTTCAAATAG--------GGACAAAACCATACACATT----AAAGTGGCCTTTTAAA-TTATTGATT------TAGGATTTGTCTGGGTTTTTTTTTTTTCTGGTTGTTAACATCAGACAGCATTGTTTTCTGTTTATATTGTAAAATGGTCTGCTAAAGGGACTTTAAACTGCCCCTTTGATCTTTTTTCTCAAGTTTTAAATCTTCTTGGAATGTAAGAACATAAACAAATTCATTCTTTGGATTGGATAAAGAGGCTGGACACTTTGCTAGAGGGGCCAAAACCCACCTCTTTTATTTAATTGTATT a score=40076 s mm7.chr15_random 1203598 1268 + 7075849 TGAAAGTAGTATATACAAAATCTTAGAAAAGACAGAAGATTATGAAGAAAGTAC---------TCCCACTACC-ATAGGTTATTCCAGATGTGAAATTAAAATTAATA-ACATTGATGTTTAAGAAAATTGCTGTATGTATTACCTAAGCATATAAAATGCCA------ATATCCTGTAAAAGTATTACATACaatatatttaatatcatattatatataaCATGTATGTAACAGTTTTGTTTCATGTGTGTTCTTGTTAGGGGAGAACACTTATATGTCAAGTTTGAAGAGGTTGAAGAGGAAGAAAAGATAAATATGAAAGGGCCATAAAATAAAAGACCCTTCCTGAAGCTAGTTATTTGCCTTAAT--TTATAAGTGA-----TGACCACTCAGACTGTAGTCAGCTTCTGTTATTTATGCCTGTGGAGGAGAGCAGGAAGGTGATTCAACTCAATGGATATTCCAGA-AGTGCACAGAGTTGGCTTCGGAATGTGTCTTTGTTCTTACATTTGAATATAGATATATGTGATCTGGGAGTTCACTTCA-----AACAAATTATTGAAGCCCATACATGTGAGAGCTAGTCTCAGGAGGAGCAAGGGGCTCCATCTGTTCTTCC--TTTGCTACTGGGAATAAACTAAT--CCTGTCTTACAGACACAGACTCCCAGTTCAGGCAGAATTGCTCCACCCTGAAAGCTTCTACGAGCTCAGGATTGGAGAAGCG--TTTTTTGCCAGGTCAGGATCATGTGAGGAGTAATACACAGAGCTTCCT----------GCAGTGCAGATGCC-ACCAGAAGTGAAACCCTAATGACTGCATTTGGCATTTATCTGCCTTCTCGAATATAGTGAAACC-TTCTTAGTGTGAAACACAAAGACATGGGGAAACGTGGGCTTTGAATT-AACTAGCTTTCCATTATCTGATTTCTATTATAGAGCAATCAGGCTGC-TGGTTGCCTAGAGAATAGCAGTTGCTTTGAATTATGTATTATTTTTGAATAAAATGATATCAGCTTAATGGCATTTCACTTTGATTCATTTTTTGAAGAATTAAAGAATACAAACCCTTGAAGGAACCTGACCAACATGTTTGTATATAATAGAGTCTGTAATATTTGCCCACAGCCTAGGGATGGGGCAGTTTACCCTGCAGAAAGCCAGGT----------TTTAC---------------AAGGTTG---------------TTTTCTGATCTTTCAGGATGTG-------TGATAAAGAACCTGGGAGTGGATAGAAGATGCTGATATTT-AGCATAAATCTGTTGATGTAGTACTGGCATG---CTTTCTTTAGCGTTA--TTTTTTCTTGGTC s bosTau2.chr20 23387318 1287 + 42952723 TAAAAGTAGTATA-----------ATAATATAGAAGGGATCACTGAGAAGGTATCATATCTTATCATATTACCCATAGACTATACCAAATATGACATTTACATGAATACATTTTGATGTCCAA-AAAATTGCTATATGTGCTA-----ATATATAATATGACATGTAACATATAAAATGAAAGGATTAC------------CACTTCCATTTCATATA-------------AAAGTTTT--------TGTGTTCTTATTAGAAAAGAATATTGTTTTCTTAAATCCAAAGAGATTGAAGAGAGATAAA---TGGATATAATGGGGCCATGAAGTAATAGGCCCTTCATGAATCTAGCTGTTTGTCTTATTAAGTGTAAGGGACATGCTGACTCTTCACACTGCAGTTACCCCATGTTATTTGTACATGTGAAGGAGAGCAGAAAGGCCATTCAAATGAATGGATATTCCAGGGAGTCCTCAGAATTGGCTTTGGAATGTGTGTTTGTTCTCGTATTTGAATACAGATATAGCTAGTCTGGGAATTTACTCCGAATTTAATGAATTAATGAAG-CTGTACCTGTGAACGCTTGTCTCTGAAGGAGCTGAAGAACTCCTCTGTTCTTCCAATTTG-TACTGGGAATAGACTAATGATCTGTCTTAT-------TAGTCCCAGCTCGGGCCGAATCACACCTCTTTAAATGTTTTCTAGAAAT--AGACAAGTCAAGCGGTCTCTTTGCCCAATCAGGAACTTAAGGAAAATAGTACACAGAGGGAACTTGAGCGATAGGCAGTTAAAATGCCAACTGAAAATGAAA---GAAAGACTATATTTGGCATTTATCTGCTTTCTAAAATACAGTGAAACCTTTTTTAATATGAAGCACAAGGGAATGGGAAAAAATGGGCTCTGAGTTAAACTAGCTTTCCATTATCTGATTTTTATTAAAGAGCAATCAGGCTGCTTGGTTGGCTAGGAAATAGCAGTTGCTTTGAATTATGTATTA-TTTTGAGTAAAGCAATATCAGCTTAATGAAA-TTCACT--------TTCTTGGGAAGATTAAACAATGTAAATTCTAGATGGATCCTGATCAGTATGTTTGTATTTAGTAAAATGTGTCTCTTCTG-CCATTGCCAAATGATATGACAGTATACTC------AACCTAGGTTCATTGAGCATTTGCTCACTGGGAACAGAAAAGGGTGTGTGTGCACTGTGTATTTCCCGGCCTCCTGAGGTATATTCATATTTGTAGGGAACCCAGGAGTAAATAGAGGATGATGGAGTTTCAGTGTCGGTTTGCCAGCACAGCAATTACATGGTTCTTTTTCTAGTACTGCCTTTTTCCCGGGTC a score=3792 s mm7.chr15_random 1207843 77 + 7075849 TGTCTGCCTTAGCAAGTCTTGAAGTGTTTTACAAAAGGAAGATGATAGGAACCAGGGCTGATTCTGTTATACTGATT s bosTau2.chr20 23389318 71 + 42952723 TATCTACCTTATCAAATCTTAAAATGTTTTACATAAGGAAAATGAAAGGAACAAG------TTTAGTAGTACTGATT a score=4082 s mm7.chr15_random 1209982 330 + 7075849 TGCCTTAGTAATTATTTTGAACTCTGAATTTTATCCCAGGTCTACCTACTGAT-CTTACTTCCCTGAGTCCTGCTGTCTATCTGTCTGTCTGTGACCACACTCAGAGGGAGAGGCTGAGCAGTATGCGTGTGTTTCCTCTGTCCTATCCAAAACCAAACAGGAGCTCTTTAAATTCACAGTCAGTTCACTGGTGATGGAAAG--------AAAGCACAGTGTG--------------------ACACAGTACAGACCTC-GCAGATGTGCCCAGG--------------------GCAGGCTAGGAGATGATGTGCCT-TGGTAGGAGACGA-----TGTCACTGATCTCACTGCGACTTACTCTCTGACGCTGGCGGGATCTCTC s bosTau2.chr20 23391228 361 + 42952723 tgcttcagtggt-agtttgagttctggactaatttcccagtccacctactcctatttacttttcaaaatcctcaaatctgggt-----tttataactgcattcaaagagagagactgagtggaatg----tgatccctctatttcacccagcacca----gGAAATTTTT----------TTTATTAAACAATGATGGAAAGCACTGTATGAAATACAGTGTTTAAATAGTGTTTAAATAATTAAATAGTACAAATTGCAGCAGATGTGCCTAGGAGGAATTGTCTAACATCACCGCACATTTGCAGG-GACATTCATATTATAGGAAATAAATTAATCTCTTTGGTCCTAGTGCAAGTCCCTCTCCTATGCTGGTGATAAGTTCC a score=25612 s mm7.chr15_random 1210352 894 + 7075849 CATGTTCCTGCAGATTTTCCATAGTACCCCATGTCTCTGCCTGAGGACTATGATCTAGCTGCCCTGTGTAAAAGTTAGAGCTGCACTTCCAGAATATGTTTGCAGCCTCCCTGC------------------TACAGCCTC------CCCGCAGAGTTCCTTTCCCCTCTCG---TTAGCCTCTCGTTCTCATGTTCCGAGCCTCCATCCTTTACTGTAgtcctcgtggacctggagaacagctggtcagtatcctctGCTTTCTTGATGATTATAAGGTCGATGCTCTGTCTTTTCTTGTGTAAGTGAACCAAACATTAAAAAAAAAGAAGAAGAAGAAGAAAAGAAACCTTTTCCTTGTGGATCAGTTTTTCTCGGTGCTTCCATT--ATCTTTGATATTTTTTTCTCAGACATTCTAAG--TTTTCAGTGACCACATTGGGCTGGGAAGGCCCCTGGGGCTGCAGGTGCTATGAGTGTGGGAAGTGCACACCATTT--ATTgcttagcacagcacatggcatatggtaggtgtttgctaaataA------------CTTGCTTTACTTTTTATCCTACTTGATTCTAGAATGTTCTTACCAAGTTTTGCATTAAATGTTCTAATCCCTCTCACTTTCTTTTGCTTTTATTTTTT---AATAGTTTC--AAAAATACTTTGGAATGTCACAACATAAGTATATTTACTTATAGATTTGATTAAAGAAGTGCACATTTGGTTTTGTCTGCTTATTTAAAATTTGACAGTGATTATCGGTTTTTACACGTAGCTAAAATAGCTGTG-TTTGAGTTCAGTGGAAGAAACTTAAATTTTCTCCAGATGCTAAAAATCTTGGTAATCT-AAACTCTGTTTAACATAATTTGCTCTGGTTGTTAAACTATTAATGAGTGTGAGCTA---------------TTGTACAATCCGCTGTGGTTTGAA s bosTau2.chr20 23391694 892 + 42952723 CATCTTCTTGC-------------------------CTACCTGAGAACTACGACTCAGCTCTCTTAAATGAAAATTagacttttaa---cagaagat-tttacaacctccctgaagagttcatttctgtttataaaaactcttattaccatcagctctttttttcccctttacttttagccta-cattctcatgcttagagcccacatcctttactctggtccttaaggaattggagaacagctggtcaacatcctgtgtttccttgaagattataaagttactgttctgtcttctcttgtctaagtgaaccaaactc------------agttgatattgttattttaacattttcttgtgagttgtattttctcaacacttctgttttacctttgatacgcttttctcaaccatttctagattctccaGTGAGCAAATTGGAGTACAGGGGCTCCTTGG--------TGCCATGTGATCAGGCAGAAcattatattccaaagggttagaacag----tggcacatagtaggtgtttggtgaacatgtatttgttaaTTTTGCTTTACCTTTTATTATATTTTATTTTAGTATATTCTTATTGGGACTTACTATCA-TAGCCTATTCCATGCCAGCTTCTCTTCCTTTTGTTTTTTGTTAATAGTTTTTTCTAATTAATTTGAAATTTTAGAACATAAATATGTTTTCTTTTAGATTCAATGAAAGAAGTACA-----GATTTTGTCTGCTTCTTTAAAACTTGA----GATGATCCTTTTTCAGACTTACTAAAAATAGCTATGTTTTGAGTTCAGTAGAGGAAGC--ACATTTACTGTGGATGCTTAAAATACTGGTAATCTAAAACTCTAATGAAT---ATTTGTTTTAGTTGTTATACTGTTAATGAGTATGATCTGTTTCCTGGGTCTATTTTGTAGAACACACTCTGCTTTGAA a score=5946 s mm7.chr15_random 1211969 254 + 7075849 CAGTACTCACAAGGAAATGCTT---------TCTGCTTCTGTTTCTAGGCCTCCAAAACCTGC-AAGCATTA-----TTTCTTTTTCATTAAGTAGAAACTTTTATTTTGTC--CTTTCCACAAAAGCTT-CTGTTTTACTTAGCAGCTATGTATTTAAACTGGC---GACATTTCATTGTGTAGACATGCTGACCATGAATGGCAAAGCCAGATAAAGAACC-------AGACACCAT-------AGGGACAAACGTCCTTAATTACTCTGTAAAA--CCAGACAAAGAG s bosTau2.chr20 23393721 284 + 42952723 CAGTAGTCTCAAGGAAATGTTTGTGTACTGTTTTACTTCTATTTATAATCCTTCAAAATAAGAGAAGTATTCGGTATTTCCCTTTTGATTAATTAGAAACTTTTTATTTTCCATCTCTACACAAGAGTTTGGTGTTTTATATAATTG----GCATTTAAGCAGATCTATATACTTCCTTGTATAGATGGGATTGCCATAAATGACAAACCCGGATGAAGACTCACCTAATAGATAACACAACCCTGAAGGAGAAACATACTGG---ACTCCATAAAATGTCAAAAAAAGAG a score=13315 s mm7.chr15_random 1268542 412 + 7075849 TATCTTTCTTCAGTCTAACATCTGATTTTTCACTCACTTCTTAAACCTGCTAAGTATAGCCAACATTTAATTGGGTGAGCTGCAATTTCCATTTCTCAAGGTCATACTTAGAATAGACATACTAATTAATACTTATTAGCACATTTAGACTTTTAATTTTCTAAGTACATTAAAAAATAAGTAACTGAATTCCCTCATGAATTCAGTTATACGGGCCTTAATTTCTGCAAGACAGAGAAACTCAGTGCTAGGCTCAATGTTAAGAAAGTTAG----GTAAATATGTCTCACATACAATTGTGAAATTCATTGCTATTTCATAAGGAATATAAACAACTATGCAAACATGTTAAATTCAGCTTGCCTTTACTGTGAGGTTATTAACTTCTAGAAAAAAAAAACCTACATTTTTCTTT s bosTau2.chr20 36425150 394 + 42952723 TATTTTCTCTTTGTTCAAAATCTTATTCTTCACATATTT---ACAGCTGCTGAGTATAGCCAACATTTAATTGTGTGAGCTACAATTTTCATCTTTCAAGGTCATACTTATAATGGAAATACTAATTAATA---GTTAGCACTTATAGGCTTTTTATCATCGGAGTAC-TTTACTAACAATTAATTTAATT-GCTCAAGAA-----CCATGGGGACCCTAATTTCTGTAGGATAAAGGAAGGTTATATTAGGGTCTTTGGGAAGGAAATTAGACCAGAATATATGT-TGACATACGTTCACAGCATTAATCAAT-----GTAAGTAGGAGAAATAAAAGGAAAAACACATATAATTCAGCTTATCTTTATTATGAAGTTGTTGATTTCT---AAAAACAATGCCCCATTTTCCATT a score=12293 s mm7.chr15_random 1270605 905 + 7075849 ATGACAGTTGTTTTGGATGCTGATAGCACTGAGCCACCTTGGCTCTTAAATACGTTTCCTACTATTGTGTTGGAAAT-GGAACATGTTAGCCATTTGCTGTGAGTCAAAGGACGACATTTCACAGTACAGATTTCAGT---AGAGTGACTCAACATGGCTTACTTTCA-ATTAATATCATGCCTACAGAATTTGATTCA-TTGATGTACATGATTATTATAAACAGTATTGACACTAATAGTGA-----CATATCATTATAAACAAGTCTAA-TGGTAGACTACCATTAGACTTGTTTCTACCTTTGAATATATAATTGAAACATATTTCTGATCTGTCTCCATTGTTGATGATCATATATCATATCTTAAATGCATAGAAATGATTCTCCTGAATACTTTGGGTGTAGTGAACACTAAAATTAACTTGCTATACAGCTAACAATTGATCACACATCTCTACTCAAACAGCAGAGCA--CTGTCTGCCCCACCCACACTGAAAACCATTTTTTCTCTGGACACTTGGCCATGGAAAGCCATTGATAACGGCATCTTCTCTTGGA----AGGCTGGTATCTTCTTCCTGAATTTGAATTCAGTGAGTTGTACTGCAGTTAATTAGAGGAGGAAGACTTTTTCTCTTTCCT---------CCCTTCTTGCCTGTCTCTGTCTTTGTCTGCTTTGTTCATTCTTAT--CTCTTCTACAGTTCTCTTTCCTTTATAATAAATAATGCAGTAGACCTTAGTCATGCAGTGTTTAGTTTTGTCTGCATGGGATTGTTTCTGCCAGTATATAACATGGGGCTCTA-AGTTACCTTTCACCTTGAATTTCCATCTGCAATTCTGAGACTCTTTTT-ATGTTAGAGAAATATTTGATATGCCCTTCTCAAGTAGTACTTATGGACAAATGAGAAGTTATAGCTCA s bosTau2.chr20 36425779 875 + 42952723 ATAACGATTGTTTTGAGCACTGAGACCATAGTGGTACCTTTGCTATGATATAATTTTCACGTTATTCTGTTGTAGCTTGGAACTTC----CTATTTGCAATTAATTAAAACTAAACATTTAATAATAGAGACGCAGGCCAAAAAAGGACTCAATAAGGTTTGTCTCCATATTAATGTTGTGCCTACAAAATTTGATAAAGTTAGTGTGCTTGGGAA--------------AGCTCTAATTGTGAAGAAATGTATTATTATTTTTTTCTTTAACTTGTAAGTGATCCGAGTCATCATCTTTACCTTTGATTATATA-----------TTTCTGTTTTATCACAGTTAATAGAGCT-AGGTTTCATATGGTAAATGCACAGAAATGATTCACCTGAATATTTTAATTGGATTCACCTCAAAAATTAACTTGGCATATGAATAATATGAGA-AACATGCCTCTATTTAATTAGCAGAGAGACTTGTCTACCATTCTCATAGTAAAAGGC-TGTCTTCTTTGGGGATTTGGCTGCCTAAAGTCATTAAAGATGCCATCATTTCTTGAAACTCAGGTGAATGTGTTCATGGAAGATTCCAATTTAGTAAATTACAT------------AAGGAGTGtctctttctccctctcttttctccctccccctcttccctccctcctctctttcttccctccctcctcctTCTGGCTCTTTT----TTCTCTTCCCCCCTTTACAAAGCAACCGAGAGTATTTGGTAGATCAGCCTCCCAGTTCCAATA-ATGTAGTTATTTTGCAGGGGCTATAACAGGACCCTGTATAGATACCTTCAAAAATAATGTTCTA--CAGAATTTGTAGCTTCTTTCTAATGT----GAAAAGTTCAATGTGTCTTGCAAAATTCGTGCCCATG------TGAGAgactctggctca a score=2967 s mm7.chr15_random 1271900 116 + 7075849 TAACTGGTGACATAACTTATTAGTTATTTACATACCCATCTCACTTTATAATG--------TATGAAAT--ACAT------TCTCTGCCGCATGTACACA---AATATTTTTAACTAGTTGACTTTTAAAGAAAA s bosTau2.chr20 36428874 135 + 42952723 TAATTTGAGACATAATTTACCAAGTATTTAAATACTAACTTCACTTTAAAGTAAACAAGTCTATGAAATGAACATCTTTTATCTCTCACCCATCCACACAGTCAAAGCTTATAATCAGTTGGTGCTTTAATTAAA a score=11989 s mm7.chr15_random 1272196 315 + 7075849 AAAGTAATCTTGACTTTCTTCCCTTGACCTATTATTTCAACACCTCAGCCTATTTCTCTGTCCTTTTGATCACTCATCCATTTTTGCCAACCATT-ATGGCTTACAGTTACAATAAGAAAACAGTTAACAGGCTAATAATGAGTTTGCTAATTAATAGTTTCCAAATATCAATATAAGCATTCTCTTAATGTTGTTTAAACACCCTCCCCAAGGGCTTGCCTAGAA-AGGATTTATAGACCTATGTTCTAGTGTTTC-TGAAGAAAAGTTGTTTCTAGTGATGGTGCAGGCTCAATAAGTTATTGACAGAATCCTAAG s bosTau2.chr20 36429020 316 + 42952723 AGAATAATCATGGCCTTCTGCCGTTGATCTAGTTATCCAAAATTCTAGTTTACGTTTCAATCCTTGATATCATTGGGGTACTTTGGCCCAGAATTTAGGGCTTATTGTCTCAAACATGGGATGGGTA-CTTGCCGATAATGAGTTAACTAATGAATAGCTTC-AAAGATCAATGCTAGCATTCTCTTAATGTAGTTTAAAAGTTCCCCACAAGGGCTTGTCTAGGACAAGATTCACAGATAAATAATCTAGTCTTTCCTGGATAAAAGTTGTTTCTGGTGATGGCACAGGTTCAATAAATTATTGACATACACCTAAG a score=6754 s mm7.chr15_random 1273754 386 + 7075849 ACTTTATACACATTACTCTCAATCTCTGATTAATAG-TCACAGGTGCATGTCACATTTGTTTGTAACATTATGCTAAAATGTATCTATTGCTTAATTATTTTCCTCATGTAATGGGCTCAGATTTCTTTAACATTTCTTTCTGTCGTAATTACACAAAGCCA-------CATTGCTCTGACTACTAGCAGTGTAATCAAATCACCTG-TGCTAAAGCATAATTCGCCTTTAGACAGACTTTGTACTTTTAGAAGGTAAAATGACGTTACTAATATATTCATAACTAAGATACGTGGTCACATAGCAACGAAGCCTCATCTGC-TTGCAGAGAAAGTATTTACAAA--------------TGTCCCTGTTTAGAAAT----TTGACGTCTCATTATCCAAGTTTTATCCGTTTGA s bosTau2.chr20 36430617 403 + 42952723 ACTTTACACAAGTCACTCTAAGCCAGTGCATAATTGATCAAATAGCTATGAAACAGTTATCTCTATTCATGTGCCTATACATAAGTTATACTGACATTTGATTTTGTTTTAGTGCTCTTAGATAATTTTAACTTGCATTTCTTTGCAATTTTCACAAAGCAATCACCGACATTTTTCTATTTACTTTCAATGCAAACAGCCAACCTGGTTTTTAAGCATCATTCATTT----ACAGGCACCATAC-------AGTTAAAATTCTCTTAATCCTGTATTTTTAACTAAGACATTTGGCTCCATAACAATGAAACCTCTTCTGCTTTGCAGATAGAATATTTAAAAATTTCAGAAAAGAGGTGTTTCTGTTTTAACGTCTGCTTGACATTTCACTATGCATATTCGATTAAGTTGA a score=9516 s mm7.chr15_random 1275900 597 + 7075849 TTCCATCTC---AGGACTGACTGAAGACCAGAAGAATAGG-ATT--AGCTTTGGCTTCAGGACAGATTCTTTGGGGT-------ATTTGTTCGTGCTCCTTAAA-TGACATCTAGGATTTCACTCCTGTC-----------------------------AGGA-TCCAAAGGAAATTACAAATAGAACACGAAACTGGATTGTGTCTCTGTTGTTATGGTTG-TGCCACATCCCCTCTTCCCCA------TGCCTCTTTCATAACTGAAGAG---TTCACTTTAAATTGGGTCCTGGAGATTAAAATGCACT-AATATGGAACTTCAGCAATGAGACAACCTAACCGAACGGTGCTCTCTGGGGCCATGGAATTTATCAC--TCTCTACATGACAGCCGAATTTGCTCGCTCAGAAATTATCAAAA-------------------------CATAAATTACAAAGAACTCTTTCACAGTGACTTGTATCGATCTCATTTTGAAGTCCTGAAAGGTTTTTTTGGACATAAATACTAAAGATAAGAACCTTCTCAAAAATACAGGCCTTAAATGAGCTACAGTAACTTTTGGATAGCTTATAGTTTTGCAAATGTTGTGGTTATAATATCTGTACAAAGG-----------------TGATGCTGAAATGACATTCAATCAGTG---------TGAATATATTCTCA s bosTau2.chr20 36444244 678 + 42952723 TTCCATCTTTTTGAGAGTTACTAAAGGCCAGAGAACTCTGCATTGCAACTGTAGGGTCAGGATGGATCTCCTAGTTTTGTTATAATTTCCCCAAGATCCTGAAAATGGCATCTGAAGTCCTATTCCTGCCCCCCAAAATAAAGGCAAGCAATAGATAAGAGAACTACAAAAGAACTGATAAATAAAA---GAAAATGAAATAT-----TATTTGCATTGATGCTACCATGATTCCTCCTCTCCAAAATTGTGTCTTGATTATAAGCAAAGAAAATGTTATTTTAAATTGGATCCTGGAGGGTTAAGTAAAATCAGTAAGGAACTTCAGAGTGCATAGAGCTTAAATTTCCAATATTTTCTGGGACAGTGAAATTTATCACCATGTCTATCCTGGAGCAAAATTTGTTTGCTTAGGAATTGTAAaaaacaaaacaaaacgaaacaaaaAACCCATAAATTATGAAGATCCATTCTGCAGAGACCTATATTGATTTCATTTTCAAAAATTCAAAGATTCTTTGAGGCA-AAATA-TGAGGTTAAACGTTTTC---AAAATATAG-----ATATGAGCTATGGTGA-TGTTGGAAGTTATATAATTTTACAAGTGCT--------AATACTTCTATAAAGAAAGCCTTAAGATAATATTATCATTAAAAtgttagtcactcagttgtgtccaactgtatgtgttccca a score=9305 s mm7.chr15_random 1276497 316 + 7075849 GTCACTCGGCTT---CCTGGGTGCTTGTTATTCAGCAAAGCTCCAGATGTAGTGACCTTGATTTAACCCCAGTGCCCACAGCTCAGCATTTACGCA---GGACTGTTAGTTAGTCTTATTTGTAAGGATGACCCAGCAC---CTTTGTGATTCAGAGATCATTATAGGGCAAAATGATT--CAGCTATAAAGC----CTTTTCTCTGAGGTCTAACCTCATCATAACACATATTTCCAAGTAAATGTTGATGACACACGGGGAAAAGAGAGGTCTAAAAGGGAGAG-AGGGGAGGAGGAAGTGAGCAAGAGGAGGTAGATAGTAATGAATAA s bosTau2.chr20 36445099 321 + 42952723 GTTGTTTGGCTTTTCCTTTGGTGTTTGCTATTTAGCATAGTTATATACCAAGTGTCCTTGATCTAACCTCAGTGTTCACACCTCAGCACTTATGCATACAGATACTTTGATCTACTTATTTGTAAGTGTGACCCAGAGCAAGTTTTATGATTCCAGGCTTATTACAGGGCAAAATGATTTACAGATATTAAGCGTCTTTTATTTCCTAAGTGTAACTCCTCCATCAGCCACAATTTCAAAGTCACATT-----TACAGGGGGAAATA------TTAAAAAAGAGAGAAAAGAAGGAAGAATTGAGTCAGACAAAATGAATGGTACTCAAAAA a score=20017 s mm7.chr15_random 1391998 962 + 7075849 TTTAGCTCCAAAA-TGTGTCTCTTCCTATTTCCTGCTGTAGCACAAAGAGAACCACATTGAGACCAAAGGCAGCTTTATTTAAACTTGGAATGTGTTGAGAAATTATAATTGAAACCACACAATCTATTCTTTTTCCCTAATATGATTATTTCAAAATTCTTCATTCTCATACAGAATTGAAAGGTTGAAATGAAAGGCTGGCCTTGGGTAACCAAGGCCAGACTTTGAAAATTTCATTCAGCTGAAGCAAA-GTTATGCCAAACGACCCAAGAGT-----GGGTAGATATAATGATGATTTTACAAAACAATTTAGCATGTGAGTTTTCTAAAGGAAAAGGTATTAGCA--TTATTTAGATCATGTAAATGTTGAAAGACAGTCTAGAACTGAGATTGGTTTACAGTTTCTTATCACAGTTTTGGGGGAATTTT--------------------GAGATGTGATGGTGA---TCTCTTAGCTAAAG-AGATTGCATTGATGGAGATTCATATATCCCAATGGCGAAGTTACTTCTTCTC-ATAAAGCCTTACAAATATGGGTCTTACCTGCCAGAATT-ATATTTTTAGTGCT-TAACCCTTGATTTCAGATAGTTAAGAAAACAATCCTCACTCCTTGCCATTTGGTAAAGCCAGAATTTTTTTGCTTATTTTTTGT-TTATCTACTGCAAAATTATACATAAAATGTAAAATAAATGGCCTTTTTCTATTTTAGTTTCATTTGAGTATATTCTAATTGTAACTG----------AGCATGTTTTGTCTATAAATATCAGTGACATATTTAGAGAGTAAAAG----TAACTGTGAGA---------TGCCAG----GAAATCAGAATAAAATGATGTACATGGATCAGTAGAGCTATGAATATCTGTCTTGTGTTCCATAGTGGAAGAGAAATTAATATGGTATTAGAGATTCCCAGAAGAATCCTTCAAGGAAAAGATT-----GAAAAGGTTTAATCATGAATAAGAACTATCTATATTTGGAAGGA s bosTau2.scaffold410 319972 980 - 492147 TTTAGCTCTAAAAGTCTAACCATTCTTATTTCCTGCCATAGTACAAAAAGAACCACATTAAAACTAGAGACAGTTTTATTTGAACTAGAAATCTGTTGGA-------AATTCAAACCACTCAATCTATTC-TTTTCCataataatattatttaaaaataC-CCACTCTCACAGAGAAT----GATTTGTGATGAAAGGTCTGAGATGTATAACCAAGGCCAGATTTTTAAAATACAGCATCATTGAAGTGAATAATGTGCAAAGTGACCTGAGAATGTTTGGGACAGAAAAGATG-TAAATATTTTAAATAGTTGAGTAAATGAACATTTTAATAGAAAA-----TAGTGATTTTCTTCTATAATATGAAAG-AAAAAGAGAGCTTTGAGTTTATGTTGACTTACAGTTTCATGAAATGGTTTTCAGAAAGTTCTCATATCTGTGCTTTGCTATAGAATTTTGAAGGTGACAGTTACTCAGCTTGAGCAGATTGATCTCCTG--------TATTTCCTAGTGGAAAATTCTTATTTTCTCTGTAAAGTCTT--GGGTCTGGGACCTATCTACCTGAATTCATACTATTGGAATGAAAACTCAGGATTCCAGA-GGTTAAAAAAAAAATTC-AACCCTTTGCTATTTAGTAGAGCCATAA-----ATGATAGTTTTCCATCTCAGCCAGCTCAATATT-TAAATAATA-GTAAA--AACTGGCCTTTCTTTGTTTCAGTTCAATTTAGTAAT----TGATTG-AACTGCTACATTTATAATATAATTTG----TAAATATAACTGCTATATTTACAGGACAAAGGTTTCTAATTGTAAGAACATACTTCTATTAGGACTGAAATGATAATAAGACAAAGTAAATGTATCAAAAGCATTAGGTTGATATCTCATAAATACCATaaaggagcagaatttaatatagtctttgaaagtcacagaaaacttcttggaagaagtgactcatgagtagagtttctattgtaaataggagttatcc-tctgtagaagga a score=25185 s mm7.chr15_random 1393227 1825 + 7075849 AATTTAGAGGATATCTCCAAATCACACTGCAAATAACCTTTGATGTCGAGACTCGATCTAGGAAAGCATTGCAAAGTCACACACAAAAAGAATCTGATTTCCACCTTTCCTTGACCACCATCATCATTCAATTTTTCTCTGTTAAAACCCTTCATTTTATTTACAAAGCAAGCTGGTTTATATATCTGATCTACCTTAATACCC-CAATAGA-TTATGGGCTCA-TATTATCATTGTTTTGTTTACAAATTTATAACATTAATGACCTCACATTTAAA-------AGTGTGCTATACAGGGTTATAGAATAGAATCTTTCATACCAGTCTATTTGGCATTAAATGCACATAAAACCTTTGCCCTATAGTAAATTGTCTCTAGAATCTTCAACATAGAATTTACCACTGAGGGAAAAAG-------GAATTCACTTTTGAGGAAGATAATTTTGTAGAAATCTCTCAGGGCTGGAAAGAATTAATTATGAACCCAATTCCCTCAATATCTAAGTACCATGAAATGAGTTCCTTGGAAGCTATTTTTGTTCTCTGGAGTCCCATTTAGTACCAGAAGAAATGATCTTTTAAAAATCTCTTACTTCACTAGACTACTAGTATGCTTTCCAAGAAA-----ATATGAGCACATAGTC-----------------------CATGTTCTCAAAGATAAATTAAGTATCCAGATAAT--------GTATAGAACTCATATTCTTCTTAAGGGGTTATTGGAATTAAGAGAAACCCCCCCCTTTTATTTCCTTCTTAAATTTCAGTAAAACATTTCGATGGAGCAGGGAGCAGAGCAAATAGTGATCAAT-GGGATGAGTAATTCT---TTGTGAGATGCCCATGACTAACGAAA--------GCCCTAAGGGGAATCTTCCAGATGACAATCAGTAACAATTATTG----ATGATACACAAAGCCCAAGAGGTACTTTGGGAGGAAACAGTAAGAAA-CTGTCTTTAGCTTTTTATCATGGTATATTCTAACTTTCAATGAGCATGA----GATGAAAAGAATCTTTATATTTCTGATTTT--------GAAGGGATGTTGAGCCTGTTGAACTATGTTTGATATATCTCAGTATGAGGG-ATCAAACTGACAAATTCTTTAAATTCTGGTGCATTTAATCGATTTAATA--------------GATTTTTCAGTTTAGTGTAGTGAAGACTATACATTCTTAG-AACATGAC----------TTGCCTACCATCTTCTGGTTTGAGCCATAATCTCAGATGATGGTAGGGTCATAGAGAGTAG-----GTTCAATTTGTTGCTATACA---AAAACTGCATGA---CATGGCCTAATCATAGTAAATTGTTTCTCTTTCTCTATCCTTTTCATTTTTC---ATGAAATTACAAAGCCCCACCAGCTCATTTTACTAACTTTTGGGCTTGTGAAAAATAATGACAGGTTACTTGTGAGTGAGTCTAC------------ATAGGAAGTCATCATGACTAATGACAAACAAGTGCAAAGGATAATCCTCTAGTCATT---AGACACTGCTTTCAAA-AACTTCCT---GAAAACAGaaataattatatttatatttatGTATCTATCACATGTTTGCAAGGCTGAAACTGGGAGGAAAATCATATTTTATCAAAGGTATTATTTATTTGTATGTGGGTATATTTTAGTGGTGTGCATGCATGTTTCCTACTCCAGAA--AGAGATAGAGTAAGTAATCAGTGAATAGTGAATATGTGAATATGGGTATTTTTGTTTGTATACTTGATTCTGTCCATGTTGGTGACTTTTATGAATTTGAAGTATCCTATACCATTGGTCCCTGAATATCTATTACTGGTTC------------------------------ATTTTTACCCCAGCTTTTCTAATTCTGAtttctttttttgtttgttttgtttttgttttgtttttgtttttgtt s bosTau2.scaffold410 322465 1858 - 492147 AAGTCAATGGATCACTTTATTTTATATTGTAAGTAGCCTCTGATGTAGGGATTCTATCAAGGTAGGAAATGTATAATTACAT-CAGGG-------GATTTCCAACACCCCTTGACTTTCATCACCTCCTGGCTCTCCTACTCTGAAAAGCTCCCCTctagctacattgcgaagtattttct-tgccttatctaatttaatccccataacaaacttatgagttcagtactcccatcctcat-tttacagatt-agaaaattaacgctcagacagcttaagtctcttatcccaatataccagataacagaactgggacttttacacaggtatgtctggccccaaagccATACAAAACCTTTACTTTCTAGTAAACTGCTCCTGGAAGCTTCAAATTAAAATGTACCTCTAAGGAGAAAAACAATCATGAATTCAC-TTTGAGGAAAAGAACTTTCTAGAAATTTCTTA-GACTGGAAAGAACTAATTATAAAGACAATTCGTCTAAAATCTAAGCACTTTGGAA------------GTGCTATCATTGTTCTCCAGAGAGCCATTTAGTGCCAGAAGAAA-------TTCCAGGTGTTTCACTTTACTAAAATAGTAGATTGCCAGTAAATAAacacatacatatgtacatacacatacacacacacacacacacacacacCCCCACCAAGATGAATTCGATCTTCAGGCAATTCACTGAAGAATAACAGCGATAAAATCCTAAA--ACTCAATGGAATTAAAAATAACAC----------TTCATTTCTTGAATTCTAGTAAAGTCCTTAAACTGGCCAGAAGGCATCAAAATTAGGCATAAATGGGGGTGATGACTTCTCAATCATGAAATGTCTACTACTAAGGAAAAATCTGAGACTCTAGGGGAAATTATATAAATG----CTGTCAACAATTATTGGTCAGTGATACACAGAATTCAAGATGCACACTGGAGGGCAAGAGTAGGAAAGATGTCTTTGGCTTATAGTCACAGTAT-------CCTGTAGTGAAACCGAAGCTGATATGTAGAACCATTGGGGTT-TGCTTATAAACTGAGGAGGGAATGTTTAGATTACCTGACCACATTTGGTCTCTCTTTTTATATGGATATCCAGTTTATGTGGATGAGAACTCTTGGTGCATTTAATTGGTAGAATATTACCTTGTCAGGGAAGTTGATGGTTAGGTATAAAGGAAATAATACAATCTTTGAAATCtgatctttgggatgttatttagcttttcttagtttgagcttccctgtcag-tga----agggggatgaggagtggaggtcatttacttcactgtaatgcagggagaaataagtgaaattatgcatgAGTCACAGTAAATGCTCTATTTTGCT-TCTTCTTTCCCTTTTCCATGATGAAATTGTG--------------------------CTTAGGATTTGTT-AAAATAGTAACAGATCATATGTGAATGAATTTATTATATATGTTAGGTAGGAAAAAGCAGTAAGTGA--------ATATTCAAACAATA--CATTTAATCTTTCAGAGTCA-TGTTTTAAAATAACTTTCTTCAGAATATTGAGAAAAAAATA---ATAGTTAAGTCTGTAT--CATTTTTACAAGGTTGTGGTTAATAGAGGAATTAAATTTCATTG--------------------gtgaagata------aaaaatgtatacaaagtgactagtgcagagccagaggtgaaagaggtgctcagtaaatagtaagttt-----tat---tatATGTATAAATATGCTCAATTTTCTCTAAATTAATGGCCTCTGTGTGTTTGAAATA-CCCAGGATACTCATTCCTAGCTACTTCTTATTGGACCCAAACCACTCCTAGCTCCTGGATTCCTGGAACTTTTGGTTCCCCATCTTTATTACTACTTCCTCTCTATGCCTCTTTGATCCATAATTTAGTTTTATTATTATT a score=17498 s mm7.chr15_random 1550844 780 + 7075849 AGTCCTTAT-AAAACACAGAAATAATTTTAATCTAAGTTTTCATTAAAAGTCAAGTGTCAATGATTTATACATAGAGATAGAAAGAAATTTCTTGGTTTGAATGTCAATTTATGCCACGTAGAAATAGCCCCCTTTTTCATTATTCTTTAATCTAAAAGCATAGAAGACAACTGTTACAATGCACTTAATTATGAAGTGCAG-GGTGAGACAA--TTGGGCAGAATAACAGGCC-------------------------------AGACTCCTCACTGATACTGCATTTGACAATAGAATTACA-TTTCTGTTTCAAGCCGGTTTTATCAATCACACATTCATTAAGTCAAAATGGTTTCTGGTTTTCAGCACCCTGAGA---------TGCCATTATATAATACCACTGATTAACCTAGAGGAGCAGATAGACCGACTGGCAATGGCTCTCTACACTTCTCTCACCAGGCACACAGAGGCTATGC-TTCTGTCAAATTGGCTTTTTAAGTAATTGA-CACTGAATCAAATCTCTTTGGGCAGATGTGGCATTCACTCCCACTTTGCTCTTTCTCCTCCCTTTCTCATGGATTTCTATCCCTTGGCTTTATTTTTATTCTTGATCCTTTTATATCTTTTCACATGAACAGACTCCTCGCCTGAAAAACATTACTTTTAACCAAAACACAACCACGAAGTCATTGCATCTCTGATGGTAACTTAATTTTACATAAAATATTTAACTGA---ATATTTTCTAATGTCCCTGATATGGCATTACtttttttttactaatgta-aaatattaataatattatattaCACAAACAC s bosTau2.scaffold1004 66612 769 + 299649 AATCTTTATTAACATGTACACATAATTTGAGCCAAAATTTTCTCTGAAAGCTAAGTATGGTTGATATATATATACAAGTATAAAGTAATTATTTCATTTGAATAGCAATTTATACCATCTAGGTA-AAATCATTCTTTTGTTAATCACTAATTTAGAAGTAGAAAAGACACTTGTGACAATATATTTAATCGT----TGCAACAGTGAGACAAATTTAGGCAGAATTATACATCTCTGTTTTTCTATTACTGTGAAAGTGGAATTGGGCTCCTCACTGATATTACATTAGATGATAGACTTATGTTTTCTGTTTCAAACAGATTTTATCAATTACAA--TTAATAAATC-AAACAGTTTCCAGTTTT-AGAAGCCTGAGAGTTTTCTCTTGCCATTATATAATACTTCTTATTAAACCGAAAATGCAGAAATACATTTTATAAGTGATTGTCTA-AATTAAAATACCAAACACACTGAAACTACACTTTCTATTACTTCTATTTTTCAAGTAGTTGAGCACAGTTTCTAAATTCTTTGTGCAGAAGTGTCACT-------------GTCTTTGTCTCTCTTTT-------ACTTC---------------TTTCTATTGTTTACCTTCT------TCTTCACTCAGGTTGATTTCTAGTTTGGGACACATTATTGGCAAATAGCAACTAATCATGAAATCATTGCAACTATGGTGCCAGTTTAATTTC------TATGTGCAAATGAAAGAGATTTTCCAATTCCTTATGTATACCA-----ACTTTTGTACTAAGGTACAAAAAGTCACAAAATTATGTTATTCcaacac a score=4942 s mm7.chr15_random 1552912 196 + 7075849 CTGTCATCTCTGCTTTCATTAATCAAACAATAAATTAATCACTTAAAAAGGAGGGCTGAGTTAAATAAGGGCTCTACGTGAAATTATATCTGTTGTCTGTCAATGGTACATGCCATAAAACTGACTTTTCT-CCCAAGTCTGTAGATTTGCCCATCATCTATTTCTTCCTTTATTTGTAATTTTTAATTAGTCTTTT s bosTau2.scaffold1004 72738 190 + 299649 CTGTCA---CTGAATTCATGAACCAAATAATAAATTACGCATTGGCTA--GAGAACCAAATCAGATAATTCATCTGGCTAAAATAAT-TCT-TTGCCTATTCCTGGCATATAGAGTAAAATTAAATTCTCTACCTAAGCTTGCAAGAAAACACGTAATCTGCTTCTTCCCCTATTTATAATTTTTATCTAGTATTCT a score=2840 s mm7.chr15_random 1558996 103 + 7075849 GAAGAGAAACTTTAAACCACGTACTCTGAGTCAGGAATAATACACAAAAGTGGAAATGTACTCCAATATTGTTGAGGTATATAAAACCAAATTTTACCTAAAA s bosTau2.scaffold1004 78021 103 + 299649 GATGACAATTTTTAAGCGCTGAACTGTGAGGCAAAAGCAGCACATGCCAATAGAAATGTCTTACAAATTGGTTGAGAGATAGGAAACTAAGCCTCATGTATAA a score=26199 s mm7.chr15_random 1559225 1067 + 7075849 TGTTCACTGGGAGCATAAACTATAAATGCAACACT------CCATGGGTCTAAATTTGCTACTGTGGAAGGTAATTGGGAAAAATATAATGTATTGCTATTAA----GGTTAATTACATCATAATACTTAAAGAATGTACATTAAATGGCTGATCCCACTTGACATTAATGAAAACTACTAAATTATTTGCTTGGGTCCT------------AATAGCTAATGACAATTTT------TTT------------TTCATCATCCATCACTTGTATTGCTTTCTCATAGTTTAAAATGACACTATTA------TAAGGTTTACAATCAATGAGAAAATTAACGTACTAATTTCTGGACATCTCTTACGATTTGTTCAAGCTTCATGATCAT----ACACTTATAAGCATTTAGAT-AAGCATTT-ATAGT----ACTTTTGGGGTAAATTTTCATCAGATAGTGAGACTGAGAGATTTTCCTGGGTTCTAATGGAGGAGTAAATTACTGGTAACaattttataaataataaa-------cattttatttataGCTGGGAATTTTGTATGAGTATGCAT-TTAACAAA---------GCAGGAATATTCTGTACATATAGTTTTGGGGGAGAAAAATGAAAGTTCTT---GATAATTTACCACTTTTGATTACCGAGATTAACACTCTCATTAGGTCTGACAGGCACAGAAACCCCAATGTCAAGATGCACTCTCAATGCACTAAGGAAC--TAGGCTTCCCAAGTGACTTGTTAAAGAGATGTTAACACTGAGTATTACCAAAGATTTGAATATTCTGATTCGAATGAGGAATATTATAATAAGAATAGATTGTAATATGAATATTAATGATTCAATTGACTATTAAAATAGGTTATAATTAATGGAAATAAATGTGCCTCTA---AACCTGATGCAAAAA-TTTGAAAGGCTAAA-TAAAATATGAAATATATATCAGCCTGAGTTTTACAGGAAGATAATTT-----------------TTAAGTGAAAGTGT--------TGCATTTTGTGTGTATGAGAA----------------ATGATAAATTTGTGCTTAATAGATGCATATTTATTAAAT-TACTTTATAATGTCAATACTTACAAAGGTTTAGCAGTCTTACAGAAAGAATTTGAAGGTACTTACGGGAAGTAAT s bosTau2.scaffold1004 78565 1166 + 299649 TGTTCATCAGTAATATAAGGTATAAATAAAGTCTTTATTTACCATGGATATAAATATGCTACTATGGAAACAAATTCAGAAAA-CATAATG-GCTAATATTAGATGGGAAAAATTAGCTCACTGTACTTGAGGAATTTACTTAAAATAGTGGATTGCTATTGATATTAATGAAATCCACTAAGATATTTGCTTGGATATTCAATGGGAATTGAATATTCAGTGGTCATTGTGGAGAATTTGGCCTGATAATATTTATCATCAATCAGTTGTATTGCTTTCTCATGAGCAAAAATGACACCAATAAATATGGAAATTTTATAATACACAAAGAGGGTATTACATTAATTTTTTTACAT-TCTTGGGGTTCTTTTAAGCTCCATGATTATTCTAATATTTAATAATATGAGGATTAAATATTTGATAGTGTAAATTTTTAGGGTGAAACTTGGT---------ATGCTAAGAAAAATTTCCAATTCCTACCTGAGACataatttattaaaattaattttaataaaaGTAAAACTCTCACATCATTTTTATAAACTGGTCTTTCTCATACATATCTATGTTAATAAATAAATGAATACAATTATAGTCCATAAATATAAATTTTCCTGAGCAAAAGCAAAACTCTTCTAGATCATTTCCTATTTCTGATTTTCTATACCAGTATGCCTCTTGGATCCCACAGGAACAAAATCCCT--CTTTCAGTTGCATTCTCAATGTGCTATAGAACACTTTTTTTCCCATGTGACTTGTTAATGGGATGTTAACAGTGAATAATAACAAAGGTTTGCATATTCTGATTAGAATAAAGAATATC---AGCAGGCTAGAATGAAATATGAATATTAATACTACAATTGACTACTAAAATAGTCTCTAATTTACACAAATAAATGTACTTCTAAATAACTTTATGCAGACCTTTTGAAATGCTAAATTAAAATATGAAATAAA-------CTGAATTTTCT--GAAGAAACTTTTAACTTACACAATAAAATTTATTGAAAATGTCAGCAATGTACGTCATGTTTGGCTGAGAGTATCTACTTCAGAGGCATGAAAAACTTGTTTATATAATATGTATCTTAACTAAATGCATTTTTCCATTACAAATCTTACACAGAGTTATCAATATTAAACACAAAAATTAGGGTTACCTGATGGAAATAGT a score=20868 s mm7.chr15_random 1572241 616 + 7075849 CCTCCTTATTTTTGTCTTTGTTTCCCAATTAACAGCCAAGCCAGATGACAG-TACTCACTTGCTAGAATGATACTTGTTTGCTTCTCTTCACCTGTTACAGGGTTGAAAATACAGCAAATGATGCTGCCATGTGACATGTTTGTGAGGAGAAGAGTCATCTTCATATAGAAAAATCTGGCTTCATCCTGTGAATATGATTTTAATGAGTGCGGAAGTGTTGCCCCCTTACTATCTCTCCACTCCATTTGGGGCCTTGGGAACCACCCTCCTGAATTACACTCCACCATGACTCCATCAGCATCAGGAGCCTGAACATGTATCTCTGTCTCCAATCCAACTGCTGGAGAAAATGAGAAAAAAATA-CAATGAGGGTACTGTGTTGAAGTTGAATTGACAATTTCAAGGATTaaaaaaaaacaaaaacaaaaacaaaacaaaaaacagaaCAAACAAACAAACAATAGTTTGTTCTATAATCTCAGAACTTTGGTGACTTAATACAATATTTGATTTACAAGTTAGA------GTAACCAGTTAGCATTTGATGTCTATCCACTGCATAGTGTATTTTTTAGTTGGCTACATGATTTTTGCTCATTACTATAATCTTTTAGTATTT s bosTau2.scaffold2311 120660 562 + 122948 CCTATTAATTTTTCTTTATGTTGATATATTGACAACGAAACTC--TGACAAACACTCACCAGCCAGGATAATATTTGTTCGTTTCTCTTCACCTGTTAGAGGATTGTGAATGTAGCAAGTCATGTTGCCCCATGACTGGTTCCTAAGGACAAGAGTCATCTTCATGTGAAACAATCTGGCTCCATCCTGTGAATAGGATTTTGATGAATGTGGAACTATCTCTCCTCTGCTGTCTCTGCACTCCATCTGGGGCTTTGGGAACCACCCTCCTGAGTTATAATCCACCGTGAGTCCCTCAATGCCAGGAGCCTGAACATGGATTTGTGTTTCCAAGCCTAATGCTGGGGGAAATGGGACAGAAAGATCAAGACAGTTGTTGCTTTGAGGTTGGATTGGAAATCT---------GAAAAGAGTCTCATTAACATCGTGATCTTCAACAGAA-----GAAGAGGCAAT------------------------------ACTCAAATTCACATCCAAATTA-AAGTTAGGCAAATTCTGATCACTCTGCAT----TGTCTGTCCACTACATAGTATATTCTTGCATTAGATAAATAGATTTTGCTTATTA-----------TAGTATTT a score=26557 s mm7.chr15_random 1573963 587 + 7075849 AAAATATGAAAAAAGAAAACCAAACATCACGACATAATTAGCATGTAATTCCATTTATTGGG-CACAAAGACACTGGTATACTGTGCTCCACAA-ACAACTTACCTGTCACATTGAGGTTCATGATAGCCGCATCAATGAAGCCACTACCATTAAATGAACATTGGTAAGGTCCATCATCCAAAATGTTTATATTATGAATTCGGAGGGACACTTTGCCTTCTCCAATGGCCTCCTTCACAAACTCTGTACGATTTGCATATTCAGGAGCAGCTTCTTCACTCATTTTATGGCCACCTCTGTATAGGTAAACAGGTTGGGAATGGCCACTCCTGAACCAGCGTACCTCCATATGCATCACACTGTGTGGTGGGATCACCTGGCAGCTGAGCTCAGCCTGGCCTCCTACTCTAGCTAACAGGTGTCTTGTGGGAGTAGTTACCCTCAGTTTCTCTGTGGAAGAACAAAAAATACCAAAATAAGTCTGATGCCATGACCCCCTCTCTGTATATACTCTGTTTTTAAAAATACATGCTAAACACTGCCTATTTTACCTAGCTGATCCAAATGTTCAGCTCTGACTATATTCC s bosTau2.scaffold2311 121234 579 + 122948 AAAGTGTGAAAAAATAAAAAGAAACATT--GAT-TCATTTTCATATATTTCAGCTTACAGGGTCACAGGGGCATTGGTATGCAACATTCCACCATGAAACTTACCTGCTATGCTCAGATTCATGCTGGCCACATTATTAATGCCACTACCTTTAAATGAACACTGATATGATCCATCATCAGAAACACTGATATTATGAAGTCTGAGCATCACCTTGCCCTGTCTAATGGCCTCATTCACAAACTCTGTGCGGTTCACATATTCTGGGGCAGCTTCTCCATTCACTTCATGGCCATCCCTGTATAGGTGAACAAGTTTGGAATTGTCCCCTCTGAACCAGCGCACCTCCATGCGCTCTGCACTTTGTGGTGGGGACAACTGGCAGCTGAGCTCAGCGTGTCCTCCTACTGTAGCCACCAAGTGTCTCGCGGGAATGGTTACTGTCCAGTTTTCTGTGGAAGAAGGTAGAAAACCAGGATACACGTGAGGCCAACAACTTCTTCGTTGCTACACATTGT-------AGGAGACACTGAGTTCTTATCATCTGACCTGGCCATTCTAAATGTCCAGCTATGACTATATCCC a score=20695 s mm7.chr15_random 1677896 2530 + 7075849 GGAGTCCCTGGTCCTGTGATAC----AATATGTAAATAAACACCCATTCATTTACGGAGAAATTCGTGACTTCAT--TGTTAAAAATAA----AAGCCGTGAACTGAACCCTGCCACCCTATCTCACCGAGAGAGGAAG--------GATTAGAACTTACAACTCGGAAAG--GAAGAAAGTGATAGGAGGGCCACTCATTGGCCA-------TCAAACTGCTTATCAAGCCTTAAAACCAGTCAGTCACCTTTGAATGCTAGCCTAAATAAAGGGCATCTCAGA--GACTGAAGTAAAGGGCAGCATGTAGCGGGGGCTGGGGG----------ATGGCTAAAATGGAGATCAGCAAAGAGGACACCTAGACTCTAGGTCCTAGAGGGATGATGTGTCTGTGGGTGGCTTTGGTGTTAGGgtgtgagcatatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgcgcgtgtgtgCTCATGCGTGAGCAGAAGTCGATGGTGTTAGGGTGGCATGTG---TGAGATGTAGCGGGGAAGAGTAGGCAAAGAAGGG--CCTGCCCCCTCAGGTTCT-GTGCATAGCTAGGTCCCTGT----------ACCACAGTAACTGTGTGAGCGTGTGTGC-------------CACCACATTCAGTGGCTGCCCCTGG--------------------------GCGTAGGAGG-AGATCTT-ATC-AGTGCTAGGTGTGTGTGGAGTTTCAGGCTACCTCATCA--------CCCCCCATCTCTCCACCTCCCATTGGGCCTTGCCCCT--CATCCTCTATACAGGAAGTGGGCTCGCCTT-GGGTTTCAGTCTGT---TGCTGGCCTAGCTGTTGTCTGCTACCTAAGCTG-------CGGAGC---------AGGAGATGGCCGTGGACCCAACCTCCAGCAGGACTGCAGGGAACATCTCGACACAACTCCATGTTGCAGCCAGGTGATGC---CCCTG-TGTGGTCC--CCTGG---GAGCCCTGGGCACCCCACTACCTCTTGCTGG-TCCTCCCAAGGGACAGGGAGCTGGGAG----------GGGG----CGCTCATCTCTAACTTGGTTCCCTTTGTAGTTTGTATCTGGGCTTTGATGATT--------------AACCTTGTCTTAGGATTCCCTGGGGAAGGGGGTAGCCTGGCTGTCATGGTTTCTCCTTTAAGAATAAACCCCTTCCAATGTCAGGGCACAGTGGCTTCTTCCCAGTCTACTCTGTGGGAAGCTGTGTGCCATTTTCGCTAGGAGGGACTTCCCTGGATCCTGTGTGGGGATGTCTTAGCCCAGAAGGGTGGAGGAAAAGATTTGTAGCTCG---------------------------------TCAGTATTGGGAGGTGGCATGGCGTGT--ATGGGACAGGTGGGATTCAACGCTGACGCCTGTGGAGTTCATCT----------CAGCCTGGAGAATTCTCCTTAGTGAGAAAGAGAGAAGGAATCTCCCCCTGGGACCTGGCTGTCCAGTCAGCTATGTTGATTGACAGGTTTCTGAGGGCCCTAGGCTGGAGGTCA-------GAGGTAGAGTTCTAGCTTAGATTTGTCTCTGACATTACCGAGTGGCTAGAGAGGTTAAGGACATCGCCAGGC-------------ATGGGGCTCCGTC----TCCGAGGCTGCCT---------GAGGTAGGAGCTTCCCACCGTTAGCTGTGTTTACAGTACTTCAGGGCCAAGGTGGGTGGCTGAGGAAGGCAGAACTACCTTTGAAGGTCCCCTTTCTT---------------TCACACACTCCTCAGCTG---------------AACTGAACAGCAAGAGGTGAACAGTGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctttgtgaatgtgtgtgtCTCTGGAGAGGTGGCCAGAGAAAGGATCTCTGAGGTCAAAGGCCACCAGA--------TCTGACAGACAAGCTCTTGCTTGCCGTCCGTCCTCCCTCAGTCGACCCTGTACCTCACAGACC----TGTGAGGCCTTGGACTGCCCCAG--------CACTGG------AACCTTTATCCTGGGAAACAGGCTGCTTTAGGCCCTGATCTTCCCATAGGGAAGGAGCAGTCAGTCACAGAACCTGCTCTTG----TGCTGTGAGACCTCTCT---GTGACATGTGTGGGT--------CAGTCTGACGCAGGGAGTG-------------------TGAC-------------ACGACTGTCAC-----------------------------TCATGGCTGAC-------------CCTCCTCCTCCGTCAGCATCACCACTGT---------ACTGGAAATCAGGTGACCCA-GTTAGAG-----------------------CAGCCTGG--GTCTGT------GGGATGACAG---ACCTTTTCAGGGCCTCAGCGGAGACATATATGAGTCAGGGAG-ATGAACGTCTG-GTGGTTGCGAAGG-------------------GCATACGTGGGTGAGCCTCAGGGGGACAGT--GCCTGGGACTCTGAGATTCTTGGGCTGTACTCACTCTGCCCGAGGCTGGCCTT-----GTGCTGTGTGGTTTTGGAGTGGTTTTCTTAGTCTCCCAGAGATTCAGTTTCCCTCTTGCCGAAGGAAGCTGCAACCACCATGACTGCTTGAAGCTACCCTGCCCCCCAGCCTGACCCTTCCAGAACCTTCCATATGCTCTTCCGTCTAACCCTGTCCATGATGGGTGGATGCTTTTGTGCCTCTTCAGCCAGGGGTG--GGGAGCAGGTT-----TGA-GTGCCTTTTCTTA---GGCATTCTCTGTTTTTGGCTGTGGCTTG----TGGCCCGGCTATAATCTTGC------CTCTTTCATTCCTCTTCCTCTCCCCCAGGG s bosTau2.scaffold9498 3652 2737 - 27796 GGGGTCCCTAGGCCTGTGACACTGGAAATAGGTGGACATGCACCTTCCCAAACAGGGGG---TCTGTAACTGCTTGGTATTAAAAAAAAGAAAAAGCCTGGAACTGA---------TTCTCTCTGCCAAAGAAAGGAGGAGAAAGGGGATTACAAACCGTGACTGGAGAGGCAGAGGAAGGTTCTAGAATGTTCAATAAGTGGCCAATTTGATTGCAATTGTTTGCAAAGGCCCC---CCAAATAGTCACCCCTGAATGCTAAACTGAGTCAGGGGCTTATTGGAAGGCCGGATGAGAAAGGGTGTCTG---AGGTAGTTGGGGTGTCTCTTTCCATGGCTG-----------------GGGTACACCTAAA---------------GGAT--TGGGTTTGCGTGAGGCCTGGGTGTTAG------------TGGACATGTGTGTGACTGGATGAAGGTGT-------------------------------------------CAGAGGC--------TTGAGGTGGCCTGTGAGATGGGATGGGGGTGGCATGAGAGGGAAAAGATGGGACCTTGTCCCCATGGGCTCTTGTGTGCAGCGCGGCACCTATTTGAGAGTGAGAGACAGCATGTGTGTGACTGTACACGCGCCCCTGCTGCCGCAACACCCACAGTGGCCCCCCCCCGACCCCCCCATACCCCAGCCGCCCCCAGCGGAGGAGGGAGATCTTTATCTGGCTCCTGGTGCTGCAGGAGTTTCAGGCTTTCTAACCAGTCAGATCTCCCCCGCCTTCCCACCCCC----AGGCCTTACCCCCTCCATCCTCTGCACAGGAAGTGGGCTGGCCCTGGGGTTTTAGTCTCTGCCTGCTCGGCCGTCAGCCGTCTACTACCTGGGCCGAGGGAGCCGGAGCCCGGCCCTGGGGAGATGGCTGCGGTCCCAGCAGCGGAGAGAA--GCAGAGAG-AGCGCGTCGCAGCTCCATGTCCCATCCAGGTAAAACCCACCCTGCCCTGGTCCTGCCTGGCCTGGTCCTCAGGTAGCCAAAACCTCCCTCCTGACCCCTGCCACCAGCCAGGGGGCTGGAGGTGAAGGTCACGGGGATTTCTTTCAGCTCTGACTCAGACCCACCAGAAGTTTCTGCCTGATCTGCCATCTCTCAGCCCTTGCCCCCAAGCTTATCTTAGAATCCCCCAGGGATGGGTCAGGCCCTGTTCCCATGGCTCTGGCTTCAGGTTCTAGTCTTTCC-------------------CTCCCTTCCAACTCTCCCCGTGGGAGACCGGGAGCTACTCT-GGGATGATGGGCTTTCCCAGGCCCTGTGCTGGGTCG-CCCAACCGAGAGGAGTGGAGAAGGAGGTTCGAGGCCTGGGAAGGGGAAGGCTGGCTGAGACTGAGATGTGCTAGGTGCCCAGAGAGGGTGTGGGGTGTGGGTGGGAGAGATGTG-------GCCGGCACCGGGGAGGTGCCCCTGTGTAAAGGGCGCCTCAGGAGGCTGTCGGGTGAGGGAAAAGGAGAGGGA---CCCCTCTGAAACCGGGCTATGAAGTGGG---TGTT--CTGGGAGGTTTCTGGGAGCCCTGGGCTGGAGGCCAGACTCCTGAGCTTGAGTTC-ATCTTTG--TTGTCCCTTACTTGTATGTGTGACCCAGCAGGTCAGGAGGGTCTCCAGGTGCCCCCAAAGGGGGCAGGACTCCCTTCAGGTCAGGGTATCCCTCCACTCCTGGGGGCTGAGGCCTCCCACCCTGAACTGTGTTTGGAACACCTAAGGGT----------------------TAGAGCCACCCCCAAGGGTCCCCTTTCTTCCCCCAAAGCCAGCATCCCACA---CCCAGCTGGGGCGATGCTCCCAAACTTAAACAGCAAGAGG-GAGTCCTAGTATGGGAG---------------------------------ATGAGGGGTTGGCCGGAGAAGCCAAGGGGAGATGGAGCCCCTTCTTCAAAGGTCAGGTGGGATGTGACTCGGACTACCGAGCCCCTGCTT----CAAACCCTCCCCCAGCC-CCTCGGTACCCCACATCCCACGATATTAGCCCTGGCAGAACCTCAGGCTATACTGACTGGGTTCAAATCCCAACTCCAGCCCAAGAGGCTTACAAGGgccttagttttctcatctgagaaaaggagtca-taacagtacctactcatagggttgctgtgagctttgaatgaggtaacatctgaaagtgctaaggacagtgctgggcagagtgagggctgagcattagtcatcatGaccaccagcatcacgaccaccatcaccgtcaccatcatttactccatcgccgtcaccatggccatcaactccatcattatcaccatcaccgtcaccgtcatcatTATCCTCCTCTAACTTGACATCAGATAACCTGCGTTAGAGTCCAGTTCCTTGGGCAGctctgacagtcttgacacctatcaaatggggataacaacacacattcccaggg-cgaggtggggaccta-atgagTCCGTGAGTGTGCTCGGCTGTGCGGTCATGAAGGAAGGGCAGGGCACAGGTGCGTGGACGTGTGTGAGAATCCAGGATGGAGCCAGCTGGGGACTCAGAGATCC--------CACCTGCCCTCTCTGAGGCTGGGCCTCATCATTCctctgcgagctt-gagcaggtttcttaactgacccgagactctctctcctcct--ctacaggagggggCGGCCTCAGACACAGTTGGGAGCCCTCCTCACCCC-------ATCCTCCT-------------TGCTCTTT------GCTCTGTC---------GGGGTTCCGCTGCACCCTTTTGGCTATGGGTGGTGGGAACTTATTCTCGATGATGTGTCTTCTCCTGCCCGACTCACGTAGGCTGGGGCTGTGGTTTGGCCCTGACCTTCTTGTGATATTGCACACCTTTGCCTCTACCCTTCTCCTCTCACACAGAG a score=8586 s mm7.chr15_random 1681726 373 + 7075849 GGAAGGGAGCTCAGAGGGA------GAGAGAGCCTGGGCCTGCTTTGCTCTGGCTGGGCGGAGAGAGGGTAGAGTGGGGTGG--GGTTTCTGACTTGTTCT--------TTCCTTCTCCACTTAGGGTTTGCATCCTCAGCTCCT---CTCAGCTGTGATGGCTACCATAGCTCTTCCCTGGAGCCTGTCCCTCTACGTCTTCCTCCTGCTCCTGGCTACACCTTGGGCATCTGCAGCAGTGAAAAGTGAGCA-TCTGGCATTTTGATGTCCATACTTTCCCC--AGTGGGAGGTCACATCCC-----------------AGATTCCTGCTTCAGGGAGGAGATCCATCTAGCCTGGGAGGCAAGGTGAAGAGGGACAAGG-CAGTGGGACCCAAGGGCAGGTATCCATCTTC s bosTau2.scaffold9498 7827 395 - 27796 GGTGGGGAGCTGATGGGTGTACCTCGGGAGGGCAGAGCCCAGCCTGTCTCT---TGGGTGGGGGAGGAG---------GTGGCTGGCTGCTCACTCGTGCTCTCTCCCCTTCTTCCTCCATCCAGGGCTCCCTTCCCCAGCCCCCGCCCGTGGATGTGATGGCGGTTCCGGCTCTGTCCTGCTGTCTGTCCCTCCTCGTCCTCCTCTTGCTGTTGGCCATCCCTCAGACATCTACAGCAGTGAATGGTGAGGACCCTGGCATCTGGAGAGCTGGACTTTCCCTCAGGAGGGAGGCTGAGGCCCTTTTAGAACTTGTTCTGAGACCCCTTCTT--GGCAGAAGCCCCATC-AGC---AGGGGCAGGAGGTGGGGGAAGGGGGCCAATGGGACCAGAGACAGGGTATCTACCTTC a score=7340 s mm7.chr15_random 1682588 506 + 7075849 TGAAATGAACTCG--AATTCCTTTTCTTCCCAGCTGAGTCCCCTACCTCTTCCTGGGGCAGGCACAGGGTGCCAAGCGCAGGGTAGTGGACATATCCAGAGGCCATGTATGTCTCGTAGCCAGCCACTCACACCCCACTCTGCCCACAGACTGTTCCCATCTTGAATGCTTCTACAACTCAAGAGCCAATGTCTCTTGCATGTGGAGCCATGAAGAGGCTCTGAATGTCACAACCTGCCACGTCCATGCCAAGTCGAACCTGCGGTGAGTGTAGCCTGGTCTCGC-------CAGGACCTCAGGGCTGTGGGACCT--CCAAGCTG-------------TGGAATCCTGC-------------------------CTGGGCTT------------------GAGATCCACAGTGGTTAGCACCA---------------------GGCTCAGACAC----------------TCAGTCATGTGGGCCCCCAAA-----------AGTGG---CTGTGATCCAGGCTTTAGTTG-AGAGCTAGCAAGGTCCTGGACCAGGTAGTTTGGGGACAGT-GACTGTGAGCCTTTCATGC-AAGGTTAGACTTCATA-AAAAGGTAATCAGGGT s bosTau2.scaffold9498 8355 617 - 27796 TAAAGCGAACTCACTAACCCTTTCTCTGCCCACCAGGACTGAGCATCTCCTCACCTGGTAGGAACAGG-----------AGTGGCGGGGGAACCCTTGAAGGCCATGGGTGCCCTACAGCCAGCCCCACACGCCACATCTTCACGGCATATGCTTCCAACATCACATGCTTCTATAACTCGAGAGCCAACGTCTCCTGCATCTGGAGCCATGATGAGGGCCTGCGGGCCACCACCTGCTGCTTGCACAGCCGTCAGCCTCAGAGGTGCGTGTGGGGTTGACGGGCAAATGTACAGAATTGCAGGGTGCTGAGATCTTGTCATCCTGACTTTTAGACTCTTGAAATCTTACTAACAGCTCTCAGACTCCAAGAACTCTGCACTTTAAGAATTTTGGCCTAAAAAGACCCACAACTGCTGGTGCCACAGGAGTCTGGAAGAACTGGGGGgtcagatatttaggatcctggagcgtcagatatttaggatcctggagcCTGAGTCGCAGTGGGGTGTGCGGTCCAGGCTGCAGTAGCAGGGCTGGGCATGAGCCAGACTAGGTAGTTTGGGGACACTGGGCCGCTCGCCTGATATGCTGAGGATGGACTCGATGTTAGAGGCAAGGAGGAC a score=-1205 s mm7.chr15_random 1683154 138 + 7075849 attaATCTGGTA-TTTGGGAGACCCCACAGGCAGCTGTGGGGTTA-------------------------------CATTGCCTGGGGAAGTATCTGGGGAG----------CCATAGGCTTTGT-------------CAGG------CTGACTTTAGCTGCCTGGAGGT-----------AAGGGCTCT-------------------------------CGGGCAGGAGTGGGG----------------------------CTGAA s bosTau2.scaffold9498 8997 269 - 27796 AGTAACCTGGGATTTTGTGAGATGCCTAGGGCAGCTGTGGGGACAGGGGACTGGGGAAAGGCTGGGGGAACGAACTTGCCGGCTGGGAAGGAACCAGTGAAGGGTCACTGATCCAAACATCCTGCTGGTAGCAGCCAGCAGGGCGGCTTTGACCTTGGCTCCCAGGTGGGTGGTGATTCTAAGGGGCTCTGGAGGGCCTGTCAAGGATCGTGTGCACCCTATGGGGAGAATTTGGAGGGCTTTAGATGGAAAAGGCCATGTGCCCTGAA a score=2306 s mm7.chr15_random 1683292 46 + 7075849 TTTCTTGGTCACTCTGGCTGCTGGGAGGCCAGGCTGGGGTGGGGAG s bosTau2.scaffold12564 154 46 - 16123 TTTCTGGATCACTTTAGCTGCCCTGGGGCTTGACTGAGATGAGGAG a score=5508 s mm7.chr15_random 1683397 150 + 7075849 GGATGGCTCTGTGGTCCTGACTTGGTTTCT-------GATGTGACTTTTCTGTTCTGCAAGACACTGGAACAAAACCTGTGAGCTAACTCTTGTGAGGCAGGCATCCTGGGCCTGCAACCTGATCCTCGGGTCGTTCCCAGAGGTAAGTAGCCTGAG s bosTau2.scaffold12564 293 153 - 16123 GGCCAGCTCTGAGGGGGTCCCTCTTTTTCTTCAAAGAGAGGTGCTTTTTC----CTACAAAACAGTGGAACCACACCTGTGAGCTGCAGCCAGTGAGGCCAGGATCCTGGGCATGCAACCTGGTCCTGGGACATTCTCCAGAAGTGAGTAGCCAGAG a score=4924 s mm7.chr15_random 1685462 234 + 7075849 CCTCTGCTCTCCTCCCTTGCAGTCCCAGTCACTGACCTCCGTGGACCTCCTTGACATAAATGTGGTGTGCTGGGAAGAGAAGGGTTGGCGTAGGGTAAAGACCTGCGACTTCCATCCCTTTGACAACCGTGAGTATGGA----------ACCTGGTGT--GTGGGTCTGAATCTCTGAGTCTGTCCCTGCGCCTACCTGAAAAGCTCCCCC---CAGCTCTGACCTTCCCACCCAACCCCACCCCTGCC s bosTau2.scaffold12564 961 249 - 16123 CCCCAGCCTCCTTCCCTTGCAGGCTCAGAAACTGACCGTAGTGGATGTCATGAAATTGACGGTGATGTGCTCTGAAGGCGGGAAGTGGAGGAGGATGATGACCCAGGATATCAAGCCCTTTGATTACAGTGAGTGAGGACTCCAGGTAGAGCTGGTGTGGGTGGGCAGCCACCTCCCTCCCTGTCTCCCTCTCTAGTTTCTACTCTCTCCCCATCAACTTCCACATCCCCATCTGAGCAACTCACTGCC a score=9724 s mm7.chr15_random 1687040 367 + 7075849 GAAAAGGAGGAACAGCAGGTGCAGAGGAGAAGAAGCAGGTGCAAAGAAGGAGTTGGT-GCTGGGGGTGTTGTGTGGTGGAAACTGGTTTGCAAGTTCTTGGTATCATACCGATTGGTCCATGATATCTGCTCCCTCCTGTCTTCTGTCTGCAGTTCGCCTGGTGGCCCCTCATTCCCTCCAAGTTCTGCACATTGATACCCAGAGATGTAACATAAGCTGGAAGGTCTCCCAGGTCTCTCACTACATTGAACCATACTTGGAATTTGAGGCCCGTAGACGTCTTCTGGGCCACAGCTGGGAGGTGAG-GAATGGCCAA---GCCTCTGCCTCTACACCTTCCTGTTCTGGTGTCTACCCTTTTCTGTTTCTA s bosTau2.scaffold12564 2648 331 - 16123 gggaaaagagagcaccaggag----ggaggaacagcaggtacaaaggtggaggtgggagcTCGGCATGTGGCATCCCCCAAGCTTGTTCTC----------------------------------TCTGCCTTTGTCTCTCTCCTGTCTCCAGTTCGTCTGGTTCCACCCCACTCACTCCAGGTCGTCCGCATAGAGACCCATAGGTGCAACATAACCTGGACTGTCTCCCAGGTATCCCACTACATCCAAAACGACGTGGAGTTTGAGGCCCGGTTAAGGTACGCCGACCACAGCTGGGAGGTGAGTGCCTGGCTCCGTTGCACCTGCCCTGACTCCTCCCTGTCCTGGT---TACCCTGTCCAGCCTTCA a score=9806 s mm7.chr15_random 1687673 379 + 7075849 GACCCTGGGACTCAGGGCCCCAGCAGCCAGTGAGTCAGGGAGCCTTT--------------------------GGGAAAGCTGG----------GGAAGAGGCTG-TTTGCTTAGCCTCTTGACC----TCGTTGCGGGAGGCGAGGTGGAAAGTGGAG------CTGAGCTGGTA--CCCATCTCTGCCC-AGGATGCATCCGTATTAAGCCTCAAGCAGAGACAGCAGTGGCTCTTCTTGGAGATGCTGATCCCTAGTACCTCATATGAGGTCCAGGTGAGGGTCAAAGCTCAACGAAACAATACCGGGACCTGGAGTCCCTGGAGCCAGCCCCTGACCTTTCGGACAAGGCCAGCAGGTACAG-TGGGTGGCACAGGTTGGGGGTGGGAGTGGGAGAAGCTGGGTAAGGGGAAGGTGCTCTGGGAGC s bosTau2.scaffold12564 4146 419 - 16123 GACCCTGATTCCTGGGGCCCCTGCAAGTGGCTAGTTGGGGAGCCTTTCTGTAGGAGGGGGGGACAGTGCAGGGTGGATGGCTGGAAGGAATAAAGGAAGGCACTGCTTTGCTCATACTCTCAGCCAGCCCTGCCACAGGAAGTGAGG-GGGCAGTGCAGACCCCTCTGGTCTGACAGCCCTGTCTCTGCCCCAGGACGCCCGGCTACTGACCCTCAGGCAGAACCAGCAATGGATCTCCCTGGAGAATCTCGCTCCAGGCACGGAATATGAGCTTCAGGTGCGGGCCAAGCCCCGGCTAGGCAGCCACGAGGTTTGGAGCCACTGGAGCCAGCCCCTGGCCTTCAGGACGGTCCCTGCAGGTACTGATGGGGAGC-------GGAGGTGGGGATG---AAGCCTGGGAAGGAGGCAGGGACTGGTGGGGC a score=6213 s mm7.chr15_random 1688640 317 + 7075849 CCTCAACTTCCACTTCTCATACCCC--GGACAGATCCCATGAAGGAGATCCTCCCCATGTCATGGCTCAGATACCTTCTGCTGGTCCTTGGTTGTTTTTCTGGCTTCTTCTCCTGCGTCTACATTTTGGTCAAGTGCCGGTACCTTGGGCCATGGTAAGGAGACGCCTACCCAGTCTTCCTTTCCCACCCAGTCTGTCTTCAGCATG----CACATGTTTCCAGGTTGGC--CTGGGCTGCATCC--TGTTCCCTCGTATCTGCCCTCTCTCTGTCTCCCTTCTCAGCAGCTTCCTTGTC------CCTGTGCCTCATCCCACAGGTAGAAGC s bosTau2.scaffold12564 5013 320 - 16123 CTTCCCCTTCTCCTTTTCCTACTCCTTGGGCAGAAACCAAGAAGAAGATCCCACCTCTCCCTTGGTTGAACCACATCTTCTTGGGCGTTGGCAGTTTCTTTGGTCTTGTCCTCTTGGTTTACTTTCTGGGCAGCTTCCGGTGCATCAGGCTATGGTAAGGAGA---------ATGCTCCCTTCCCCGTCTTTCACGTC-TCGGTATGACATCCCCCATGGCCAGGTCAGCTTCTGGGCTGAGCCCCGTGTTCTGACACTCCAATGCTCCCTCTG---CCATCCCAAGGGTCCTCCCTGCCTAATATCTGGCCTTTCCTCCCAAAGAGGGAGGC a score=16086 s mm7.chr15_random 1689284 639 + 7075849 CCATTGTGAAATGCACAGCGT-CGCCATTCCCCAGGGGAGTGTTCACCAGGAGGTC------------TCTCTCCTGCCTCCCTC-----------------TCTAGCCTG---TGTAGTCCCTCCCACTCTACAGCCATCTTTTGACTAGCACACAGGTCTGTGTCCacagactgggcaatcctattacatgtttggttcag-gtctgtcttcatgtcagcatgtcagctccgggggagcagaggccttctttgctgtccactcatgtgtccccagcaccctgtgcagtgttctctgttggtgactgctcagtcaacatcattgaaggagcgaatGCAGGATGGGCCCATCCCCTACTCTAGGGGCTGTGGGGCTGCTGGTGGGACCTCATGACACCCACTACCTGGTCTCACTCTTCACCCCTCCC-CCTCTTCCTTGGCCAGGCTGAAGACAGTTCTCAAGTGCCACATCCCAGATCCTTCTGAGTTCTTCTCCCAGCTGAGCTCCCAGCATGGGGGAGACCTTCAGGTAGGAACCAGG-GGTAGAAAACAGAG-GGATGGTTGAT---GGACAGCCCAAGAGCAGGCT--------------GCAGGGGAGAGATGTGATAGGGTGACAATGGCTTTGCCTTCTGTGAGGAGGCTACAGGATGTGAGGCAAGCAGTTTCCCCATGGACA s bosTau2.scaffold12564 6102 663 - 16123 cccttgggcaatgcacaccttgtaccactgtccacggcaaccttgACTAGGAGGCCCACAGTCTGGCCTCTCTCCTACCCACCTCCTCGTGGTTCACTCTGCTCCGGTCTTCTCTGTGGTCTCCCAC-CCCCACGTCCTTCTGCTC-------------TttgtctccacaaaacaaacggtattcttgcacacttggtttattgactggctccccattagaatgtcagctccttaagagcagggacctcctctgttgattcttcttatgttcccagcgcccaggacaataccctcccttactgggcatgcaatcaacattgacaaaataatgTGTGTGGTGAGGCTCTGTGCCCTGCGCTCAGAGCTGCGGGACTGATGGCAGGGCATTGTGGGCCCCTTTCCCT--TCTCACCCTTCTTCCCTCCCTCCTCTCCCCTCTGTAGGCTGAAGAATGTTCTCAAGTGTCACATCCCAGACCCCTCGGAGTTTTTTTCCCAACTGAGCTCTGAGCATGGAGGAGATTTCCAGGTAGGAGTCTGGCGGAGGAGGACAGGGCAGGCATTTGACGCAGGCTGGCCAGAGGGTGGGCTAGGGTGTGGACAGGGTGGGGAGGAGGTGCAGAACAGTG-----GGTTTTGCACTTTGGGTGAAG------AAATGTAAAGT---CAGTTGCCTCGTGGGTA a score=35262 s mm7.chr15_random 1691461 951 + 7075849 AGGAGGAGTT-GAGTTCAGTGGTGGG----GAGGACGTTGAACGACCCACTTACTCTCC-----TCACTTTCTCTGGCAGAAATGGCTCTCCTCGCCTGTCCCCTTGTCCTTCTTCAGCCCCAGTGGCCCTGCCCCTGAGATCTCTCCGCTGGAAGTGCTCGACGGAGATTCCAAGGCCGTGCAGCTGCTCCTGTTACAGAAGGACTCTGCCCCTTTACCCTC------GCCCAGCGGCCACTCACAGGCCAGCTGCTTCACCAACCAGGGCTACTTCTTCTTCCATCTGCCCAATGCCTTGGAGATCGAATCCTGCCAGGTGTACTTCACCTATGACCCCTGTGTGGAAGAGGAGGTGGAGGAGGATGGGTCAAGGCTGCCCGAGGGATCTCCCCACCCACCTCTGCTGCCTCTGGCTGGAGAACAGGATGACTACTGTGCCTTCCCGCCCAGGGATGACCTGCTGCTCTTCTCCCCGAGCCTCAGCA------------CCCCCAACACTGCCTATGGGGGCAGCAGAGCCCCTGAAGAAAGATCTCCACTCTCCCTGCATGAGGGA---------------------------------CTTCCCTCCCTAGCATCCCGTGACCTGATGGGCTTACAGCGCCCTCTGGAGCGGATGCCGGAAGGTGATGGAGAGGGGCTGTCTGCCAATAGCTCTGGGGAGCAGGCCAGTGTCCCAGAAGGCAACCTTCATGGGCAAGATCAGGACAGAGGCCAGGGCCCCATCCTGACCCTGAACACCGATGCCTATCTGTCTCTTCAAGAACTACAGGCCCAAGATTCAGTCCACCTAATATAG-CAGGTGGCCAGGACTGGGATCCAGCTGCCTG-----GATCAGGTCAGGCTTGAGGAAGACTGCTTAAGAGGTCTCT-----TGAGGACAGTCCACTGCTGAGG-ACTGT-----------CCTGGCTATCCCTGCCC-----------CCC--CCCTCCAAACTTAATCATCCACTTCTGAACTCCATTTGCTACTTCCTGGTCTAAC s bosTau2.scaffold12564 10021 1030 - 16123 AGGAGGAGTTAGGGGTTATTGCTGAGTTTGGAAGA-----GACGGCCCCCTCATCCTCCCACTGTCCTTTCTCTTCACAGAAGTGGCTCTCTTCACCCTTCCCCTCGTCCTCCTTCAGCCGCAGTGGCCTGGACCCTGAGATCTCCCCACTGGAGGTGTTGGACAGGGACGCCAAGGCCACACAGCTGCTCCTGCTGCAGCAGGACAAGGGCTCGTCATCCTCAGCTGAGACCAGCGGCCACTCGGTGACCAGCTGCTTCACCAACCAAGGCTACTTCTTCTTCCACCTCCCAGATGCCCTGGAGATTGAGGCCTGCCAGGTGTACTTCGCTTACGACCCCTGCAC---AGAGGAGCTTGATGAGGGTGGGCCCAGGGCCCCCGAGGGAGCTCTCCTTCCACCCCTGCCGACTCCACCAGGGGATGACGATGCCTACTGCACCTTCCCCCCCGGGGAAGACCTGCTACTCTTCTCTCCGAGTCTCCTCAGTGGCCCAGGTCCCCCGAACACTGCCCAGTGGGGCACTGGGGCTGGTGAAGAGAGGCTGGCCTCCAGCCCACAGGAGGGAGTCCCTGGAGACTGGACCCCCCAGCCCCTGAGGCCTCCTGCTCTGGAAGCCCCTGACCTGGTGGATCTGCAGTCATCCCCAGAGCATGAACTGGGAGAAGCAAGAGAGAGGGTACCTGGTCCCAGTCCAAGGGAGGGGACCAGCTTCCCCTGGGCCAGCCCTCCTGGGCAAGGCCAAGTCAGGGCCCCCACTGTCTGCCTGACCCTGAACACTGATGCCTACTTATCCCTCCAAGAGCTCCAGGATCAGGACCCAGCTTACTTGGTATAGACAGACAGGCAGAGCTGGGAGGCAGGTGGCCGTCCACTGCTGCGCCAGGC----------CTGCTTTAGGACTCTCTGTCCATGAAGCTTTTCCCCTGCTGAGACACGGTGTCCAGAAGCCTCTGGACATCCCTGCCCAGAGGGCCTCACCCAGCCCTGCACACTCAGCTGTTGATttccaaacctcagttgctgctccctggtcctac a score=15327 s mm7.chr15_random 1695022 744 + 7075849 CATGGCAGACATTGCTAATCAATTACACCTAT---------GCATGGCAGACATTAATA----ATCATAGCCTTCCTTCCATTAGAAGCTGGATGCTGCCCTAGATTCTGTGGTACTGTGTCTGGGGCAGCCCCAACTGATGAGAAC------CTAGCCACATGTCTGGGTCA--CGCTGCCTCAGTTTCCCTCTACAATAGGAGCTCTTCCCCT---------TTCTCTAGGCAGGGGCAGCAGATGCTGAGATGGGGCAGCCTGGGAAGCTGAGAAAG--CAATGAACAAGGGTCCCCAAAGCCCAGGAACCCAGAAACCCAGGTGTTCCTGTG---TCTGGTGAGAGACCTGAGCTGGCATTGTCTGGAGAAAGGGGTCACCTTATGCCAGGTGGAGATGGCC----------AAAGCCAC-----TGCATGTCCAATG------------GAGATTGTGGGAG-TGGAGCCAGGAGAGAGCAGCTGGCA-GGGCAGTGCAGGAAAGGGGGTGCCAGGACCCCCACGATCAGATTTC-----GGGGGGAAAGCAGCGGCTGGAGAGAAGGCCCAGCCCGGGCTCTGGA--GAGTCTTGGGTGGGGATCAGGAAACAGTTAGGGACATCTTGGGCTG-CAAGGAAGAGACAGGGCTGGGGGTTGGGGACAGAAGAAGGCTTCAGGCCTCTCCCAGGTCCTTTTTGGCTAAGGTTG-ACCTGTTCCTCTTATCTCCAAGTCT----ACATCTCTGCTCTCTC-----------GTCCTTGCTCTCAGCAGCT-------TCCGGAGTTTTCAGGTAAATTGTGGTTGAATAAGTTTGT s bosTau2.scaffold12564 14018 805 - 16123 CAGGGCAGACATTGCTAATCAACCATATCAATAGTACTGGTGCTTGGCAGACACTGCTAGCTGACCACAGTCCTCCTTTCTCTGGTGCTTGGACACAGTCTTAGATTCTGTAG------------GGAGGTCCCAATTGATCATAGCTGGCATCTGGCGGTAGCTCTAGACCAGATAACTCCTCAGGTTTCCTCCACAACAGAAGTTATTGCTCTCGACTCCAATTTTCTTGGCAGGTAAAACTGAGGCTGAGATGATGGAGAGAGGAAAGCTGAGAAGGGCTTATGAGCAGGCACACCCAGGG--------------AACCCAGCTGTCCCTACGCAGTCTGACAGGAGACCTGAGCTAGCAGTGAGCAGAGTAGGGAGTCACCTTACACCAAGCGGAGATGGATTGACGGGCTGGAAGCCACAGTGTGGCATGTTTAGTGTGCAGTAGGGTATGGGTCTTGGGAGATGGGGTAAGGAGGGGGCAGCTGGCAGGGGCAGAAGAGATGAAGGAAAGACAGGCTTGCTTGGGTCAGACCATACGAGAGAGGAGAGGCACCAGCTGGGGACCAGG--CAGCCTAGGGTCTCAAAGAACTGTCAGGTGCGGAGCAGTA---AGTATGAGGCAGCCAGGGCTGATTGGGGAATAAAAGAACAGAGAGGAGAGGTGAGAAG-GGCCTTCCAGCCCCT--CAGGTCTCCAATGTCTTGAGCTGTATTTATTCCTTCAACTCCCCAACCCCCCAATACCTCTGCTCTCTCCCTACCTACCAATTCCCACTCCAAACAACTTTAACTGTCCACAGTTATCAAGCAAATTACTGTCGAAACAGTTCAT a score=5551 s mm7.chr15_random 1750056 108 + 7075849 ATTCCGGGACAATGGAGCCAGCAGATGGTGGCAGCTTTGTTCTTTCCGCCAGACCCTCAGGGTTTAAGAATAACCCGAAAGCCTGCAGCAGCTTTTAATAA-GGACCAG s bosTau2.scaffold1103 230024 109 + 283474 ATTCTGGGACAATGGAGGCAGCAGATGGCCCGAGTCCTGTTCCCTCCACCCGACCCTCAGGATCTGGGAACAACCCGTAAATCTGCTGTTGCTTCTAAAAGCGGGCCAG a score=64922 s mm7.chr15_random 1801514 780 + 7075849 TTAGCAACAACTTCCATATAACATGAAAAAAGTGAAAAACTAGAAACtaatttttttaatttttttgtgtttaaatttaaatGGTATGTGTACTTGCTTCACATTGTCTTTCTAGGTTGGCGTTCATGATTCAAGTATTTCAAGAGTGATATGTTCTCTTTTTGGATTCATATTCCAAACGAAAAAACTGAAGTTTTAAGGGAGGCAACTATGTGCTCAGACAGTCTGTCAATGACCCACCTTTTTT---CTCTCTCCGTTTTCTTTTTTCCTTTTAAAAATGTATTTATTGCAAGTTGAAAAAAAAAACGAAAAGGTCAAGTTAGTGCTGCTGCTGTTCCAAAAAAGGTCACGAGGTCAGAGTTGAAAGTT-TAAGTTCAGATTGAATCCGACCCTCCTCCCAGAAGGTCACCAGGTAGTAAAGGAGCAGGGCTGCCCATCCTATGGGGATCTTCCACCGTCGGGACTCCCCACAAGCTAGAAGAATAGTTTGGGGGGCCCCACAAGGAAGTGCCGGCAAGATCGGCCCCACTGCTGCCACCAGCGCTGCTGCTCCACTGCCCGAGCCCGGTGGACCCACCGAAAAGGTTCAGCGCAGGTCCAACGGGGTCTGCTTGGTTCTGGCTGGTCTCCAGGGACTGCCACCCTGTGGCAGGTGCACTCGGGGTGGCTGCAGGCGTAGGGGGCTGAGCTTGAGCCAGAAAGCGGCTGACTTCATCCTCAGTGGCAAACTCGGCCAGGATGGTAGTGTTTCCCAACACACACCTACAGAAAGGAGAAGAG s bosTau2.chr5 70166382 781 + 76426644 TTAGCAACAACTTCCATATAACATGAAAAAAGTGAAAAACTAGAAACTAATTTTTTTAATTTTTT-GTGTTTAGATTTAAATGGTATGTGTACTCGCTTCACATTGTCTTTCTAGGTTGGCGTTCATGATTCAAGTATTTCAAGAGTGATATGTTCTCTTTTTGGATTCATATTCCAAACGAAAAA-CTGAAGTCA-GAGGGAGGCAACTATGTGCTCAGACAGTCTGTCGATGACCCACCTTTTTTTTTCTCTCTCCGTTTTCTTTTTTCCTTTTAAAAATGTATTTATTGCAAGTTGAAAAAAAAAACGAAAAGGTCAAGTTAGTGCTGCTGCTGTTCCAAAAAAGGTCACGAGGTCAGAGTTGAAAGTTCTAAGTTCAGATTGAATCCGACCCTCCTCCCAGAAGGTCACCAGGTAGTAAAGGAGCAGGGCTGCCCATCCTATGAGGGTCTTCCACGGTCGGGACTCCCCACAAGCTAGAAGAGTAGTTGGGGGGGCCCCACAATGAAGCGCCGGCAAGATCGGCCCCGCTGCTGCCACCAGCACTGCTGCTCCACTGCCCGAGCCCCGTGGACCCACCGAAAAGATTCAGAGCAGGTCCGACGGGCTCTGACTGGGTCTGGCCGGTCTCCAGGGACTGCCAGCCCGCGGCGGGCGCGCTCGGGGTTGCCGCAGGTGTAGGGGGCTGAGCTTGTGCCAGAAAGCGGCTGACTTCGTCATCAGTGGCAAACTCAGCCAGGATGGTAGTGTTTCCCAACACACACCTGGAAGAAAGGGGAGGG a score=10769 s mm7.chr15_random 2185681 573 + 7075849 CTTAGGATTTTATTATTTTTAAGTGTCTTTAAAGACTGAGCCAAGTATAGACAAAA---------ACCAGCCTCCACTTCTCACAGGGATATCTCTCCATATTATAGACCACAGTGGGAGGGAAGAAAGGACTCTTAAATA-----------------CTCCAAAATTCAGGTGATATGGTATCTTATCTTTTTGGAGAAGCTGGAAGATGCTAGAACACATACAAATAGTTAAA-----TCCTTTGAAATGGTTTTAAAGCATTTTTGAAATAAGGTAA-AATATAAATAAAAGCAAGTTGACATCTATAAGAACAGATAAAC---TAAAGCTAAATAGTGGCTCCTTTACAAAGAAAAATAGCTGCTTGTAAGTGGTGATAA---ATACCATTTTAAAATCCTGTGACATTTTCTGTACAAGGGATTTCTTTCAAATAGGCTTTGGGCAAAGTTCACCTTTTCATTTTAGGCATAATCAAGTGGTACATGTAAGCCTGCATGATTGTTTTCTGGTTACCAAAAG---TATCTGTCATCTCATTTGATTCCAACAATGGAGTAAATTGTGACCATTTAT-----CCACTGTGTCATATGTGCACGTACTCGTGGGAGG s bosTau2.scaffold443 374577 589 - 478372 CTTAGG-TTTTGCCATTTTCAAATCTCTCTGCAGCTTTGTCCAAGGGTAAATAAACCCTGGGGTTACCTGCCACCAGCCCTC----TGCGATTTCTCAGCCCTGTGAAGCCC--TGGTCAGCAAAA-----CTCCTACACAAAATTATGGCTCAGCATTTCAAAAATTTAGGCAATGTGATATTTCTGCTCTTTTGGCAAG-GGTAGGGTTGTGAAAAATATGTTAATACCTTAAGCAATTTCTTCGAA----TTTT------TTTTTGGAATAAGGCAGGAAGGAAAAAAAAAACAAAATCACAGATACACACACACATATATATACAAATTAAAATAAACTTTTCATCACAGAAAAT----GTTGCTGCTAAGTGCTGATAAGAAATAGTATCTTAAAATTGCCTGACATTTCTTTTGTCAGAGATGCCTTTCAAATAGTCTTTGGGCAAAATTCCCTTTATCTCGTTAGCATTAG--AAGTAGAACATTT-AGCTTATACGGTTGCTTTCAGGTTACCAAATAGTCTGCTTCTCATCTCATTTGAGTCTAACAATGGAGTAGATTAGGATAATTTGTGGGCATCTGTGTGTCAAGTCTGTGTGCGGCCTGAGGAGG a score=33975 s mm7.chr15_random 2187719 1611 + 7075849 GTTGAAAGGATTGATTGTGACAGTACCAGAGACGTGCTCAGAATGCAGCCTAGCTTAATGTGATTAtgtgtgtgtgtgtgtgtgtgtgtgtgtgATTATGTCTGGTAATGCATGCTTTAAATGGCTTATTC--ATTCAT-----TCACGCACTCAAGAAACATCTTTTGATCATTTGTTTTATATT---TTGTTTTATCCATTGA------CTTTTGAGTCAGGGATAAATAAAAATTTATTTTCTC----AAGTAATTCTAATCATGACcacttaaattccaccacagccctctacaagagggatttatttcttagtttttcaatatggaaatctaaggctaagaatggtgaagtcttttaattatagtagtcagggtcaaactttggaaaactggaaatagagccaggatttcaaccaaagacttccGAGTGTGCCTTTTTTGATTGAAGTCAGCTTGTCTAAACCCATCAGTGTGAATGACAGTTA--CAAAGCTGGCTAGTGTCTG-----------------TCATCCTTGTTTTGAATTTTTGCTGAGATTCTTGCTGTAACAGTAAGAGCATGTTCT------TCTTCACacacatgaggatgctgag--------gacacaggatgttataagcaccatagtttacagacctagaaagaggcagagccaggagacaatgcaggaatctgTCCTGTGCTCCATGGGGCTGCCTCTATGCTGAATATCTTATCCAATGGTCACTTCTGCAATGTCACTACTCTCTCCTGACCTAGGCCCAGATCTGCTTGTTGATTCCCTGACAGTGAATTTCTTCCACAGCTAGCCTTTGAGGTTGGGAAGAAGAGTGACAGACAGGAGTTTTCTCCTCTCTCTGTATGTTCACTTTGGCCAAGCTGACTC------GTGATATTC--ATACAGGGTGGGGAACCAGAAAGAGCTGACTCCACCAGCAGCTGCACATGGTCCCAATCAGCACCAGGGGGCCCTGGGGGGTCTTCTTTCCTTTGCCAATCTAC-AAACAGATTGACATGAACTTGGCTGGCATGTCCTCTCCAAGTCCGGTGGGACAAGAGATGGGGCGTCATTCTCCCAACTTCTTTTCCAGATGGTTGAATCCAAGACAGAAAATGAAATGAGCCTGAAAATATGCTGCTTGGAAGAGCC--CCAGGGTTCTGG----AACATCATGATGGCTGGGCAAGAACGGTTCTCTCCCACGGAGTCAGGCTCGGTGGGACAGCCAGTGAGAAGAATAGATCATGCAATGAGAATGAAATTGCTTCTGGACGCAGGGCTTCAGCTCTGTGGTTTCAACTCCCATCAGCCAGCAGCACT-GCGGCTTTACTCAAGCAGCACACTGTGCCATCCACTAAGCGAGTGCAAGAAGAGTCGGCAGAGGCAAAGTCTTCCTGATGAGTCCACAGCTGCATTTGGCAAGAGCACATTAGCTTGTGGAATCGGGCCGAAGAAGAGCCTCAAAA--TAATAAAAGGCAAGAATTTTGTTTTGTTCTTTTCTACAAAGTGAGTATATTCTACTTATATCACAGGTGAGAATGGTTTGAAG-------GTTAGCCATACTGAGGACCTACTGTGTGCTTACACAGGCCTATTCAGGATCTCTTCATTCTTTTAGAAAAGATGTTGTCATCAAGTGAATACACACTCA s bosTau2.scaffold443 377212 1524 - 478372 gctgtgaggattacatatgataatagaagtaaaccatt-aggacagtgcctagcTTAATAAAATCAGTTAT-------TACCTTTGTCATTATTGTTACGGTTGTTAATG-----TTTAGGTGTATTATTCTGCTTTATATTGCTCATTCTTTCAGGAACCACCTCTC-----TTTGTTTTATGTTCTCTTACTCTACCTATTGGAGGTGGTGCTTGGGACACAGGTAAATAGCAATTTATCCTTTCCTTTAAGTAACTCCA-TCATAGCCA--TCAACTCCATGGTAGACCTCTGTAGGAGGAATGACTTTCTGAATTTTCCGAAATAGAACATTGAGGTTGAG--TGTTGATATCGTCTGATT------------------------------GGAAATGGAACTAGAATCCAAACCCAAGACCTCTGACCACAGATTCGTTCCCTGAAGACA---CATATATACTTATCCTAATGGGCTGCAATTATGCAGGGTTTTGCAGTTTATGAAAGAATTTTAAATGTATGGTCTTAGTTTTGTGTCTTTGCCAAGAGTCTTGATGAAATAGGA----CATGTACTGCTGATCCTTCTTACAGATGAGGTTGCTGGGCCATAAGGGATGCAGG-TGGTCCAGGTTTCACAGTTGGCAGA-------GGAGG--GTGCGAGGAAATAAGCCAGGATTCTGCAC-----------GTGCTGCCTCCTTATGGGGTGAATTGTCCAGTGGTCTCCTCTTGAGCCCTGGAACCCGTTCCTGA-------------------------TCCATAGCTGTGAGCCTCACCACCAGCTCCCTTGTTGGACTGAGCAGAGCAG------------------------------ACCCTCACTTTGGCCATCCTGACTCTTCCTGATGATCTTCTCATCCAGAGTGAGGAGCCAGAGAAAGCTAATTCCACCCTCAGCTGTGCATGGACCCGTTTGCCACCAGCGGCCCCTCAGG--TCCTCCCTCCATCACAGATCTGCCAAACAGATTGACATCGACTTGGCTGGCAAGGCCCCTCCATGCTC--TGGAACGAAGGATGGTGGGG-AGTCTCCTCACTGTCTTTCCAGACTGCTGAAGCAAAGGCAGGAAATGAAATGAGCCTGAACATAGGCTGTTTGGAAGAGCCTTCCAAACACCTTGGGCTAAGCCCAAGGTGCCAGGGCAACAACTATTCTCTCCTGCGGAGACCCACTCTGTAGGGCAGTGGATGACAAGGCCAGATAATCTAACAGAGAGGAAATTGCCTCTGGACTCAGGA--TCATCTCTTTGGCTTTGGGCTTCATCAGCTGTCAGTGCTTGCTGCTTCATTCAAGTGGCATGCGATGGTATCTCCCAGGGGAGCGCCAGAAGAATCAACACTAATGAACTCTTTCTGATGAGCCAACAGCTGGATTTGGCAACAACATGTTAGCATATGAAATTAGGCAGAAGAAGGGCTCCAAAATTTTTTAAAATGC------TCTATTTTGTTGT-------GAAATAAGCCCGTCACATTTATTTCACATGTGAGTACAATTTGAAGGTAGGGAGTTGGCAATTTTGAACAGCTATTATGTGCTGA---GGGATTTATTGGTGTCATTTTA---TCTCATGAAAAATTTTGTTCTCAA---AGTACATGGTCA a score=49850 s mm7.chr15_random 2190714 1453 + 7075849 CTTCCCTTTCCCAGCCTTTATAGGACACAAAGCTCTGGCTCCTT---TCATTTATCAGTCTGGGAGCTTCTGGAAGACTGAGCCCAGGCCTCACTCTCTCTGCTAGCTCCTCTAAGTTGAGAG---GCATACTATTTTCAGCTGGCATCTCAACCAATGCTCTTTAAATCAAATGATGTTGCAATCCACCCACTCCTGCCAGCTTTCTCTTTTGGCAACCAGTGCTGTATGCACACAGAGCCAATGAGGCTGGAGGCGATCCAACTGCCATGGCCTCTGCCTTACCCACCACTCTCCCCAAGCTAGTTGGCTTGGATGCACATGAACTTGATCCTATGACCTTGAATTCATTATCTCTGCATGCCAGCTCCCTGAGTTAGTCAATTTGAGACAGATGGATGTTCGAAGCCAGTCACT--GGCATCTTCAGCAACCGTTGCCTAGAGTTTAAACTTTCTTCTAATTGATTCTGATTATCCCTGCCTTGGCCTATTCA-GGGTGTGAGGC--------------TTGAGAAAGGCTTTCTCAGTTCCCAG--------------AGGCTTTTCCAAAGCCTGGAGAATAATCTAAACATTTAATCTAAAGATTTCCAGAAGGGCAACTTTTCATATGCACCAGGAAGTCTTCTGAAATGTGTTAAGCAAT-CATTCCATTCCTGCTGATGGATGAAATGCTGGCATCATTATCATAATGTTGTGCTGTATTATTTTGGCTGAAGATTATATTGGGTTTTTGACAAGAGGAGCAAAGTGGCAAATTGCAATAGACCACAAGAGAAATTAGTTATAATTCATTAGATACAGGCACCCCTTGAGAGAATAATAACAATAACAGTAAT-GTAGACAGCCCCCT-----------ACTAAGTTTCTCATCAGGATGTAGGACTCAGGGTGGATAATGTTCTGATTACACTGCTGGGTTGATAGATCAAATCTTGACTCCATTGATGAATGAACATCAATCATGCTGGCATATCTGATGGAGCCAAATCACCTGTCAATTTGATGGTTGCTTTGAAAAATTTATCATCCCTCCAAGAACAGTCACTCATTCCAACACCTGC--ACCCCAACAACC-------AAGGCTGTCAATGGGTTTTGAA-----------CACTTTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtACCAGTATCCCTACTCTA--------TGGAATTGACCA--TTTTCTCCTGAGGGTTCTG----GCAGTGAT----------GCCTTAGAGTTTCCTTGATACTTGAATGTGTGAATCTGGGCCAAACTCTGTGCAATTAAAGGATTAATTTGTGGA--AGATTTCTTTCAAATATAAATATGAATTTTGTCTCATTTAGCTCAAGTAGAAAGACAAAG----CTAGATTCTAATGTACAAGGCTTTA---------------ATTTAGAACCTATTGCTGAGAAAGAAAGAAACTTTGGTGTGATGTGTGCAtatatgaat--------atgtgtgtgtgtgtgtatagtgtaagtatgtgtgaatatccatgtgtatgc s bosTau2.scaffold443 380815 1510 - 478372 CTCTCTTATTCCAGCTTCATAAGAATTCCTAG-TCTTCCTCTTTGGTTCACCCttcacactgtgagtttcttgagggcagggatcagaccttgctaact-tgttaactcctcactggtggtagaacgtaatcttgttcaagtaggtgctt--gttaaagctttctgaattgaatg-----------CACG-GCTCCTGCCATTTTTCT-TCTTGGCGGCCAACTCTATAGGCAGCCGTTGCCAGTAGAGCTGGAGAGTGTCCAGCAGCTGTGGACTCACGGTTTCCCACCACCTTCCGCAAGCTAGTTGGCTCAGATACACATGAACTTGACCCTGTGACCTTAGACTCATTATCTCTATCTGCCAGACCTCTGAGCCAATCAGTTCCAGACAGATGGCTCTTCAAAGCCAGTGACTTTGGGGTTTGGAGCAGCCACTACATAGAGTGTCAACTTCCTTCCAGAGGATTCCTATCATCCCTATGCTGGCCTCTCAATGAGAGTGAGGCAGCCCTGGCCATTCTCTAAAAAGGCCCCCTT-GTCTGCAGTAGGCTGGGCTGCCAGGCTTCTCCCAAACCTCAACGGTAATCCAAAGATTGAAGTTCATTCCTTCCAAAAGGGCAGCTTTTCAATTTCATCATGAATTCCTCTGAC-TGTGTTAAGTAATGCATTCAGTTGCTGCTGATGGATGAAATGCTGCTACCATTATCATAATGTAGTACCTTATTTTTTTGGCTGAA-ATTATATTGGATTTTTGACATGAGGAGCAAAGTGGCAAACTGCAATAAACTGCAAGGGAAATTAGTTATAATTCAATAGTCACAGAGGCCCCTTGAGAGAATAATAACAATAACAATATTAGTAGGGAGCTGTTTTTATTATTGTTACTAAGCTTCTCATCAGGTCCTGGGACCTGGGATGGTTAGTGTTTTGATTATACTGCTGGGCCAGCAGATCAAATCCTGACTCCACTGATGGGTAAACATCAATCATGTTGGCATATCTGATGCAGCCAGATAGCATGTCGATTTGATGATAGCTTCGTAAAATTTATCATCCCTCCAAGCTCAGTTACACATTCTAAGCACGACCAACCCCTAGGACCAGTGCAAAGGGTGGTGAATGGGCTTTCGATCCAGAACTTGCCCTTTTGT-------------------------------------TGTACAGACACCCACACTCTGAATTTTACAGGTATTGGTCAACTTTTCTCTAGGGAGTTCTGGTCAGCAGTGATTTGAAAATAAGTCTCAGAGCTGCTTTAATGCCCAGGTGTGTGAATCTGGGCCAAATAATGGGTAATTTCAGAATTATTTTGCTGATTGGATTTCTTTCAAATATAAATATGCGTCTCATCTCACTGAACCCAAGTGAGAAGGGAAAGAAAACTAGATTCCACCT--CAAGGGTTTAGTGTCTAGTCTCCAGACTTATAACTTA----TGAGGGAGAGAAGAATT---GTGCAGGGAATAAAAGCAAGGATCGTAGGCAACACACACTCACACACTTAGCATAAACACGCATGCAAATATATGTGTATGC a score=2394 s mm7.chr15_random 2192367 46 + 7075849 tatatataattatatatacaattatacaaatataccagtacatttt s bosTau2.scaffold443 382526 46 - 478372 TATATACATATGTATATACACATAAACACAGATACCAATACATTTT a score=13203 s mm7.chr15_random 2192523 928 + 7075849 gataagcatatatttgtctacttacacaagtatacatgttcacataaacaagtatac-agatgtgtaaacacttttagatatcat-------acacatatGTGAGTCAAACATATCACAAAATCATGCCTATGATGCACATAACACGCTCATCTTTTCCTACATACACAAATGTTCACCCATGCATC-TGCACAGATATGCATATACATACACATAATATATGCTCACACACACCAGTGTACagagagagagagagagagagagagagagagagagagagagagagaATGCATGCATTACTCTGTCTGGACATGATTTTCTTTCCTGTGATATTTATACTCTTCTCCCCATTCACAGCACTGTACCCAGATAACTGTTTCTTTCCTCCGTGGTGAGGCTACTCAGGAGATTCTGGTCTCAATGAGTTTCTATTTTTCCAAGCTAGTTGGGTGGGGGGGATTTATTTCTCTCCCAGGGTCTTTTGGCCTCCTGATTTCCACTATCAGTTTATTGCACCCTTCAGCATGTCTGGACTGCCTATGAGTCTTTTCTCTATCAATACCTTGCACGATCCTAT------------TCCTAAG---------------CATATCTGCTACCCTGGAGGGAGGGAGAAGTCAGTA-CACTCAAAAGCCTGTTTTATATTTTCAGCTGCATTTGGTACCAG--TCCTCAGATGGTCTATTAACA-TTTCCAAGCTTGTCAGAGCATTTCTAGCTCAACAAAGGAGGAAGTACATGGTTTTT-AAAAATAAGGAAAAATTGAATCTGGGTGTGCCAACCCATCTTCCCAGTGCTGTC---------TTGTCTAACAACTCCAGGCCTGCCTTCTCTACTGATCAGCTGCCTGCTCCAACCAGTGTTTCCTTCTTTTCCAGACTTTGAGTTCTTTATCTACAAAAATGATCAGGTTCAATTGCTAACAGTTCTCTGAGTTCTATCAAGC s bosTau2.scaffold443 382683 824 - 478372 GACAAGCGCATAT----------------GCACGTATCTTTTCATGATTAAGCAAATGAGATTTGGGG--------AGGTATCATTTTAAAAACTTAGAAGAAATTCTGCCAGCTCAC----TTGTAGAAAAGCCACATTTTCCCCCACCATTTCCTCCTCCACACATGCCAATCTGCTCATACTTCTTGTCTGGAGATTTTAAAACCTGCTTATACAATATAGTCTTATTC-------------------------------------------------------CTGCAAGCTCCCCTATGTCTG-----------TTTTCTTCTGATGCT-------------------GTAAGGCTCTACCGTGAAGACATCCTCTTCTTCTCTTG----------------GGCTTTGGTTT-------TTTCTATATTCCT-------TAGGTTCAGAAGGATATA-TTCTTCCCAAGGTGTCTTTGGCCTCCTGGTTTCCATT-----TTTCCTG----CTTTAGC-TGCCCTGACTCCCTGCAAATCTCTGCCCTGTTAGCAGCCACACCAAGCCCACAGAGACTTGCAGTCTTGAGTTTGCCCTGTGGGACCCTGTCAGCTACACTGAAGGGAGAAAGAAGTCAGAAGCACCAACCGTCGTTTTTCAGATTTTCAGTTGCATTTGATGCCAGGATTCTCAGATGGTCTATTAATATTTTCCAAGCTTGTCAGAGCATTTCGAGTTCAATAAAACAGGAAGAGCATGATTTTTAAAAAAGAAAGAAAAACTGAGCCTGGAAATGCCAGCGAATCTCCCCAGAggagtcagcaccaggttgtctaatgactctctatttgcctcctctgctaattagcttgctgctccaacgaaggcagccttctccctcgggtcacagtttcctcatctgtaaaaattaggaggtgagatggctaaggtttgtctgagctGTATAAAAC a score=6283 s mm7.chr15_random 2193967 526 + 7075849 CTCAGAGAAACATTGGCAATTGAACCTGGATattttgaagccggctgagcagcatcttaattgcggttgtgccacttttcaag-tgtgaaatcttgggtaaggtgcctagcatttctggacTAGGGAAAATAGA----AACACCTTCTCAGACTGAGCAA-------------AGTGGGAATGCTGTGAAGTTCATTACAGCTCACTTCAGTGTAGAAACTA----CCCTACACATGGGTCAGTAACATTgagagagagagagagagagaggcagagacacagagggaATATGAGAGGATTTATATCTCTTGGCAGCAGCAGGAAATCTTAGTTGCTTTCTAATTTCCTTTAATAAGTCACTATAAACTTTACATTTTCCAT---TATCTAAAATTTGAAAAG----TGATGTCTTTTAAGCATGTTCCAAGTCTTCTGATAT--TGTATGTTTGCTGCCTtcaatggttaacagcac-tggctgctcttctggaggaccaagattcaatttctagcac-ccacatgttggcatatgtc--------tataacttcagtttcaggga s bosTau2.scaffold443 384679 511 - 478372 cccaaagagtcagatacggttgagACTGAAC----TGAA-Tagacagactagggtttgaactgtggctgtgtcact----aagctgtgagatcttgagcaacgtacctagtctatttgaacctGCAGAAACAGCTAATAACAACTTCAGTGGCAGGGTTACCACTGTTGAAGCAGTGGCAGGGCTGTGAAAACCATAGCCACTCACACCGGTGCAAAAGCTACCAGCCCTAGTCACGTAGCTATTACCATCAAAGGGAGAGAG---------------------------------GGGTGCACACCACCCAGCTGCATCAGCAAAT-GTGTTTCCTTTCTGACTTGCCTTGATAACATACCATAAGTCCAAACATCCTCATATGTGTCTAAAATCTGAGAAATACTTGATGTGTCTTTAGGACGTTCCACTTCTTCCATCATCATGCAAATTTCTTACCTGCCAGGA-----AGCTTGTAGCCACATTTTT-------CAAAATT-AGCTGCAAACACTCTCCTTTTTGATACATGTCCCTTTCCTTCTAATTTCTGTTACAGTGA a score=7627 s mm7.chr15_random 2194690 515 + 7075849 CCCTTTACCTCTAC-TACCTCCATGCTTGGCTCCTAAGACTAAGGATATAATCTTATGTTGACTCAATATTATTGCAAAATTCTAGAACTGTAGGAAAAATAAAATG-TCTTCTCTGAAGTTTATATCCATTCTTTGCTAATTATTATAATAATGGCACAGAAAATGTGCTCTTTCAATCTTGTTCCCA------------------------------------GTCCATGAGCTTGCTTGCAACGATGGTTGAGC--CTCCTCAGTCCTCTTTAGCATGCCCATCATGACAgtgttagattagatttttccagagcagctat--caagccaggaatctgaatgcaaatagatatttgaaatatgattcaagggaacatgattaggagtgggcagagggagcaggaaaagggaagaaagagaacatataagcatgttaccaagcaattagccgatacagcaagattcaagtgacaacaacaacaatgcaaattcta----ggaactctaggagacaaagtagaaaatgctccagagttaCTTTTATCTTTTGCTAAGAAA s bosTau2.scaffold443 385404 520 - 478372 cccttcatctctacatacttcagcattcatttcctaagaccaaggaca-agccttatgccactgcaatatgattataaaagtcaagaaacttggcatgtatacaggactattatctacaacctatagtcaaattttgctaattctcctaattataccat-----ctgtagctccccacccttgccaccatcttggtttggatgcaataccatgcctgtctcttgctcccgtatgtctccttacctctaatttagagcagttcctcag---tctttgctttgtctttcataaTtgtgtcagactgggttctccc--agcagcaatgctgagagagggattcaaatacaggtagatatgtggggaatgattctag-------gattgtgaattg-----ggaagtgctacaaggatgagaaggaagccactgtgtgtgtcatcatgcaagtaacc----------------agtgtgagcagcgaaggctcaaattccaatgcagagctctgggaggcagtgtagaaagggcttccaagtta-ttccatcctaggc-aagaaa a score=36029 s mm7.chr15_random 2197256 1182 + 7075849 TCAAAAGATGATCTTAGCTGCCAGGCACTGGGAAACATAGACTGTCCTCACCTAAGTGAGCCTCAGTGGGTTGTGCAGCCTGG--GCACCTTAAGGATG-------------CTGACACCAGACTGCAACAGTATGAATGTCTGGAAG----GACAGCCTGAATAAGCACATCGTGAATTTATGATCCACAAAAT--TCGGATGAAATTTAAAACCCCAGTGATCTGGAAAAATGGCTAGGAGCGATAGTAAGTGGGATAAAatcaattggtgatttttcctagaatcaattattctgtcagttactgctaaagggccattttttaattcagtccatcttaatttattacatggacattGCAGGTTACTCTCGCAGCTAGCTGGATCCCTCTTACTGCCAAATCCTCAAAATCATTTTCGAA----TTACATCTTATCATACTATTTCCCCAAA------------------GGGCTA---------CAGGGAGAGAGAATCCATTTCTTATTAATCTCTAACTAATAGTCTAGGGGCTACAGTGCCAGCTTCTTCTGAAGAAATGGC-CTTTTGTCCTTCATTTTGCTAAGTACCAGTTGTAGATCC-CATCAGTAAACACCACAGATTCCAGAAGCGCCTCTTTCCCTTTTCTCTGATCACACTGTCTTTATGTTGTCACATCTAATTTATGTCATTTTCTCAATTGAGGGAGGTGCCTTTAAAATGGCCTTTTTGAAGGGCAACTATCATAAACAGACCGTTAACCAGCCCCTGGTCCCCTT------CCACCCCCAC--TGTATCTGCTAACCAAGGACTCA----GAAGCTGGCCTCCCGGGTCTGAATGAATTGTCTTTATAATGTGTATCTGGCTATCTTTTGACAGGGTTAGCACATGAAAGTGACCTCAAATTATGCTTCTTCTTTGTAAATTAGCTGGGAAGATGTATGAAGGAAATAAAAG---AGGATAGGGCTCTCCAGATCTGTTAGGGATGTGTGCTACAATAATAAATCTGAGTTTTA-AAATAGCTGGTGGGCTTGAATCTCTAAAGAATCTCAAGGGGA-AAATATTCATCGGTTGGAAGAGAAACTTGTGTATTATCTGGAGCAAACAAATATCACTTCCTCTCATGCGGCTCACATGCAAAAAGTCAGGCTTCTGTAGAGG---------TATACCTTATAGTCAGTAAGCAGAGttaagaacctactatgtacttggctttgtgataagggttgggaggaG s bosTau2.scaffold443 387086 1211 - 478372 tcaatagtccagccaagctgccagccaacagccagcaccagttactaccatgcacatgacttaccttggggattccagcccagctgaatcccagagatggctgaaactctatctgatgtctgactggaatcacacagatgactgcaagtgaagactgctcacacaagtgcatctcaaattcctgatccgcaaaataagcgggtta---tggaagcccctgaaatttggggtaatggttggcagtcacagtaactTAAAAaacatccattgatgattcatgcctgagtcaattagtatactggtggctgctaaaagaaaac------ataaattctattattctttattactt-----ttGCTGGGTAT----------------ATTCCCCTTACTGCCAGCTTCCTCAAATCCTTTTAGGAACTGCTTCTTCTTATCATATTATTTCTTCAGGAAAAATAAAAGGCCCTCTGGGCTAAGACCAAAACAGAAAATGAGAATCTATTTCTTATTAATTGCTAACAAATTGTTCAGGGGCTACAATGTCAGTCTCTGACAATGAAATGACATTTTTGTCCTTCCCTTTGCTAAGAATTAATTGTAGATCTGCATCAGAAAACATAAAAGATCCTAGAA------CTGCAATTTTTTTCTGATCACACCATACTTACTTTGTCATATCAAATTTATATCATATTCTCCACTGAAAGAAGTTCCTTATACAAGGTACTTTCAAAGTGCACCAGCCATAAAGAGAGAACGAAACAGCTTGTCTTCTCCTCTGCCCACCGCCCCCACTGTGTGTCTGCTGACCTAAGACCCACCCTGGGGCTGCCAGACACAGCCTGACCGTGTCCTTTCCATAATGTGCCTCTGACTGTCTTTAGATGGGGCCGGCACATGAAAGTGACCCCACATTATGCTCCTTC--AGTGAATTAGGTGGGAGGATGTGTGAAGATAATAAAAGAGAAGGATTGGGCTTTCAAAATCTTTTAGGGACACGAGTGAAAATAATAAATCTGGGTCTTATTTTTAGCCAGTGGGTTAGAATCACTAAAGAACCTCAAGGGGGTAGATATTCATCAGCCAAAAGAGGAGCATGAATATTATTTGGAGCAAACTAATAGCATCT----TCAGGCTGTTCACGTGC--AAAGCCAGGCTTCTGCAGGGAGGAGAGTTTTGCACCTTACATT------GCAGATCTAAGAACCTCTGATGTGCTTGTC-TCATAATAGGAGCCAGGCAGAG a score=2519 s mm7.chr15_random 2198748 113 + 7075849 ATAAAAGTTGTTTTTTCTTGGCTTCAACAAATAACCCATGTACCTGAGG------ATACACACACCGACATGGGGGTACTTCTTTACATTCTTCTTTTATCCCTCCTTTCCT-ACCTCAG s bosTau2.scaffold443 388308 120 - 478372 ATGGAAGACATTGATTCTTGGCCTCAAGGAATTTTCCATTTATTTGGGGGAGACAAGACATACACAGACGTACTGCATCTTTTATCCACTCTCTCTCCATTTCCCTGCCCTTCACCCCAG a score=19511 s mm7.chr15_random 2200897 825 + 7075849 GTACTGTGTGTCCCTCAGAAATGTGCGCCTTGTGTTTATGGTTGTAGGTTTCCTATCTGT-------------CAAGGATAGTGTTTTACACATACTTTAAATGCTCCAGAGATGAGCACTAAATG---------AAATTGCTCATCCCCGGAGTTGTTCTTAAGGATGTATGT-----CACTAATCACTGTCCTTTCGTTTCTAGAACCATGGACAAATTATTCTACCTTCACCTGCCATTTTGTATGTATAACATTACATCTGAACTGCTTCCATTACTGAGGGGGTTCTTAAAGGTACCAGTAAATGCTCCTATGATCCTCCTCTAGTCTTCCTGTGTAGCCCTCAATGTCCCTGACAGGATAGACCAGGTTTATGGGAAGAATAGAATCTTA----TTAAAGGCATTTGCATAAATTAGTGTCATACA--ACACCTAGGCCCAG--TTCTGGGACTCATGAGAGAAAGGTAGG------AGGAAGGGAAGGGAAGACAAAGGCTGCTAAAATGTGCTTCTCCCCATCTCTAATTTTGTCAAGATCCAGCCTCCATATATATCCCTGTTAGCACTTCTGAGTGGAAGCCT--GCCTTCCAGATGGCTGGGGAAAGGCTTATAAGACAGCC-ACAAATAATTCTTGAAA-----AAATTTCTCATTAAAAGTGAATGAAAGCATCAATTTTCAACATACCCATTTCAAACTCTAAGAATTTTTAAAGGAAATTAGATGTATGTGATCTGAAGCATACCAGAAGACATTGAAAACTCTGAAACTAGCTCCTCATCCACCCACACGTTGATGATGTGTTCTCTCCCCGTGTGAGCA-TGGCTTGGGTATTGTAGAGGTCATGTCTCATGAAGGAG s bosTau2.scaffold443 391363 825 - 478372 GCATCATATGCCCCTGGAGTGAGTGCTCCTCCTGTTCAAGGTCAGGGATTTCATGCCTCTGTGTTTTCAGCACCACGGACAGTGTCCGACACGT--TAAAAGAGCTGCCAAGACGTGTACTGAATGGCTTTTTAAAAATTAATAA---CCAGGGTTGTTCCCATGAGTAGATGTAAGTCCACTAAT----GTCTTATGATTTCTGGAGTGCTGAATGAGTTTGTCCTTGATCATCTTTCCTCCTAGAATCACCATGCCAGATAC-ACCATTTTTTATTTTTT------TTTTTTGAGGCATC--------CTTCTGAAATA-------AGTATTTCTTT----CTCCAGGTATCCTTGGTAAAACAAAATATATTTGTGGGAAGAGTAGTGTCTTAAATCTATAAAACATTTGTGTGACCTGGAGATGTGCATAGAATCTATGCCCAGAGTTCTGGGGATGCCAGGAGAAAGGTCGGGAAGCCAGGAAGGGAGGGGAGT------GTTGCTAAAGCATGCTTCCCTTGATTTCCAATTTTGTCAGAAGCCAGCCTCCATATATATCCTT-TTAGCACTTCTAAGTAGCAGCACAAGTCTTCCAGATGGCTGTGGAATTACTTGTAAGGCAGCCTGCAGATTATTCTTGAAAAAAAGAAAGTTCTCATTAAAAGTGAATGAAAGTGTGAATTTTCAACATGTTGGTTTGAAACTCTAAGAATGTTT-AAGCGAATTAGACTTATGTGAAATGAGGCACACTCAAAGCCCTTTAAAGCTCTGAAAGTCG---GTCAGTGAACTCCTCATGGATAGTGCATTCTTGCTCAGTGTGGGCACTGCCGTGGGTACCAGGGTGGCAGTA----ATGAAGGAG a score=23158 s mm7.chr15_random 2203621 1203 + 7075849 TATATGTGCTT-AGTTGTGGTTCTGTAAAGAAT-------------AAATCATGGTGAAAACTATTTTTCTCTGTAGAATATAAGTGCTATTGTCAGGGAAGGTAACCAAAGTAAAACTCAGAGAAATTGCAATTATTCTCACAC-----CATGTCTAATCCATGTCACAAATGCTGACCC-TGAACTTTTGT---TTCATTTAGACA------CCCTTGGGGGACAGTA----TTGGGGTTTTTGTGAGGGGAGAATAGACAGCTATTCTCTAGATCATTTTGGTCAGATTTAAAAA-------GAACAAGAGAACTCTCAGAAAACTCAAGGTCCAATGCTTGGTTGGTCAGTGAGCTGCCTGCTTATTTGGAGTAAGGAGTACATGACATCATGTCCCAAGAAGCCCACATCTGTACCA------TCTGGAGGGG-----CTGATGGGGCAGACACTACTCATACA--TGGCCACCAGTATTTCCTCTGAATGGTCCAATTATTCCACAGCTCCTCTGTTGAGTGGAAACAAGTAATAAACAGGGATGAGGGGAAGGAAAAGGCTCTTCAGCTAGTTAGCATGCTGTGTGGTCCCCAGG-AACAGGGCAGCGATTCATGAG-TCTTCCCAACCATATGTTAA-TAGAACTCTGTAATCAATTTAAGAAAGGAGCAATCTCATGAATGCTTAACTTAA----AGTAGCTTCATA-GTTTTAGAGCACAGAGAGGCCCCCTTTTCCTGTGTTAAATGCCATTGattttttt-tattattttatttaaaaatttatttGTTCTATTTT-TATCTCTAGAAAATCACATAGCAACTAT---------ACTACCAGAATGCATTATAGACAAACTAAAAAGCATATTATATAAACCTTAGTGGATCTGTCTTTATTAGCTAATTCTACCCATTAGTCCTCACATTAGTATGCATCTACTTTTATTCCACTCTTGTTATTTCAATATTTGTATAATTCTATGCTAGACTACTTTAGAGCTTAGGATTTTCTGGGTAGGTTTGACAATAAACCCAGC-ATGG------CAATATATTCAGACATATGTTATAGTATATGGCAGGACTTTGTAACACTAACAAGGAAGCTTGGCTCTTCTCTCTAGGATGGAAAAGACTGAGTAGAAGAGCTAA----------CATG---AGTGGGAA------------------GCCTAGTCCTCAAAATTTCTGCCATTTGTTGACTTGTAGAGCATGCTATATACCTTTGCTCCTAGATTCTTTTGTT-----TCCCCgacca---------aaagtaacactggga s bosTau2.scaffold443 394612 1302 - 478372 TATAGGTGCTCGAGTTCTGTTTTGGaaaataattttaaaaataataaaattatGGTGAACACCATTGT-CTATACATGATATTGGTGAGGTTGGTGGAGcaggtggagtggttgagac--agagaaat-gaagtgatttgcacaagatcacatgatgaataaatgacaaagctgtggacACATGCACTCTGATGATTGCATATACATAGAGTTCTCTTTTAAGAACAAGGGAACCTGGGGAGTA---GAGGGAATGACATATAATACTTCCCTAAACCTCTTTTGTGGGAATAAGACATTTAATGAAACAAGAGATTTCTCAGAAAACTCAAGACCTATTACCTAGTTGGTCAATGAGTTGCCTGGCCATTTGGGAAAAAAACTGGATAGACCTGTGCCCTGGAAACTTTCCTACTATTCTGGGAATTTCTAATGGAGTCTGTCTGATGGGGCAGATACAACGCATGAAAGTAATCATCAGTGTTTCCTCTGAATAGCCCAATTATCTCACTGCTCCTCTTCTGAATAGAAATCAGTAATATACATGGAAGGAAAGAAAAAGAGG-----TCAGCTAAGCAGCCTGTTGAACGGCCCACAAGCAGAAAAACAGAAGTTCATGAGAGATTTCCAAAAATGGAATAAATAAAACTCTTTACTCAAGTTAACAAAAGAGTTATTTCATGAATGCTTAAGTTAATAAAAGTAATTTCATAAGTTTTAGAGCTTGGTGAGGGTTTTTGTTT-TCTCCTGAATGCCACTGATTTTGAAATGTCAGTTTATT--GTAATTTTTCTTCCCTGCCCCCTGTATTTTATAAGTAGCATTGTGGCTATCTTAGTGAAACTATGTAAACACAAAGCCAACAAAGGACAAAATATATCTTACAATTTACAGCAAATCAAGCTGTCTT-GTTTGTGTTCCCTGTTAGTTTTCACATTGGCATATGACCCTCATGTTTACATTCTTGTAGCTCCAATACTG--ATAATTTTGTAGTAAAAGTCCTTAGAATACAAGCCTTTGAAGAGAGGTTTGATAATAGATACAACCATGGTCACACCAGAATATTCAGTGGTCCAACGAATTATACTGCAGGACTTTGTACCCTTAAGCAGTGTGCATGGTTCTTCTCTCCAGCATGGGAGGTGTTGGGTGTAGAAGCCAAGCTCAAAATACAAGTGCAGTAGGAATAATGGTGATTGTTACTAGTGTAGTCATTACAGTTGCTGCCCTTTGCTGAGTTATAAAATGAGCTATGTACC-------Ctacattatcctgttaaaccctcccaaccacttactattaaagggatactggta a score=14484 s mm7.chr15_random 2205241 1499 + 7075849 TGCTACCCTGGCTATGTGCTCAAGGTCTATGGGGAG--AAACAGTGATACTTTGAGTATTGGAAAGTTGAAGGTTTTTATAAACCTAGGGATTCTGACACAGTTTCTTCTTttggggagttggggagttggggagttggggagttggggagttggggagtgaggcaaagtattactgtgtttcccgaatggcttgggaattgcaagctttctgcctaagcttcctaagtacttggactacaagtgtgtattactataccTAATTCTGTTGTGAATAGATATATagacagacagacagacagacagacagacagacagacagaATAATAAAACCTAATTTTTGGAAAATGAAGACCAACTTGTGCCCAGGAGTACACATTTACAGTTTACAGCT--GAATAGCCACGTGTTTGTA---CTCAAAAGCCGTAGTGTTCTTGTCTTTCAAATAGAAGGAATA-TCAGACCAGATTTAATACATTAATGTGAAGATTGGGTTATATATTT-----CAAAGAATAATAAAAAACATCAAGCCAACTTTTGCTCTATCTCAAAGATCAGCAAGCTGCA---------------------------------TGAtaaatatacttttatcgtaacacggctatagaaatacctattcattatttattgcctatggctactttctctatataatcactgaattgagaaactgtagcagagacagaatggatctacaaatcccaag-tatttactatttggttcttta---aaaagtATTGGTCAGTCTCAGTGGTATAAATTCAAATTTCATCAACCAGTTGCCAGAAGGCTGAAGTTTTCGACAGGCAATAACAAGAGCAGAACTACATCTTTTGAGGACTGTTCATCTGA----------CTCTGGTCAGTTTGTTCAAGAGATCTGTAATAGAAGCCCAAACACTTGACTTT---CTTGCTCTGTGGTCTAACA---------------------GCAAAACAAGTATGCTTAGGGGGCAGATGAA---GACTGAA-----TCAGGTCCTTTATCCCTGCAAA-GTGACTTGCAGATGCTC----ACCACCTTGAATATT-GTTTTGTTACCTGGAAGCAGAAGAAATGAA------------------------------------------ACCTATGGCATTGCCATGGACATTAAAGACATCAG---ACTGGTGACTGCCACCATTGTGCATATTCT-CCTTCCCTGTGTTGGATGAATATTTTGGGAGGTTC-CATGAAAACCTTTGGCCCATAGGAAAGACTTTAAGTACTGAGAAACATGTGGTTGGAGAGGAGAAAGGAGATGGAGAATGGATTCCAGGGAGTCAAGTAGAAAGGGCATTTTTTTTTCTTTAACTGTGGGACCTTGGGAAGGTTGAACTGAACACTGTGGCAGTCTTCAGTTAGTTCGCTAGTCTGTACAGGCTGTGAAGCAGAGAAAGT---CTGGGAGTAATAGCTTCTATGCAGGTCA-AGTGTAGACAAGAACTAAGGGAGGCACTTTTGTGGGTGCCATCACTTTCA------------------TGAAGATTTTGCTTTTGTTGACTGGAGCAGCTGAGCCATTAGACTGCAACAAAATTGCTACTTAATGGGTCTTTTT-TTAcat s bosTau2.scaffold443 396278 1429 - 478372 CGCTGCCCTCACTATGGGTGGAAAGGCTTTGGAGTAGCAAAGGAGGACAGTTTGAATACTGAGGAGTTGAGTGTCCCTGGAGGGCTATAGATTCTGATGCAATTTA-----------------------------------------------------------AAGATATT-------------------------------------------------------------------------------------CTAAGTTAATTGGGGAGAAA-----------------------------AGAAGGAAACAAATACTAACAACAATCCAACTTGGGAAActggaagcctgcttaggctcagggctgtagatacatggttaatagctttgggcctcaatctgtttatctttctctgaaatctaaatttccttgcctttaaaatgaaggtaatacttatacttactttaaagtattaatgtggggattaaattatatatttaatgtcaggtggtaacaa----caTCAAATCAGTCTTCCTTCTATTTcagagctcaacaaattgcagcccaaggcccaaatccattctgcccacagtttttgtaaataaagttttattggaacacagataca-------tcattcactga--attgtccatgg-tggtttctctctgcgacggcaggtgtgag---ctgttgca--------acagtcccacaaagccaaaaatatttattgtctgatcctttacagaaaaagatcg-ccaatctctgTTCCATATGTTCAAATTTTGTCAACTAATTTATAGA-GACTGGTTTCTTATAGAATCAATAACACAAGTAGAGTCATATATTTTGAGATAAGATATTCTGAATTGTTTCCACCCTAGTCAATTTGTTTAACAGATTCATAATTTAAAACCTAACTCTTTACTTAGCACTGGAGATTTGGACCAGcaaaggaccacggatgcattgtggcaaaacggaagggcttctgaagtagaccaaacgggttgaaaaaatccagactctctcctattgcccatgtgactgtgtgagactctctaacctctctgagcctttgtgttgtcatctggaaacatgggtaatgaagtcttaagggttgttgcaagcttacggattgatgtaagaagaatctagaacagtgcctagaacatagtaggcatctggtaagtggtggctGTGACTTCTGTGATTGTTCTTCCTATCTTAGAGTGAGTGAAGATTTTGGGAAGTTTATATGAAACTGCTTAGCCCTCAAGGAAAGCCTCTAGGGC-GATAA----------GGAATAGAGAGAAGAGATGAGGAAC--AATCCGAGGAGTGAAGATGAAGGGACATTTTT--------------GAGGCTTTTGAAATGATGAATTGAGAAACACAGGAGCCTTCAGTGAGCTCGCCTGGCCACACTAG--GTGCATCATAGAAGATGATATGGGAGCACGAGTTCGCATCCATGTCAGAGTGTGGTTGAGAGGAAAGGG-GGTACTTTTAAATCTAAACTCACCTTTGCTTTTGaaaattaacaattaaaaaatatatttttGTCtatttatttggctgctccc----act----ctaagttgtggcatgccggatctttttgttacag a score=31818 s mm7.chr15_random 2207044 635 + 7075849 TAAAGGAGATGCATAA-------GAGAAACATTTGAGAAG------TGGAGAAAACCTACTAGCAAGAGAAAAGCAAACATGAAAGCTTGTAAGTATGCGGTCATAGTCTAGATTTGGAAAGAGGGAGATGCTTTCAGTTTGAAAGACATCATTTCCCTGGGCTGAAATGTTCCAGTTTGTTCAATTTACATAACAAGGCATGTTATACAATGCTTTGCAAAACATATATTAATTGAAAAGGTTAATGTCGAAAAGGATTAATCTCTTCTTCCATAGCAACACAGACCTAATTAAATCTT-CCAGAAGCAGATGGACAATTTTACTTTCCAAATCGAGATATTTATGTAAATATCACTGAACTAATTGATACTCAGCCGAATCAAAGGAAAGTAAACAACACGCTTTCATGGTGTCAACAGTTGTGGGTTTGATTTGCTGCATTAATGACTTCCTGCAACGAGCTATTATCCAGAG-----AAGATTCTAGGATCTAATTTATTTTCCTGATTGTCAGAGTTGCACTGAAAGAAAGTCCTGTTTAAAGGAAG---------TTGCAGGGTGGAGACAGA---TTTGGTCCAGTATGAAGAGAGCCCCCACAAAGGTGCTATGGTTCTGCACAGATATTGGAGACT-TAGAGAAGATAAAGATTAAAC s bosTau2.scaffold443 398087 655 - 478372 TGAAGGACATGTGTGACAGCAGAGGGAAGCCTTCAAGAAGCTGAGCTGAAATAAACCTTC-ATCAAGAGAAA-GTGTACGTAGAGGAGAATAACTGTCCTTTTGTTTTCAAGATTTGGAAAGAGATGTAT--------TTTCAAAGGCATCATCTCTTCAGCCTGAAATGTTCCAGTCTGTCCAATTTACATAACAAGGCGTGTTATACAATACATCACAAAACATATATTAATTGAAAAGGTTAGTGTTGAAAAGGATTAATTTCTTCTTCCCTAGCAACACAGACCTAATTAAATCTTTCCAGAAGCAGATGGACAATTCCGCCCTCCAGATCGAGATATTTATGTAAATATCACTGAGCTAATTGATGCTCCGCTGAGTCAAAGGAAGGTAAACAACTCGCTTTCTTGGTGTCAACAGTTGTGAGTTTGATTTACAGCATTAATGACTTCCTGGAAGGAGCTATTATCCAGAGTAAAAGAGATTCTGGGATCCAATTTATTTTCTTGATTATTAGAGTCACGTGGAGAATGAGCCCTGTTCACAGGAAGTATCCAAGTTAGAAGACTGGGCACAGGCCCCTCGACCCAG--AGGCCAGAGCCTCTATTGAGGAGTGGTGGTTCTGCATGAACATTCGATAATGTGCTGCAGAGGAGGGTTAAAC a score=3689 s mm7.chr15_random 2208309 199 + 7075849 CTTGGTGACAGTATCTGGGGCCTCTGTA-----AACTTGCTAGATT--CCAGCCTTCTTCTTGGGAC---CCATATCCAGTATCTCATTCTAAGTCTGTTTCTTCTAGGGGCCTGG---------TTGTATAGGATGATAGTTAAGACCATATATATGCAAGGAAGATACCTTAGGTTCAA-ATATCTTAATTTCATAGTGAATAGAA-TAAATGGAATA s bosTau2.scaffold443 399826 214 - 478372 CCCAGTCACCACAGCTGGGGGTTTTGTACTCTGAGGTGGCCAGTTTTGCTTGGCATCCTCTGGGGGCTGACTAAATCCTGTTCCT--TTCT----TTGTTCCTTCCTGTGTGCTGGATGAAGGAATTgtgtaggatagcagctaagagcatgcaattttgaggaagagtccttgggttcgatatctcTTTGTTTCCTCATGTATAGAAATAGAAGGAGCA a score=11632 s mm7.chr15_random 2208820 503 + 7075849 TTAAGAAAAATCCAGCCATATGAAAAGCAACCAGTCAATAC-ATGCC--------ATTGATCCTCTG-----TCACCAGGGTGCAGAGTGACCCGTCCCTCCTATAGACCCCTTTTGC--TTAGGGAGAGCCTTCTGCATTCATGTTCTAGCTTT-------ACAGTTCAGCCAGCTGCCTTTTACTTCTTTACAAATGTCCCTGGCAAAGGTTAGATCT-CTGTACCCATTCTTGACTCCACTTTCCAGTGGAGTCAGTGATCTCCCAGGGCAGTCAGATG-ACTTGTTAAGCAGACCCACAATGTCTAGTCTCCAATTGAAATACAATTGCTGTGTTCCTATGGATGTACTTTGCCTCATCTG---TTCTCTG-CGAAGAGCACTTATCTGCCAATTTTTCTGTCATCA-TTATGGGTTTCT-------GACCAAATCCCAGGCTATAATTCTCCCCTTTTCTACCCCCTAATTGACCTTGTCTGCCTCTAATTCACTTGAAGATGTTGTAATATTACAGGCAAGTTCTCTGCCCTTC s bosTau2.scaffold443 400305 524 - 478372 ttagaatagcatcaggcataagataagcaatcagtaaacattatgcattattATGATTGTTGCTGTGATGATTTCTCTGTTTAAGGAGAGACCAGGCTCCACACATGACTCATTCTTCATTCCTGCAGAGCCTTCCAT-TCCGGGCTCCTGCCCCCTCCCCCACAGTTCAGCCAGCTGCCTTTTGCTTTTTAAAGACTGTCCTAGACCTGGGTGGGATCCACAACACCCATT-GGGACTCCGTTTTAAAGTGGAATTGAAGATCTCTCAGG--CGGCAGGTGTATTTGTTAAACAGACTGGAGCTGTCTAGCATCAAATTGAGATGAAATCACTGTGTTACTGGGAACCCGGTTTGCTACATCTGTTCTTCTCTGCCCAGGAACACCCATCCCTCCAATTTTCTGCCATCATTTTTGTGTTTCTCCCAGTAGACCAACTCCCAGAATA-----------TTTCCCTCTCCTTCATTGGCCTTCTCTGCCTCCAATCTACCTGAA-AGGCTGCAGAGAGACAGGCAGGCACCTTATTCTTC a score=35967 s mm7.chr15_random 2212374 1024 + 7075849 aatagaatagaatagaataaaaGATTCAGAGACTAATGCATTTTTAATTCTTAATGAAATGTGGATGGCTCATAGTAGGTTCATGTTAGTGAGTTTTCAAAT-----CCAGGAATAATGTGTGAGACATGGCATTGCCAACTGGAGACACTGCTAAGGAGATCAAGAT-CCTTCTGAATTTTCCAGTCAGCATTTGTGGCAGAGCTTCTGTCTTATTGAAGACCAAATATCTCCTAATTTTTAGCCTCCTACTTAACAGTGGCATCTCTAATCCCCCGCTCCTTGCCTGCTAGGCAGGATTT-AGTG-TAAGCTAGAGTGGGAGAATTGG-AATGGGCTGCCCTTCATCCAGTGTGGGAAGTTATGATCTGGTCTGGCTCATGCATCCATTTCTGGCCACAGCTTGGTAATCTTA-CCCCCAGCCAAATAGACAGACAATGGGACTGATGAAATGAAGATATTCATGTAAATATCACAGCACAAATTGATGCTCAGCTGAACCAAAAGACGGCAAACAGGACAGTG-TGTGATATTAACAGCTGGGAAGATAATTTACTGCATTAACGACTTTTCCAGGCAAGCTGCTGTCTGGAGGACAGAGATCTAGGATCAAATTCATTTTCTTGATCAGCGAAGCTGAATACAGAGGTGACACCTGGTACACAGAGCCTGATGAATCATACAACTCGTAAATCACATGGCCGTGATAGAAAAATCCTGGGTGCTTACACTGGAAGCTGATCTCTTGGAAGGC-AGCTTCCAGAAAAATTTAAGTAGCTTTGTTTTCATTTATCATA-GCTTGAGGGTCTACCATGTATCATTGTGCT-GGTGCTGAGGC--AAGAGATGTGATGCA---------GATTG-----AATGTAGAGGGGCAAAGTCTTAA---------CAAAGCATTGTATAGGCACTTTCTAGGAATGCCCAAAATGGGAGT----AGGTCTAAATG-------CTAATACTGGGTTAGAAATTCTGTAGG---ATCCATAAGGAAGATGAT------------------ATTTAACAAAAAATAAT--GTTGGTCTAGGCA-AGCAAAGAGCATGAGCAGTAG s bosTau2.scaffold443 402965 1084 - 478372 AGTGGAATAGAAGAGATCCAAg--ttcagtgactg-----tttttcatccttagttctcagtgtctgacacacagtaggtccatggaaactgtttttcaaatgaatgTAAGCATTCATTTGTTAGATGTGG-ATTGCAGACTGAGAACTTAAGAAAAGAAGTCAATATGTCTTCTGTGTTCTCCACTTAGCTTTCATGGTGTAGCCTCTGGTTTAGAGAAGAC-AGATGCCTCTAATTTTCTACTGTTCTCCTAAAGGGTGATCTTTCTAATTCCTTACTCTACATCTGTCAGGTTGCACTTCAGTGGTAAGCAGGGCTGGGAAAGCTGGCAGGGGGCTGCCTTTCTCTCAGGG-GAGAATTTACTGGCCAGTCTGGCTATTGCCTTCTTTCCTGGCCACAGTCTGATAATTTCAGCCCTCAGCCAAACAGATGGACAATAGTAGCATTGAAATGAAGATATTCACGTAAATATCACTGAACAAATGGATGCTCAGCTGAACTAAAAGAAGGGAAACAAGACGGGAACACGAAATTAACAGCTGGGAAGATAATTTGCCACATTAACGACTTTTCCTGGCAAGCTGTTCTTGGGAGGACACAGATCCAGGATCGAATTCATTTTCTTGATCAGTGGAGCTGAATGCAGAGGTGACACCTGGTACATGAAGCCTGATAAATCATACA--TTGTAAATCACCTAGCCCTGATAGGAAAATCCTCAGTGCTCACAAGAGATGCTTTTCTCATGGAGGACTGGCTTTCAGTAGGATTTAAATAG-TCTATTCtcattcattacattcttgagagcctactatgcacctctttgctaggtcctgagactaaaaagataaaAGCCACCCGTCTGTGACTGTAATCCATCCAGAGAGGCAGAGTTGTAATTTGGCCAGCACAGGATTGTGTAGAT-CTTGCTAGAAATGTCCACAGTGGGAGTACAAAGGAGGAGGTGATCAGGTCTTGCACTGGTCTGGGAACCATGCAGACGCATCATTAAAGGAGGTGACGCCTGTGAACATTAATGAGCTCAACATAGATGAACAGGTCAGTCTGGGCAGAGGAACCAGCAAGAACAGAAG a score=8980 s mm7.chr15_random 2267344 351 + 7075849 GGGTAGTGAGGATCATTTGCTTAAAATTAGGGAACTAGGCCCCTTTTTCTGAGTCTGGAATGTGTCTTGGTATAGCCCAAGGACAAA-------------------------GAGCTCCCTGACTTAGGCAGGCTTACATAAAGACTGGGCAGCAGACATG--AAGAAACTAAAGGGGATTCCACA--CAGGCAGCTCCCTCTCTCCAGCTA----TC------AGGAGTGGGTGTCTGACCTACTTGTTCTTCACTCATTTCCCCCTTTCCTCC------CATTCTTCCCTTCCTCCCACTTGCTTCCAGTAGAGGTGGGTGGAGGGTGAGGTTGGGATAAACTAGGCAGGTAC---------TGAGGAATGGCCCA-----TGGGAACAGCACTCAACCTCTGTTCCT s bosTau2.scaffold67 906121 401 - 915719 GGATAGGGAGG------TGCCTAAAGTCAGGGGAAAGAGTCCCTGCCCATAAGTGTGGAGTGAGACTGAGTA-GCCTCGGGGGGaaatggccgtggcggccttgtaaggtagaagttccctgtctctggggggtttaaacatgggttgagcagcag-cgtgctaaggaatcagaggggattcctcgggttggaAGCATCGTCTCCACATTTGGGGTTCTGCTGGAAGAGTAGGTGTCTGACCTACTT-TCCCTGACGCATCTCTCCCTGTCCTCCTCCTCTCTTTCTTTCCTTCCTCCTACTTCCATCCAGAGGTGGTGGGTGGCAGGTGAGCCTGGGATAAACCAGGGATACACATCAAAACTTGTGGAAATGACCAGGTTTTAGGTCCACCACCTGCTCTCTGATCCT a score=8168 s mm7.chr15_random 2268377 449 + 7075849 GCATTTCCATTGCTTTGGGGAAGCAATG-GAAAGTGTACTTGTGAATGAGGGATTCACTTTAAGGGGGAATTAAAAGTGTGTGTTTACCTAGACAATTTCAGATGATGGTGATATGTGTTGGCA----------CCTATTTACCACTTTCAGAGACTATGTCTTTGCTTCCAAGGAGA------CTAAAGACTCCTTGTGAGATGACAGGCTTTCC-----TTCTGTCTCTGTGTGGCATGTTCTAGAGTCGAGGTTGGTTTAACCTGACAAGGATATTTTGGTTGAGAATTTTGATATGAATGAAATTACACACCAGGAATCCATGTCAGTCAATTGCAAATTAATTGTCATCCTAGGGAGTTAGTAAGTGCTGTTGAGAGCCAATTCTTTTGTCCAATGGGAATTCACTGTAGACTCTG-----CTGGCATTGCTCTAGACATTTCTGTTACAGAAGGAAAACC---ATTTTGTTTA s bosTau2.scaffold67 907459 455 - 915719 GCACTTCCAG-GCACTGGGGGATCAGAGAGGATGGGTGCTGATCAAAGGCTGGTT---TTCAGGAGAAAATAAAAAGTATGTGGTTTTCTAGGTAGTTTCAGCAGATAATAATATGTGTTCATGGCTTTGCTTTTCTGTATAACCTTGCCAAGGGCATACTTTTTACCTGCAAGGTCAGGTGACCTCAAGGATTCCTTTGTAAT--TAGGACTTCTGTTGTTTTTCCCTCTGTGTGATACCCTCTGCCGCTGGGATTGGATGATTCTGACTTCAATATTTTGGTAGTGAATTTTGCTATGAATG------------TGAAGTCTGTGTCAGTCATGTTCAAACTAGCCATCAACCTGGGAAGATATTCAATATTGATTATAGTTCATCTGTTTGTTTGGTTAGCCTTTATTGGGGACCCAGTATGCCCAGCATTGTTCCAGGC-CTTCAGT-----AAGCAAAATTGAAATTCTGTTTA a score=3355 s mm7.chr15_random 2269560 463 + 7075849 TTATTACGTTAGTTGGGAGATTGGGGTTGA-TATTCACAAGCAGCATATGACTATGG-AACAGGTTTTGATTTAGACTCCTGAATATCTGTTATTCAAGTTCAACTGA---------CAACTTTCTTCTAGTTAATCTTTGAGCAATACGCTGTCAGAGAATGTACCAATTACATGGTAGAGGAA---AGAGAGGCTCAGATTGGAGATA----CATAAGTTTGGGTGCTAAACACTTCTAAAAATCAAAGCAAAGTGGTCCATTCCATTTTTCTAATGATCTGG-----------TCACTCCTGTGTTAT---TGGATGCTACAAGCATCTTTACATCAGAGGTTTAAAACCAAGATGTCAACATGCTGCCTTAGAAGAAACGAATG--ATGCTCCTCAGTGTGGAGAATTGTATTTTACACATTCTCTACTACCCATCAGCCCCTTC-------CTGTGCCTTCAGGAGCTTCT---GGCTACATTTTCCCCATATCAGATCTTC s bosTau2.scaffold67 910590 476 - 915719 TTCTTCTATCAATAGGGAGTTCGAGACCAAATATCCACA----GCAAGGGAGTATGGTAGAACGAACTGTTCCAGAGTCTGGAGGAACCA--GTTCAAGTTCTAGTAAGAAAGTGCACAGTGTGCTCCTAGTCTGTCTTTGAACAAGAGTACCCCAAGGAATTGAC--------TGGGTGATGAATCGAGGGAAGCAGAGGCTGGAGACAGGGCCAGTGGGGTGTGCACTGAGCAC-----------AGAGC---GTGTTTAGCAC--TTTCTCTTGGGGTCTGAGTGCGGGTGTCTCAATAGCATATTTTCCATGGCTGCTCCGGAAAGCCTTTCACTACACATTTAAAATGGTCACATTAACGTGCTGCCTTAAGATGAATGAAAGCCCTGCCCCTGCACTTGGGGGGATGTTGTCCACCCATTCTTTGCTCCCTA-CACCACCTTCTCCCCCACCCCACCTGCCAGACCCTCTCACATCTGCCCTGTCCCCCAGTCAAGCCTTC a score=2982 s mm7.chr15_random 2272508 141 + 7075849 CCCTTTCCTTGCACGAATCAGTAAACCGAGGCACCTCTACAGAAAAC--ATGGTACTATTCATTGCAAGAAATCCTAAGGTTTAGGATTGTATCTCCATTATCT--TTTGAAAGGCATCAA-CAAATAATTGCCTGAATTTGTTGA s bosTau2.scaffold67 913567 146 - 915719 CCCTTCCATTGCACAGATGGGTAAACTGAGGTCCTTAAACAGAAAATAAATGAAATGAATTTTTGCCAGGGATACTGACAGTGAAGCCCTGATACCCTGCATCCTGTTCACAGGTTATCAGTTGAATAACTGCCTTGatttgtgaa a score=21421 s mm7.chr15_random 2273316 1067 + 7075849 gtactgg--gacatataaagtttgtaataccaaggggcctctctttacaatatggTAGTTACCACAGATACA---GAGAAAGCAACTCCCAGTTTCATTTTTCAGGTAATCAAATTAAAGAGCCAAGATAGCTACTCTTCTGTCTGA---CATCATTCTGTTAAGCAACAGTGAAGT--GCTTCAAACAAGACTTTAGGAGTACAGACCTTTTCTGCTTTCTCTCCCCATAATGTAGGTAGAATC--TTTTCCTTCATTTGTAAAGACCCAGAGCCAAACATTTCATTTAGTGCATATTATGTGTTCAAAAAACAGGTGTT----ACATGGGGCAGACTCATAGAGATGCTCACCTGGGACCTGAAATGGTCAAATCCATC-------CTATTTGGGTCTAACCTCTGTAG----------------CTCTGAGAGTTTGGATGGAGGTACCAAGG---------TGGTCAGTATGAGAGCATAGATGTAAG---CCAAGTATTCCTGACCCTCATTT--------CCCCTCCTTCCCCAGAGTTCCTTTGGCTTTCTGACACTCTAGGTTGGCTCTGAGATGAGGACATTTGCAATGCAAAATAGGAGAAGACCTTCGG--------GCTACCCAGGCAGGTGCGTGCATCTCTGAGCTGTGTTCCTTCTATTTTGGGGTTGGCACATCTGCTAGAAATTTCTCAGAG-ATGCACATGCTGTGAAAGGGGCTAGAGA-GCAGAGATAATGGCAGGGCTGTGCAGGCAAATTTATTGTGTAAGTGGAAACATT-AAATATAATTAATGTAACTGCCATCTCATTAGGTAAATCACTCTAGGG-TTCAGGACATATCTTTTTTTTTTTTTCATATAGGCTAAAGCTACAAGGAGCAAGGTGAA-CCATTAACTCAGTGTACTAGCAACATGCCACAGGGCCAGTCAGGGGTCAGATTAAAAAGAGCAGTGTGGAAAGGGGTAG------------AAGCGGAGGTCAAGAGGCAGGAAGCAAGCAGCCTAATTGTAT----CTGTAAAATAATTGGCTTTGATTGGCTATGTGCTCTCTACCTCCTTTCCTTTTAATGTTTCAAGGTATATATCGTGAGGTGACTGCTTCCTGGTATGTATAATGTGGGAGTCCTG s bosTau2.scaffold67 913713 1108 - 915719 gtactggctgtgatccaaagactgtggta-----gggatttaccctgtattattttagtcatcacaggcatatgggaaaaggtaact---attctctttgtgcaaataacgaaaatgaggtgcttcagagttaaatcatctgcctaaacttgtcttttttttaagcagcagaggggttaagatcacacaagtctttgtgagt-cagaattttcctgctttctccccacgaagcacagggaccatcaatccactttcgtgttcgcgtgcgcggtgccgagcgcactatttggcactgagcgtgcactctgtaaatgtttgctgagtaaatgaGACCTGATCCCAAGGAGACCCACCTGGGGCCTGGGAGGATGACATTCATCATTATACCTGCACTGATCCAAACTCTGAAATCTAACAGGactgaatctcaacgaggtcgggtgatggcaccaaggccgtccaggtggtgagcggcagagactagatgcagaagctcaggtgt----gagcctcacctgccccgcccccaccccaccttagtgcttctctgGCTT-CTGA-GCTTT-GTCTGGCTTGGTGTGGAACACATCTGCAATGCAAAGTAGGAGA---CCTTCCACGCTAGCCGCTAACCCAGC-GGTGTGC-CGTCTCCCCGCCAGGCTCCTTCTGTTTGGGGGCTGGCAGTTCTGTGGGGAATTCCTTAGAGGACCCAGAGACCATGAG-GTGGCTAGAGAAGCAGAGATA-TGGCAGGGCGGTGCAGGCAAATTTCTCGGACAAGTGGAGACATTGAAATATAATTAAGGTAACTGCAGTCTTATTAGATAAATAGCACTTGGGATTCGGGGCATG----TTTCCCTTGCAGACATGGGCC-------CGCAGAGAAAGGCAAAGGCGTCAACTTACTACATCAGGAATGTCCTGCTGGGTCAGT--GGGGCTAATTTAAAAAGAGTAGGGTGGAGAAAGGTAGAGAAATAGGGGAAAATGAAAGTCTTGAGAAGGGTCAC-AGTGACCTAATTGTACCACGCTGTTAAATGATTTTCCTTAAATGGTTATATG-----TGTTTCCTTCCCCC---ATCTTTCAGG--AAATTGCATGAAGTACCAGCTTCCTTGTATGTGCACAGTGAAagtcgtg a score=16239 s mm7.chr15_random 2274499 623 + 7075849 ATTCTCTCCAGTCAGATGGttcacagatgaggactcagatgctcatgaactatt-gcttacttgtctgatgtcacagagct-gaaagtggagagGGGTGGGCTCTT------TTCTAAAATATTATTTAATTCCCGTG-GATTCAGAAGTAACCTACAGG----------AGTAGCTAGCCTTTGTGGTATACAAGAGAACTTTGGGGTATGTGAGTGAAGTAGGCATTCTGAC---TGGCAGTGATCACCTCGTGGTTCAAAAAGAACTCCAGTGATATTGGGTACAAGCA----ATTTACTCAGCAACTGCATGGCATTGCCGCCT--TCCTTCTTCCTGTTCAATTACTGTCTTCATTCTCACTTTAGTGTGAATTACTCTAATTAGCTAATATCTTCACAGGTAGCAAAGTGCCTCTTAAGCTTATGGCCTGCAGAGTTCCTTCACACAGGCCTAGAAAAGCAAGCA----GGGAGAGAACTCTTAACTTCCTGGGAGGGGCTCCTGGGCCAGGGGCCAGGAGAT---------------------TGATAC----ACAGTAAAGGCAATCA-GTATTCAAACGAGATGGATAGATTCCAAGCCTTATTAAAATGTGTGACTTTCAACGTGCTAGGTGTTTTCCTCGCATTACTATGTTCTGTTTATTTGAAGGATT s bosTau2.chr14 2902817 656 + 50711261 attctctccagacccat--tttacaggtaagaaactagaggctcggaagatgttaggttacttgtctaaggttgcaaagctcaaaagtggagggattcaaactcaggtctaattctaaaacactgttcttttcccattTGGCTCAAAAATATGATGCCAGTGGACAACTGAGTAATTTGGCTTTGTG------------ACTTTGAGGGGGAAGATCAAGGTAGGCAGGCTGATGAGTGTCCGCGGTGACCCCGAGTTTCAGAAAG-----TTGAGGTGCTTGCAACAAACAGAGGATTTACTCAGCTCCCACCTTAAAATGCCTTCTCCTCCCTGCTCCCCTCCCACTGTTGGCTTCATTCGCACTTTAGTGTGAATTACCCCATTTAGCTAATGTCTTCACACATAGCAAAGTGCTGCTTAGTCTTCTGGCCTAGAGAGTTCTCTGAAGCAGTCCTGGAGGTGCATGCAAGTTGGGAGTAGAAGCTCAAATGGGTGGGAGGGCTTCCTGGGCTGGGGGCCAGGAGATGAAAGAGCAGTTTGCAAAGACTGTTGCAGAGACAGGAAAGGCAAATATTTATTCAAATGAGAGGTTTACATTCCAAACTGTATTTGAATGTGTGACT------ACGCAAGGTGGTTTGCATATGTGATCCAACTCCTTTCAATTAATGAATT a score=9496 s mm7.chr15_random 2280081 628 + 7075849 TGGGTGACATCTGCAATCTTGATACAGAATTCCTGAATATCCTGTACATTCTCCCCTTATACCTCTCATTCATTCTATGGTTTCA-----TGATTATCTGATGCAATTCCTCCATGTTTTGAGATTCTG------------TTGTCTCCTTTACATCTCTTATTCCAAGCTTAGTTGCTGATACAACATGGGCTTTTAGTAGTTAATACGAATTTTCGCTAAATGACTGAGCAGATTCATCATCTATTCATGCCTAGGAAAGAGGTCTACACAGTCTTCGTGGGGACATATATTAA-AGAAGATTGTTTTTTAAAAGTAAAAGGCATAAGTTCATAATTAATTCATG-CCAAAAATAGGTTG--ATCATTGTCGTATAATGATTAACAGCTAAGTCAGTATGAAGGTTTTAACTTTAAGTTCA-TCTGATTCACAGTTGAAGGAAGTTACCAAGATTATTAAGGTTGACATTTTTTTATACTGACCTTATCTTCT-----CTTTTCCTCTGAATGCTGCTTCTCTTATCCCTAGGTTCCTTGCACACCTCTGACTCCCGTCCTATGGGATGTTCATTATCTTCTTTCTTCTCTGGCTAAAAAAACCCATTGTGACTCAGTCAATCCATTTG-AATACCAGGAAGCTATTTATTAGC s bosTau2.chr14 2906346 610 + 50711261 TGGGAGGC-TCCATGGCCCTGGGACAGACTTCCTG-----------TATGATCCCCTTGTAGCACTTACT---------GTAGCACAGACTAATCATCTGTTGTCTTTTCTCCCTTTCTTCAGCTCCTGACTTACACATGCCTGTCTCCCTGGTACCTAGTACCAC---------TGCTGACACATGTGAAGCCTTTAGT---TAGTATCAGCATTTTCAGAATGATTGAACCAGTG----GTCTCATCATGGCCACAAAGGGAGTCTGAGCAGGTGTTGCTGAGATGTTTATAAAGAGAAGCTTGTTTTTAAAAATTAAAAAGTGTAAGCTCATGATTAATTCATGCCCCAAAGCACATTGTCATCATCCTTTTATAAAGATTAATATTCACGCCAGTGTGAGGGTTGCTATTTCAAGTCTGCTCTATGTCACACTTGAAGGTAACTACCCTAATCCTTCACCCTGCCA-CGTCTTGCGTTGTGTTCATCCCTTTGGGGTCTTACCTTCCATCCCTACTCCCTGTGACCCCATG-TCTCAGCACAATCCTGGTTTCCATTTTCCAGGATACTTATCATCCCCTT--CTCACTGGTCAGGGACTCACA-----GCTGAGGCCGTGCTGTTGTAGAACCATCATGACATTTATTAGC a score=12204 s mm7.chr15_random 2332750 659 + 7075849 ATTGCATCCCAAAATTCTGCTCAAGTAGACACATAT-----ACTCACGTCCATCTACAATTAAATATTGCTTTCACTCTTCCTAACTGTGGAGTACAAATGGTTCCAACATATACACAAGT---AAAAAAAATTTATATATCATATAACACCAATAAATAGGCCAA--TTTTTTCTATGATTTTTAAAACAAGATCTTGGCTAAAAAATAAACAA--CACACAAAAGCAGATGGCTTCTCTCTGTAGTGTTT-TGTACCCAGCTGTTTGGCTCTCTTGAATAAGGGTGAGATCTGCTCTTTCTGTGGCACTATTTGGTCATAGAAAGTGGGTATTCTACCTTTT-CCTGCATCAGTAAATCATAATAAGA-AAGGATGTTGACACGGATATCCCAGCCATACTCTGTGTTCATCATATCTAGCTTTCTTACCAACAATGCATCTTTG-----------TGACCTCTTAGTGTTT---TTTTCTGTA--GTGAAACAGAATTATGACTTAGTTTGTATGCCTATT--TCAAAATTTAATCCTGACAAGGGTACCTCTAAGACAACACCTTCCTGTATCCCTTAATTTTGTGCTAGCTATGTGCAGATTAGAGGTAAATGATATACCATGACTTGCCCTAATGCCATGAAGCCCCAGCAATGGATTTGAGCAATAAATGCTGCAGAAGAATGAT s bosTau2.chr14 34881596 652 + 50711261 ACTGTACCTTAAAATTCAGTTCAAGCACACACATATGAGGTATTCTTATCCTCCTGGAACTAAGCATTATTTTCATCCTCCATAATTTTACAGTACAAGAAGCTTCAA---ATACCCATTTCTAAGAAGGAATTCATATTTCCTATCATACTGAAAAACAGGCAAAAGGGTTTTCAATCAGCCCTGAAGCAAGGTCTTGGCTAGAGAATAAACAAATTGAACAAAGGCAGCTGGACTGTCTCTGAAGGGTTTCTCTGGCAAACGGTTCGGTTTACCAGAACAAGAGCATG--CTGC-----------CATCATTTGGGTATAGAAAGTGGAGGATCTACTTTTTGTCTGCATC--TGAATCATGGTCATAGAAGAATGTTGACATGTTAGCAACACTTATATCCT-tcctaatcacatctaccactcacgccaactgcatgtctttaggaaaatcctttaacttctcagtacctcagtttcctataccacagaatgggagctaaACTCAG-TCACACATCTATTTGTTACAATTTTGTCCTAAAA----TAGCTGTAA---------------TATTTGCTGGCCTTGGCAAAACTGATACAAAATTAGACATTAGGAACA-AACATTGCTTTTTCTAGTCCTGTAAAGACCTGGGAATAAAATTGACCAATAGATGCCATAAAGAAAAAAT a score=3326 s mm7.chr15_random 2334001 98 + 7075849 AAATCAAAGCATTT-GCCAAATAT--TTAAATCCACATGA-AAACTCTGGCAGCTGAAATGTTTTATGCATCTCAGTGCTAAGTGAAATTCTGAACATATAC s bosTau2.chr14 34882273 102 + 50711261 AAGGCAAAACTTTTAGCTAAATATATTCAAACCCATAGGTTAAACCTGGGCAGCCCAAATGTTTCATGAATTTCAGCAGCTCATGAACCTCTGAACTTATAC a score=72394 s mm7.chr15_random 2334528 1552 + 7075849 gtgtgtgtgtgtgtTATGTGCAGATGTTTTGCAGAGAAAATCCCTC--AAGTGTAAGCAATCCTCT-TGT-TGCTCAAGACTTGTTTTGATCATGGCTATAC--AGATAAATTCAAGAA---GTTGTGCAACGGG-CACCTCAGGAGGTTGATGGTCTTATAGACTCTAATCC-CACAATACTCCACACCATCATTCTTTTAGAAA--------------GGAAAATAACACATCCTTCATGAAGAAACCGAGGTAGACAGTGAATTCTCTCCCTCATAATTTTTCTTACTAGTCTTTCAGATTTTATAATATGATATGCTCTGAACCTTTTAGTAAAACGAAGGTTTCTCATTTCAGCCTAACTGCTGCTAATCTATTCCAAATGTTAACAATGCAAGTAAGGTCTGGTAACCATCCCTGCACTGAGCTGATAATAGGAGTAGAGCTGATCACCATCTGGTTTGGTTCAGAGTAGAACTTGCAGCCTAATAGTGCAGAATTTGAGTTGGAAGTCCCTTGCATTTCATGAATGCCAC--AAACAGAATTTAAACAAATGGCACTCCCCAATAGACATGAGTCCATATTCATTGCTCTGTAGGTTTGCTAAATATGGAATATCATATTACTAATTTTAGCAAATTCTAGGCTATATAAACAGGCCCAAACCTCTTAACATAAATTATGCCAGAGCTATTTAATGATAATTTA-------CATGGTGATGCCTTTTAGGAGTTATGACAGAAACCCATTTTAGAAATAAAAAGCAAAATTTAAAATTGTGTTTTTCTTGCATGCTTCTCTTCCCAATGCTGCTGTTGTAGATCTATAAAAAATATGTTCTACTGCACCACATCATGCATAAATTAGAAAATCTGATTTACCTACAACTACTAGTGATTTTT-AAATGGGTTGTTGGTCCAGACTAGAAGTGTATCACCAGTCCTTTTCAATTACA-----------------------AATAATTTCAGCAGCAATCTAGATTTAT--ACAAAGGAATCTTTCTTCTAATTATATTAAATTATAACCAGAT-TCAAACTTGTCT-AAGAGTTTGGGAGCTCAGACCATGGATATTTAATAATCAGATccatgttcatcatagtctcattgtattgccaatactttgaattatgcctggcacacagtaagcatctcctaaatgaatgaaGCCCGAGAGACCTATATGGAAATTAACAAGTGTTTGGACAACATTGTTCTACTTTCTTGAAATTTCTGCTCCTTAGCCAGG-GACATTTTCAAAGTTAATCAGAGAATATAAAGTTTTTATAAGCCTGG--ATGGCCTA----GGCCTTTACAAGTATAACATCTACACTGGCAAATTAGCCCTATTTCCTGCAGATTAATTACTCAATTATTTATGTATGTACTCCATCTCCAA---ACAAAAGC----------TCAAGTAGGAGAGATAGTCCTCCTTCACAAACTTATTT-GCTGTGTGTTGACACATGTAC-AAATATCACCAGATGCTCTCTTTATCACAAGAAAACAAAAATTGTATAGGTACTT---------------------------CTATGT----CTAAaggaaaagagcctg---------agagaagacacaagaaacagagagccacttgtttatccactcag s bosTau2.chr14 34882376 1645 + 50711261 GTGTGTGTGTGTGTGACTT-------TCTTCCAAAGGAAACCCCTCCAAACTGCAAATAATACTCCATGTGTGTCTGAGGTCTAGATTGTTCATGGCTACATTAAGATAAATTCAACAGCAGGTTGTGTAATGGGGCACCTCAGGAGGCTGATAGGCTAATAGACCTTAATCCTCACAATACTAAACATTAAAATTCCTTTGAAAACAGCACTCATAAAAGGGAAATAGCACGTCCTACAAGGAGAAACCAAGGTAGACAGTGAGCTCTTTCCCTCATAATTTTTCTTACTAGTCTTTCTGATTTTACAGCATGATATGTTCTGAACCTTTTAGTAAAATGGAGGTTTCTCATTTCAGCCTAACTGCTGTTAATCTGTTCCAAATGTTAAAGTTTTAAGTAAGGTCTGGTAACCATCGCTGCATTGAACTGATAATAGGAATAGAGCTGATCACCATCTGGTTTGGTTCAGAGTACAACTTGATGCCTAATATTGCAGAATTTGAGTTGGAAGTCCCTTGTATTTCATGAATGCCACAAAAAAAGAATTTAAACAAACAGCACTCCCCAATAGTCATATGTCCTTATTTATTGCTCTATAGGTTTGCTAAATATAGAATATCACATTACTAATTTTGGCAAATTCCAGGGTACATAAGCAGGCCCAAACCTCTTAACATAAATTATGCCAGAGTTGCCTAATGATAATTTGAAAAAGTCATGGTATTGGTTTTCCAGAGTTATGACAGAAAACCATTTCAGAAATAAGAAACAAAA-TTGAAATTGGTTTCTTGTTGCATGCCTCTCTTACCAATCCTGCTGCTGCAGATCTAT-GAAAATATTCTTGATTCTACCACATTATGAATAAATTGGAAAATCTGATTTATCTAGAACTACCAGTGATTTCTAAAATGGATTCTTGACTCAAA--GGAAACATTTTACAAGCCTTTTCCAATTCTAAAATGTTCTGTTGTACATATTTCAATAATTCTGGCAAAAATCTAGCTTTATAAAAAAAGGAAACTTTCTTCTATTTATACAAAATTATGACTAGGTATGATAATTCTCTGAAGAGTTTGAGAGTTCTGATGGTGAATGTTTAATgacaagaactacatcaagc-tattcccattatattcccaatattttaaattacatctggcacatag---gagtctacttaatgaatgGAGACCAAGAGACCAATATGGGAAGGAACAAGTTTTTGAATAATAACCTCCTATTGGCTTCAAATTTCTACTCTTCAGTGAGGAGATTTTACAAAAGATAATC--AGAATACAAAGTCCCCATAAACAATGCAATAGCATGCAATGGTCCTTTCGAGTGTAACATCTATATTGGCAGG-AAACCCCAGTCTCCAAAGGCTCATTGC-CATTTATTTAGGAATGCATGCC----CCAAAGTACAAAAGCAAGGCAGAGACACAGTAAGTGACACAGCCCTCCCTGACAGACTTTTTTCTTTATATGGTTGCACAAGTATAAAATATCTCAAGGCACTCCCTCTACTGCAAGGAAACAAGATTTATTTAGGTATTTAAGGATGACTTTCTCAATTAgggcttcccaggtagtgctagtggtaaagaacctgcctgccaatgcaggagatgcaagaaa--------cacgtgtttgaccccttgg a score=29467 s mm7.chr15_random 2336340 1209 + 7075849 tctttgcatagtttttggttgtgggtctccggtgatggcgagtaaggaattgagctataggcatagcagaatgtcattaggaatcattttattgatacatatttgcatagaat-----aattgtat-ttCATTATTATTGTTTGTAGTGATAACTGTTTTTCATAGATTGAAAGGTCTGAATATAAGGCTGAATTTGCAAGACAAAATGTTAA-TCACCAAACATAGTTTTCTACATTTATTTTCAGGCAAATCCATGTTTAAAGGTACT--AAAAGTGGTATAAATGTATCA---------TTAAAGGCCTAC------CAATTTGCTATTTTAAGGTCATCCAATGAATTCTTCTTAGATTATTCTGAGAATCCTCTGAGATTAGGCAGTTCTTT-AACTTCATTTTTATCCTATGCCTTTTAGCTGATCTCTCTGCTCAACAGAGCACCTCTCCTCTTCCAGCCAAAAGTCTCACGTCTGTAATGTCTGCTTTTCTTTTAACTGTATGCTTTTTT---TTTTTTGATTTTTATAATTAAGCAA----------GGTTGAGGTCTAGCAGCAAACTTATTTCTCTGTTCTGTTTTCTTGCTTTTCTTTTCAAGTTTCCCATCCCCTCTTTTTCAGACTCTGCACATCACGTGTCAGGAGCCGGGTGTATATTTGCTTTGTCATCCAC-----------------------TAGACATAATTCTGTGGATGGGAGTGGTACCTCTGTAGCATATTATATCTTGTGCCAATAAATCCCCATGGTACCAGGAAAATCCTTGTGTACTGTGATGAAGGTGCCTTCTAAGATCCAAGAAAGGAAACACTATTCCACATCTACA-CCTAAGAGAAACTTCATGTACTTTGTTTTTCTTTACTATCTGACAGCTCTGCACTTTTAGAAGTGAAGCAGAGTTGGATCTGCTTAATGTGTGGAAAGAAGGCAG-----AGATACTCAACAGGGTAAGTTTT---CACTCCCATCCCCACCCCCACATCATTGCTGACCTCACCTGTTCACAGCAGT---ATGATAGAAAGTTAACACA-----------------------GTGATTCAAGAATATTGTACACATTCTAAACTCTCACTGTGCCCCAAATCTCAGGACAGATCTTTTAAAG-----ACTCAATTCTAAAATTCTAAAATTGAGTTTCTTGATAAGAATCTACTTGTCCATGGTGATTGGAAATGGGTTA----GAATGAGAAGTGATATCACTCTACTTGAA-AAGTAAAGTCAAA-TATGTATAATGTAATCTTGGAAATAC s bosTau2.chr14 34884207 1209 + 50711261 TCTCTGCCCAATTT-----------------------------------TTAAACTATATTAATA--ATTATGTCATT-----TCATTTTGATAAGATAGACCC-TGTAAAATGTCCCAGTTAAATATTTATCAATATC-----TAATGGCCAGTTTCTTT----GGTTAAAAGACTTAAATGTAATCAAAGATTTGCAAGGCAG---GTGAAGTCATCTAATCCAACTGTGT-CAATCATTTGTAGGCAGAATGATATGAAAAAGTAGCAAAAAAAAGATATGAATGTGCTGCTCCTAGTTTTAGAGACCTCCATCCCTCAAGTAG--ATTTTAA---CATCCATTGAATGACTTTCAAAGAATTCT--------CCTAGAATCAGGCAGTTCTTTAAACTTCACTATCTTTCTATACTTT----CTGGCCTGTCTGCT-AAAAGAATAGCTCTCATCTTCTAGCCAAAG--CTAATGTCTATGAACTATG-GAATGTTTTGTTTGTTTGCTTTTTTCAACAGTACGATTTCCATAA-TAAGAAATCACACCATTGGTTGGGGTAAAATAGTAAATTTATCTTCCTGTTTCTTTTTTTCTCCTTTCTTTTCAGTCTTCAAACTCCTTACTTTTTAGGTTCTGCACATCATACCTCTGAAGCT-ATTGGGCATTTGCTTTGTCACCCACAACCCTATTGTGCAATGCTTTATCAAACATAACTCTATATATAGAGAAAGTACCACTGTGGTACATCATAACTTGTGCCAATAAATCCCCACAGTATCATCAAAATTCCTTTGTACTGTGATGAAGGCGACTTCTAACAGCCAAGAAAGGAAACACCGGTCCACATGTGCATCTTAAAAGAAACTTCATGTACTTTGTTTTTCCTTTCCATCTGACAGCtctgcaatctgggaagctaagcagaattgggtctgcttagtacttgaaaagaagacagtttgagaatacccagtactgcaggctttATCTTCTCCCACTCCTATTACC-CAT--------ACCCCACCTGCCCAGAGCAGTGCAGTGGTGGAAAA--AGCACATTGAATTCCAGATAAGCAATAATGTGTTTCAATAACTTTCTATGAATTACACACTCTCATTGTGCCCAAATTCTCAGGACAAG--TTTTAAAATTTTCTTTCATCTCTAAAAGTCTAAAATCAATTTTTATAGTAAAAATCTATT---------TAGTTAGGAATGGTGTATGCTTACTGAAAGGTA-----ACTAAACTTGAAGAAGTAGAATAAAGTTATGTAT-GTGCAACATTCAAAATAC a score=2831 s mm7.chr15_random 2338045 67 + 7075849 TCAAGTGCAGCATTCTGCTTGAAGCCGAGTTATAACAACCTT-AGTAAATT--ATCTTCTGGA------ACTCAGT s bosTau2.chr14 34886663 76 + 50711261 TCAAGTCTAACATTCTGCTTGAAGCCTAATTGTTATAATCTTGACTAAACTCGATCCTCTGAATATTATACTCAGT a score=3911 s mm7.chr15_random 2342622 280 + 7075849 AATACAACAATTATGAAAGCTCATTTTTGCTAAAGTATCTTTATAAGATGTCATAAAAAAACCAGAAAATAAGCTTAAATACTTGAGGTATCAAAATCATGCAGTATTATGAAAGAGGTTATTTGTTCAAAAAGATCA-GAAGTAACCTTCTA-ATCAGTAGCA-----CATAAAATCTATTACATATAAGA------------TTTTAAGATT-----------CTTTTATTATTTCAG---AAAATTATGATTCATA-----------------------------------------------------ATGTTCTATCACACAAGAA-AACCACTACCAGACTTTACTGAACAC---------------------------------------TGCCATGGA s bosTau2.chr14 34919360 391 + 50711261 AATAAAATAATTATGAAAACT----TTTCACAAAATCACTTTGTTACATGCCATAGGAAGTTT-----------TTCAATTCTTGAGTTTGCAAAATCATATACTATTGTGAAAGAGATCATTCGTCTGAAAAGGTTAGGAAATAATTATCTATATCAGTATCAGTGGCCCCAAAGTGTATTCCTCAAAGAACTTGCATAGAATTTTTAAAATTTAAGAATAATGCCTTTAATGTTTTAGAAAAAAAAAATGATGCACATTTGGTTCAGGAAGaacactgaaaatgacaagaagaaactagaacatctacctatattccagcacccaaaaataatcattgccaactttgattgaatattCATATAggcaacccactccagtacccttgcctggaaaatcccatgga a score=6674 s mm7.chr15_random 2342913 324 + 7075849 TCAAATGAGCAGAGATAAATATTTTAATGAATGAGC------ATGattatttaaaataaaa--aaata------GAAATAGAAGACAATAGTAAAATTTAAACCAATTAA---TTCTCCTCCATA-AAACTATGGTCAGTAAATC----ATTTTTCTAAGATAAGGGAAAAAAATGTAAGAA---TTGATGTCACTTTTGAAATCATGTATTTTATCTTTA--------------AAAGAAAG---------CTTGTCACAT---------------------ACTTAACAC-----------------TCTCTTTAGAT--------------------TTTCTTTAGCTGTTATAGTCTATAACAAAAATCCCCAGTGGTTTTAGTTGTATAT---TTCCAAAGTAGTAGTAATAAAGATACTG--TCACAGa s bosTau2.chr14 34919860 421 + 50711261 TCAGATGAGCAAATATAAATAATTTCAGGAAAAAATGGGATAATCATGATTTAAAATTAAATTTAACATTTTTTTaaatggaaggcaatactgaaattc------attaaagtttcaccttcacagaagatatggttactaaataaaagatctctctaaaggtaagaaaaaaaatataaaaatctttgatgtcactttcaaaactatgtgttttgcctttatacggtctctttacaatgaaagattaaatacattatcacatttttccttgcacctagtctccaccctacactaatttttgttgatttttctctttagaccatcaaagcttatgtttatattttgtttgtttttat--tttgtaacaata------agttgccttagctctatatttaTTTTTAAGTAGAAGTAATGAAGATATTGCATCATAGA a score=5433 s mm7.chr15_random 2343786 234 + 7075849 TCACAAAATTTCCCAACCCTTAGTTTCATTATCGTTTGAAGGTGC--TGCATAAGCATTC--AGTTATGAGATGCTGGACTTTCACTCTTACATTGACATCTTGGAAAGTTGATTAGTGATTTAAAAAAAAAAAAAGAAGAATTTTCTTTCTTATTGACTATCTTTCATACTAAAAGA-AAGCTCCTTGAGGGCAAAATCTAAGAATGAGATCATTATctgtggctccattttccactt s bosTau2.chr14 34920854 223 + 50711261 TTACAGAATCTTCCAATCTGCAGTAACATCTTCATCTGAAGCTGTAGGGCACTAACATACTAAGTCATTAGGCAATAAGAATT-ACTCGCACATTGTTCTATTGGACAGTT-ATTTGCTGTTTACATGATAACA--------TTTTCATTCTTATTCATTGGCTTTCAAATTGAGTTATAAATTCCTTGAAGGCAAGATCTAAATATTAGATTATTGT------CTCCATTTTCCCTTT a score=40619 s mm7.chr15_random 2344627 1721 + 7075849 AAAATCTACAAA-------ATTACAATGAAAATAAT-------GTATATACCTAAGCATTAATTCTT-------TATATTAAGGACCCATATTAAA---GTGTTTCTATAGTCTTGATTGC-----------TCTTGGGATGCCTGATGATAGTCTG-ATGATGATCAAA-----CAGGGCTATGTAGTAGACAAAGCCAAACTTGTAAAACTGGATT--GAACAATATATGGTAAATCTAAAACAAAAT----TTATTTTTAAGAAAAAATCGCAGACTCTAATAAATTAACTGTCATTTCCTATCTTGGTTCTTTCATTATAACTGAAAGCTGA-ATTTTTAAGATAGTTTATTTAGATTTTCAGTTGCagttgggtgatatagcaacacgcgtgtaatcccagcccttgggaagctgagggaaaaggatcgagcattcaaagttaggtttggtgatagggaaaccctgccttaaaaaTCTGAAAAAGGTTCCCCTTGTTTAAAGTAAATGATGCATTATATGATATTGATGAT--TCCTCTTCAATAAGCAAACAAAATTCAGAATTTCCATATGGACTAATTCCCCATATTAAAATTCCAATTAAAAGCCAGTGCCCTGTCAACTGACAGAGTACAGT-----GTTCTTGATCTCCTGGGTTTTTATATTATTAGAAAAGCCTGCC---------------TCATGTATAG-------AACAAGGGAACACGACTGCAGCTACATTTTGTGTTCTTGGAATGAATCAATGCAAGTAACGAGAAGCTTCAGTTTCATTGCCCAGAAGTCAAGTTTAATATGCTTTCTTT--CCCCTTCTCTTCAACTGGCTGAAATACAAGTTCCACTGCAAATGCAACAACCAGCAAACACAGATGCCATCATAAATATATTTTG-TGCCAAGCAGAAAACTCTGCACTGACGAACAACAGAGCTCCCCATGGCAACTGCAAGAGACTCTGGGTACCA----TAAAGCCATAAGGCAATATTATAAATAAAATGTATATATCCTTTAGAACTAAAACATAAATTTGGGTTTAAAGGGTTTttttgttttgttttgttttgttttAAAGCCACTGACATTTACTATAACTTAGTGGATAATTTTTCTGTCTGGTTCATATTCTTAGCAGATTGGGAAATTT------CATAAATCTTTCACTCTGAATTTCTGCAAAATGTAAGCTGCTGTCAAGGAGTTCCTGCTGGGCTCTAAGCAAAATTTGTCATAATCAATTAAAAATAA-----ACCTAGCCTAT----AACTTTCAAATGTTGCTATTTAAATTCACAGACTGATAACCTCAGTTTGAGTGTTGAGAAGCTTAGCACTTCTTTGCTACTCCTTGTGGACATCAGTTGGCATGGAGACAAAATATGAGGTCAGCACACTTTCCTAAGCATTCTCTTTAGGACAAGTATATGCCTGA-------GGAGAAGGGAAACTGAAAG-GAGACATTCTTACTG--GGAGCTTTTGCATTTGTT---GGTAGAAGACATAGATA-GAGACCACCAGAGAACGAAAGCGCTGCTTCAGCAAGCAACCTGAACTCAGTGTGGCCCATCTTGTAAGCAGTATCATCTGCCCTCAAACATTCCAA----------TCGTGAAGTAAAAAAACTGCGGCTCTTACAAGTGCCATTT----------GTAAGAACTATGAGGAATAGGGATTTTTTTTTTTTTCAAAGATAGAACTGA----GGATTTTGGTAGTTGT--AAGTAGCTCAGGATTCAAATTTTAAAGTTTTTTTATCGATGTTGATGAAATCT----CTATCACAATCTCTAGTATATATTAATGCT s bosTau2.chr14 34921265 1650 + 50711261 AAAATCTACAAATCTATAAATTATAATGAATACAATTACATATGTCAATACTAAGGAGTTAATTCTTGGTTCTTTATATTAAGAATCAATATTAAGAAGGTGTTTCTATGTTCTTAATATTAAAAAGGAACTTCTTGGGACATCTGAAGATAATCTTTATGAACTTCAAATATTACAGGCTCATGTGGTAGATAT----------------TTGGCTTCGGATAAATATATACTGACTTTAAAATGCAGTAGTTTTTTTTTTAAAAAGAAACCTTAGATATTAATG--TTTACTTTTATTTTCTAC--TGTTTCTCTCATAAAAGTTGAGGGAAAATGTTTTTTAATTCCCTGATTTAAATTTTCACTTGTGTT----------------------------------------------AAGAAAAAG-----------------------------------------------AAAGTTTACAAAA----------------------------------TGATACTGATGATAATTTTCTTTGACCAGAAGAAAATAAGCATCATTCTTATA---GCTGATTTCCCATATTAAAATTCTAATTGAAAAGTA----CATGTCAACAGATAAGACATAATATTTTGTTTTTTAACTTTTTGGTTTTACCATTATTATTCAAGTTTATTACAATGCAAATACAGTCAATTATAGGTAGAGTAACTATGGCACATAACTGCTGTTAAATTTGGTGTTCTTGGAATATATGGGTCCAAGTAACAAGAAGCTACGACTTCATTGCCAAGAAGTCAAGTTTAATTTGCTTTCTTTTTCCCTCCCTCTTCAACTGGCTGAAATACAAGTTCCACTGCAAATGCAACAACCAGCAAACATAGATGCCATCATAAATACATAATGCTGCCAAGTAGGAAACCCTACATTGACGAATAACAGAACTCCCCATAGCAACTGGAAGATATTCTGGGCAGCATATTTAAAGTCTTGAAGCTATATTATAAATAAGATACATGCGTCTCTTGTAACTAAA----AAATGTTAGTTTAAAAAA---------------------------AAAAAACCTGACATTTACGATAACTCAATGAGTAATTTTTCTGTCTGGTTCAT-TTTTTAGTGGGTTAAGAAATTTTATTAATATAAATCTTTCATTCTGAACTTCTGT-AACCATAA-CTGCTATCAAGGAGACCCTGTGATGCCTTAAATAAAATTTGCCATACTCAATTAAAAAAAAAAAACAACAAAACCATGAAGAGTTTTCAAACTTTGCTAATCCAATTCTTAGTCTGATAACCT-AATCAGACTGCT--AAAGTTTAGCAACTGAATAGCTCTCCTCACTGATTTCAGTTAGCTTGGAGACAAAATGTGATAACAAAAACTGTTTATAAGAATCCACTGTGGCAATAATATGTGTCAGAAATACATAGGGAAATGATATTGAAAGTAAGACCTCTATTCTGCAGGAATTTTTCCTCTGGATAAGGGTAGAAATCACCTGTACAAGGACGCTAATAAATCAAAGCAATATTTCACTAGAAAATCAGATCCC-TTGTGA--GAAGTTACAAGAAACATCATTTGCCTACAACTGCTTCAAATTCTAAACTCCCTAAAGCAAAAA-----------TTCCAAGCACTATCTACCAACAGACACAAAAGTTAGAAGAGAAAATGATCTTTT---------AAAGTAGAAATAAGATGGAGTCTCAAGACCTCTCAAAATAGCTTTGGTTTCAAATCCAAAATACTTTGTACTCAATTTCATGAAATCTTCCCCCATCACATTCACTATGAAATGTCAGTGCT a score=6641 s mm7.chr15_random 2348134 412 + 7075849 taaaaaaataataCCAACCTAGCCTGCGGGTTCTAGAATTTAAAAAAGGTAAA-----CACTAGGTGGCGTACTTCTACAGGCTTGTGA----AATAGTATAGAACTTAACATGAAAGCTTTGTTATTTCAAACCAATAATTACTAAATTATGAATTTTAACTAATCAACTAAAATT-GATATTTTT----AACATATCAACTATAGA---------------TATAATGCTATTAATGCTACAAAAT--------ATG-----CTGTAGAATAGTCAATATTTCCTTGTGGGAA-------GCTAAAGAATATGATCAAGAATGTGAAGTCTATAGC------TTCCTACCTCAAAATGAAAACAAATATTTTGTTGAAC-ACCTTTTACTGATTTC---TTTAACCTTTAAAACAGTTT-TCTTTCTAATCTTTATAATAATGTTTTTTTGTGTGTGCAGGAATTGGAGT s bosTau2.chr14 34928252 454 + 50711261 TAAAATAATAAAACCAGTCTAGAT----GTTTTTACACTTTAAAAGTTATAAAATTTACTCTAGGTGGCGTACTTCTATAAGCGTGCAGCAAGAAAAGAATACAATTGAAAAT-CATTTTTTGGTATTTCTAATCAGTGACTGCTAAATTCAAAA-----ACTAGTCTAGTGATATTTGATATTTGTTAGTAGAAAATTAAGTTTAAAGTTGCTTAGCTAAATTGGGATATAATTCATGACAGAAAATTTTGTATTATGATTCTCTTTAAACTGGTAAATATTTCCCTGTGTGAAAACTTTGGAGAAATCATATG--CAGAAAAATGAAATATTTAGCAGTAAACACCTACATGGAAAAACAAACAA-TATTGTATTGAACTATTTTTTATGTATTTAAAACTTATTTTTTAAAACTTTCTCTCATTCTAATATTCATTATGAT-----TGCATTTGTGCAAGCAGCAGAGT a score=3396 s mm7.chr15_random 2348767 46 + 7075849 AAAGATGTGTGTGTGTGTGTGTGTACATACACGCATAATATATATG s bosTau2.chr6 32464113 46 + 69624268 AAATATGTGTGTGTGTGTATGTGCACACACACACATAAAATATATG a score=7208 s mm7.chr15_random 2348828 544 + 7075849 CTCACTACCCTGATTCCCCTCATTAATATTTTAATTACAAAAATGATAGGCATCTGTATTCCAGTAGTTTGTTTTAAGTCA----------------CTGAGGGGTTACCAAACAATGGGGCTGTATTTTCTCTGGTCCTCTCTGACCTACGAAGAATGACAGTTAGGCCAGGAAACTGAAATTAGATCCAAAACCAGTTGTCATTTGAGCTGAACATTTGAAAGCAGTGGTTCCTTCTTAGCACTCTGGAGACCTTCACTTTGACTGCCAATTGCTGTGGACAGCCAAAGCTACAAGGGGTCTCAGAAGATGTGGCACAC-TCACCCTTCCATGTAATTCATAACCCATTTGCCTAAGAGGTACTCGAAAATAAATTCAAGTCACAAAGGACACTCAATACTTTATCCCACATTTGATGGGCAGTTCTTAAAATTTCTAATTCATTCTGTTATATAATTTTTTTACTGTTACTGTATAAGCTTCCCTAATAGTGACTT--CCTTGC---TAAAGGAAGTTCACCAAAGTTACACAGTAACTTGATAGAAGTAGA---GAATTTTCTCA s bosTau2.chr14 34928863 479 + 50711261 CACAAAACTTTGACTTCCCTCACGAGAACTGTAGTCATAA------------------TTCCAGTATTTTTAATAAAGTCAGACTAGGGGAGGGACACTGGGGAATTATCAACCAATGGAGCTGTGTTGTCTCCAGTTCTCTCTGTCATACTGAGTATGACACATAGGCCAGTTTAGTGAAACTGGATCCAAAATCAGGTGTCATTTGAGGCCAACTCTTGAAATCA---CTCTATAGTTACCACTCTGGAGAGCTTCAAATCGATTTTAAATTGATGT---------------------------GATATTTTGGTACACATTGTTATTACCTAGAGTTTTTAAAGCACATGCTT--------TTTGAGA--AACCTCAACT---------CTCTTAGTCATTTATCTGACA----AATCGTATTTTTACATAATTCTTATCCA---TGTCATGCAATATTTACGTTG----------------CCTAAAAAGGAATTGAAATTGCAATTAAAGGAGATTCTTAGTAGTTTCTCTCTCCTTTGCTAGTCATAAACTCAGATTTCCTCA a score=6784 s mm7.chr15_random 2349591 326 + 7075849 TTTTAAAATGAATTTTAAATTCTTACAGTTTTTATATTCTTG---TGAACAATAGAGATGCAAA-TATCATACTGGAATTCACTCATTT-------------TTTAATGAAGGTTACTTCTAATTTAGTTTTTGAGAGATATCCAAA--TTTACTATAAGCTGTAC----------AAGAACAATGGCTAAGGAACTC----TGTATTCTTGCTTTCTGCTGTGCTATTTTGTGTGGAGCAGCAGTATTGCATACTATAATACAAAGCATGTATCTTCCCTACATTATGGTGATGATAATATTTTGTTGCAAAAAACCCCTGCAAT-TATGAATGTATATGGATGTGTACCTATAGACCT s bosTau2.chr14 34929494 330 + 50711261 CTTGAAAATGGTTTGTACATTCTTATTATGTTTGTATTTTTATATTAAATAGTAGAGATGCAAATTACCTTATTGGAATTCCATCATTTGTGGCTTAAATGGTTTGTTACAGTATGCTTCTAATTTAACTT----GGGGCATCAAGATCTTTCTAATTAACTGTATTTTTACATTAAGAAACAATGAGTATAGAAGACTTGATTTATTCTTGCTTTCTACTGTGTC--------------------------TACTGCAATGCAAAGCCCATACCTTCTACATCTCATTGTGATTATTACAATTGTGTGCAAAAAAAAATACAAATATATAAATGGAGAGAGATGTATACATGAACATCT a score=91651 s mm7.chr15_random 2351446 4029 + 7075849 ttaaaatttataaattaCTAC-TATTAGCAACAAACTTA-----------------GGCAGGAAGTTATTTTAAAAATACCTTTGAACAATCAAAGGAAACCGCAGGGAG-CAGCCACAGGAAGAACTAACTTTCTTACTACACAAATACA---------------ACTTCAGAGATACATTCATATCTAGCAAGGGAGAAAAGGT-------------GCAGGCACGAGGTTATTTATGTTTCATAATGCTGATAATATAAATGTTTCATAATGCTGGAGATGCAGTAAGTAGGTTTGTATACATAAAACGTATATCTTTATGCTAACAGAT--CGGTGGTGAAAAAGTATCTTCACATGGGCAGCATTAGCTCACAGAAGACTACAAATTTCTGTTCATTGCTCATGAACTTATAAAATGAAAATACCTATAACATGTAAGA------TTAAACACCAAAAACAATTTTCTGGTACAAAGAATTATTTAAACGGTTAAAAGTAGCTGATAATGAAAGTAGTT-----------------------GTCAATATTTTCTGTAACCCCTACTCA-----------------------------------------------------TAGTTGGAGAATAAACAGCCCTGTATA--------------------GACAGCTGCCTGGTGCTTAGCACTCAAATCT-------------------------------TTTCTAACCTATGG--AGACAAGCAAAGTGCTGTTGAAGGCAGAGTACTGGCTATGCACTACTCAAAGAAACAGACAAGAAATTGTAGT-------AAAGAGATGACTATATATAAGAACAGTAATAATATTT----TAAAAAATAGTTTAGATTTT--TCCTTTCCCCT---GAAAACTAAGGAGATCCCAGTGGTTACAAT-ATCCTTGATATTTTTATGATTCTAAATA-TATTATATGTAATTCACAATTAAAAGCTTTAATAACCATAATGTGTAAAAGGGTTAATTCTAAATGTT-TAGCCCATTATTGCCTTTGAGGCATTTTATGGATAAAAATGTCT------------ACATCAAACAAAACCTTCACAGAGCTATCATC---AATTTTAAAGAATGTTATAATTTATGTAAAATTTATTATTAGAACAATTTGAAAGAATAAAAACCTCAACAGCCCACTGAAATGTACAACAAAATCCAGCCTGACACTGTAAAATACTCAAAATAATTT-----------GTTTCTGCAAGCTATATATT---TGTATGTTTCTCCTCACCAACGAGAAGAACTTAGCTGACAAATGAGCTCTACAACAACACACGAA---TTCCAATAAAACAAAA-GAAACTAGAATTTTCATACATGAGTTTAATAAACCAT-GGTTTATTTAATAAGGT------------------------------------GTAGGGGTGATATACGAGGATGGATATACAATCAATAGG-----TCTTAAATCTCTGTCCCATGGATTACCTCCATCTCCCTGCTTCCTAGCAGTACAAGGCAAGCTGAGGTTTAGTTAAACAT--TCTTTATAACAACCT-CTTCAGAGAAAATTAGAATACAAATAGCACTAGATATTTAGTAAATTCAGTCACAGGCCAAAAAGTTCAACTGTGTAGTT-TGAAATCTAACGTCAAATGGGTTCCTGAAACCTCAAGACTGAGTGATCTGCAATGTCTCCAACATGTCTTCAACTGCCTTAAGAGAGTATTTGGTTTCCTTCTTACTTCGACCTGCAAACTAATTAAAAAGGAAAAACAGTTCAGTTAGGTAGGTTCAATTTCATTGCAAAGTTTAAACATCAC-ACCTCATCTTCATATTG----TGCAAGAAAATATTA--TTTATCATTCCTGTGAAATCA--CATGTACTTTACAGTCTG-----AGCGAACTCTGAGTTTCATGGATATTTGCAATAGGGTTTCATCTTCAGTTGAAGTGTACAAATATTTCACTACATACTTGGGTAGTTTAAGCTGATTTTAATTAGCATGATAACCTATAAAAGTTTAGATTGAATTTTAAAACTACCCTA--GGTTCAGACTCCAAAACATTTATG--AGGAACTGAATAACTTAG--ATGAAATTTAAACACACACATAGAGAGAAATAGAGTTGATATTTACTTGTCTAACCTGTAAATGGATGTTTGGAATTTAAAACGAGGTGCACTATACATGCAAA-TATCTTAATTAAACATTTAAAAGTAAAAATGTACAGACTTTGACATTATTTAAAATAGGTCACATTTTTCAAA-----CTTCAGATTTGTTACTTCGCTGGATGAT---------------------------------------------------------------------------AGATACACTTCTTGCCTACTAAGTTCTAATTCACTTTATAAAACT-AATTGGGattaaattttataatgaaaacaaaatatattatatCAAGTCCTAGGTTCCTGTATACAAAAGCAAATTCAGAACATATTAAATTCAAAC-------TCATCCACTGGGGAATCAGTGCTGACTACCCCATGCTGATTTCAAAATGAGCTTTCTAACTGAGCTGGCAATCACCGTCATTTGCATCAGGTCTGATTTAACACAACAGATTTACCCAATAAGTGCTTGTTCCCTATGAGGGTGGGGGAAAGTCTATTA-ATCTGAAGTACTTA-TTTTCCCATAGTTTAAGTATTGATTGAAATGTGGTATTAGCAACATCTAGTA-TTCCTAGTTAAC---------------ACATTTTCCAGCAACTG-TCTTT-----------------TGATGTAAGTACTTAACATTTGATTTACTCTGTGTTTCTTTTC-TTTGGGATGAACTGAATGTGGCAAA-------TGACCTGTTCAG-AAGATGGAATGA--GAGCACAGATTACA------GGAGCACAGGCTTCATG-ACTGGTAACCT-CCTCTGACCT----GACTACA-TTTAGCGCAGTAAATCCCACAG---------CATTAGGTGCTGCGGCTCAGAGTCTATTTGACAGAGGAGA---TAATACAAGAGCATCCTAGAGACAGTG--AGGAAATGCAAGGCAC-----------------------CAGCCTGCCATAAGGCATCAC-AGCCTAAAGGATAGAAATGTTAAAAATAGCAGTGCTGTTTAGAAATTATGATAACAATATCATATTTAAACCTTT--------AAAACTCCTGTTAGCAATTAAAGATTACAGAGAAGGTATGCTT-CTCTTGCAATTATCCAGCTGATAAATTTACCTGTGTG-GCGTTTACC-AGAACAGAAAGACTTTTCTTTTACCACTGTTTACTCAGTATAAGCAGGAATAGCTCTAATCAAAGAATTTATGCATTAATTTTGAGGAAAGCTTTGATGGGTTTGGGGCGAGGGTATACAATATGGTACCACACAGTAATAATTATTCTAATTTCTTTAAGTACAAAGGAATAATAAAAATCTGTGAAGCtttaaaatc--------tatttttaaatataggatt---------------ttaaaattaatatgaaatatatttttaGAAGTAAAAGTATGATTTTTTTCATAATTAGCCATTTATAAA--------TACACACATAGGCTAGTGACACCACCATTGACAACCAGTGCACTTTAGGATAAGCCAAGCTTGCTCATTCATGTCAGAACATATTGAA--AAAGGAGCACATATAAATCTATCATCTCAAACTCTTCATGACATGCAATTATTTCTGTCTATTCTAGAATTATAGAGCAAATGAACTGATTAAGCCAGGATCTCATTTTTTCCCTCAAATCATAATTTAGTTTTCCGTTTTCCAAAGGAACAATAACAGAGCCACATCTACAGTTACATAATAACATATGGATCGCTGACAGGCAAATTT-ACAGTGTAAGGAAGAAGTGCCGATCTGAAGAACTGTCAGGA--AAGTTCATAATAAA-CTCTTCCTGAACACTAAATCGA--TGACTA-TTCTAGTCAACATGCTAGACCAGGTTTCTAATTAAAGGTCAGGCAGTGGTCACATTTTGTTTCATTAAGTGGAAGGGAAGA---AAATCTGATAATAAAACCTCATTTTATCAAATTCTTAAATACTTAGAAAAACACTACAGTAAAGAATATATATTTGCTTTATGCTTTGCACTGGTTCATATGCCTAGATACACATTCCTAAATTTTCAAATGCATCTTAAAATTTTATTTAGTTATAAAAATGTGAG--TCTGAAAGCTATA------CTTCTGATACCATTCACAAATTTTCTATTTATCACAGTTACACTTGTTTGAACACACTAATCATGTCTGTACT-----GTGGATCTTAAAAATTTAACAACAAAACTCAGCAGGAAGAACATTAAAACAACCAAACAATAAAAAACATCATTCTCCAATGTACTGGTGTATTAGTTACCCA---GGATAAGT--GAGAAACTGAGCCA s bosTau2.chr14 34935593 4386 + 50711261 TTGAAGTCTATAAATTATTACGTATTAACAATATACTTAACAAATTAAAAATTTCTGGAAAGAAGGTGTT---AAAAT----TAGGAAAA--AAGTGAAACTAAAGGCTGACAGTTATAAGGGGCACTAAATTATTTATTACACAAATACTGCTGAAGTATACAGTACTCTAGTGACTCACAGAAGGACATTAAAAGGAAAAAGGTAGTGGAATAATATGTGGGCACTATTTTCTTTAT-----------CTGA-------AATGGCTGATTATGTTGAAAATG--GTGAATAAATTCATGGGCAAAATCAGTTTATCCT-GTGATAACAAATATTAGTTAATAGAAAGTATCTTCATAAGGGAAGagttatttcaca--------------tctgcccattatctatggcagaacaaaatgaaaa-aaatacaaaatgaaagaattagactagatgtggagaacaatttgct---------aacagCTCAAAAAATTAAAAT--GCTGATACTGACAATAGTTCTCTTCCTTCAGACTTCTACTTTATCAAT-TCTTCTATGATCTCTATTTGCCCTACTGAGCACAATAGCAAGCATACCAGAGTTTCTGTATTACATTGGCAAGTGATTAAAAATTAAGTGTACTTATATATGTAATATTTTGCCTATTTTAAAAACTGATTTATATTAAGTGTTTGAACTTAAAAGTCTGAATAAAGTGTTTTAACTTTCAAGTTCTATTTTATTGCAAAACACACCAAATACTACTAACAGTAGTGTAATGATTGTTCAA----AAAAGAAAAAAGAAAGAAATTGTAATTATAACTAAGGAGGTAATGAGACATAAGAATTATAA-AATATTTGCTTCTACAAATAGTTTAGATTTTCTTATTTTTCCCTAAAGGAAAATAATTAAGTCACTGAAACTCCTTTCATCCCTATTATCTATGCT-TTCTAAATAGCCCTCTAAATACTTTAGTGTTGAAAG-TTGGATAAATATAACTTTCATAAGGGTTAAATTTGACTATCATAGCATAC-ATGAACCTTAAACCATTTTATAGGTAAAAAAATCTCAATTATGTCCCATAGCAAAATAAAATTTCATAAAATGATAATGCTGAACTTTGGAGAATGATATATTTTAACCAAGATCTATCA---GAATAACATTATAGCATATAAAAT--AATAGCACACCGGAATGTAGAGCAAAATTCAACCTGACACTGTAAGAGAAT-GAAATAATTTACCAGAATTTTGCTTCTGTCAACTACATATGCTATGTATTTCCTACCACACACAAAAAAAGGAGTTAACTAGAAATTAAGCTTTAAAACAATAAATTCACTATTTGAATACAACAAAAAGAATCTAGAATTTTCATATGCAAGTTTAATAAATCATCAGTTTATTTAACAAGGTTATTTATATATCAGATTGTGGTTTAAGAGCAGTTATATATGTGTGATATGAAAAGAATGATGTCTGATCTGTATGAATCTTATTAAATCCCTTTTCCATGGGCTGTCCCCTTCTACCTGCTT---AGTACTAAATGCCATTTCTAGGTTTATATAAACGCGATCTTTACAACTGCCTTCTTAACAGAAAGTCAATATACAAATAGCACTGGGCATCTAGCAAAT-AAGTCACAAACTAGTGAGCTCAATTTTGCAGTTGTGAAATGTAATGTGAAA-GACTTTTTGAAACCTTAAGACTGGGTGATCTGCAGTGTTTCCAACATGTCTTCAACTGCCTTGAGAGAGTATTTGGTTTCCTTCTTACTTCGACCTGCAAACTAATTTTAAAAAAA------TGCAAT----TAGGCTTAATTACAGTGGCAGGTACAAA-ATCACAATCTTACTTTCAAATTGTTAATGAGAGTTAACATTATTTTTATCACTAGCACAAAATCAAGTATGTTCTTTTTCTTCAGTAAAAAATAAACCTGGGGTTTTAAGAACATTTTCATTAAGGAGTCATCTTCAACTGAA--CTACAAAAATTTCCCTGTAAAATTGACCAGTTTAAAT---GTTTAAGTAGTATGATAATCTATAAAAACATATATTTGATTTTCAAACTATCCTACCTTTTCAGACCAAAAAACCTTTATGAAAGAAAAAGCATAATTTAGAAACAAAATT-------GTATTTGTGCAGGAGTGTGGACCATTTCTACTTGTGTGACCTCTAATCaaat-ttttaatttcaaataaagataaaatataaatGTAAAGTACTGTTATTTAACATTTTAAAGTTGTAAGATTT---CTCTAAAATTTTTTACAGTTGGTTTCAATTTTTAAAAAATTTTCCAGTTTTATTAGTTGACTAGATAACGTCACATTTCTATAGTGAAAAGCTATCAAATAAAACTCTATGCTATATGTTGAAGTAATATAAACATGTTTTAAAGAATGCATTTCTAGCTTATTAAG-TCTAATTTATTTCATAATACCAAACTGGGAATGGATTTTACAATGAGAACAAAACATAGGGTATTAAATACTATCTTTGAATATTCAAAA--AAATTCATGACTTACTAAAATTCAATAAATACGTAATCAGTGGGGAAAATACAGTTGAATACCCCATGCTGATTTCAAAATGTGTTTTCTAACTACACTGACAATTCCCATCATTT--ATCA--TTTGACTTAACACTATACATTTACTAGATAAGCATGT-TTCCTTGGAAAGGTAGGGGAAGATTTATTATATCTATATTACCTATTTTTCCTCTGGTTAAAGTACTGATCAACATTTTCTACTAGCAACGTATAATATTTTCAAGTTAACATCCAAGCACTCAGTATACTTTCAAGTGACTGATCTTTCCTTCAGATATCAATGCTGTCTTAAGTACTTAGTGCTTGATTTATGATGTGTTCCTTCTCTTTTGTAATTAACTTAATTTGGCAAACTTCATGTGACCTGTTGAGAAAGATTAAGTGATCAAGCACAGGTAACATCATAGAGGAAATAGGCTTCAGGAATTGCTAACCTGCCTCTGACCTCCTCGACTGCAGTTTAACATGATCATTCTCCTAGTTCCTAAACCACTAGTGTCTGTGGTTGAATACTGATTTGACAGAGTAACTATTAATAAAAGAGATTTCTAGAGGAAATGCCAGGGAAAGAAAAAAACTTCTCATAAGAGTCAAGATCACTTTGCCTTTTATAAGACATTACTAATTTAAGGAATTCAAATGCTGAATATACAGGTCATAATTAGAAACTATG---GCAATACCACATTTAAAACTTTGCCCTTTCATAATTTCCCCTGGTGAGTAAAGGATGTGGA----GTGTGCTTATTATTTCTATTACCCAGTTGATAGAGTCACTTTCACGAGGACTTACCAAGAACAGAAAGCCTTTTCTTTTACCACTGCCTACCCAAAGTAAACAAGAATGGTCCTAATCAGATATATAAAGGTCTAATTCTAAGAAAAAGCATTCTGGG--------GGAGGTACAAAATAGGACA-------------------Ctaattt-tttaaagaaaaataaaaatgaaaaaattatGTAGTGCTGAAGTCATACCAAGTACTTTAACATATAGCATTTTTTTTGGTTTGTACTTAAATGTAAT---AAAAATAATAATAAACACAAATTTGTGATTTTT---AAAATTAGCTTATTTTAGAAAACCACCTACAAAGATTGTCTATCAATGCTAC------TGACTACTGCAATTCAGAATAAGCCAAACTGACTTATCTGTGTCAGAACAAATAAAAAGAAAGTTGGAAATATAAATCTATCACTTCAAATTTTACCTGACATGCAATTATTT-TGTCTATTCTAGAATTATATGGCAATTTAACTGATTAAGCTGGAATCCTA-TTTTTCCCTCAAATCATGATTTAATTTTCTATTTCCCAAAAGGATAGTAACAGGATCACCTCAGTAATCATA-AACTACATACG-------CACAGACAAATTTAACAGAGTACCAAAGAAGCATTTATCTGGAAAATTATTTTGAGTAGGTTAACATTAAAGTTTTTCATGAGCATTAATCAAACTTGCCTGCCCCTACTGAACATGCTAAACCAATTACCTAATTAAAGAACAAGTAGCAGCCATATTCTGTTTCATTAAGTAAAAACAAAGACAGAAAGGAGTTCTTAAGATCTCATTTTCTCTAATTTTTAAATGCCTAGAAAAACATTACAATAAGGAATACTTAT----TATATACTTTATACTTGTTTATATGCCTAG--ACACATCATAAAGTTCTCAATTAGATCCCAGAGATTTAT---ATTACTAAAACATCAATCTCTGAAAGTCATATTGTAGTTTTCCACATTAATCACAAATTTTGCATTTTTTTCAGAGA----TTTTTAAATAAACTCTTTTTTTCATTGTTTCCTGATGGGTCTTAAAG----------AAAACTCACCAGAAAGGTCACT--------CAAATAATAAAAA-----CTTATCAAATTCAAAGGTAAATGATTTCTCCATTGTGATAACTAGGATAAGCTGGGCTA a score=2914 s mm7.chr15_random 2672803 100 + 7075849 agccatcGTACTACTAGCTTCAATATATTCATGTCCTTCATCTCTAAGGTAGTAAATTTTGTCTTTTCCATC--TCTTGTCATAGAACTTTGCACAGTGCCT s bosTau2.chr14 49762586 98 + 50711261 AGCCAGTGTTCT----GCTTTAGTAAGTTTATCTCCTCCACTTCAAAAGGGGGGGATCTTGTCTTGTTCATCATTCCGTCCAGAGACATTTGCCGAGTGCCT a score=17377 s mm7.chr15_random 2673593 412 + 7075849 AGGGAAGACCTGGTTCACTTTGTTTTTTCTGCCACCTGAATAACCATTTCACAG---------AGTGAAGCTATATGAGAAAGGGCCATAGCTGCAGAGGCTTTTGTGGTTAAGCTTGTAGGGTCCCCACTTTCACGAGCTGGAGAAAGGGGAGAGCCAGTGGGGAGTGTGTGTGGTTTGATGACGGTATAATTTTCCTCCCTCTGGGATCATTTCAAGTGTGTTCTACAAATGTCAGGGAACCAATGATTCATCAAGTAGTGGAGTGTTGCTTTTGGAAAAGGGAGAGGAAGTCACTGCTTTGGAGCCCAGTGATAGATTTGCACTAAGGTAAGATCTCATCTCAGCAGAGGGTCTGAAAATTTGGCAACGATTCCCTGCTCTTTTCCAAGCCTGGGAGAGATGCCATGGACCGAGGACT s bosTau2.chr14 49771307 401 + 50711261 aggagagacctCGTTTG--TTGATTTTT--------TGAAAAGCCATGAGCCAGCTCTAATTCAGCTGAGTTAGATGAGAAAGGGAGGTAGCTGCAGAGGCCTCCACTGTTAA-CTGGTGGGCTCCTCGCTTGCAGAGGCTGTAGAGGG--------CAAAGGAGAGAGAGTGTGGTTTGATTGCAGTGTAATTTTCTTCCCTCTGGGAGCGTTTCAAGCGAATTCTACCAATGTCAGGGAAGCAATGACTCATCAAACAGTGGGGTGTTGATTTCGGGAAAGGGAGGGGAAGTTCCTGCTTTGGGGCTCACGGACGGCTCTGCACTAAGGTAAGATCTCATGGCCCCGGTGGGACTGACACGTTGGCAG-GAATCCCTGCTTTTTGCTGAGCTGGGGAGACGCGCCGTGTCCCCCGGATT a score=3372 s mm7.chr15_random 2674005 172 + 7075849 GTGAAGCCTCAATTCCCTTAGGGCATGGAGGAGACAGCCCTTGC-CTCTGTCCTACAGCACTGGGAAAAGTGAAGTTGGAAGAGGATCTGTTGCTTGGGTACTCTGGGCAAAGACAAACTATGGGAGAAATACAGTTGTAATAGAGAATCTTGCCACC----CCCGGCTCTTATCTC s bosTau2.chr14 49771810 156 + 50711261 GCGAAGCCTCGGTCCCCTGAGGGCACAGAGCGGACAACCGCCGCTTTCCGGCCCGCGGGGC--GGCGAGGTGAGGTGAGGAGCG------------------CCTGGGCAAAGGCGGGCCGCGCGGGGAA-GCGGCTGTCCGAGAGACGCCGACCTCCCCAGCCCAGCCCTTCTCTC a score=2523 s mm7.chr15_random 2674956 74 + 7075849 GGAAGCTTCCTGTAGAACTTGACTTGTACCTGGCAACTTGGTTCTCAGCTTTTGGTCTTAGTTGCAACTTGAGG s bosTau2.chr14 49772694 72 + 50711261 GGAGGCCGCCCCTAGAACGCGGCGCGGACATGCGAGC--GGCCCTCAGCTTCCGGCCTTGGTTGCAGCTCTGGG a score=5458 s mm7.chr15_random 2676370 275 + 7075849 TCCTTGGGACTCCGTTG--ATTCCTTAGTCTGTGGAAGGTTGT------AGATGAAA-------------TGTATCATATTGCATGCATTTTTAATTGCTATAGCTAAGTAAGATTTCTGTTTTTAAATGTTTCTAGTAGCTATTAGTACAATGGATTTGTTAAGTAAAAGTGATA-------TTTAAAAAATGATTATAAA-TCCTAAGAGAGTACCTGACACTCACAAATCATAAGATGTATTTAGAAACATATTAAAGGGTTATTTGTTTAATTTTGCATCTTTCATAGTTATAAATGATT s bosTau2.scaffold1299 3792 295 - 259317 TTCATGACATTCCATTAGCATTCCTCCATGTGGAGAAAGTTATTTTTTAAGACAAAACCTTTGGATTTTATGCATCATGCTG------TTTTTTATTGTTATTGTTGAGCAAGATTTATATTTATACATGTTTCCAGTGTTTATTAGTACATTGTATTGGGTTAATAAATGAGTTAATATTTTTTTAATTGAGAATTGTAAAGGCCCAGAAGACTGTCTAGTGTATAATAAGTATTATATGTGTTTGTGAA---ATAAAAATTACAAAAGCTTAATTTCACTCTCCTAGTGGCTGTAAATGATT a score=64899 s mm7.chr15_random 2677085 1520 + 7075849 AGAGGGATTTGGAGAACAGGAACACTAAAGAGGTAGACATGAACTTGTTTGGTGCCCAAGGAAGCACTGAATTAGGGAATCATTTATTCAACAAGTGTTTT-AACACTCGTCTTGAACCAGATACTATAGAGATTGTTGGAATAGAAAGGTGAAAAGACTAGATCACCAACTTCAAACAG----------TAATTATAACACATGACAACATAAGTATTCAAATGGATGTGTGTTCCAAGGGAAGTTACAGTATAAAGACAGCACTTTTTTTTAGCTTTCTTCAGTAGCCTTGGATAAATGTGGCAGAGGAACAGTGTGACTCCGGACTGGAAGAAAGAAT--AGAGGTGGCTCTGAATCAAAATAGAGAATTCAACA------------TTTTACTTATCTTTACATTTCTGGACCC---------------AGAGAACAGAAGAAGGACAAAACCTTGGGGCCTAGAATGAGGTGACAAGAAAGGGAAG---------ACAATGCAATGATGTCAATGCAGG-----------------GCTGAACTTAAAGACTA--TGGCCTCATTCGTGTCCTACACTGCTGTCCTGCTAGCCGAAAAACATTTTTTTTTTTTTTTACATTTGTATTTTGCTAGTAAGCAATTAGGGGAGTTTATACTTCAAGAGAATTGGACTCAATGAATAGATTTACAGATGTCTCTTCTAAGTGCATTCAGGAACTTTAAAGATACAGTGATAGCTTGGTCTGGGGGACAGGGATCTGATGGACAAGCTCTGGGAGGTTTGCTCTTTTCTGGAACCTTTTTGCTCATCTTTAGTTGACAGGATATTTACTTTTCGGCTTAGTTCTCAGGTCAGCCCAATTATGCTTCTCTGTGACACATGTTCTCATTTCACCTTGGCAGACTGGTTTCATTAGAAATCACCCACAGTGGGGGTAATGCTAACATAATATTACTTCTAAACTAGGCACAGTTTGATGAAAGATTTGGATGTACTTGGTGGGTTGCTGTTCCAATTTCAGATATTTTGCTGGCATTCCCTGAGAGTCAGCCAAGAGCTAGGGATGACAGCTAAATGGGCTTTTCATACTCTGAATGTGGTAGTGGAGTTTTAGCCTTGTGATTCTCTTTAAAAACCTTTGGGGCACTGATGATGGAGAGGTCCTGAACTCTACAAAGAAATGTTATTTCAAATGAGTTCTTGCCAAGTCCAAATTCACCAGTTAAAATTTTAAGATGAATTACATCATCTCTCACATTTATACATTGCTTAATCCAATTTGCAATGCAATAGTCCGTGCATTATTCTCTCTTGGACTTCATAGTAACCTCGGGCT---ATCAAGATAACTTTCCTTTGCTTTATCCACTTTATGAattttatagatgag--ctaagtttaaagaaagtaacttgtttgtccataattacacagataattaaatgttttatgaggtctgggaatcaagttggtccacccattcccagtttagtgc---tTGAACTTAATCATGAGGTCTTAC-TGGTAAAACTTTTAAATATACTTTTTGAATAAATGGCATTTCAGTCTTTGCAATAGACAATGTACAT s bosTau2.chr14 49774921 1567 + 50711261 AGAAGGGCCTCGGAAGAAGAGCCACTAAGAGGGCGGACAGAAG--TGTTTGGTATCTGAGGGATGATTCGGTTGGAGAGtcatttattcaacaaatattttcaacaccgattttgtgccagatacaatatgggt-attggcgtccaaagatgaaaaggcTTGATCATTGATTTCCAGGAAATATGTTAATTAATAATTACAAAGAATATGGTACAAGTCAGAATGAGCACATGTTCAAGAAACAGGTAAATCATAAAGAAG-------TTTTGTGTCTTCCTGGGTGAATAAGGATAAACATCATAGAAGAGGTATTTGATCAAAGATTGAAAGAATGAACTAAGAAGGTGATTGGGGTAAAAGCAGAATATTCAAGACGAAGGCTCAAGTCTTACTCATCTTTATATTCCTAGAGCCCATTTTGTAGTGTGCAGAAAACAGAATGACCATAAAATTCTGGGGTCTGGCGGAAGATGGCTACAAAGGGAGGTGGAAGATGATGAAGCAATGAGAGAGAGGAAGGAAACGATGACCATAGCGGCTGAACGTAGAGACTGAGTGGTGTC-TCCCAGTCCTGAA----TGCCATGTCAGCTTGAAGGAGCTGATTCT-------GCCTTTGAAGTTTGCCAGCCTACAGTTAAGAGAGTTCAGCCATCAGGAGAATCTGATTCAATAAACGGAATTACAAATTTTTATTCTAATTACATTCAGAAGCTTTAAA-AGACAATTATACTTTGGGCCAAGGGACAGGCCACAAATTTAAAAGAGTCAGAAGTCTTGATATTTTCTGGAATCTTTTTGCTCATCTTTAATTGAAAGGATATTTACTTTTCAACCCAGTTTTCAGGTCAATCCAATTATGCTTCTCTGTGACACATACTCTCATTTCACCTTGGCAGATTGGTTTCATTAGAAATAATCCATGGTGGGGGTTATGTTAACATAATATTGCTTCTAAACTCGGCACAGTTTGATGAAAGATTTGGATGTACTTGGTGGGTTGCCGTTCCAATTTCAGACGTTTTGCTGGCATTCCCGGAGAGTCTGCCAATAGCAGGGGATGACAGCTAAATGGGCTTTTCATACTCTGAATGTGGCCGTGGAGACTCAGTCCTATGACTCTCTTTAAAAGCC-TTGGGGAATTGATGATTGAGAGGCCCTGAGCTCCTCTGAGAAATGTTGTTTCAAATGAGTGCTTGCCAATTCCAAACTTACCAGTTAAAACTGGAAGATGAATTAGGTCATCTCTCACATTTATGCATTGTTTAATCCAATTTGCAATGTTATGtcacatacatta-tcccattggatcttcatagtcgctctgggttgtagtcaagaacagt----cttactttttccattttatggattttacagatgaggagtgggttgaaagacagtaacttgTTTGTTAGTATTTGCAAAGATAATCAAATG-TTTATGAGGTCTGGGAATCAACTTGGTCAGTTCGTTCCCAGTCTAGGGcttattatacttaaccaggtggttttccttggtaaggcttttaaatttattcatcgaatgaatgacagtccagtcttggcggcagataatgtccat a score=3736 s mm7.chr15_random 2678606 126 + 7075849 CCATATATTTAGGCTGGCTGGCATAATGAGTATAGAAAAGATGC-AAATTCAACAGCTTTGCTTTTTAAAAGTTGAACTTCAGAACATTTTTCTGTT-AGCATGGTGGTGGGTTTGTGGACCCATCAA s bosTau2.chr14 49776683 128 + 50711261 cCACAGATTGAAGCAGGCAGGTATAACGAAGTTAGAAAAGGCACTGAAGACCATGACTTTGCTCTTCAAGGCTTGGACTTCCGTGCATCTTTGTGTCAAGCACAATGACGGCTTTACTGGTTCAGTAA a score=4355 s mm7.chr15_random 2680118 506 + 7075849 TTCATCTAAGATGATTTGTCTTGCAATTCTAATGACACACAAAAGGCTCCATCTTCAGGTTTCATGATACTCAAAGTTGATTGCATGCCAAGTTGCTTTGATAGAATA----GCTAGGGCAGACTGCTGGACTCACCACA-CAATTCTTCAAGGTAGAGTA--CTAATGCCTTCATTGTTTTCTGAAGTCCAAGGTGCTTCATGGGTAATCTTTAGTAGTTATATCTTCCTAACTTATTTCCCTA-ACATACATTATTCTCAA-GTGTCCATAGTGATCACTGAGTCAGGAGGAGTTT-------AACTCCATGCTCAGTCGCAATCCAGCCCTCTCCAT-TAGCTCGCAGGCCTT-----TGAACATG--TCTCTCTATGCTCTATCTAATTCATGATGAGCCCCCTTTTGAAGGCCAGTGGTGATGTTGTCTGTAAGATCATATCAATCTGTTAAAGAGC-TCTAATACTGAATATCAGAATGGGAACC-TTGAAGTCGCTACCATTTAGAT------------------------------------TTTCCAATGC---------------------------------------------------------------------TTCTTATT s bosTau2.chr14 49777158 611 + 50711261 TTCAT-TAAGCCCATTTGCCTCACCCACTTCACAGTACAAAGGAAGATTGGTCTTAAACTTTT-TGATATTCACA-TTAATTGCATCTCAAGTTGCTTTGGTAGAAGACACTGCTGGCCCAGGTTTCTGTACCTGCCACAGTGGTTCTTCAAGGGAGAGCAGTCTGACTCCCCCCTTGTTATCTGCTGCCAGAGA---------GTTGACCATT----GTTAGAGTGCTTTGGTTTCTCCTCATGCAAAGGTGTTATTCTCAAAGGGCTCACAATGGTTGTTG-GTAGAGACAAGCTTGGACGTCAGCAGCAGGCTCCACTAGAATC-AGCTCTCCCTCTGTAAGCAGTGGGCCTTGGCCTTGAACCTAGACTTGTCTATGCTCCATCT------TTGTGAGCCCT-TTTCAAAGGCCTTTGTTGGGCTTGGGT-TGACATCATCCCAATCTATCAGAGAGAGTTTAATGTTGACTATCACAGTGGAAGTTGTTGAAGCATCTACCACCTAAGTgggcttcctaggtggtgctagtggtaaagaactcacctgccaatgcaggagatgcgggtttgatccttgggtcaggaagatcccctggagaaggaaatgtcaacctgctccagaattcttgcc a score=6416 s mm7.chr15_random 2680624 276 + 7075849 CTCTCCATAAACTTTTCTGTCTAGTCAC-----TGCACTATCTTTGGTATAACAGAACCTCTCAGGAGCAGCAAGTCTCAGCAAGTGTCCTCAAATCATTCCAATGCATGTGCACATTCCTTGTCGTTATATCTACAAGAAGGGTATCTTAAAGTACTCTTCCAGGAACTGGGAAGATAAGAATGATTACAAGTTCTTCATATCCCTTCCATAGCAAAACTAAGAATGAA---ATGTTTTGCCTCTTCAGGTACCTAGATATGTCTATGTCCCAGACTATTGAA s bosTau2.chr14 49777886 272 + 50711261 CTCCACGCAAACCTCACCATCTAATCAGAGATGTGCTGTGCCTTTGGCACAGCAAAGAACATCTGGAGGGGC---TTTTGGCAAATACCTCCAAATGGTTCC----CATTAACTCTTGTCTTATCTTCACATATCTAAGAGAGGTATTTTGGATGATTCTTTGTGGGACCAAGAAGTCGAGAGG----ATATGTCCTTTACATATTTTGCCTAACAAAACCAGGAACAAATTCATGATTT-CCTATCAAGGCAACTTGATATACCAGTGTCCCAGACTGCTGAA a score=10940 s mm7.chr15_random 2681086 447 + 7075849 gaaACGGAAAAGACTTAATGTGCCATAAATGTTTGGAGAATTT------------------CTTCATCTTGGCATTTGCCATTATGGATGGA-CTAAGAGAGAAGTCTAACAAACTGTGAAGGAAGAATGAATTTATTCCCATGTACATGTCTGGCCTTTAAATC-CTACCAAAGCTGCATTATGCCCTGCTGTCAGACACAAGGAACAGTATGACTGATCTTACAAATGAATGCTTTA-GAGGGAAGGCAATGGAAAGAATGAGG-GACAGGGAAAAAACTTTGGACTTCTGAGTCCAAAGAAGGACAAAGAGCCTCAGCTCCAGCTGCTG----TAATTTCAGGATTAGTCTGTGACTGATAGGAAAATGCTAGAGCAAGGAGACGAGAGAAACAACTGCCATGACTTAGAAGTCGCTAGGGACAACTGCAGTGAGCTTGAGTTGTAGCTGGc-aaagtttctgagttcaat s bosTau2.chr14 49778158 452 + 50711261 GAAATTGAAA-GCCTTAGTGTGACTTAAATATTTAGGTAAGCCTTCTATACCGAAGTAGAACTTTGTCCTGACATTTGA-ATACTAAATGTATCTAAGAAACAATTCTAAGAAATTATATAGAAATATTGAATTTAT--------GAACATTTGACTTATAAATCTCTGCTCAAGCTATACCTCACTCTGTTGTGAGAGAAAGGGAGAAAAATGTCTTCTGCTA-----GAATGTCTAATAAGGGGATAAAAGGACAAAGATGAGGTGGCAG--AAAAGACAACAGAGCTCTGAGTCCAA-GAAGGATAAAAAGGCTGAACTATA--TGTTGACACTAATTTCAGGGTTGGTCTGCGGCTGACGTGAAAATGCTGGAGTCAATGGACTAAAGAAAGAACTGCCGTGAATTAGAGGTTATCA-GGACAGCTGCAGTGGGC-TGAGCACTCGGTGGCGAGGGCGTTCAAGTTCAGT a score=2868 s mm7.chr15_random 2683341 62 + 7075849 ACATATACCTAATGGGGTTG----------GCAATTAAACACCAGGGCAATTCAGTGCAGAATAGATGGAAA s bosTau2.chr14 49782873 72 + 50711261 ACAGGTCCTTAGTGGGGTTGAGGAGCTCAGGCACTTGAACTTCAGGGCAAATTGGTGCAAGGTAGATGGAAA a score=16353 s mm7.chr15_random 2683450 833 + 7075849 CAGCATTCTTGTTCTTTGCTCTACAAA---GCCGGGGCCTTTGCAGCGTGGGCAAGGGCACCATGATTGCTGAGCAAATATGGACAAGTAGCATTGATTGTTGTCCGAGTTCCCCACTGTGTTCCTTGGAGTCTTTAGTTTCCATTGCC-------ATCTGTGATATTAGGACATTTTGTCTATTTTATCATGAGTCCAAACCGGATATTTCTCACTGTAGAAAAAGCCTTCTTACTGAGCAAAACTCTAATTCAGTT----GGTAATCCCTAATATACCAAGGACGCATAGGTGCATAGACAGCATGGACTTGGACTGAAGGTT---CATGTGGTCCAGGCCAATCTCAGAAGAGCTCTTCATAATCCCATGGTAG---AATTATTATCAAAAGAAG-----------------------CAGGCATTGTAGAGCGAAG---GTCTCTGTGTCAGTGCAGTTCCCC--GACAT-CGTTTAGATGCACTCACAAAACTCCATGAGAGATCTACAAATACCTTAGCG-TGGAAGGCAAAGACGTTGCCTGGCAAACC---GCAGGCCACTGCCAAGGCCACTACAAGCTGTTGCTTGTTCCTTGTTGACTCTCCTAACATTCTCCTTGCAACAAGAGAGTAATAAATCTCTTGCTGGTT----GTCAGATGTTAGTGAGTGTTATGTTTGTTTAAATAAACCCATCGAAGAGCAAGGTTAATGTGTAGCATCTGGAAGGCAAGGAATAGGCTAATTGCTGAGGAGCCAGGAAAGGGTTGAGAGAAGAAGTCAGAGGTCAAGTGTGTCCCAGGGAGCAAGAATGAATAGAGTGGGGCCTTTCCTTGCAATCTGGGGTTGAGGTAATGTTAGTTAAATACTAAACTCCCCTTC s bosTau2.chr14 49782988 837 + 50711261 CGGCTCTCCCGGCCTTTGCTCTGAGCACCTACCTCGGTCTGTCCCTTGAAGGAAATGACCCTGCGGTGGCCCTGCAAGTAAAAGCAGGAGGGACCTTCTGTCCTCTGG--CCTGGACTCTGCTCCTTGTGGTCTCTGCTCTCTGCTTTCCTTGTTTATCTATGACGCCGGCACATTTTGC----GTTGGCAGGGATACATCCCAGAGACCCC-CGCTGCCTAGAAG----------TGAACAAAACCCTGATTTTATTTACAAGTGATTACCAGCAAACT---GGAACACAGCTGCTT------CATGGACTTGGACTGGTGTCTGAGCGAGTGGCGCGGAGCCATCTGA-AAGGCCCCCTCCTTGTTCCGTAGCAGCTAAAACACTGGCGGGAACGGAGACGCGTGTGGGATCCCACAGTTAGAAACTCTGGAGCGTGGACCGTCTCC-CGTCAGAGCAGTCCTCCAGGTCATTCATTCAGATGCGCTGTCAAAGCTGTGCACCTGCCCTGTGGCCGTCACAGCAATGGCAAGAAAAGAGGTTAC-TGGTAAACCCAGACAGGC---TGCCAAGGCAAGCACAAGCAGTTATCCATTTCTTCTTGAC---------ATTCTCATTGCAACAAGTGGGTCGTAAATCTCCTCTTATTTAAATGGCAGATGTTAGAGAGTGTTATATTTGTTTAGGTAAACCTATAAAAGGGCAGAGTTAACGCACAGCATCTGGAAAGTAGGCTATAGGTTAATCCCTTCGGATTCAGGAAGGGATTGAGGAAGGAAGTCTGGG---AAGCACG--CTAGGGATCAAGAATTAACAGAGCAGAGCCCTG-CTTGCAGTCTGAAGTCGGGGCACTGTTAATGAAACACT------CCCTTC a score=3598 s mm7.chr15_random 2684283 171 + 7075849 CAGCTAGGGCCTCTCTTGGTTAGGTGGGAAATTACTCATTAAAGGGACACACTTTAAACAGTGCCGTTGGGTCTCACACACACCTGAAC---------AGACACC-----AGC-TAATACTTTA----------GAACAAAGCTCCATTCCATTAC-TATTATAATCTACACAGTACCTTCTGTGTACCAGCCACTG s bosTau2.chr14 49784777 194 + 50711261 CAGCTGGTG--TCTCTTGATGAAGTAGGAAATGATTCATTAAAGGCTAATAATCATAACAGTGGC-TTATATCTCATATACAGCTGAACTAACGCACTAGACACTGAGAAAGCGTGACATCTTAAGGGAGCTTCAGACAGAACCTCTGCACACCACTTGTTAAAAGTTACCCATTACCTGCTCTTTGCCCGCctctg a score=29015 s mm7.chr15_random 2684726 866 + 7075849 TTCACCTTCTTAGTTGTGCCTTAGTGTAGCTTTCATGGTATTCATTTCA---------------AGAGATGAAGACA----------TCTTTTTGTCATATCCCATGG-----GAACTCAGCCCCATCTTTGGTTCTGTAGCCCAGACTTTTGCAACTGCATT--CTACAGATGGAGTAAGACATCCATCCAAGATCTGTGCACAAGATAGATACATTTTTTTTTTTTCTGCTCAGGGCTGGTCCTTGTCCTTTTGAGGTTAACAACAACCAATGTGT------TTCTTTACCACATGTCCCTGGTTACCAAAGTCAGATGCAGAACCTTGGGCTGCCCTGCAATTTGATCTGGCCCCACTGTGAGATCTTTCCTATCCTTCTGTTCTTTGGTCTCACAGTTTACAAAACAACACTACATCAATCCAGTTTATGCTGGCTCGAGTTCTAAGAGAAAGTACATTGCCTGACATGCAGAGTAGAGAGAAGATAAGAAAGTTAGGTTAAAAACAAACTTTGTGAGAG--CTTTGTTTTGTCACAAGGGACCTAGTCACATGGCACCTTAAAATAATCCAAGT--------CATAGAAATGAAGAGTGGTTTTAAGGGCGTGCAGTATGAATCACCCATGCTCTATAGAGAGCTTTAAAGTAAAGCTGAAAGTGGCTTGCATGGTCATTCT-TCACTCAGGAGTGGTACCA------------ACACTCCTGACGTGGAGCCTATCCAGTGGGATGAGCCAAGTGTCAGGGACTCCACACTT-----CTCTGCCAGCCAGTCACCTAGTAGTTCTCCCAAGCTTGGGGTTTTCCTGATTCCGAGCTAAAGTTTTCCTTTGTCCCATTTTATCTTATTTTTCCTCCTTTATACCCTTGGGTCTCTGACTCATTC---TGGCTTTAGAAGTTTCCATTCTT s bosTau2.chr14 49784986 916 + 50711261 ttcctcctcgaagccgtgctcggtggaagtgttcattgtgtccattttacagacgaggctcggagaagataaaggcactcttcaaagtctttttct-gtgtgccaggatgccagaacccggctttgtct--gatttcaaaggccaggctgtttttactgTTTTGACTAGAGTTGGAATAAGACAGTCATAAAACATCTGCCCACAAGATAGGCATGTTAGTT--------GCTCACGGCTCATCCCTGTCTTTTTGAGGTTAACAACAACCAGTGCGTGTTTTGTTTTTAACCACATGTCCCTGGGTACCACTGTCAGATTCAGAACCCCAGGCTGCCCTGAAATTTGATCTTACCC-AGTGTGGGATCTTTCATATTCTCTTGTTCTTTGGCCTCACGATTTAC----CTAAAGCACATCAGTCCAGTTTAGTCTGGAACACGTTCTAAAAGAAAGCACATTACGTGACACGCTCGGGA-AGAGAGGATAAGGGAGTCAGGATGGAAATGAACTTGGTGAGGGTGCTGTGCTTTGTCACAAGGACCAGGGTCTCGTGGTACTTTCAAAGAACCCAAACAGCCAAACCACCAACATGCAGAGTGGTTTTAAGA-CATACGGTTCGAATCACCCTCATTCCATGGAGCAACAGAAATAGGAGCCGAAAACGACCTGCTTGGCCAGCCTGTCCTTCCGGAGTTTTTTCAGATGGTTCTCTGACAAAGCTGA-GTGAGGGCTCTTGGGTTTGATGAGCTCAGTGTTGGGGGAACCTCGTTTGCTTCCTCTGTGAGTCGGCCACCTAACTCTTCTCACTGCTTGGAGATTTTCCCAACCCCAAGCCAAAGCTTTCCTTCGCTGCCCTTCTTCTCATTGTTCGTCCGGTATACTCATGGGCCTCTGACTCATCCTTTTGTCTCTGGCAGGTTCCAGTCTT a score=3984 s mm7.chr15_random 2688429 197 + 7075849 CTTTGCTATCCCTGTCCAGTTTTGAACTTGTTTCTTGGGCCTGTCTATTACTTTCCAGAGGGAGTACGTTCATTTTCTTTTTCATAAATCC---TGTACTT--ACACGAGGGAGTTTT-----CTTACATCTACAGAACCTGACTCAGCAGATTCTGCCTGAATCGGTGCCACTCAGCTCCAATCATGCTGCCACCAACTACTGGAT s bosTau2.chr14 49788226 197 + 50711261 CTTTGCTCTTCCT-TCCACTTTGGAGCTTCTTTCCTGGGCCTTCTCATCAGTTTCCCGAGCCAATCC------CTGCCCTTCCAGAAATCCTGGTGTCCTTCAGTTCGCTGGAGTTTTGATTCCTTGCGTTCCAGAACCCTGACTCTACAAACCCTTC--AGCCCAGCCCCAC-CGACCGGAATCATACTGCTGCCCCCTGCTGGGT a score=35487 s mm7.chr15_random 2689122 1289 + 7075849 GTTGTTCCCAGCTAGTGATTCAGCCACAGGTCAGAATCGTCCACAAAGCAGTCCT------------CCACACTGAAGCCTTCAGGCTGAGTCGCCTGC-ATGGCTTTTCTCTGCTTTTCATTTGGAAATAAGCCTTTCTCTCCAGTTTTCCAAGCCTGTATGTCTGGCCACGTTCTTGGCGCACTATTTGATCACAGCTTAGAAATTTTAACCTGCCTGAAAAACACTGGGGATGGATTTTCCAGGAATCCTAACTTAGACTTGAAAACAATGTTTGATCTT--GGAAATACTTTCTT---------TTCTCTTTTTGTCCACTGTCGCGCACAAAAGTTATCTCAGTATGCTGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtTCTCTTATGGCATTTGGAGACTGGAAAAGCAATTTCAATTGATT--TGGGGCAGGAAAGTGCCTGCGTCTTTGGTCTGGAAAGTTTTGCCCTTGGTCTGATTGTTTCCAGATGTGATGGGCAAACTCATTATTGATAATGTGGAAAAATTGGCAAAGTATT----AGACATTGCAGT----AGCGTGGACCCCTTATGTGGA----CTGAATCTGGTTCTTCAACATCTGTGCTTCCCACTTCCTCCTCAGTCACTCATG-----TTTTTAACCA----------------------ATTTCTCTCACA---------TCTTTATAGGTGATGGCTCCtgagtgcccactacccatgtgaggcactgcttaaatgatttctggacttcatttatccaaagtgctagaaagct-------aaggtgggt--ataattgctatctccattttaaaga--------caatggt--------gctaaagaacgcacaggtGTCCA-TTGTTCTGGACT-------CAACAAGAACTAAGTCA-------------CTGATGCCAGAGACAGCACTT------AACACTCAATTAACTAAAAGTCTCCACCTTGAAGCTGTTGAAGGTGTCTGCTTGGTGAGGGGAGTGTTTCAAACTGTCTGCACATTCCAGCTATCCAGTCATGGTTCCCATCCCTTCTGGGAGCCTGACACCCATGTGCTTTT----------AGACAAAATCTGGTGTGAGACCGAGAAAACAGCGAA-------------GAGTTTCCTGAACATACATTCCCTACTTCCC---AATGGT---TCTGACTGGTATCT----TATTTCTCAGCAGTGGAGACAAGGATGTACTGTGCTGAAAAGAGTTTTATGACATGCGAACAAAGCAAAGCAAAAACAAAGAAAAAACCCTCTGTGCCTGTAGTCCTCTCTATTGCTGAGTGAAACAAGTGCCAAGGAGAAGAATATGAAGCAATAAAATGTAAAATCTAATATTGAGCACATTCTAG s bosTau2.chr14 49790437 1345 + 50711261 GTTGCACCCTGATAGCGATCTGGCCCCAGG-----------CTCAAAGCATTTCTTTCTCTCCAGAGCCGGGTAGAGCCCTCCATGCTGGAGTGCCAGCTGTGACTGTGCTATACTTTTCATTTGGAAACAAACCTTCCTTTCCAATTTTCCAAGCCTCTCTGTCTAACCATGTTCTTGGCACACCGTTTGATCACAGCTCAGACATTTTAACCTGCTT-AAAAATACTGTGGATGGATTTTCCAGGAAGGCTAACCTAGACTCGAAAACAATGTTTGATCTTAAGGAATAGCTTTCTTTTTTTTTTCTTTTCTTTTTGCCCACTGTCATGCACAAAATATACTTCAATAAACTGTCTAGAgtgtgtgtgtgtacatgtgtgtgtgtgcacatgtgtgtgtgtgtatgtgtgtg------------tgGTGTTTGGGGACTGGAAAAGCAATTTCAGCTTATTGATGGGGAAGCAAAGTGC-------------CTGAAAGGTTTTGCCC-TGCTCTGATTATTCACAGATGGGATAGGCGAACTCGTTATTGATAATGTGGAAGAACTGGCAAAGAGTTAGGGAGAAAGCGCAGTAGTCAGTATAGACTCTTTCTGCGGAGGTCCTGA---TGGTATGTGGACACCCGCGCTCCACGCTCCCGCCTTCGTCTCCTTGGCTGGATCTTTAAGCACTCGGGTGCAGCTGCTGAGGTTGTTACTGTCGCGGGCCCTCCCTCTTTCTGGCTGTTGTCTCTTGAGTGCTCAGGGCCTGCTGGGTGCCCTG-TTCAGCGATGGATGGAGGTCTCT--------GTGCTAAACCTCTCGGCCCAgaggtggggcactagttaccgtctccacggcacggaggggaatgcagcggtatgtctgcggtaagaaac------gtgtccagtggccccgaactactaaggcgccaaggttttagtcaaacccaggagtgtctgactccagaagctgcacttcttctaaccgttcaacca---agctgcctcCACCAAGAAGCCGCTGAAGGTGCTTGCTT-CCGAGCAGGACTTTCCAAATGACCTCCAGATTCCGGCCACGTGGCCGTGACCTCCAGGCCTTTCAGGAG------ACCTGGGTAGGTTTCTCTCTGCGCAGGCCAAGCACAGGGTGAAGCTCGGTGAACGGGGAGCCAAAAGGAAGATGGGTTTAGCAAACCCAGACTCTC--CTTGCCGCGGATGGTGAGGCTGGCTGAAGGCTGCGATGTTTATTAGCAGTGGAGACAAGGATCTGCTTTGCTG--AAGAGTTTTACGACATACTAAGAG----------------------------CTGTGCCTGTGGCTC-----ACTTCTGAGAAAAGCAAATGCCAGGCGACAGGATATGAGTGAATAAAATGTGAAATTGGGTGGAGAGCACACCCCAG a score=17541 s mm7.chr15_random 2795710 614 + 7075849 CTGTGGCTACCACCCACAGAGGAG--AGAGGGGGACCCATGACCTGCAACAAGCTGGCAGAAGCTGGACCCACATTCAG--GTCAGGAGATCTTGGGAA--------------------GTTTTCCCTGCAC------------TGACTTCCAATGTGATGTC--CCATTCAGCCAATGGGGAGCTGGCCCAGACCCTGCAGCAGGCATACCTGCCCAGCGTGTCCTATAGCATCTGCTCCAGCTCCTCTTACTGGGGCTCCTCTGTGAAGAATACCATGGTGTGCGCTGGTGGAGATGGAGTCCGCTCTGGATGCCAGGTAAGTGTATGC---AGGGGTGAG--------CCCCAGGGGCCTCCACT-------GGTCACCCC--GCCTTTTACACTCTGTCTGTTCCTCACCTGCTCTTGTGCCGGTGGACAGACTCAGCTTCCTACTCTa----------------------------------------tcacagaacctccaagtgggaggggacatgagagttcctc------GCTCAATATCAGTATTTCAAAAGCTGCAGTGTGTCCTAGCCTGCCTGTACCTCCTTGT--GTATTTTTTAGTAGTTGCTTGTGACCTATATTCTTTTAATGGTAGCAA-GGGGCCCGGCCTTTGGGGACCGAGGCAGTTAACTGTATGGCAGGTGGTCTCAGCCCCATCAGTCCCTTTTGTT s bosTau2.chr5 20836213 712 + 76426644 CTGTACCTTTCACCTAAAGAGAAACAAGAGGACAGTCTATGACATGGCAGAGA---AAAGGAGCTTACCCTGACTTCAGCTTTCATGAGAGCTTGGGAAAGTTTGGCCAGGTGTGGAAGGTTTTCCCTGCACAGCATCTGGGGCTGACCTCTAAAGTTGTGTGTGCTGTTCAGCCAATGGGCAGCTGGCCCAGACCCTGCAGCAGGCTTACCTGCCCTCCGTGGACTACGCCACCTGCTCCAGCTCCTCCTACTGGGGCTCCACTGTGAAGACCACCATGGTGTGCGCTGGAGGAGACGGAGTTCGTGCTGGATGCCAGGTGAACACAGGCTCAGAGTGTCAGAAGTCTCACCCCAGCTCCCTCTCCTCTCTGCCTCTCACCCCCTACCTTTTCCTCACCTCCTATTCCACACCTACTCCCACCCATATATAGAGACTCAACTTTCTAGTCTAGTGTCTGGATGAGAATTATTCTGTGCTGGTAAGTCTGTATTCCAGgaatctcaaagttgaaaggaaccttaaaattcatcttgcctgcctgatgcccccacctCAAAAGTTTGCATGTGGCCTAACATTTGTGTTGGTATATGTGAGTGTTCTTTAGAAGTTATTTGTGCCTTAGAT--TTTTAATGGCTGCAGTAGGGCTAGGCCT----GGATTGGTGGTTGTGACTGTGTATAAGGTAGCTTCCCTCCCATCAACCCCAATTTTT a score=5137 s mm7.chr15_random 2796617 337 + 7075849 ACATCCTGGCTAAAAGTTTTGATAAAGGCAGAC-------TGGCATGGAAGCC-----ACCA------CCTCCCTCTGC----TGCAGCCAGGAAAG-TTACCCTTCTGGGAGACAGGGAAACCTGCAGGGAGTCCCAAAGGTTAAGTAGAAATAAATGGAGTGAAAAGGAGGTAAAGTCATTCAAAAGAAGGGAACCGCACAGAGGAAGCACTTGAGGCTGAGAA-----GGCCCAGGGACTGCT----CTTTCCCTTCAGCTAGGACGGAG--CTGGGATCAGAAgctcacgagccatatccagcctactgcct---ggttctgcatggaccatgagctactgacgaaggttataacctttggaaatggttg s bosTau2.chr5 20837488 364 + 76426644 ACAGTGTGGCTAAGTGTTATAATAAAGACATGCCTAAAGGTGATACAGGAATCCAAAAACCAGATACTCCCCTCTCTACCTTTTGGTGTCAGAAAAGACTTGCCTTCCCCGAGAAGCTAGAGTTCGTAGTGAGTCATGAAGGTTAAACAGAAAGCCAGGCAAGAAAAAAGAGGAAAAAATATTCAGAGAGAGAGAACCT----GAAGAGAGACAT-AGGCTAAGAACCTAGAACACACAGAATTATAAGGCATTCCCTAGAGCTAGAGCAGCGGTCAGGGCTCACAGTCTC-----CAGCatccaacttgctgcctctgttttttgtgtggcccgtgagctaagaatgttttttatatttttttttaatggttg a score=5406 s mm7.chr15_random 2797211 723 + 7075849 AAAAAAAAAAAAATCAAACGGACAGAGCTTGGGAGAGAAAGCCAGGT--GAGGAACCCTCAAGAACAAATCGGATTC-----------------------------TGACCCCAAGGAAAATTG-CAGAGTAATGAAAGAGGA----------GTGGGTTGTTGGGGAAGTTCCACAAGAA-ATAAACGCTTGAATTCTTCAGGGCTGGGTGGAAGAGAGAAAACATACCCAGACCCAAGAAAGGGCGGTAACAG---------GCAATAAG-GACTTGCAAAACCTGAGGAAG-ACCCGCAGGTCATCCCATAGCCGG--------------------GGGTTTTGATGAACG-AGCT-CTGTGGCTACTAAGTGGCTAATCTGGTTACTGTCGTGGCAAGGATGTCTGTAGAA-GGTGGGGACAGTCACACAAG-GGCAGGTAAGG-GTAAGAAGGCATT----------------------------TGTCAGGTACCCTTGGATGAGGGGAGAGGTACATAAAAATCTGGTGACATT---AGAAACAGAAGTCACAGA-CAGGTGGGTCTTT-AATGGGGAAGAAAATCCAGGGTAACAATAGGCAGAGAAGA-----TTTATTGGAGGGCGAAGAGGGCAGATAATGGATGGACCATGATCCTAGTAAAGAAGGGAGAGCTGGAAGCCAGAGGCCAGCCAGCTGGACACGGCTTTAACTG-GGGGTGGGGGACGATGGGGGTGTTCCCTGACCGCGGGCAGGTTTGCAAACTGGGCAG-----CCGCAAGTTGGCA-GGTGTTCTATTTTATTGCTTCTGGTTA-------CTCATGAACTAGGAAATC s bosTau2.chr5 20838796 807 + 76426644 aagaaaccagatataaagaaagtagagcctggaagagaaaactgggctagagataAGCTCAACAGGAAATGAGATTCCTCAAACTCTCCCACCCTCTACTCCCCACTTCCCTCAGGGAAAAGTGGTAGAATGAGGGAAAAAAAAAATAAAACAGTGAGTTG---GGGAAGAACTGTGATAACAGGAATATTTGAGTGCTTCAGGGCTAGGTGGAGGACAAAGGATCCGTAAGGATCTAAGAA------GTAAGAGAAAACCATAGTAATAAGAGGTTTACAAACTCTCAGGAAATACTGACAGGTCATCACATAGCCTACAGTGAAGCCAGGAGCCACAGAGCATAACTGAAAGTAGCTTCTTTGGCAGTTGACagatca--ctggtaactacagccagaacagtttcagtggagtgatgaggacggaagcttgattgaaaggtaaggcatgaagaggcactaagaaatagcaagaaacatagaatactctttcaag-aatcttggatgaa---agaggaatttaaaagtctggtggctttcaggaggatgaaagtcatggagcgggtgcatcttttaagattgaagaaaattgagtgtatttctgggcagagaggaaaggatcctgtagagtcagagagagggaataaatggatgatgcaagaccccag-----------gggct--cccccaggggtagctcagctgataaagaatctgcctacaatgcaggagac-agggattcgatccctgg------------------gctgggaagataccctggaggagggcatggcaacccactctagtattcttgtctagagaatccccatggacagaggagcc a score=3275 s mm7.chr15_random 2798249 168 + 7075849 GAGACTGCGAGCTTGGCCTTGGGGTACACTTCCGCTCACTGTTCCTCCGTAGTCCTAGTTAAAGGGGATGGGTCAACTCCAGGCTGGGTTGTC-TGCTTCACTGGCCACAGCTCAGGAATGCGGCTTGATTGCAAGATCCCAGCGTTGTGGAAGAGGAAGAGAAGTTAG s bosTau2.chr5 20839941 163 + 76426644 GAGACCATGCAATAATCATATGGGTAAATT---ATTCACT--CCATTCAAGGATCTAGTTGTAGGCAATGGATTAGTTCAGGGCTGGGTTTTCATGCATTATTGAA-ACATAAAAGTATTTCAGATCAAATGCAAGCTCTAAGCTGGGTGGAGGAGGAAGAGAAGCCAG a score=7328 s mm7.chr15_random 2798738 842 + 7075849 AGTCTAATGCATAGTACAACCTTCTCTGGGTCTTCAGCAGCCAGCCACCCCTGTAGACCTC---AAGTCTAGCCTTCCTGACCATA-TTCACACATCTCTGCTT--TAGAAAGGCCTTCTATTCTGGCAAAAGAGAGAGAGATTTTATTTCT---CCAAACTG---ATAAGTCTTTGAAACAAACGTGTTTCCG-AATCCTTTCATACTGGAGATTCCCCCCAGATAGTGGGCCT-------GAGGTCTTTGGAGTCCTAAGTGAGCCCAGT---TCTCCTCAGGTAGGATTCA----ATGGGTCTCA-----GTCTATACATCTACACTGGGTTCTTCCCCACCTTCCCCTTCTGACCCAAC-TCTTCAGCcacacacacacacacacacacacacacacacacacacacTGTCTCTCCCAGCTTCCCTCTCATGTCAATTAGCATATTGCAATACTATTATACA-GACTCAGTTCTCTTCCGTTCCATTAACTCTGAAATACTCTCAAAACATTAGTGGTGGGGCATGGGGGGTGGAGCGATGGCTTGcacggcagctcgaccttcccta----atttcagttccaagggatctggcaccctcttctgacctttgtggacaccagacatgcacacggtacacagatatacaaataggcaaaacattcacgcacacagtgtaaaTCTTGGTTTCCCTTCTCCCTTAGTTTGTTAGGATACGGGTAGGAGTGGTTTCGGTCTCTTTGCTTGAAGACAGTCATCTGAAGAGTTACCCTTTCCTAAGTA-------GTTGGGTTACAATGAGTTCTTTAAGGAATTAAGAATTCGCTGCAGTTGAACTCTTTGGCCGCTTTCACCGGTTCTTCTTTTTtgtatgtgttt s bosTau2.chr5 20840905 692 + 76426644 AGACAAACACATAAGTCAAATTCTTCCAGTTCCTCACCAGCCAGCCTCACCAATA-ACCTCTTAAGGTTTAACCTTTCTGAGTTTAATTCACTTTCCCCTGTTTGCTCTCAAAGTCTTGAACTCTGAAAAACTAGAG---TACTTTCCTTCTGGCTGACACTGCAAATCAGTCTCTGAGGCCGTTGTGTCTCCACAGTCTCTTCCCACTGGAACTTCCC---AAATATTGTGTCTTGGTTTTGGGGCTTTCAGATTTCT--GTGTCCCCAGCCAATCTCCTCAGAGGGGATTCACTAAACGCCTCTCACGGCAATCCAACCACTCCCATTGAGCTCTCTCCCAGCTCTTCCTTCTGCCCTAAAATCCTCAGCCATATCCTCCTTCAC-------------TACAGAGCTTTTGTTTCT-----------TTTCAGGTCAATTAGCATAAGACAGTAATACGGTACACAATTCAATTACCTTCCATTCCTCTAGTTTAGAAATACTCTCAAA-------------------------------------------------------TCCCTATAAGAATTTAGGTGGAAGATATTTAA-ACTGTTTTGTA----TTGAGTACAATAACC----------TAAAGGAATATACA---------------------------------------------TCTTTCTT--TTTATAAAAAGA----------------------------------ATAACCATCT---------TCTTTTCCCAAACATAGTGAGGGTGGGGTACAGCTACTTCCTTAGAAAA--AAAAATTAGCCCCAATTTGAACTTTTGGTCTCTTTCCCTAGTTCTTCTTTTTTTTTTTTTTTT a score=3910 s mm7.chr15_random 2855632 62 + 7075849 TGTCACACTACTGACTAGTAGATGGCATTGATGTTTATTTCAACTTCTATAAAATTTAAATG s bosTau2.chr5 16346572 62 + 76426644 TGTCATACAATTGAACAGTAGATGGCATTGCTGTTTATCTCAATTTCTAGAAAATGAAAATG a score=20879 s mm7.chr15_random 2856002 627 + 7075849 ccATCTTAATACACATATGGAACATT-------CCAGAGAAATGGTAATCATTCTAATTGCAAGAATGTTTTGAGAGAACTATGTTCACATTTCAGA---TGAGTGGTAGTTGTTCCCTCCATTT--AAAAACACATTTTGATTGTCTT--GTTTGTGTGCCTGAAGAATACTGATATGATGACAT---CAAATTATTCCTTTTTCTTTCAGTCCTGCAAATAACATAGTTATGGAACATAAGAGTAACCTTGCTTCAGGCATGCGAGTTCCCAAGTCTCTGCCCTATGTTTTGCCATGGAAAAACAGTAAGTAAAATAGAGGTAAAAGTGTTCTTGCACTTTTCATTGT----AACAAAAACAGTTGGT-TTGATTATTT--TGGTATGTTCAGCCTG-ATGCTGAAAG--------TAGTGTGACTCTAAA--------------------TTGTGTTGAAAGCACCTCACTTACCTCATGGTACTCCTAGGCCTGATTATAAACAAGAAATT-------------------AAGAATATTTTGCagccgggcgtggtggtgca---------------------catcttt--------aatccca---------gcacttggg---agacagaggcaggcagattt------ctgagttcaaagtcagcctggtctacaaagtgagttccaggacagccagggctacacag------------agaaaccctgtc------tcaaaaa-aaaaacaaaaAA s bosTau2.chr5 16346641 753 + 76426644 CCATCTTAATGCCTGTACAGAACAGTGAGCTATCCAGAGAAGTGGTAATCATTCTAATTGCAAGAATGTTTTGATGGAAATGTGTTTACATTTCAGAATGTAGGTGGTGGTTTTTCCCCAAATTACAAAAAACACATTTTGATTGTCTTATGTTTGCCTGCCTAAAGAATGCAAATATGCCAGCATACTCAAATTCATCTCTCTTTTTGCAGCCCTGCAAGCAACATAGTTATGGAACATAAGAGTAACCTGGCTTCAGGCATGCGTGTTCCCAAGTCTCTTCCATATGTTCTGCCATGGAAAAACAGTAAGTGAAATAGTGGCAAAA-TGTTCTTG--CTATGTGTTGTACTAAATAAATACAGTTGGTCTTAATTATTCAAGGACATGTTCAGTCTGaataccgaatgccttgcacccgtatggccctgagagtgagcacctccccagattttgcatcttaagcacatcactcatctcaccctggtcctaaccctgGTTAGTAACAGGCAAGTTCAGGATCACAGAAGCCTAAAGAATATTTTCAAGACAGG-GTGAtggagaaagaaagggcaacccactccagtattcttgcctgggaaatcccatgaacagaggagcctggggtcacaaagagtcagacacatcttagcaactgagcacacgtgcatacTAGT--------TGAGCTTCCTGACAGAAAGCTCTATGCTGTGTGCTCTCATCAGTATTCTTATCTGCTCTTCAAAACTATAAACAAGGAA a score=5007 s mm7.chr15_random 2856817 322 + 7075849 TTAAAAGAGAACGTGCAAGAGCATAAAACCCAAAAGGGTGTGGTTTCCTGAAGTGGGAATGTCAGTGTACTAATGTACTGAGTACACTAATGTCATCCACTGATGTCAGTGTAC-TGAGTAGATGTACAGACCGTTAGAGTAGCTATTAATTTTGGCTAAGAAAAAGTC-------ATTGTCAAGGCATTAATTTAACAA------------AAAAATAGTATTTCGGTAACCTAAAAGACAATGGGTAGGGA------AGAAGAAAAGTGCTAAGAAGCAGCATAGAGAGTAGAGTTCAGGTGTCTTCCCTAAACATCTGAGCCCATGCTGGGTAAAAAGGCATGAA s bosTau2.chr5 16347664 304 + 76426644 TTAAAAAATTACATTTTTGCAAATAAAACTCAAA-------------CCGAGAAAGAAA------------------------AAACAAGGGTGA-CCACTGACATCGGATTCCATGGATAAATTTG-GGACCAATAAAAAGACT----ATTTTAACTAGGAGGAAATCATCCCTGATTTTTAAAGCATAATATCAATAGGGAATTGGGATTAGAAATTGGATTGCAAGGGCCTGAAAGGTAATGGGTAGAGACAAAATGAAAGTAATGTTATAAGAACCAGCATA-AGAATGGTATTCAGATGTCTTCCCAAGGCCTCGGAGACAATGCTGAGTAAATAGGTCTGAA a score=4238 s mm7.chr15_random 2859989 135 + 7075849 ATACCTAAGATTGTATGATCTTTATTTCATCCAGACTGTCT------GGTATTATTCCCAAATCCAAATTTACTTGAGTCCCTTGATTTCAGACTTTGTTACTATT-----TAAATTTTGAGTGAGTAGAATGGATGCCCTTTAAA s bosTau2.chr5 16348012 135 + 76426644 ACACCCAACATACTGTCATTTTTATTTAATATAAACTTCCTTTTCCTGATGTTGCCCCCAAATTCAGATTT---------CCTTGATTTCAGTCTTTGTTGTTGTTTGAGCTAATTTTTAGGTGGCTACA--GGATCCCCTTTAAA a score=3838 s mm7.chr15_random 2860724 103 + 7075849 ATAGGTAAAAGACTATTTTCTTTTTCCATGATTCTCAGTGGAATCCCATTGCTAGTTTTGAATTCTGATTTAAGATTACTACCCTATATATTCTAAAAAAAGA s bosTau2.chr5 16348214 95 + 76426644 ATAGGTGGAAGACTATTTTCTTTTTCCGTGC-------TGAAATCCAGTCACTAATTTTAAATTCTACTTTATTA-TATAATTCCATATACCCCAGGAATAAA a score=28197 s mm7.chr15_random 2861000 580 + 7075849 TTTGTGTCTAGTAAGCACTGAGGGTAGACTGAATTTCAGTCGACATGATTTATCTATTTTGAAATGTTTTTTCTT-GTAGATGGAAATGCACAGTAACTGAACATCTTTTTCAAGTAAGTATTTCG------TTCCACTATCTCTTCAGGTGGTAGCAAGATTTAACTGGACATAAAGCAGTTTGAGTTCAATTTTCTCTCAGATTATGATACCAAATTAAAGCTTTGGATGTGCATGT-ACTTTTTATGAATATAGCCTCTA-TATGGCTTTACATACTAATGAATAGGCATTTACTACTTAAATTAGAATTCTGTTACCATGCTAAGTTCTTTTCCCTGATACTAGTGTGCACTGTtttgtttgtttgtttgtttgcttgtttTGACATTGAAGTTGCAGTCTAGATCTATCCTGCCTTTTGTAATGGAGTAAGATTAATCTAACAGCTGTGATTCACTGATCTGCAATGCTTTCTCAATGCAGTACTGTTTAACTATCATTTTTTAAATCCATATTCTTCTAATTGGGCATTTAAATTTTTGGG---------GTCTCTTAAGAGTCTTGCAATATTGATATTATTTAGTTATTT s bosTau2.chr5 16348312 580 + 76426644 TTTGTGTTTAGTAAGACTAGGGGGTGGAGTGAATTTCAATTGACATGGTGTATTTATTTTGAAATATTTCTACTCCATAGATGGAAATGCACAGTAACTGAATAT-TTCATCAAGTAAGTGTTTCAGTTTTATTTCATAATTTTTTCAGATGGTAGCAAGATTTAACTGGACATAAAGCAATCTGGGTCCAATTTTCTTTTAGATTATGGTACCAAATTAAAGCTCTGTGTGTGCCTTTCGTTTTTTAAGTATATAGCCTCTGTTATGGCTTTACATGCTAATGAATAAACATTTACTAGTTAAATTAGAATTCTGTTA-CATGCCAAGTTGCTCTCCCTAACGTTAGTGCACATTGCCTTTTTCTTTTTTTTTT-------------AATCAAAGTTGCATTCTACATCTATCATGCCTTTT-TAATGGGCTGAGATTAATCAGACAGCTGTGCTTCACTGCTTTGCAATTCTTTCCCTGTGCAGTACAATTTAATACTCA-TCAAAAAATTCATACT-TTTTAACTAGCATTTTAAAGTTTTGGGTCTCCAAAAGTCTCTAGATCTTATTGCACTGTAGATCTTATCTGAATATTT a score=4232 s mm7.chr15_random 2861632 551 + 7075849 AAAATCTCC---TTTTCCCAGATGAAACCTGGAAGCTCTT-------CCCTGTGTAAC----ATAGGGCTAAGCTT------------GGCTGCCTTGCCTAAGATTGCCCAGCCCTACTGCTCATGG---GATAGGGACTTTAGGAAGGCTGGGATAGGATTCT-ATTTCAGCtgtcttgcagatactagtccttcagtgaatgtttatcaaataaatgagtCGTTGGCCTGTTGCTAGCCAGTACCAATCTC----------AAGTGAAGCAGATAAATCT-----GTGGTGGAGTCCATTTT------AAACTAATGTTTTTCCTGATTAGAACTGCAAAAG-----CTAAGTGGAAACACCCagccaggcatggtgtcttagtctttaatcacagcattcaagagagtcagaagtaggagaatctctgagtcaaagaccagcctggtctacagagtgagttccaggacagctagaactatatagtgaaaccctgtctcaaaaataaaaGTTTAAAATAAAGCATTAAAAAATAATAAAAAGAAATACTCTTTAATAATCATTGCTAGAAATTTATCAGTTTCTTCTAGCAATTAGCCACTTTT s bosTau2.chr5 16348930 410 + 76426644 AAAATCTTTTAGTTTTCGTAGATGAAGCCCA-----TCTTTGAGATACCCTATGTACCCACAGCAGAGCCAGGTTTGATGCTTCAAACGGCTGCCTTGGCTGAGGTTGACCAGCCACATGGCTTCTGGCAAAAGAGGAATATTGTTGGGCCGGGAATGGGATGATAATCCCCACTGTCATG-AGatggtaggccttcagtgaatatttattgaatgaatgagtAATTGGCTTGTTGCCTTGTAGT-CCATTCACTTTTTCTGAACAGTGAAGCAGATGGATCTTCTGCGAGCTAGGGTTTGTTTTGTACCAAAACTGATGTTTCTTCTGTTGAGAA--ACAAAAGATATTCTAAAAGCAAACACCC---------------CTTAG-------------------------------------------CTGAG------------------------------------------------------------------------------------------------AACAATAAT----------------------------------ATTTATCAGTTGCTTCTAGGGACGGGCCATTTTT a score=9303 s mm7.chr15_random 2862344 272 + 7075849 ctTGGTAGGTTTTGACTTTAAATTGTTAAGTACATCTGGAAACAAGAAAATGAACTTTGGCCACAGAAG--AAAGATACAC--------TAAGGTGTATCAGAAAAAATACATTGAACAGACCTGGATAAATATGAGGAACTTTGAATTGTTCTCTTAATATGTTGTACAAAATGTCTGATGATCAATACAGTAT--ATAGCTGTTTAGTAAATAAAAAAGACAACTCTATAATGAAAGCATAGGAGAAGCTTCTCATAAGATAAAAACAAAGTGCTTTCTCCC s bosTau2.chr5 16349340 270 + 76426644 CTTGGTAGGTTCTGACATCAAATTATTAAATATATCTGGAAGCCAGAAAATTGGATTTGGTCCCAGAAGGCAAAGAGACGCAACTGCAGTGGAGTGCATCAG-AAAAGCACAC---ACAGACCTGGGTAA--ATGAAGAACTCTGAATCCTTCTC-TGGCACACTGCTCAAAGTGTTTGGTGTTC-ATCCAGTATGGATAGCTACCTATCCAGT------GGCTACTCTATGGTGAAAGCCTAGGAGAAACTTCTTGTCACTTAGGACTAAACACTTTTCTGCT a score=28646 s mm7.chr15_random 2863001 1236 + 7075849 ATTGAGTA-ATAAAGTATTTGAGAGGAAAAATACCAAAATTAAGTTAATTAGAATTTATTTATTGAAGAATTGTTCAAAGTAGTCAGTTGCCTACAGATTCAGTTCTCACTTGAGAAGCTTTTGACAC-------------AGAAATGTACATTAATGACTGTGAAGAATGTTTTTAATTCAATTAGCAAATTTTCATGTACACAGAGGTACTAAAGAGAAGAGGGTCAGCAGGTACTCGGTGTCCTGCCATTAACAACAGTAAATTTCTGGGACAGCTCTCATAAGAGTTTGAGG---------GATTGTGTCAACTG-TGTCAGATGTAGTTGGTACTTCTGTCACTGAAGGGAAGTAAAAAC------TTTTTTCTCATTTCCTTGCAGATGCCAGACTGTGGAAGACTCTTGCTTATTCCTGCTACCAAGGGTTCTTC---TTTTTTCTCTTTATCTAATTATAGAACAGTAAACTGTCTGTGACTTTCAAACTGGCAAGTACTTTTTTTTTTTAAACTGC------TGAGACTTTACTCCTCAATTA-----------TTTAATGCC------AAATATTT---ATATATTGCTAAAAAAGACAGCTTGATAGTTTGGTTAAATACCTACTAACCTCAAATTAAGAAAAAAAATCACTTCCCATTCTA-GTTAATGATACAG--TGATGTGAAGCTGTTGTACAGAGTCCAGCTAACATAGACAGAAAACTTGGGTTAAAAAAAGTAACTATGTGTTTATGTT-TCTGGCATTTGTAGACCAAAATCTTTTAAGAATTTAAaaaactgggctttttatacctttaatcccaacactcaggaggcagaggcaggataacctcttgagttaaggtcagctggtctacaaagcagttccaagaaagccagcagtacacagagaaaccatgtatcagaaaaacaaaaACAAGCAAAAAATAAAAACCTGGGCTTTTCCTGAACAATACATCTGTTCATCCACTATCTCTGAGATATCTTATGTACTGCAAAACTCCCCATTCTCATTTA----------GACATCTCTCTGCTTGAATATTTCCAGCAGGGGTTAAGTTTGGGCAGGGCGGGTATCTC---CCTATATTCTACCTAGAAAATATACTA----TCAAGCTAGCTGTGGATTCTATAGGAACAAAG-------------GGAGGCTCAAATGGATAATTGGAGAAAGCATGGGCTTTCCACCTGT---CGCATTTGATTTGAATTGAGAGTATAAATGTGTGAGGGGCCCTCATTATTGCCTTGGGATATGTGCATAGCAATTTAGATTTTTG s bosTau2.chr5 16350259 1112 + 76426644 aatGAGTAGATAGGGTATATGAAAAGAGAA-----AAAAATAAGTTAATTGGAATTAGTCC-----AGAATTGTCTGGAGAAGTCAGTTGCCTGGATGGTAAATTCTGATTT-----TCTCTTCACCCATGGTAACTATCAAGGACTGTATATTGATCTCTGTATAGAATGTTTTTAAATCAATTAACAAGTTTCTGTGTGATTAGTAATACTAAAGAGCTAAGGGTCAGAAGGTACCTGGTGTTCTGCCCTTAACAACAACAGATTCTTCCAGCAGACC----AAGAGACTGTAATTGGGCTATAGTTGTGTGGCCTGTTGTCAGATGTGGTTGGTGCTTTTGTCATTGAAAGGAACTAAGAACTCTTATTTTTTTCTTGTTTCCTTACAGATGCCAGACCCTGGAAGACT----TTTCTTCCCGCTACAGTGTGTTCTTCATTTTTTTTCTCCTAATCTAATTATAGAAAGATAAACTGTCTGTGACTTGCAAACTGACAAGTACCTTTTTTTTTTCCCCTCCCTGCCGTGAGTCCTTACTCATTTGATACAAGAAAAAACCCTCATGCTCAGAAGAAATGTTTCAAGTAAACCATCATTGTAGACAGCTTGATAATTTGGTTAAGTGCCTGC-AGCCCC-----AAGATCAGAATTCATATCCCATTCTGCATTAATGAAACAGAATCATCTAAAGTTACCTTAAAGGATCCAGCTAAAGCAGGCAAGAAATTTGGATTGGAAAAAGTAAC--TGTGTTTGTGTTCTCTGACTCACATGAACCAAATTCCTTCTAGCATTTATAGGAATGGACCTTTTCT-------------------------------------------------------------GTTTA------------------------------------------------------------------------------CTGAGTCTTTGATG---------------------------TTGATAGCATTTATATATAGAAATATACCCCATTCTTATTTAGAATCCTTAGGACATCTTGTTCCCTAAACTTTTCTAACTTAGGATAGGTTT----------CTTTTCTCTTTCCCACATTTCAGCTAGAAATTGTACTAGCTGTCAAGGTAGGTGTGGATTATGTAGGAGTGAAGATTAGAATGAAGAGGAGGAACCAGTGTACATGTGGAGAAGAGATAGGCTTTCCACCTGTGTGTGAAATTTGATTAAGCTCAAAGCTGAAATGTGTGAAG-------------GCCCTGGGACGTGTGTGTAAAAAGTTAGATTTCTG a score=23826 s mm7.chr15_random 2915608 667 + 7075849 GTTTAGTGACAGCTCTGTGCATGAGCCCTTCTCTCTCGGTCTCGGCAGTGTAAATAACAA------AGCCCCTTCTTCCAGGGCATGCTGGCCGACTTCGTGTCGCAGGCTTCTCCCATGATCCCTGCCATTGTCGTCAGCTGTGTCAATGAGATCGAGCAGCGAGGCCTGACTGAGGTGAGGAGC-----TTGAGCCCGGTGAGTTTGTGGTCTGCGATGGTGATTTGGAAGTTCCTAA--GTAAGTGTCATCTCTATAACAGGCAGGCTTGTACAGGATCTCAGGCTGTGACCGCACAGTGAAAGAACTGAAAGAAAAATTCCTTAAGGTGAAAACTGTGCCCCTCCTCAGCAAAGTGGACGATATCCACGTCATCTGCAGCCTCCTGAAGGACTTCCTGCGCAACCTCAAAGAGCCCCTCCTGACCTTCTGGCTGAGCAAAGCCTTCATGGAGGCAGCAGGTGAAGGCAGA-------ACTTGACTGTGGCGTCAGCCGATCCAGGGCTGAGCTGTG--TTTACAGTTTACTAATTTTTCCACCACC-TGTGCAGTGTCTGAAGTGTCCTAGGTACCCAGACTGTTGGGTGGGTGAGTGACTGTCCTCGCCTCCCATCATGCCGTTTCTTCCCTGAACTAGAgaggctaagagatgctctgtggttgagcactggcttctcttccag s bosTau2.chr5 24855214 621 + 76426644 GTCTGGGGATGGCTCTTCCCACTGGTCTTCATCTACTAGTCTAAGTGGTATAAATAATAACTCTGAACTCGCCTTTTTCAGGGAATGCTGGCAGATTATGTGTCCCAGACTTCTCCAATGATCCCGTCAATTGTTGTCCACTGTGTAAATGAGATTGAGCAAAGAGGGCTGACCGAGGTAAGAGTCCACCCTTGGAGAGGGTGAATTTGTTATTTGCATCAGTAGTTAAGAGGTTTTTAACTGAAAGTGTCATCTTGATAACAGACAGGCCTGTATCGGATCTCAGGCTGTGACCGGACAGTGAAAGAGCTAAAAGAGAAATTCCTCAGAGTGAAAACTGTACCTCTCCTCAGCAAAGTGGATGACATCCATGCTATCTGTAGCCTCCTGAAAGACTTCCTTCGAAACCTCAAAGAACCGCTTCTGACCTTTCGGCTAAACAAGACGTTTATGGATGCAGCAGGTG-GGGCAGATTTTAATGcttaaatatgagtcccgcgggggcag----gagttttgactcttctgtttcctgctttgtcccttgccgggtacagtgcctgaa-----tacagtgctcagatactgtgatggatgaataaC-------------------------TCTTCCATG-------------------TTCCCTGTG---------------CTCTTCCTG a score=37504 s mm7.chr15_random 2916438 2278 + 7075849 TTCGTAGGACTCACTGTGGGTCTTGATTCTTGGTCAGGTTTTAGGTTGTCCCTTTGAAAATAGAACCAGCTTTGATTCCTTTCTTTTCCACC-----------------ACAGACCTTGTTAGCAG----CCTGTAAATACACTTTAAATTTGGTATTTGTCACGAGTCCTGGTACTCAGCTGTCCTCAGAATATGTTGAGAACCTGCTAACAGATTGTCGAGTTTCTGCTTGTGCCC-CTACATGATAGCATCTGTGTGGT-GCTGGTGTGGTCCTTTTA-CACTCAGAGTTACTGGTGGCCCTTTTGTCTCTGTCCACCAttgttttgttttgttttgttttttgagataaggtttcattgtgtagttctggctgtcctggaactcactttgtagcccaggctggcctcatactcaaagatctacgtgcctctgcctccaagtgctaggattaaagtcatgtgccaccatggactggctTGTCCATCATTTTTAGACTAACTCCAGTCTTTAACATGGTTGAAGAGACCTGCA-GACTTGGCTCCTGGTCATTGTCTGCAACACCATTTTCTT---TATGCCCCTCCTTCCTCTTTTCTAATCCTGGAGTCTTGGATTTCTTTTTATTTTATGTGTATATTTTATGTATATGTTaagagccagtgagtgctcttaactgccgagccatctctccagcccAGAGTCTTGGATTTGTAGCACACACCCACCTCACGTCCTTCCCATTTGCTGCAGTCTTATCCCTAGCAGCTTCCCCTGACATCTCTGTACTGTGTTACTTC-TCTCTCCCCGGTTTCTCTTCACACATTTTGTCCTTAGAAACACGTTTCCTAAGCCAGGTGCATGACGTGGTAGTccagcgcttgggaaggatggcaggagggccggatgtttgagaccagctttggctacatagtgagttgagactggagtaagctacctggaacccagtttttaaaaCTAACCACAAAACCCGCCTTTATGGCCATCTTGTGAGAAGCAGGCCCTGTTACTTTAGCATTCCACGTGCTCAttttcttttttcctgaatactgcttgacatgtgttttgttttttgcatttcctgaccagctctttgattagagtatttattccattaaacaaggcctcttttcgtttcgttatcct--------cacatttaaaaatagcacgtggtacatagtaggccctcaa-GTGTCCTATGA---------TTGTTGATGGTTTATCACTGCACTTGTG----TGTCTTCCCAGCAA-ATGGGTTGCCAGCTGCTTTCTCTTAACTGAG----------TTTTAGGAAGTTCTGACTTCT--CATTGAACTGTTGGCCAGTGTCCTGCCTGTTAATGAAACTAGAGTCTGGTGCTGTCATGAACCGCATCAGAAGTTTCAGAAGCTCCGTGTATAGGTGGGCCTTTGTGGTCGATAGCCTTGAAGCTGC-TGTCCAGGGAA--GAGCCTGGACCT-TTAATGCTTTCTTGTCA-TCACAGAGATAACAGATGAAGACAACAGCACAGCCGCCATGTACCAGGCTGTCAGTGAGCTGCCCCAGGCCAACAGGGACACGCTAGCCTTCCTTATGATCCACCTACAGAGGTTAGTACAGCGGATGCTTAG-TCTGAGAGCTAGGGAATCTTCCAA--GGAGAAGAGTG----------------------TGTGGACAGTGAGTTGTTTT-TTCTAGAATGTATATTTTGGTGTATATTTAAGAGGAATAATATGTTTCTTTTTTCCCCCCACCTCCCCTGAATAATGTTTCTTAATATAATCTTTTATTCAGAGTGTCTCAGAGTCCAGACACTAAGATGGATATTGCCAATCTAGCTAAAGTCTTTGGCCCTACAATAGTTGCCCATACTGTGCCCAATCCAGATCCAGTGACAATGTTCCAGGACATCAAACGTCAGCTCAAGGTAGGGTTCATGGTGTGCACACACAGATGCAGAAGGTCTGATCTTTGCAATGCACTAACGTGGCACAATGACAGAAATAAGCCTTGCGTGGTGGGTGAGCACATGCAGTGGCCGGCTGTGCTGggaggatctccccagcctggtctacaagttctaggcaagcctgggctgcagagagaCTGAGAAACACACCAACAACAGAACCTGCAGTAAGGCTGGCTCTGTGCCCTTTAGGTGGTGGAGCGCCTACTCTCTCTCCCCTTGGAGTACTGGAATCAGTTCATGATGGTGGACCAAGAGAACATAGACAGCCAGCGAGGCAATGGAAA------------CTCAACACCACGCACACCAGACGTTAAAGGTCAGTTCTGCCCGACCGAGTTTGTGCTTCTTCAGGAGCTTGGC s bosTau2.chr5 24855867 1792 + 76426644 TTTGTCGTACTTTCTGTTGCTT----TTTTTGGTCAAGTTTTAGGTTGTCCTTTTGaacctggag-caaccttgatttttttacctcacgccttatatttaatccattggcgcatcttatcagcagaagccttgtaaatatatcttaaatttaaaatgtgtcat---tcctatt-----gctgtctctggagtgctgtaagaccctact----ggttttcctatttctactcttgccctctacagtataaccttcacatagtagctagagtggtcctttcagaatttaaattggacgatatcccttctttc---------------------------------------------------------ctcagtatctcccagaa--------------------------------------------gcctct---cataagtctcagaataaaatcca--------------------------------------------cagtccttaaca-ggccccaaagacccacatgattttgc-cctggtta-tgtctccaatatcatttccatcaacatg-ccttccttccttccttcttttccggttacactgaaattcttataattcctagactata---------------------------------------accgagcttactc-ccaactc---------gattagagg------------------ccatcatacttgtt---gtctcaacct--ggag-------tgacatttgcaggatttgctcctttgtttctttcaggtttcttgttggatagcttgtccacagaaacacct---------------------------gaccagc---tggtcagaa----------------------agaacagctcccatta------------------------------------------------------------------ctttctagttttcttgc---------------ctgccttattattatatgt--------------------atcactgcctgataggtattt----------gctttctgattgactcctccagtag-----------catggggcaagggc---ttttgtttagttctgcttgatgctgcgcactt-aaaacagtgcctggcacctggtaggctcttaacatgttttgtgaacaagtACCTTCTTTATAGTTGTAAACTGCAGTTATACATCTGCCTTCCTGGAAACACGAGTTTCCAGCTGCTCTC-CCGAACTGCAAGAGTTGTTTTTTTTTAAAGTTCTGATTTCTAATATTGAGCTGTTGGCCAGTAGCCTACTTGTTAATGAAACTAGAGACTGATGCAGTCATGAACCTAATCAGAAGTTTCAGAAGCTTACTGTATAGATGAGACTTTGTGGTCGATAGCTTGGAAACCTCTTGTCAAGGGAAAGAAGTCTAGGCCTCTTGGTGCTTTCTTTTCATTTACAGAAATCACAGATGATGACAACAGCATAGCGGCCATGTACCAGGCTGTGGGTGAGCTGCCCCAGGCCAACAGAGACACACTGGCTTTCCTCATGATTCACTTGCAGAGGTGAGTAGAGCGGAGATTTGTCTCTGTGAGTCTGGGAATTTGCCACATGGAAGAGAATGGGGGTTGGATGTTAGGGAAGAATGTGAAGGGTGAAGTATTTTCCTGTAGATCTTATATTTTGGTCTACTTTTAAGCAGAAGGACAAGTCTTC-----------------------TAATGT-------AATGCTCTTTTACATAGAGTGGCTCAGAGCCCAAACACTAAAATGGATGTTGCCAATCTGGCCAAAGTTTTTGGCCCTACAATAGTTGGCCATGCTGTATCCAATCCAGATCCAGTGACATTGTTACAGGACATCAAGCATCAGCCCAAGGTA---------------------------AGCAGGCATGTTATGTTACATGAACTCATACAACAAAACAGGACAAAT----------TGGTGA-------------------------------------------------------------AGGTAAGCCCTGAGCGTTGATAG---------TTCGCTAACA--------------------TGTTAGGTGGCTTTTAGGTGGTAGAACGCCTGCTGTCACTACCCCTGGAATACTGGAGCCAGTTCATGATGGTAGAGCAAGAAAACATCGACCCCATGCATGTCATTGAAAACGCAAATGCCTTCTCGACACCACAGACCCCAGATGTCAAAGGTAA---------GGCCTAAGGCGTGCTTCTTAAAGGGCCTGAC a score=15492 s mm7.chr15_random 2919547 488 + 7075849 TTCTTATGTGACGTTGCCATTTC----TGCTGCCATGAGT-----AGAATGCTTTTATTCCCATCACATAGACAT--------------------ATTAAAAGCTTCTTTTTAAGAATGGTGTCTTTTTTTTATAGTATATGTAAAAGTCAAAAGTTCAGATGTTAGATGTGTGAAGTTTGGAGATTGGGAATTGTCTGAATGAGGAAGTGAATGTCAGCTGTTTGTTGAGTAGT---TGGATAGTTCAGAAGATTCAAGAGCAAGTTACAAAACAAGGGCAGAAATGACCTG------------------------TTAACTGCTGCATGTCTGACCGTCAGAGGCGGGTCAGTGTAA-ACCATCCATCTT-CAAGAGGACTTTTTTTCCCAT------TCACTTAAAAATATGTCTCGTTTTTATTTGAAGTGAGCTTACTGGGGCCTGTGACCACTCCTGAATTCCAGCTTGTCAAGACTCCTTTATCAAGTTCCCTGTCACAGAGGTTG---TACAACCTCTCCAAGAGCACACCCAGGTATGCAGGGGTG s bosTau2.chr5 24858150 544 + 76426644 ttcttaaaggcttttgccaatttgtattgccaccaaaagtgtatgagactggtttcattccaacttcattggcatcggagacctgttcttttattattgcaagttGCTTTTTAAGGAAGTATATTGTTTTTTCTAGTACAGG-AAAAATCAAA----TAGATGCTAGATTTGTGAAGTTTGGAGTTTGAGAATGGCTTAAGTCAGAAAATGAATGTTAGCTACTCATTGAGCATTGCCTGCATAGTTCAAAAAATATACTTGTGTGTTATAAAATGATGACAAAACTGACCCCCGGGACTTTGCTAGGTCTCTAAACTTAGCTCTTAAGTGTCTCAC------AGGTTTTGTAGCTTAATAATAGTTGCCTTATGAGAATGCTTTCTTCCCCACCCCGCCTCCTTTAAAAATATGTCTTACCTTTGATTGAAGTGAGTTTACTGGGGCCTGTGACCACTCCTGAGCATCAGCTCCTCAAGACTCCTTCATCCAGTTCCCTGTCGCAGAGAGTCCGCTCCACCCTCACCAGGAACACTCCCAGGTATGTAGAATTG a score=61056 s mm7.chr15_random 2920681 2037 + 7075849 ggtcgtcaggTGCATATAGTAATTGCCTTTCTTCTGGTGTCACTCACCAGCCTGTAGAACACTTTTCTGATTCATTTTCTCTAATTTATTTCTAGATTTGGGAACAAGAGCAAGTCTGCCACCAACTTAGGTCAACAGGGCAAATTTTTCCCTGCTCCGTACCTCAAGTAAAGCTGTGTCT----------GCCTGTGTTTACTGCACGAGA---------CACCC---CTGTCTGCTCTTCAGCCTCCTGTGTAATGACTACTTTTAGCATTTTCCAGACTTTAAATAAAGTTGAAC-GCGTATGAGAGTTT---GAGTGTTGCATAGCTCCCTCCCACCT--------------GGACACTTAGCACCTTTACTAGTTGTCGGGAGCTTTAAAATAGGAGATCTTTACCAGGGCCGAAGGGGAAATGGGTATAAG-----TTGGGGCTCTTAGGGGGAGGGGAGAGGAGATCCCTTTGGCTTAAAGCCAAATACTGCTCATGAAATGACTTTGCTGTGGTGTCACTT-----AGAC-AATGACAGAAACTG-TACCTCTTAGGTAACGTCTTAGTTATCTCAGGA----------------CAGGATAAAGAG----CTGCGCAG-----------CGGCCCCTTC-TCAGAACACAGG----CCTCTTCCTCCTTCGGGGACTGACAAGAAGC-TTGGAGCCCTCA-----GCGGGAT-------GGGCCGGGCCACTGATCTGAGGATGCTTCACTTCTGTCTGG----GTTAAGCTGAGAA------AGTGCCACAGGCTC-------TGATCTCACACAGCGTGCT-GTTTCTAGCCAGCCTCTGCC-------TGGATTT---TGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGCCTGAC--CCCCTTGT----TTGTCCAGTGGAGCCC--ATTTAAAAAGTCAG----CTAGCAGTTCA------------------------------GAAGA----CAAT-TTTCATATAGCAAGAAAGTTAGCTGC-----TTCTGTCTTTGG-----------TGAAGTTTTTCTGTGAAACAGATCT--ATATATGTGAACATTGGCTTTT---TTGGTTAGCATT--TTCCAGTGT---TCAAAATGGCTTCCTTCCCTGGGATGTTTTCTGACCCATA----------------------CTAACCCTTACCTGTAACATGTATCTGGAATATTATGTGGAAAAAATAAATAGCTTTTTCAAAGTGAAAGTGATGTTGGTTTTCTTGTC-----------CTTCAGCCTCTTCCTGATGA--------------------TCTCTTTCCAA--------TCAGTGTTTTCAGTCTCTTGTTTGCACCTCCC-----------AGCTGAACCTGAAGTAAACCTGGAGAACTTTGTCCTCCTCCTCGTTGTCTGTTTT----TCTAAACTGAAGCCCTAGATTTGT---------TATCTTCTTGTTTGAAGGAAGCGTTTTAGGaaaaaaaaaaaaagaaaagaaaaagaaagaaagaaagaaaaaaaTATATATATAAAAAAACTTTTTAAACCAGTCTTTAGGGATCAGAATGGTGCAG-------ATTTAAAGGAAAAAATTGCCGCTGGCTGGCTGCCTGGAACACCCTTCACTGCTGGAAGTGACTCTGGCGTGAGCCAGGATGATTAACTGAGGGCACCTGCACTTGGAGCTCAGAAGCTGGTGAGCAGAATGTATCTAAGATTGAACACAAACAGTTGCAGGCTTAATATGTAGCAGTGGAGAGAGGAGGCAACCTACTGGCTTTTTTCCCAGGAGGGGGCAACTCTCACAGCAGGGCCCATCTGCCTCAGCAAATTGACAGAAGATGGGTCCCATCTCCCAGACTCCCCT-------------------CACACATGCCGGC---TAGGCTTTTTTTCT-----AACTCTGTCCTAGATGTTACCTCTTTTATTCTGTTGTTGCAAGCTTCCCATTGGCGTGGCTCCACATTTGCTGATCTGTAGCGTCTCTCCAAGGTACACTCGAAGTCACTAATGGAGAAGAAGTAAATGAGTTGTGTAACGTTAGTGAAGGC--AAGACTACCCTATGCAGGAATTGATGGCCCGTTAATGAAGAAGGAAACGGCCTCCTCGTGTCACCTGCTGGCAGCCGGTTGCTCAGGTTTTGAGCAAAGCCAAGAGACTTTAGCTATGGGGGCGATTTTAAGATTAGCAAAGGGA---ATGTACCCGCTTTCAGCTTC---AGCAGCCCCTCACACACAACA-----ACCATCAAGGGCCTTTTGGTTTGttttgt s bosTau2.chr5 24859200 2248 + 76426644 GATTGTCAAGTA-ATGTTATAGTTGTTTATTT------ATCATTT-----TTTATAGAGTACTTTTCCAGTTCATTTTCT-----TTTTCTTTAGATTTGGGAGCAAAAGCAAGTCTGCCACCAACCTAGGACGACAAGGCAACTTTTTTGCTTCTCCAATGCTCAAGTGAAGTCGTGTCTCCTGTTACTTGACAGCATTTACTGACTGTGGGGAAGAGTGCACCTGTACTCTCTACTCTGCAGCCTC-------ATTACTACTTTTAGCATTCTCCAGGCTTTTAATCAAGTTTAATTGTGCATGGGGGTTTTATGAAAACTATATATATCTCTTTCTCCTTCTCCTCAAGTAATGTAATATCAACACCTTGTGCTGTCTTTGGGAGCTCTTAGATGGGAGATCTTTAC----------------AGGGGTATGAAATTCATTGTGATTCTTTTGCAGGCTAGGAGGGACATCCCTTTGGCTTAAAGCCAAATTCC-CTCATGTAATGACATTTCTCTGATGTAATTTCCATGAGACTAGTGGTAGAAGCCCCTGCCTCTTTGGTAA-GACTGACTTGTCTTGGGGTGGGAAATAGCGGGGGCAGGGTAAAGAAAGGTTTGGGCAGAGAATTTAGGATGGCTCCTTCGTGAGAACTTGGAAATTCCCCTTCCCCTGTTAGGAGCTGAGCTGTAACAGTGGAGCCTTCATAGAAGTGGGATATGGGGAGGACTAAACTAGTAATGGGAGTGTGCTTGGCTTTAATTTGGTTTGATTAGGTTTAATAGTGTTAAGTGGCACAACCTTGTAAAAGTTATACTACAATTTATATTTATTTCTAATGGGCTTCTGTTGGGACATTGGGTTTGGTTGGGGTCAGAGCCAGTTTATTCTTAAGTTGAATTCATTCTGATGCTTAACACCCCCCCGCCCCCTTGTCCATTGGAGCTCTACTTCTAAAGGTCAGTGTACCGTCTGTTTAACACCCAACTAACAAGAGTAGGCTGTAAGGGAAGATTGTCAATATTTTGAGTGGCAAGAAA---AGCCACAGTCATTTTGTCTTTGCACTTTGGATGCTGAAATCTTCCTATGGAGCATAGCTGCATCTAGATAAATATGAGCTTTTCCTTCTATTAGAATTATTTACAAAGCCTATCAAAATG-CTTCCTTCTATAGAATGTTT-CTGACCCATAGTTTCAGAACATATAGAATGTTCTGACCCTG---TAAAACATACATTTGGAA-----------AAAAGTAAATAGTTTTTTCAAAATGAATGTGAGATTGATTTTCTTGTCTGGAAGATAACCTTCAATGCCTTTTTAAAGaaaatatatttccccaaaatatatttccccaaaaGTGTCCTGAGTCTTATCATTCATTTCTCCGCTCCCCCCTCACCACCTCCAGCTTCACCA-----CCACCAGGAG----TTGGTTTCTTTGTTTCAGTCTCTTTCATTGTCCAAAGTGAAGTCCTGGATTTGTCCTGACTCTTAACCCCTTATTTGAAGAAACTACTTTAAACAAAAACCAAA-------------------------------------------------CTTTCTAAACAAGTCTTTAAGGACGAGAATGGTGCAGGAAAAAGAAAGAAAGAAAAACACAAACGACTGCTGACTGCCTGGAATACCCATCACTGCTGGAAGTGCCTCTGGAGTGAGCTGGGATGATTAACGGAGGGCACCTGCACTTGGAACTCTGAAGCTGGTGAACAGAATGTATCTGAGATTGAACGTAAACAGTTGCAGGCTTAATATGTAACCGTGGAGAGAGGAGGCAACCTACTGGCTTTTTTCCCAGGAGGTGGTAGCTCTTGCGGCAGGGCCCATCTGCCTCAGCAAATTGACAGAGGATGGGTCCCCTCTCCCCTTTCCCTCTTTacacacacacacacacacacacGTGTGTGCCTTTAGGATTTTTTTTTTTTTAAACTTTGTCCTGGATGCTGTCTTTCTTATT---TCTCTGCAACCTTAGTGTTGGCCTGTCTCCATATTTGCTGTTCTGTAGTATCTCCCCAAGGTACATTTTAAGTCACTAATGTGGAGGAAGCAAATGGATTGTATAATGTGAGTGAAGGCAAAAGAAGACCCTGTGCAGGAACTGATGGCCCATTAACGAAAAAGGAAATGGTC-CTGTGTGTCAAATGTTGGCAGCCAGTTGCTTGGTTTCTAGGCTAGGCCAAGAGACCTTAGCCATGAAAATAATTCTGATATTAGCAGAGGGAAATATGCATCAACCTTCAACTTCTTTAACAGTACTTCATGTGGAACAGCTTGACTTTCGAGGGCTTTCTTAATTAAATTGT a score=2187 s mm7.chr15_random 2922913 44 + 7075849 CTCTTGCTTATAGCACTTTCTCAAGCTGCCTCTTCATCTGTCTT s bosTau2.chr5 24861507 44 + 76426644 CTCCTAATCCTAACCCTTTCTGATGCTGCCTCTTACTCTGTCTT a score=5392 s mm7.chr15_random 2923167 190 + 7075849 GCTAATAATGGGGATCTTTAAACCTTAAA-------------TGTCAATTTATACACAACTCCCTAGT--GGTATTTACTTAACTGGACAGGCATTAGCTGGATTGATTCAATAGCAACAATTTGTGTTAATTGCTGGGTATTTGAC--CATTTCTCCTTTTTCAGGAAGATGAATTTGTAGCC-------------GGGCTTGGTGGTGGCttaaactt s bosTau2.chr5 24861577 220 + 76426644 GCTAATAGCCAGAATATTTACATCTTTAAATCCATTCATCTCCATCCATCTGTGTAAGGCTCCTGAGTTTGATGTTGATTTAACTGGGCAAGCATTACATGGTTTGATTTAGGAGCAACAGTTGGTGTTTATTACTGGATATTTAATGGTTTTTTTTCTTCCTTGAGAAGGTGAGTTCTTTGCTTGCAGAAATAAGAGGGCAAGAAGGCATCTTGAGTTT a score=18283 s mm7.chr15_random 2923932 526 + 7075849 CTATTTTTTCCTAGGGCCTTTTAACGTGAAT-GAGAAAGAGCTGCTGTGGAAGTCCAGCTTTGAGAAGTGAGTATGACCATGTGGTTCAGCGTTTAAGT--------------CAGTAGAATCTTAACCAGTGTACGTTATTTAAC-ATGGGCTTGGTGAGGACTCAGACTCAGCTGTCATTAGGACGCAGAGACTATGTAAACCTGTGGAGCTGG---------GCCCATGTGCTTTTAGTGCACACAGGGTTTGGAGAATGACCACTTAACCTAAGAACTGGTCatttttttttttttt--------ttaaatatGCTTCCTGTAGCTAGAGTATTTTGTAAACGTA-GAAAGGCACCAGGCCAGGAGCTCCCTAGCTTATGTAATTCGTTAGACTGTAATTCTCAGAA-CTATATTTGTTGATGGTTGCTATTCAAGAAGTCAGGTGGAAGATGGCCAG-TGCCACCAGGAATAACCTTGCA----GTGAGAGTTTTGTTCTCTGTCATCACGTAGGATGGGAAAGAAGACCAC---TCGAGGACTCATGGTTGGAAGTGGGGGTT s bosTau2.chr5 24862143 543 + 76426644 TCACCTTTTCTTAGA--TTCTCAGCAGGAGCAGGGAAAGAGCTGCTGTGGCA-TCCAGACCTGAGAAGCAAGGGTGGCA----GGTGCTGAGTTCAAGTTGGCGTAGCTCACACAGTAGGTTCTTGATCTGTGTGC----TTTAACGATAATCTCGGTCGTGACTCAAGCTTGA--GCCACTGGTGCGAAAAGCT--TTTAAGCCTGCAGAGTCAGGGCATGTTAGTCATTGTGCTGTTAGTATAAACAGGGTTTGGAGAGTGGCCACTTCACCTAAGAA-----------TTTAGTAATTAAAAAAAATAAAATCTGCTTCCTGTAGCTGGTATATTTTGTAAATAAGTGAAAGGCCCCAGACCAAGAGGTCCTTAACTTGGGTGATTTGTGAGATTCTCATTTTCAGAGTCTATATTTGTTGATGGTTTCTATTCACGAAGTCAGGCTGAAGACAGCTTGACGTCACCAGGAATAACCTTGCAGTGTGTGGGAGCCTTGTCCTCTGCAGTCGTGTAGGATGGGAAAGGAGGCCACTTTTCAGGGACACAGAGTTGGAAGCAGGAATT a score=5400 s mm7.chr15_random 2924697 144 + 7075849 TATCATACCCCACACAACTGGCCAGCATCTCTGTGGCTGGCTCAGACAC----AAATAAATATGGAGTCTTCTGATGAAGCCTTTGCCAGTTA--GTTATTCCTGCTCATCACTGA------AATTAAGGGTACATTCTCCGTAAACTCTCCAGGA s bosTau2.chr5 24862762 156 + 76426644 TCTTGCATCTCACACAGTTGGACACCATATGTGTGTTGGGCTTAGACACATGTAAATGGATATTTAGACTTCTAATAAAGCACTTGCCAGTTAATATCTTCTCTGGTCATCAATGAAGATAGAATTAAGAACTGATTCTCCACAAAGCCTCCAGGA a score=20526 s mm7.chr15_random 2926380 623 + 7075849 TGTAAGTGACTCCACTGAGATCT--CTGTGTAAATACAG---TTTGCATTCTAGAG--------CAGAAAGAGTTGGGGGGACAGGCACACTGCAGGCAG----GGGACTGGGGCAGACTTCCTGCTGGGTGGGACGTTGCTCAACAGTGTGGAGGAC------TCGGTGGTCCTGGGAAGTTTTCTGTGTGGAAGGAGGAGA---ACAGGT-----ATGCGCGTGCGAGGTTGTCCTC---------TTTCTGTGAGGCCACCCGTGCGGAGCCTCTGTGCCATGAAGCTCCAAGCCAAAGACAGACAAGCCTGAGCCGAA-CTATCAGCCAGCTTTGAGGAACATGTCAAGGGATTAGCTCCCTGGCTTTCCCTCTGAGTGGCATTAGCTCTCACTCCGACTCATGTTTACCATCTGGCTCTGAGTAAGAAGTCTTGGAGTGATCTCTC--CAGCAGCCTGAGCTGTGCCAGGCCTTTCTGA-GGCTCTTCAGCCTTCCCCCTCGTCAACCCCGGGGCCCAGTGCTCT--------CCACGGA-----------------GTTGTGTCCACGTGTCTGCATGCCTGGGATCAGAAGAATTTGTTAGACTTCCGAGAGGGGGAAAATGAACTTCCAGCCCATGGAGTCCATGTGGTTAATGGTCCAAAGTCTTTCTGTTGTCAAAACTAAC s bosTau2.chr5 24863166 676 + 76426644 TGTAAATAATTCGACTCAGGGCTGGCTGTATGCAGACGTGCCTATGCACTCTCGACAGATGACCCAGAAAGAGCAGGAAGGCCCAGACCGCTGGGAAAAGCATTGGGACTGGAGATTATTCATTCCATAATGTTGGGTTGTTGGGTCAGTTGGAGGACCTGGGCTTGGTGGTCTGGTGCTGTCCTCTGTGTGGAAAGAAAGGATGGGCTGGTGGAGGATGAGCTTA--AGTTTGTCCTCGTGGGAGTCTTCCTG---GGCCACCCATGTGCATCTTGTGTGCTCTGAAGCCCAGAGCTAAGATCAGGCAAGACTGAGCCAAAGCCATCAGCCCGCTTCTAGAGACGTGTCAGCGGATTAGCTTATTGGCTTTCCC-CTGAGTGGCATTAGCTCTCACCCCGTCTCATGTTCACCATCTGGCTTTGAGTAAGAAGTCTTCGAGTGATCTCTCTTCAGCAGCCAGCTCTGTGCCAGGGCTTTCTGAGGGCTGTTCAGCTTTCTCCCTCATCACCCTCAGAGCCCAGGGCTCTGAGGAGCCTCTTGGAAAAGAGGAAGCCCGTTTGTTGTGTTCACACAAATGTACACCTGGCATCCAAAGAATACTTGAGACCTC--AGAGGAAAAAAATAAGGTCAAAGGAGAATGAGTGCC--TGGTTAGTGGCCTAAAGTC------TTGTCAAAACTAAC a score=25083 s mm7.chr15_random 2927003 543 + 7075849 AAGTGACCTTGTCCTTAGGT--------------GAGTTGTTCCTACTAC--------AGAGGACATTCTGCCTGTGCGATGATAC-----GCTCAGAATGCAGTAGCTAGAGAGATACAAAGGGGCTGGGATTTTTCT------TTGGAAAGTGAGGCGTAGGGGTGTGTGTGTGTGGGGGGGGGGTGCTTGAATAAAGTACCGCCTTTCCTCCCAGGGAGCTGGCTGCTCTCCCCTCCTGGGCTAATGTGCACTGACGAGGGCTAAACGGGAGGATGCTTCTGGATAGCATCCAGCCCCTCAGCAGAGCAGCCACAT--TGGAGATACAGCTGCTGGCATTAAAGGGCTAAGCCCTTTCCAGCTGCTTTGCTTTAACGGGGAACCTCCCGCGGCCGGCGGCTTAAGGGAGCCGTCTTAACTGGGTT-AGAGGAAATGACTAATCTGTGCATCTTCTCACGAGGCTGCTC-GGAGGCTCCAGGAAAGATAACCTGGTGGGGTGGGAAGTGGCTGGATAA-TGGTGTTAGAGAGCTAGGCTATTATTGTCTC-AGAATTGCGGTCCTGGGAGTGCCAGAGCT s bosTau2.chr5 24864019 560 + 76426644 AAGTGGCTCTGTCCTTAGGTGAGTTTTAAAAATGGAGTTGTTCTTGCTACCTGTGAGAAAAGCTCTTTCTGCCTGTGAGATGATACTGTTTGTCCAGATTTTAGTAGAGCGAGTCCTACAAAGGGGCTGGGATTTTTCTTCTTCATTGGAAAGCAAAACCTGGGGGT---------------GGAGGTGCTTAACTGAACCACCTCCCCTCTTCCCAGGGAGCTGGCTGCTCT--CCTCCTAGGTTAATATACATCGACTGGGGCTAAATGCT-TGATGCTTCTGGACAGAGTCCAGCCCCTCAGCAGAGCAGCCACACTGTGGAGATACAGCTGCTAGCATTAAAGGGCTAAGCCCTTTCCAGCTGCTTTGCTTTAAC-GGGAACTGCCTGCAGTTGGCAGCTTATTGGCGCCGTCTTAGCCCGCTTCAGAGCAGATGACTAATCTCGGCATCTTCTCAGGGCCCTGGTCTGGAGGCTCGGGGGCAGGTAGCCCCGTAGGGTAGGAAGTGGTTGGATAATTGGTGTCGGAGTGCTAGG---TGGTGATCTCAAAAATGGCAGTCCAGGCTTTGGCAGGGTT a score=4770 s mm7.chr15_random 2928772 380 + 7075849 AGGCATAGTCTGGATAACCTAAAAGCTGGCATTGTAAGAGACG-----GGGAGTGGGA-------AAGGGTAGGGA------------GCTGATGGCCATTGCTCTGAGAGGAAGGGAGACTTGAGGCTCTCCT-----GATTTAAGCCCCTGTTTAAAGACCTAAGATTTGAAGGAGAAACAATCATGTTATTGATTGTGAGATGTGCTTTAAAA-ACACCTGACTAACACCTAGGATACTCAGGGCATCTTATAATCCACGGAATTTTACAATGTACCCTTTGTTTTGTTTTGTTTTTCTGGTTGGCTCATATATT----------CCTACATTTCACATTATTTTGGTTGAAAGTGTAACCTGTTC-------------TGTTCATT-------------------GGTAACCTACCACCTTGCTATGATCAAAGACATGTTAAAACAG s bosTau2.chr5 24864661 416 + 76426644 AGGGGCAGCCTGGGCA-TTTAAAAGCTGGAATAGCAACAGATGCACAGAGGAGTTGAGTGCATACGAGGGCAATGAATGTTATCTAAGGAAGATGACTTGAGCCCTGTGATGCGGTCCCACTTGGGCCTTCCATTCCCAAATCTGAGTC-------AAGGAGCCAAGACTTGAAGGAGAAATGATCATTTCCTT-ACTGTAAAATGCACTTAAAAATACAATTTAAT---------GAGAATTAGATTCTCTTATAATCAGTGGTATGTAACAGTGC------------------TTTTCTTCAGTGGCTGGTACAGTAGTGGTGCATCTTATCATCCAGATTGTTTGGCTTGGAAATATTAGCTGTTCATGAGAGGTAGGCTGTTGGCTAGCCCCAGTGTGGAGGCAAGGGAACCTTCTACTTAGCTGTGATCAGAGAGAGATTAAAACGG a score=4022 s mm7.chr15_random 2929867 398 + 7075849 CCCTTGTCTGAGCATAAC--CACTCCAGGGAAAGCAAAG----ACACCAAGAATCTACAAAATATCCTAGCACAAAGGAGCAGACACACAGCATGTAACACAGGATCGAAATATATCCCAGTCATCATCCCCAGAGCAAAGAC---------------TCAAGAAGGGGAGAAACACAGTTGACAGAGACCAGT-----CCTGGA---------------------GGTAAGGCACTGAT----CAGAACAGTCTATAGGCGGC-AAGGCATTGTACCTGAGACTGTTGGAAGTGTTCT-TATGATCTTT-GTGCAGTCCGCTCATCAAGTCCAGAATACCCGAGGAAGGTCTTTCCCACAGACGTACATCTG----GACAGCTCC-ATggtgac-----------caaggcaggaggattaccacaagtctgagacctgcctgggctacatGCTGCCACAAAGGGAG s bosTau2.chr5 24865085 449 + 76426644 CCCAGGTCTGAGGGCAGTTGCAGTATAGGAAAAACAAGGCTTAGCCCCAGGA-----CAA------CTGGTATGAAGAAGCAGACAAGCAATGTGTAGAAGAGAATCAAAATCTGCCCCAGTCATGACCCCCAGAACCCTTACATGTGACCCCTGAGTTGGAGAAGGGGGAAAAGA-AGGGGTTGTGGATCAGTGAGGCTCTGGCCATGATATAACAACACATCCTGGTAGAGTTCTGAAATCACAGTACAGTATTGAAACATCCAAGGTTCTTTACATGGAGGTGTTAGA--TAATCTGTACAATCCTTCGTCCAGTTCGCTCACCAAATCTGGAATGCCAGAGGTCTTTCCTCCTTGGGGAAGTGgggcttccctggtggctcagatggtgaagaatctgcctgcaatgcaggagatttg-----ggtttgatccctgggttgggaacattccctggagaagggca a score=16803 s mm7.chr15_random 2930334 1012 + 7075849 GGGACAGATACTGAAGTCAGGGGAACGCGTCCCGCAATTAGTAGACTAAAAATATCATTCTGTTTTAAAAGGCCCTTCTGT---------GACAGGTGCTCACATAATCTAGCAAAAAGGTGTTCAGTGCCAGGGCAGAACTGGG-GTAGAGTGTGTGGGAGCC----GGGGAGGGAGAGCTGGAAGCT---GACAGTCTCCACAGTCGTGATG----TAAGGCTGGAATCCAGGGAGAAAAGAATTCAGCTGCT-GAGGGGCCTGGAAGATGTTCCCAGACCGAGAACATTCAGCACATGGCTCATGACTCTGACATCACAGATCTCTGCCCTGG-----------------------GGGTGGGGGTAGGGGGGGCTCTGTCCTGTCCAGACCCTGTCTCAT-TGTCTA-GGGTTAGGATGGGAGT--CTGGTCTTTGCCCGTCTCTGGCCTTCT---CCCTAAG-------AGTCTTTACTTCTTCATCGGCCCTAGTCAGAGCTCTGAAATACCATGTTTTATTTCTCTCCTTTTTTTTCCTGCCCACTAGCTGCAGTCTATTAATTAATGCCATCAG-------AATCCTGTAACCTTC--TCACTGACAGTGCCTGGCCTCCACAGCTTT-GCTGAAC--GCGACT-CTGCCCTGTGAGGCT--CTCTCCCTGAGAAGTGATTGCAGATCTTGCCTATGCCGACCCCCTACCATGCCTGCCCAGAGTGGCCACGGCTTGGCTAGATGCTTTGTCCTGATTAGCTCTTAACTTCCTCCCTGCCTTTCTCGC---------------TGACACCACTGCAGCTGGCCATAAGCTGTAGGTTTAAAAAAAAAAATCTCT---CAAGCTCCGTTTTCCCTTCCCCTGTACTCCCCAGCGTCACTCTGAGCT------ATGGAGGGGAGCAGGTGAGGGCAGTATTGTGGGTAATTC--------------------TTTCTCT------AGTGGAGTCTCCCATCAGGAGTTCAAGGTCACTAGCAAGCACCCTGATCAACCTGTT----ATCATTTGACTTTGTCAGAGATGGCAAGGATATCGCTCTGTGACTTTGTTAAAGATGGCAAAGATATCGTTCTATGCTATTCCTCAAA s bosTau2.chr5 24865678 1052 + 76426644 GGGACAGATGGTCAAGTTAAGG-AACCTGTTGCCTGGAGATGAGACTAAAAATATAATTTTGCTTAAGAAAGTCTTCCTGCTTGGGTAGAGAGAGGTGTTCCCAAAACTATGAAGAGATGTGTTCAGTGCCAGGACGGAGGTGGGTGCAGAGTGCTGTGGAACTTTAAAGGAGGGAGGAACTGGAAGCTTCAGACAGAGAGCCTGGAGCTGATGACTTGAAAGCTGGGACTCAGG-----CTGAACCTGGCCGCTCGAAAGGCCTGGAAGCATCAACAGGGCTGGGGAGG---GGCCTCTAGGTTGGTGCTCTG---TAACTGGTCGCTGTCCTGGACTGCTGTCCTGTCCTCTCTTCTGACCGGGGCT-----GGGCCCTGGCCTGCCTGAGCCTTGTTCCATCTGTCCGCGGGGGTGCAGGGGAATTGCTGGTCT----CTGTCTCTGGCGTCTTACACCCCCAGCTCAGGCAGAAACTGACTCTTTATCTGACTTAATCAGAGCTCTGAAAAA----------TTTCCATTCCCTGCTTTTCTGCCCTTTAACTGCAGCCTATTAATTAGTGCCTTTGGGCTCCCCAGTCTCATAACCTCCCTTCCCTAACCATGCCTCCCCTCTGTAGCTTTTGCTAAATATGTGACTGCTCCTCAGTGTAGCTGCTCCCCCCTGAGAAGTGATTACAGAGCTTGGCTGTGCAGACCCCCTGCCCCAGCTGCCC-GAGTGGTGACCTCTTGGCCGGAAGCTTCCTCTTGATTAGC-CCTAACCTCTCCCCTCCCTCTGTCCCTCCCTGTCCTCCCCTTGACATTCCAGAGGCCTGGCATTGGCT----ATCTATCAGTTAACACCTCTTGCTAGgagctgtcttcatgttccaggtcatggagaactgcattgtgagctgtcttcatgttccaggtcatg-gagaactgcattgtgagcAGTTCACAGAGAGGTGAGCTGATCACCTCTCCTGACCGAGCAAAGTCTCCCATCAAA---------------------ACCCCAATTAGCTTGTTCCAGATCACTTGACCTCATTATAGA---------------------------TTAAAGAT--CACAGATTTTGATCTATGCTGCCTCTTAAA a score=35607 s mm7.chr15_random 2933990 855 + 7075849 AGCCTTGGCAGA-AGAACCCCTTAAGGCAAAGTGATTTTCTT--GGAAAGTAAA--TCTCTGG--------TTTGGTCCCCATTTCCCTTAGACCTGGGGATTATATGTGTCCCTCTGGTCCCTCTCTGGCCTCTTCCACCTTGCACAATATGGTCCCAGATGAGGCCTGT--CCTCTTTATACCTGAGGCCATCAGCTGAAGACCAGCAGTGGGGGCAGAGTGGGGGTGGGGTGGCAAGGGGCTTCCCGCCAGCCAATCGGAA-GTAAATGCCTGGGCTCTGGGCTTGTATCATCTGCTCCCGCTAAGACAATCATCAACATAAAAGGCTAATTGTATTAATCACCAAGGCACCCATCCTGAGTCCCCCTCCCCCGCGAGAGAATTATGAATTGCCACTGCAGATGGCCCCACTGATTGAAAGCAGTACTCAGCAGGAAGAAGGAGCAGATCAGATTACACACCATTAATTAAAAACTTCCCCTGACAAATGAGAGACAGGAGGCACGCACTGAGAGCCTGCCTGG-TGGGTCTCTGTCCTCCCCAGACCCTTTGTCCC--CAACCAGCCTCAGGGAGTGTGGTGGTGAAGCCCACTTCTCCAGCTGGAGCCCCTGAGATCAGGAGCACCGAAGGCCAACTCTCCCCTTGTCTAAACAGATGGCCTGCTGTCCTAGGAAA-GTCTCCAGGGAAGGAGAGGCTAACCTTTGCTTTCTTGCTC---TGTCCAACCTCCAAAGCTCTCCGGCTT-TAACCTGATTCCCAGTTCCTCATTTCTCCT-TCCCCTCCTCTGGTCCGTCCCTACAG---AGGGTGCTAAAGGACTATCAGTGAAAAATGGCCCCCAGACGTCCCTCAAAGCA--CCCCCTTGCTCTCTTGG s bosTau2.chr5 24867418 838 + 76426644 AACCTTGACGCACAGAATCCTTTAGGCCCAAGTGATTTTCTTTTGGAAAGTGAACGTCTCTGGATAGTTGTCTTGTTCCTC--TCCTCTCAGTCCCAGGA-----------------GCTCCCTCCGTGGAGCCCCCCTACT-GTGCAGCGTGGTCCCAGATTAGACCTGTGTCCTCTTTACACCCG-----------------------GAGGAGGCAGTGGGGGTGGGGAATGGAGAGGGGCTGTCTGCCAGCCAATGGGGATGCGACAGCCTAGGCTCTGCGCTCACATCATCTGCTCCTGCTAAGACAATCATCAACATAAAAGGCTAATTGTATTAATCACCAAGGCATCCGTCCCAGGCCCCCCTCCCTTTCAGGAGAATTATGAATTGCAATTGCAGATGGCTCCGCTGATTGAAGGCAGCACTCAGCAGGGAGAAGGGCCAGATCAGATTACACACCATTAATTAAAAACTTCCCCTGACAAAAGGGAGGAAGGGAGTGCACACCAAGGGTCTGCCTGGTTGGGTCTCTGTCCTCCCCAAGCTCCCCAGCCCCTCATCCAGGCTCCAG--TTGTGCCTGTGAAG-CGAAGACCCTGGCTGGAGCCACTGAAATTTGGCTCCCCAAAGGCCAGCCCTTCCCAcatccaagcagatggccggctgtcctattaaagggctccagagaaggagaagctaacctttggttactcattcctgtgtctaactttggatgctcttcagattctaacctaattcctcacttctcatgaagcttgtctcttgctctagtctATTCTGACAGAGCAGAGCTTTAAAGAACTATTTG-GGAAAATAGCCCCCTGCTTTCTCTTCAGGCAGTCACCCTCATGCTCTTGG a score=19129 s mm7.chr15_random 2935525 435 + 7075849 CTGCTCCAGAGAGGTGGGCGGAGACTCAAACCGTGACTGC-CGCCCTCTTCCCAGC----CCTACATGGAAGCAGAGACTTCTCAGCTGCTGTCATTTTGGTTCATTTGGAGCTGCAAGATCTGAATTTTCCTCTTCTTGATCAGTTCCTGCCTCTTCTCCCTCCGCAGCTGCCCAGCCCCAGtcactcattcatcaaacttgtattgagcacccagtgtgtgcttggcttt-gGGGCCACAGAGACAATTTGTCAAGAGGCTTAAAAGCCTACCGCAGGAGCTCC----------CTGCTACAACGCTCTAGCCCCTGCCTCCTCCTT--CCATGGCTGCAGCTTGTCTGAGACCCCATGGAGATCTGTTTTAGAAATTTCTAATCAGGGGAGCGAGGGACACCTTAGGGG---TCTATGCAATGGAGTCAAGTGACCTTTGGCAAGTCAATCAT s bosTau2.chr5 24868281 445 + 76426644 CTGCTCTAGGGCAG-GCGCAGGAGCTCGA---GTGGCTGTGCAGCCTCTCCCCAGCTCCCCCAGCCTTCGAGCCTAGGCTTCTCAGCTGCTGTCTTCTTGGCTTATTTGGAGCAGTGACTCCCGAGTTTTC------TTGATCAATTACCACCTCCCCTCCCTCCCCAGCCGCCCAGCCTCAGtcattcattcatcaaacttttattgagcacccactgcgtgcttggttctcagggatgcggagatAATTTGTCTCGGAGCTTAAGAGCTTGCTGCAGGAGCTCCACCCCCCTGTCCTCTTCAACCTTCTAGTTCCTGCTTCCTTCTTTTCTCTGGCCGCTGCTTGTATAAGCCCCCCTGGAGCTCTATTTTGGAAAATTCTAAGC-TGGGAGCTGGGGAGACCTTGGGGGGGGTCTGTGGTACTGAGCTGGGTGACCTTTAGCAAGTCAATTGC a score=15918 s mm7.chr15_random 2936089 591 + 7075849 acacacacacacacacacacacacacacacacacacacacacacCG--GCTGTTAAAAGGGCACAAGAAGCAAGACACCTGGGGCTTTTTATGAGATGGTGAAGATGAAT-AGGAGGACTCAGCTTGGAGAGACATGGATAGCCCTTGGCACCAATGATATCACAGAATGCAGAACATAGATGCTG-GGCCACGGCCACT--------GGTCACTGCTGTAGTCACAGGTTGTGGTCCATCGACCTGCCCTTGAAAGACTCTGGCAGCCCCTCCCTCCCTCATCCTGGACCATTGAAAGATGCAGAAAAGGACTTTAGCACTTGTCTTTTTTTTTTTTTTTTTAATGGATTTGGCTGCTGCATCTCAGGGTACCATGGTGATGGGTGCCATAGAGATGAG---AACTGACTTGAATTGGCTTATCTCTTCATTCCAGGGTCCCTCCCCTA------------------ATCCCACCCC------------CACAATGCTCCC--AGGTCAGTAGACCTCAGAGAGAAGGAGGCAGGGCTCTGGGTAAACTGACCAGTGGAAGGTAGCTGTCTAGTTTTCTGctctctcgctctctctctctctc-----tctctctctccccccctccctccctccctcCCtt s bosTau2.chr5 24868726 559 + 76426644 ACGCACGCATGTGTGCGCGTGCACACACGTGCACGCCCAGCTGTCGCTGCTCATAAAAGGGCACAGGAGGC------CCTGGG---CTCTGAGAGATTGTGAAGATGAATGAGTGGGGCCCAGCTTGGAGAGATGTGAGTGGTTCTCTGCACTGACTGTATTACAGAA-------CACGGCTGCTGTGGCCACGAGCTCTTAGGACTCAGTCACTGCACT-GTCACAGAATGGGCCCTGTTGCCCTGTCCTTGGGAGACT--------------------------------------GGCATGGAAAAGGACCTATG--------------------TTTTTCATGCTTTTGACTGCTGTAGTGCAGGGTACCATAGTGACGGGCACCATAGAGATGAGAAAAATTGACTTTTACTGGCTTGTCTTTTCATTCCAGGGTCCCTCCCCAACCTGACTCCTGTTCCCCCATCACCCCCCCACACAGACACTCACAAAGCTCACAAAGGTCAGTAGGTCCAGGAGAGAAGAAGGTAGGGCCCTGGGTAAGTAGAGCAGATGAAATGAG------AAAAGCCTACTCACT---TTTCCCTCCCTCTCAGTCATCTCCCTGTCCCTTTTTTCCTCCTTCCTCCCATT a score=42723 s mm7.chr15_random 2987982 1079 + 7075849 GGGAGTGTTCAATTTTAAGAACTCGAAAG-----------------TCCTTTAAGCAGAACTGACTTCTTAGTGGGTAAAATAACACTGATTAGCACAGCGCCACAGAGAGGCCTCCGAGGTCGGATCTCACATCCCCTTTGGACTTTGTCTGCAGGCAGCTAAGCACTCAGGAGAAAATCC--TCTCTTTCTGGGGCTTCTTTAGC-GCATCATTT-GTGAGGGGATTGTTATTAGACA-AATACAACCACAGTCGGCCGCACTTATAGT-CTCTTATCTGAGAC---TCTTGAAGTTTCCAGCTGATCTTTTCCTATGCCTGATTTTCCCACACCCCCGAGTCACCACCATTAAGTTAAAATAATAAAATAAACAAAAGAAGGTGAAGGGGGAGAGA-----GTCCCTTGTGTTGCTCAGCAAGAGTTAGGTGATTTGTAAGTTTCTAAAAATCCTTCCAGCCCTGCTTATTTTGACAAAACTACTTAACACTTCAAGCAATGAACTACAGGGCATAAAAGTATAATCTGCAGAGAAAAACCTTAATCCTCTGTAGTAACCCATTTGAATCTCCTCAAACACATTTCCGCGCGGAGGCCTGGAGAATTAAGTCAATTGTTTGATCTAAGAAGAAAGGCAATTAGGGCTCTCTCTTGATCTTTCTGGCTAAATTCTAGTCAGGGGCAGCCACTGTTCTTGGCAGCTGCA--GGAGTGCCCTATTGCTGTAATAACAGAGGTGAGCACTAGACTCGTCACCATTAC--GTCTGACTGCATGTTCATTATGAGTTGTTTTATCGGAGAGTTTCAAATCACAACGGGCTAATACGCAGCATGCAAATGATGAGCTGCCGGATTTT------------TTTAAAAAGCAAAAACAAAAATAAAAGGTCCATTTGAAACTTTCTCCT----------AATAT---------AAAGTAAAAGGACTT----------------GGTGCTGGGACAGCTG-GATCACTTACCATGGGGTTCCTGGCAGAAATGGGGGAGGCGCGAGAGGGTGCTTCTCTTCAAAGGGAAGTCTCTGGG--CCCCAGCTTTGGGAGTCA-----GGAGTAACTGCTGG--------------------GGCAGTTTCATTTAGAATTAAACTCAGAACAGCGCCCAAAGTAC------------------------------TCAACAGCAGCAGT s bosTau2.chr20 15449166 1152 - 42952723 GGGAATGTGCTGTTGTGAGAAAATGAAAGCTTATTTTGCCACCAACTCCTGGAAGCAGAAATGAAGTCTCAGGGAGTAAAATAACCCTGATTAGCATGGCACTACAGAGAAGCCTCCAGGGTCTGATTTCACAGCCCCTCTGGACTCTCTCTTCAGGCAGTTAAGCACTCACAAGAAAATCCCTTCTCTTTATGTGGCTTCTTCAGCCACATCATTTTGTGAAACAATTTTTGAAAGACGGAACACAAT---AAACCCCCACGCTTGTGTTTCTCTTATCTGTGATGCTTCTTGAAATTTTCAACTAATCTTT-AATATGCTTAATTTCTGCCC-CCCCCAAACCTCAACCATTAA----------------AAAAAAAAAAAGGTGGGGGGTGGAAAGCTGACGTCCCTTGTGTTACTCAGCAAGTGT---GTGATTTGTAAGATTCTAAAAATCCTTCCAGCCCTGCTTATTTTGACAAAACTACTTAACACCTCAAGCAATGAACTACGGGGCATAAAAGTATAATCTGCAGAGAAAA-CCTTAATCCTCCATAGTAACCTATTTGAATCTCCTCAAACACATTTCGGTGTGTAGGCCTAGAGAATTAAGTCAATTGTTTGATCTGAGAAGAAAGGCAATTAGGGCACTCTCTTGATCTTTCTGGTTGAATTCTAGTCAGGGGCAGCCACTGTTCTCAACAGCTCCATTTGAGACCCCTATTATTATAATAATAGAGGTGAGCATTAGAATTGCTACATTTAAGGGTCTTGCTGCATTTTCAT--TGAGTTGTTTTATCTGAGAGTTTCCAGTGGTGATGGGCTAATGTTCAGCATACAAATATTAAGCTG--GGCTTTTTGTGTTTTTGTCTTTAAAC---------------------TTCATTTAAAGCTTTTTCTTTAGTTGGACACATATTTCAGCAGAAATGAAAGAAAACTTTCAGAAGCAGCTATGGGGAGGCCGGACAGATGTGTTCATTCATGGCTGGGTTGTGGACAGAGAT---------CTGATGGGG------TCTTCAAAGGGACGTCTCTGGGGCCACTAACAATGCAAGACAGAGATGGAGAAGCCGGTTGGAGTAGTCATGAGGGAAAATGGGAGTTCCACCCTTATTT--GCTTACAGCAGTTCCTGAATTTCCACATAGGAGCAACAATGTAATCGGAGGTGCCAACTGCAGCTGT a score=7198 s mm7.chr15_random 2989108 557 + 7075849 TGACATAAAATTAAGCAAAGGTC------ACTGGTCTGTAGTGAAGTATATGGAGGGTGGTGGCTGGGGACAATGGGCGTTGGTGAGGAAAGCCTCTCCCATGCCACGGCTTAGTGCTGTCACCT----TCAACTTGTTTCTGAGGCTGTTATTGCCTTATCACACTCCC-------AAGCTTCT----------------------------------GCTGCTGAAAGGT-------AGACAAGTCCAGGGAGACAA--------AAGGCACCCTGCTTCTAGCTGGATTTCTCTGGGCACCTGGGGCACAGTCTGCATGTCC--ATTCCATGCTGAATTTGAGTGGAGATCCTGCGAGGGCAGCCGTGG-------TGCGGTGGGTTCCAAGGGGTCAGTCCCTTCACCTCAGTCTCAAGATTATTAGTCAGGAAGATGGTGTAAGGGAAGCCATGTGACTG--CTGAGGTCGCTGAGGCTCGT---------GTGAAGAGGAGGCCAGCTATGTTTATTGGTTGAACAGTGATAGAATCCACAAGTAACAGAAAACCGTGCGAGAAGCCGGTGCTTCCAAGGTAGATCAATGATGAACCTGCTCATCCAGAGC-TGTGGACCAGTGAGGGAAGGTAGGtg s bosTau2.chr20 15450550 608 - 42952723 TTATATGGGACTAAATAAAGATCTTCAGTATTTGTCCATAGCAA--------GGGAGCTGCTGCTGGAGATGATGGGATCAGGTGACTAAAGCCTGTCCCAAGACACCCATTGGTGGCATCACTGATGACCAAGCCTTTCCTCAGGTTTCTGTGG-TTTATCTCATCACCTAGAACAAAGCTCCTAGAGCTATTCTTTGTGCACTGATGTGAACTCCAGGCCTCAGAGAGGTCTGAGGGCAGCAGGTTCAGGAAGACGAAGGAGGTCAAGCTCCCCTGCTTCCTGCCAGATCCCACTGGGC-TCAGGCTCTCCTCCTCCAGCCCCGAGCTCCCAGCCAAGTCCAGGGGCAG-------GAGGGCCAGAGTGGCTGCAGATGCTGTGCTCTTCAATGGCACATTCTCTTCACCTCAGACTCAGAGGTCCTG--CAGGAGGGTGGCTCAGAGGAAGCTGGAGTTCTGCTCTAGAGTAGTTGAGGCTTGTGAAAGCATGGCAAGGAGAAGTCTGGCTATTTTTATT-------CAG---------CCCCCAGTGACAGCAAGCC-CACAGAGAGCCCATGGTTCAAAGGTGGATTAGTGATGGTCCAGTCTGCCAAgaccttgtggtctaacaggcaaagacgggtg a score=4761 s mm7.chr15_random 2991690 540 + 7075849 TAAGTATGGTGAGACTAGAATGAACCAGGCAG--AGTCTAATGACGAGCACTT------CATTGGAGGCCCAGGAAAAGACTGGCTGCAGTTAGTACCTGAGCTGAGG-TCAAAAGGTAAGAAAGGATTAGCAACGTGCTGGGGTGGAAAAGGCCCTGGAGGAAACAGGAGTGTGTG---------------------GGCTGGA---CAGTATG---------------TAGGCAGGGCTG-TGTCTGATT----------TTCATGCCACTCTAAGAAAGTTGGGCTTTACTCTAGAGGCCACAGGGAGGCCAGGAGAT-------------------------------------------------------------------------------AACAAATTACCACAAATTTAGCATCTTACAACTGTAGCTTTC------------TGACATA-AAGCTAACCAGCCCAACCACCTATTACAAaaaaaaaaaaaaaaagaaagaaaagaagaggaaagacaagaCACGAAACAATGACT----------GGGGAGAGGCTGTTCCTAAAATACGCCATTTGTCAAAATTTTCTAATCGCAAATCTAAAATTGAGGCTCCAAACCCAACCTAAAAGATACAGGGAAAGGGCAACTGATACCACTGGAAACCAGGGTGTTATGACCAAAAAATGA s bosTau2.chr20 15451171 669 - 42952723 taacaacagtgtgacaaatgtggctcaggcagggagcccaaggatatacacttaacctacatttaaggtccaagggaaggtctgctagacattgtttctgagctgaggctcagaagatgagtaagga--ggtggcctgtttgggaaggggaga----gaaaggAGCAGGTGTCTATGTATCTGCAATTTGTTCTCTGAGGCTGGAGTGCAGTGTGAGGGGGCGGGGCCAATAGGAGAAGCTGATGTCTGGGTGGGAGAGGATTGAATGCCAAGATAAGAAATTTGGGCTTTATCCTACAGGGAAAGAGGAACCCATGACATATTTTTAAACAGGATAGTAACACGAAATGATTAACCATTTAGAAAGACAAAGGGAAgtgttcactttccaatactgcaaaacaaatgaccacaaactcagttgcctaaaacaccatccctcacttagcCAAGGTGACACATGAATTAATCATCATGGTCATCTAGTCCCCCAA-----------------AGAATTAGAGAACAGGCACTGC-TGAATTGATTATTTCAGGGATGAGGGGAAAA------CCTGAAATACA-CATGTGCCATAGAATT-TAAACATAAGCCTAAACTCGAGCCTGCAGATATaatagagagaataaaggataaatgtgaatgacaccatgagaaagcaatgtatcacatgcagaatgtga a score=6041 s mm7.chr15_random 2992669 465 + 7075849 CAGGAACCTTATCTGAATTACTCCTTGAGCCAGCCAACTGCATGTCGGAA------------ATTAAAACTTGGTGGAAATTTCATG-----------GTGTCACAATACTATTTTGGCTAA----GTAAAATGTTTGACTTGA---AAGTCTTTTTGTCCAGGAGGGTGTGGTATTGTCCACATAGGCCATACCT-------CCTGAC-----CAGAACAAGACTGAACCCCAACCTTCCAGAAGGAACAAGTCACTCTCTC-CTGGT--CCTGTGTGGCACCTGACACACAATGGTAT------TTCCTCTTCTAGACAGTGAGCTCCCTCCCTTAGGGCAAGGACTTGGCTTTGAATTGTTACACCCGGGATGTAGTATATGCTACAAATTCTAGTAAACCTCTGAATGCAGCGTGCTCTGAGAATCCCTAATTTGTGCGTAGGA-------CCGTTTCATGGCTGTCA-ATTTTAACATCTCCCAATCTGCACCCAGAGGA--ATTTCTG----ATACACAAGGAT s bosTau2.chr20 15452574 500 - 42952723 CATGGGTCCTGTTTGAATCATCACTTGGACACACCAGCTATACGTTTGAGTATGGGCTGGTTATTAGAAGTTATTCAGGAGTTCTTGATAGTTTTTAGGTATCATAATGACACTGTGGTTAAAAATGAAATATGTTTGATCTGAGAAAAGATATTTTGTCATGGGGAGTATGGGATGGT----GGAGTCAATAGCTGGGTGGATTTGATGCTGTCAAAATAAAACTAAAGGTGGGTGTCCTCG---GACCCACCCTCCCTCTCTCTGATTCCCTACATAACGCCTTATGTGCACGCGTATACAAGCTTCCCCTTCTCAACAGTGAGATTCCT----GAGAACAAGGATGCTGCTTT------------CAGGATTATAGTGGGTGCTACAAATACCAATAAATCTTAGAATG-AGCGTTCTCC--AAACCCCTAACCCAAATTTAAGAATTTACTTCATTTTGTGACTATTATATTTTATCATTTC----TTTCCATATAAAGGAATATTTCTGAACCATATATAAGCAT a score=43037 s mm7.chr15_random 2993686 1905 + 7075849 ATTATATATATAAGGGACACTTCCAGGTCCCTAACTGGTTCTTTCCAGTCCTCCTCATCTTAATTCA-ATGATGTCCTTTCAGGGAGACTTCTTCTACCACCCCGATTACAACTGCACCCACTAACCTCCCTACT-------GACTGTGCTCTG-----------GACATAGGGCGCTCT----CATGTTAGCA------------------CACGAGCCCCCGAGGTGTAGGTATGGCCTGTGTTGTTCATGGCTGCGTCCCT---GCATG---CAGTGC-----ACACCGTGGGCATTTGCTCCATGAAGCCCGCTGAAATCATGAATAAAAGCACATCTGTCTTACAA-----GTTTTACTTTGGTTAACAAGAAACCCTTGATGTTCAGTGTAAAATAACTTTTAAAA---TGTCCTGTCTCTTGAC--------------------TGGGAGACCACAAGAGAAGCTGCT------------AAGCTACGAGGGCTTTCTTCCTGACTCCTAGACCTTTGTGCCCATCCTCCACACACAGAAAATCAAATCCAACTTCAGGAGACTGGGAAACACTCCCAAAGTCTCTCTA----------------------AACCCCACAGAGAGAGCAGCTGGTTTAAAGGATGTTCCGACTCAGCACAACAACTTCTTGCCTATTCTGATGTCTCAGAGAATAGGTGTAACTCAGAC-CGAGTCCTCCTCTGGCTCCAGTAACTGGTTAGAGGCTGAACAGGCCTCCCTTAAGCAGGACTCACCGCACTGCTTGGAATGGGTTAAC--------TCCAGT----------ATCAGTACCA-GATGAAAGCCGGAAAATGTGATCAATAATACACATTTCAAAAGAGTAAAGCTGTTACTACAGGCAGTGGAAACAAATAATACCTGGTAAAGTGAGTATATCCCTTGCTAGCTGACAGTCTGAAGTTCCCATCTCAAGCAGAAAGCAA-----CTACTCCATA--GAACATGCCTGCCTGAATTTTATTCTTCAAAGAGCAAAATAAA-GGGAATACTGCACGTCTAC------------------TAAAAAGAAATCGAATACTCTGTAGCAAAGACCATCCAGCTAGAAACGGAACATTTAATCATTAAGACAACAACCGCAGTGTGG-TTTGAGTTTTATTTCAATGGGCACACTTCATTCATTGTATAAGGGAAAACCAGGCTAGGTCTCGATGGGCCACAGTCACAGTTCTTAGA-AAGGCAATGCTCCGCCACTCC------TGCCCTCGTTTACTTCTTGATGTCTTCAGCCTCCTCCGGCTCTCTCTCCTGATGCTCTCTTTCCCACCTCATTTCCTTTAACTCTTGTCTGTATTTCCGCTCAATGAACCGCTTCTGATGGGCCATCTGGGGAAAGTTATCTGACACAAGGAGATATGTTTAATACTTAATAAAGGATATCCATGGGTGCA-GGGACGA--CAAAC------AAACACGCACACAGGCACACATGTAATCAGCACCCATACAGAACTGCACTTTATAAACCTGAGG--CTAAGGATGGCTTATTTTCTTCCTTACTCTTTTGTTATACACATACATACACCACAAGTCTGGATTGGCGACTCAGATTCTAATTTCAATATCTGGTGTATGTAAAACAG---ATTAAAAACACCAAAACATACAGTGACTTAAAAAACAAAGTCATAAGGTTCTGGTAGGTTTCCAAACAGGCAGGTGCTTTAA-GCAGCATTCTCTACAATGAGTGACTTCAAGGGAGACAGAAAGAAAGCAAGCAGGAATGTGGGGGTTTATGGCTTGGAAAAGTTTAGGCTAAAAGCTTTCAGCAAGCGCCACTAGCGTAGCCATGATTACATGAAGGAAAGTT-----TTCCAGAAGAGCAGAACCGTGTCA----GGCACAAGGA--AAGCCACATTCTAAGCCCCCGAGTCCCTGACCAGTTCTATCTTTAGTG-CACCATAAAAGGCTCACAGACTTTGCTCTGCACAGGTAAGTCTTGTGAA-----------TAGGGGAGGGACTGTGCACTCAGATGCTGCATA-TAGAAGCTATATTTAgtttga s bosTau2.chr20 15460808 2023 - 42952723 atcaggtgtaAAAAGAAACcctccagatagctaatgggtcactc----tccttcccatcttaattcatatgatgccctt-ctgggcggcttccccagccacct-gattgaaaatggcaccatgttactccctactttattctggccatcatctacgtcaccttgtgacataacacattttatttcctgtcattgtgtgtcttccttcactagcacgctcccccaagggcagggaat--tttatttttttcactgctatagccccagggcctataacagtgccagacacaaagcagacattcacta---gatatccattagagtaatgaa-AAAAACATATTTGTTTTAAAAAAGAAGTTTTGTCTTTGTTAATAAGAAGCCAGTGAGGTTCAGTTTAAAATTAACATTAAAAAGATGTTACATCTTTTAATGCAATGTTAGCCCTTTATTACAGGGACCTAATAAAGGAGCTGCTTGGAGCTGCCAAAAGCTATGAA--CCCTCCTCTT-----------CCTTCTGCCCACTCCCTCCCCA-----AATCCAACATAATTTCAAGATATTCTGAGACATTCTTGAAGTCTGTCTATAAATTTCTAAAAGGGTCCACTGACCCCAGGGTAAGAGCACCTGGTTTAAAGTGTCATCTGGCTTGGAATCATGATTTCTC-CTGATTCTAGTGATTCAAGGAACATATGTGACTCAAATATCAGTCTTTCCCCCTC-CCATTAGCCAGTTAAATGTTAAAGGGATTCCCTCTACAAAGGACTCAC-----TGGTTAGTGAGGGTAAGCATAATGTTTGCAGCTGAGAACCTGATAAACACCAAGATGAAAGCTGAAAATGGAGATTAATC-CAGAGATTTCAAAC-AGTACAGGTATT--TATAG--AGCATAATCCAA--ATATGTGGTAAAGTGATTTTTTTGCTTATCCACTGAAAGTCTGGAGTCACAGTCTCAGAAAGATAGAATAGGATCTAGTCCACACAGAATATACATTTTT-AATTTTATTGTTTAAAAAGCAAAATAACTGGGAATA-GACACATTTATCCAAGTGAAGTTTTACATTAAATAGAAATCAAACACTTTGTAATAAAGGCCATCCAGCTAAAAACCAAATATGAGATCAGTAAAACGAGAAT---GATGTGACTTTGTGTTTTATTTCAATGGGCAGCCTTCATTCAGCGTCTCCACAAAAACTAGGCTAGGTCTCAATGGGCAGCAGTCACAGTTATTAGGCAAGTAAATACACCACCACTTCCGTCCGTGCCTTCCTTTATTTCTTTATGTCTTCGGTCTCATCTGGCTCCTTCTCTTGATGCTCTCTTTCCCACCTCATTTCTTTTAACTCTTGTCTGTATTTCCGTTCAATGAACCGTTTCTGATGGGCCATCTGGGGAAAGTTATCTGACACAAGGAGATATATTTTACACTTAATAAAGGAGAGCTACCAGTGCACAGAATGATGCAAACTAAATGCAACACACACGCAAACAAACATGTATTTCACAGGAATATAGAGTTGCACTTTGTAAGGCAAGAGAAAAAAAAATTGCTCATTTTCTTC------------TAGCATTCAGGAACACAGTGGAAGTCTGCGTGGGC-ACCTGGCTCTGGATTTCAATGTCTG----ATGTGAACCCGAGCATAAAAGGCACCGGAACACACAGCTGTT---AAAACAAG--CGTGTGACTTCAGCATGTTTC----CAGCTAGGTATTTTAACACGGTTCTCCTAGCAACAAGTGACTTTTAGGGAGAGATTAAAGGCTATAGCAAAAAT---GAGTTGTATATTTTTACAAAGCTTAAACCCAAAACTTCAAACAAATAACAATATTATCA-CATCATTATTTACCAACAATTTCCCTCTTTCTGAATAGAGGAAAAAGATCAGACGGACAAAAGGAGGAGGCCACATCTTAAGTCACC--GTTTCTGA-TAATTCAATCTGTGAAGTTTCCTCAAGAGACCCAAAGCTTATGA---GCAATAGCAACCCAAGTACAGCACCTTCATTTGGTGAAAGGACATGTCGCTCA---GTAGCACAGCTGAAGCTATATTTAGTTTGA a score=9997 s mm7.chr15_random 3062592 460 + 7075849 AATCAGTTTCATAAAATCAGAGACCAGCTGTTACCTTTGTGTCATTTTTACCACTCATGAATCCTGGCTTCTCCTCTGAATATCAGCAAACAATTTCTAAAACTCAGAAGCTCTGCATGGAAACCCTGACTCATATCTTGTTTCCTTCTGTGCTAAGGAAATAAAATTATAATGTGTTTTATATCATACTAAGAATCCCCCATCATTTTTTTTAAAATGTTGTTGTGAACAGCAAAC---TACATAAGCA--GATACTCTGCTACATATAAAATATTCGAACC--AGATAGATACATTATGTCAAAATATATGTGAAATATGCCAAGACTTAGAGGCTTTATA---ATAGGGAGTATAAAAGAATATATGACAATAAATCAATTATCCTGTCAAAGGTAAAACATTATATCAAAA------CGGTTTTCTATGGGA----ATGCTTAACAAATAATCTTCAAATAAAAATTGAGAAAGAA s bosTau2.chr20 23591155 468 - 42952723 AATTGAGTTCATGAAATCACAGTTCAGTTGGTACTCTTCTATCATCTCT-CCACTATGAAATACTGGTATCTGTACTTAATGTCAGTAAACAATTTCTAAG--TTAGAAGCTCTACATGCAAGTGTTGATCAAGAGTTTATTTCCCATTATGTTAAGAAAA----ATTGTAGTGTGTTTTATATTACACCCAAACCCCCCAATCA-GTTTTCTAAAATGTTGCTGTAATATACATGCCTGTGTATAAGAAACAATAATAGG----GTTTAAAGCACTTAAACCTATAGTAGTTACTTTATAGGAAATAACATGAGTAACATACTGTGATCCAGACACCTTTTCTATATAGGGGGGCAAATAACACAGCAGTAAATGCATTTGTTATAAAACCACAGACAAAAAATTATACAGGAAACCAGTCAATTTCCTCTGTGAGTTGATATTTACCAAGTGATGTATAAATACAATGTTTGAAGAAA a score=8310 s mm7.chr15_random 3063406 446 + 7075849 GAAGCCTCTGTGACATACAGGGAGCTGCAGCTGAATATGGAAAGAATAACTAGGCTATGATGTATTGCACCAAAGGGCATGCTGAAAAACTACCTAGCATAGAACTTCCTGTCATTCCT---ATTCCTCAGTTTTGTTATTTAATAACTTTATATTAAATAAACATAATCTATGTATATGTTTTATACTTGAGA---AAACTTTCCTGGGCAAACAAGGAAGTCAGGGTTGGGACCCTA---------TTTACCTATCTCATGTTCAGGAGATGGGCAATGTGAAGAATTTCAATGCAGAGTTGGTTTTCACCTCCAGTTAATGGGTAGTTAATTCTTTGTTGGACCAATTCAT---GCTTCCATTGTCTT---TATAATAGACT---ACATTTTTAAAAACAAAACTATACCATGGATATTTTTGTACTTGCAAAGCAAGTGCATTCCACTGATGGAGTGGAATCCACA s bosTau2.chr20 23595871 443 - 42952723 gaatccCATGTGAGCTATAGAGAGCTGCAATTGACTTATGTTAAAATTTTTAAATTACTATCCATT--CTTAAAGTTAATTTCACAAAATCCTCAGGGGTGGAAATCTATATTATTCTTTTTATTCCTCAAATAAAACATTTAATAACT----ATTTACTAATTATAATTCATGGATATGTGCTACATCTGAGAGGAAAATTTTATATTGCATATATG----CCTAGATTGAGTCCCCAGTCACTTTCTTTATCTATTTAATG----GTGGGTGGGTAATACAATTAGCTTTAATGCAACATTCATTTTCACCTAGAGCTAATGAACA--TGATTCTTAGGTAGTCTAACTCATTAAACCTTAATAGTCTTACTTATAATATACTTAAGCATTCTTG----TAAAATTATATC-------TTTTCATACTTAAATAGCAAATCCATTTCATCAGTTGCATGGAATCAATA a score=21179 s mm7.chr15_random 3063857 432 + 7075849 ACTAAACTCAAATATTTTTAGAAGTGGGTGTTGATAAGGGCTGCTCTCTGGTTAATG--TAAGTAGAAAACAAGGTCCAGTCAAGGAAATGCCCCTGTCTTAGTCATCTGTCTGTGTTTATCACTGTGAGGAATTCAAAACATTAGAGTATCTGTAAAGAAGGGAGAAAA---CTGCCACGGGAAATAGAAAGGAATGAATAATGAACTTGGGAAGAGTCACAGGAAGATGACGCTTCACTAGAAAACAATGAGACATTGTGGGGTTGATGTTAAACTATTGCTCAGAGATTTGGAATCCCAAGAAGCTGGAGTCTATTA-------TATGAATAATAAGAAAGCAATTGGTCACACAGTGACTTAGGAATAATTTCAGATATTTATGTAAC--AGTCAGTAGGTCATGAGAATTCCGTTATGTTACATTAGGCTGACtttattta s bosTau2.chr20 23601144 443 - 42952723 ACCAGTCTCAAATATTTCTAGAACTGGGTGGTGATAAGGGCTGCTTTCTGGTTAGTAGTCACATATGATACAAGATCCACTCAAAGG--TTTCCTATTTCTAATCATTTGCCTGTATTTGTTACCATAAGAAACTTAACAATTTGGACTAGCCATTGAGAAGGGGAAGAAGAATAGCCAGAAGGAAAGGAAAAGAATGAATAATGGACTTGGGAAGAATCATATGAAGATGACTCT-AACTAGAGAATAATGAGACATTGTGGAGTTATTGGTAACTTATTGCTAAGAGATTTAGAATTCCAAGAAGCTGGAGTCTACTAGGTAATGTGTGAATAATAAGTAAGAAATTGGTCACATATTGGCTCGGGGATAATTTCAGTTAATGATGCAACAAAGTCGATAGGTCATGGGTGTTCCATTATCTTACATTCAGCTGAACTCTTTTA a score=7702 s mm7.chr15_random 3167877 617 + 7075849 TCACTGGCCCCTCCCTACAC---CAGGCCAAACAA-------AACATGG--GGTTGGGGCTGCACACAGAGGACAAAGGGCAACCCTGGCACACCTTTATAACATGGCAGAATCCAAGATTGGGGCTTCCTGGTCCTAGGTGTTGTATTGAGTGT------------TGTTCATTGGTCTC-------TGGGAAGCCTGGGCAGCAGTGGGGCAGCCATGGAGCTGCTGACTGGGACT-------GGCCTGTGGCCATATTCACAGTCATCTTCATATTACTGGTGGACCTGATGCACCGGCACCAGCACTGGACTTCTCGATGCCCACCGGGCCCTGTGCCATGGCCTGTCCTGGGTGACTTGCTGCAGGTGAACGTATATAACATTCCATACAGCTTGTACAAGGTCAGTGACTTAGTGGTGGATGGTAACCAA----GGTTATGATGTCTGAAT---CAGCCCATAGTGGG-----GGTCGAGCCACAAGTTAGACAGGGATCTGGCCACCAAAGTTGGACTGGCTCAGCAA---TTTTTGGTAGTAGCCAT----------------------TGGGAATTTCTAGGAAAAAAGTTTTGAG-GGTCAAAGTTTAGGAACTGAAG-----------------CAGGATGTGACT----------------------------GCCGGGTTCACTCTAGTAGGAAAGGGCAGCAGCCATAGAGGTTCTAGATCTCT s bosTau2.chr5 7874596 712 - 76426644 TCCTTGACCCCTCTCTGTACTCTCGGGCAACACAATCTCCCCGACAAGACAGCTCAGGGC-------AGAGGCCAAAGGCCGGTCCTCCGCTCCCTTTATACAGAGGC-----CCCGGACTGGTG------GAGCCCCGGAGGTGGAGTGAGAGTGCCCTGCTGGCCTGGTCCTGGGTGCCGGCGTGGTGAGGAACCCAGCGCTCGAAGAGGCAGCCATGGGGCTGCTGTCTGGGGACACGCTGGGGCCCCTGGCCGTGGCCCTGCTCATCTTCTTGCTCTTGCTGGACCTGATGCACCGGCGCTCACGTTGGGCCCCACGATACCCACCAGGCCCCATGCCGCTGCCGGTGCTGGGCAATCTGCTGCAGGTGGACTTCGAGGACCCACGTCCCAGCTTTAACCAGGTGAG-GACGGAGGGGTGGGGAGTGCGCAGCGGTGGTCCTAGGGCCCGACCAGGCAGCGGACAGTGGGCGCTGGGTGAAGCCACAGGCCGGAAGAGGAACTGGGCCAAGAAGAGGAGGCGGATCCGAGAGGCTTCCTAAGGGAAGGCGTCTGTTCAGGGCCCAAGAAGAGTTTGGATTTTCTA--AACAGAGGTCAGAGAGGACAAAGGCCAGCAGGTGGGGGGTTTACAGCATGGTAACAGGCTGGGGATTCAGCCGGCCAGCTCTTAAATTGTGTGAGCCTGAGTCACGTTAGGAGGAAAGGTCTTGAGA-ATGGGGG----AGATGTCT a score=3910 s mm7.chr15_random 3168811 259 + 7075849 CTTGCTCATGTTTGCT-----------------------------------CAGTGAGCCTGGTTGCATGCTCTTTGAGGACCTCAACTTCCTATGTTCTCTGTCCCTCTA--CTTCAGCTTAAAAAGAGCTGTGGTGACATGTTCAGCCTGCACATGGGCTGGAAGCCCATGGTCATGATCAAGGGACTGAAGTCAGTGCAGGATGTGCTGGTGACCTGTGGAGAGGACACCGCTGACTGCCC---TAAAATACCTGTCTTTCATTACATAGGCTGTGGGCCCAAAGCTAAAGGCAAA s bosTau2.chr5 7875582 296 - 76426644 CTTGCAGTTGCTTGCTGCTGGAGGGGGTCCAGAGGTGCCCAGAGGCTAATGCCAGGAGGCTGGGCCCACAGCCTGGCGGGGCCTGGGCTTGCCAAACACCCTCGACCTTTGGCCTGCAGTTGCGGCGCCGTTTCGGGAACGTGTTCAGCCTGCAGCAGGTCTGGACACCGGTAGTCGTGCTCAACGGGCTGGCGGCTGTGCGCGAGGCGCTGGTGTACCGCAGTCAGGACACTGCCGACCGTCCACCTCAGGCAC---TCTACAAGCACTTGGGTTTCGGGCCGCGCGCCGAAGGCAAG a score=37810 s mm7.chr15_random 3169109 2906 + 7075849 AGGGGACAGTG-------------AGCAGAGGACGATCAGGGCTCAATGCAGGTGGTAATGGAGAT------AAGAAATTTAAAAAATAAAGT---GCCTGAAATCCATTGTGGAGCCTCCTTAGCATGG-----------------------------AGGCTGGTAGAGATGTG--------------TTTGGGGGGAAGGGTGAGGT---TATGGG-----------AAACACTGATCCCAGAGGAGAAGAG------AAATGAGCT------GGGGAGAGGACAGTGGTTACCCACA--GATGGACCTGCAC---------GTGTAATCCTTGTCCCTGACCAGCCTGAGTGGCAAGAGCAGAGACAATTCTCTGTATCCACCTTGTGCAACTTCAGTGTGGGCAAGAAATTGCTGAAGCAGTGGGTGATAGTTGAGGCTAGCCACTTGTGTGGTGCCTTCACCGCCCAGGCTGGGGGGTGA-TGGGTGT--GGACTGCAAG-----------TGGG----------------GACAAAGACATAGCAACAATATCCTGAATTTAACTTGCATC-TCCAATCCCAGGGAGTCCACAATCCTTACC-------ACCTCCTAAACAAAGCCATATGCAATGGGATTGCCTCTTTCATTTATGCCTGACGCTTCAATTATGGAGACCCTGATATAGTCAAGATGCTAATAGTATTGAAAGAAATCATTAAAAAGAAAATTGGCTTCATCCCTGAGGTAAAAGGATCAAGGGTAGTCTACAGAGTGAATTCTGTGCTGTCCATC------TTCCAGGAGGAGGCTGTGGACAGGGGATTTG----GAAAGGAGACCTCTAGAAGTGTCAACTACAGGAACAGGAGTAAGAAGCTTGACAAGCCTGCAGCAATGGGAGAGGAGAAGTGTACGAAGGTTAGGCCCCCTAGAAGGGGGAAAACCTGGACCTCTGCTCACAGGGAAGCAATCAACATTTACGAGATTCCCACTACAGGGCTACTAGAGGATGAAGGTTAGAACTAAGATAAATCAGGGATGAGTGGGAACAAATAGGGCCTGTGTCCGTCATGGAAGACGCTGTAAAGTAAGACTGGCTGAGATCAACACTAAGCCTATGTACCCAGGATCCAGAGAGATGTCCATTGTGTAAGGAGCTTGCCAGGCAAGCAGGACTCTTGACTTTCATTTCTCATCCCATGTAGTGAGGTGAGAA---CTGACTCTGTATGTTTATCCCAGACCACAACATCTTTGTTTCCTCACATCATGTATACAGGAACACACATTGGAATAATGATGAATATTATTACTAGAATACTTATTTACCCAACTTGTTAAATTGAAGGAAGCAGGAAGGCCTAG---CACA---TCCTATGGCTGTAAC------AGGTTCTCAACACATTCCCAACTTGCCTGTGCAACCCAGG-TTGTCTGACA--GTCTTCCCTGGGCAAAAGATATTTCTCATCATAGTGGACAAGATGTTGACTGAGCTCAAGAGGACCTGGGACCCTGACCAACCACCTCAAGACCTGACTGATGCCTTTCTGACTAAGATGGAGGAGATGAGACTATGCGATCTAGTGTCCATTTTGCTGT-------GACTAACCCAG-------TGACACCAAAGTGT-AATCACCTGAG-TCATCGGA--AGGGTGT-------TATGGGG---CACTCCAGTCTCTACACGGAATCTGCTGTCCTCCTATGTCCTAGGCAAAGGGGAATTCTGAGAGTAGCTTCAGTGA-ACCATTCTACATCTGGTTATCCTTCACCTGTTGGATGCAGGGGTTGTGATGAGTTCAGTCACTCTGACCTGAACCCTGCTTCTCATGATCCAGTGACCTGATGTTCAGTGTGAGCCTCTCTGGGGCTGGGAAAGAGAGGAAGAGGATGGTAAAGGCACAGTCCTTAAGCTTACTTGGGACACTTGTGGTTTCCAGTGAT--------------GTTTATCCCACACTCCAGTAAGAAAGATGACCATATTTCTCCCA--TGGACCCAGCTTGTAACAGAGCAGTAGTAGAGGGACAAGGGGCACCATACT-GGGTCTCATTAACTTAGGGGTTGCTCTCTTTCCAGGCCAAGTACAAAAGGAAATTGATAAGGTCATAGGGCAGGTATGGCATCCAGAGATGGCAGACCTGGGCCTCATGCCCTTCAAAAAATCTGTCATTCATGAGGTGCACCACTTTGCAGACATCA-----CTGCAATACCTGCCACACAGGACTTCCCCTGACATCAAAGTGCAGGGCTTCCTTATTCCTAAGGCATGCCTG-GGTCCCTCCAATGTCTAGTCAGTGT----TGCCAGCTAGCAGCTGGCTTGATCTGACCAATTATG--CAGAATTGGAGTTTAGGCAACACAATTCTCAACTCAACAGA-ACCAA----CTTCTCCTGGGTTAATGTGA----GAAACAAGAGCAGGAA-----CTGT--ACTTTAGAATCCCCAGCTAGAAATGCAAGCAAGGTAAAATAGGGAAGAAGTGGTTGTAATATTTACTACCTACAAATACAGGTGACAGTGT----GGACATCTGTCACTTGTCACATAT-------CCATGTCATAGTATTAAGGAAAGG--TGAGAAGCTTCTGTGGT--GAGTTTATATGACAGCATCCACTGTGTGT--GGTAGAGGCTGTGCCGGTGAATGT--GATGACTAGGGTCTAGTAAGCCAT------ACCAAGCCTATATTCACGCCATGTGCCTCCTGACAGGGGAAGTCCTTCATCCCCAACCTGTGCTCCATGCTGAAGGATGAGACTGTCTGGGAGAAGCCCCTCCACTTTCATCCTAAACACTTTCTCGATGCTCAGGGCCACTTTGTGAAGCATGAGGTCTTCATGCCATTCTCAGCAGGTGACT--------GCAGTCTACTTGG-CTGCCTGCCTTTTCTCAGGGTGCCTTGGAGGATAGAGCACCAATCAGGTCCCAGACTAACTGAGCCCTCTT--CTACACACAGGCCGCAGAGCATGCCTGGGAGGAGCCCCTGTGCCCGGCTACTGGAGCTCTTCACTCTTCATTCTACCTGCCTCCTGCAGTGTCTTTAGCTTCTCAGTGCCCGCTGGACAACCCAGGTCCAGTGACTGAAGtgt s bosTau2.chr5 7876081 2825 - 76426644 AGAGGACAATGTCGGGGTGGGCAGGGCAGGGGCAGGCCAGGACCTTCCCCACGTGGCAAACAGGGTCTCAGTGAGTAAAATACAAAGTGGAGCCAAGACGGGCGCCTATAGGGGAGCCTCGGGAGCAGTGCGGGCCCACAGAGAACGGGAGCAGTCTCCAGACTGAAGGGGGTGTGAAAGTGGGAGGCATTTAGGACAGGAGGGCGAGGCCTGTGTGGGCGGGGCAGGGCGGAGACTTTTCCCCCAGGAGGCGGGGCTGTGAACAGATCTCCGGGAGGGGCGGGGCCATACCCTAGCCACACCTACGAGCCCACCCCGCCCCTAGGAGTGATCCTGGCGCGTTATGGCAACGCCTGGCGTGAGCAGCGGCGTTTCTCCCTATCCACCCTGCGCAACTTCGGCCTGGGGAAGAAGTCACTGGAGCAGTGGGTGACCGAGGAGGCCTCGTGCCTCTGTGCCGCCTTCGCCGACCAGGCCGGTGAGTGAGTGAGTGCTGGGGCTGAGGGACACGGAGGTCTGGGAGGTTTGGAAAGGTCTGGGAAAGAGATGGAGGCGACGCCCT------ACCTTGCACCGTCCCCTTCCAGGACATCC-----CTTTAGCCCCATGGACCTCCTGAATAAAGCAGTGAGCAACGTGATCGCCTCCCTGACCTTCGGGTGCCGCTTCGAGTACAATGATCCTCGCATCGTCAAGCTGTTGGACGTGATGGAAGATGGGCTGAAGGAAGAGATGAAAATAATGCGCCAGGTGCGGG-----AGG---------AGGAGGAGGCCTTGGTCCTCCATCGGGCCCCCCCTGGAGGAGGACTTGTGTAGAGGGCCAGCGCAGGAAAGGGCTTTCCCGGAAAGGCACCTGCAAGGAAAAGACTTGGACGTT------------------GGGAGAG-------------ATGGCAGACAGCCCAGA--TGGGAAAGGCCGGGC--------------------------------------------------------------GGGGTCAGCAC-------ACTTAGGGGTG-------------------------------GGAGTACGCTTTCA-------CTGGAAGGGACCG-------------GTACCCATGAT--------ATGTACATT-------------------------------TTGGTTTATCTTTCTGGGCCTAGG--GCCAGGAGAGAGGGGCAGGGTCTG----------------------------------------AACTTAGAGAGGAACA------AGGTCAATGGTGGAGACC----CTGGAGGAGGCTGGGACCTGACTGGTAAGCACCTGAGCACCAGGAGGTCCCAGGTTCCCAGGGCCCCATGGCGGTGACCCGCACAGGTGGTGGAAGCTGTGCCAGTGCTCCTGAGCATCCCAGGGCTGGCCGCCAAGGTCGTCCCGGGACAGAAGGCCTTCATGACCCTGGTTGATGAGCTGATCGCTGAGCAGAAGATGACCCGGGACCCGACCCAGCCACCCCGACACCTGACGGATGCCTTCCTGGATGAGGTGAAGGAGGTAAGGTGATCGGGACAGGGATGTGTGTTGAGGGCCCAGGAGGCAAACTCAGGCCTCTGTATCACCCAGGGATCAGACACCTGGGCTGACTGGAGCAGGGTGCGAGGCCATGTGGGAATTCACCTCTGTCCCT-----GAGCTTACCTTCCCGGTGTGACCCAGGCCAAGGGGAACCCCGAGAGCAGCTTCAGTGATGAGAACCTGCGCCTGGTGGTGGCCGACCTGTTCTCCGCCGGGATGGTCACCACCTCGACCACACTGGCCTGGGCCCTCCTCCTCATGATCCTGCACCCTGACGTGCAGCGTGAGTCTAGCCCGGGGTGGGT--GGTGGGAGGAGGACAGCCCGAG----GCCTCTGAGCTCGGTTGG------TTTGGCCACCAGTGGCAGCTCTGTGCAGGGGCTGAGCCCCAGCTC-------AGATGTCACAGCGCCTCCTCCGAGTGGACGCAG-TGCTGCCCGGGCATCAGGAGGAGGC--GGGAGCCCAGCCCTTGGGTCTGACCACCAC-GAGGACACTTGTTTTGCAGGACGGGTCCAGCAGGAAATCGATGAGGTGATAGGGCAGGTGAGGCGACCAGAGATGGGGGATCAGGCCCTCATGCCCTTCACCGTGGCCGTGGTCCATGAGGTGCAACGCTTTGCGGACATCGTCCCCCTGGGAT---TGCCCCACATGACATCCCGTGACATCGAGGTGCAGGGCTTCCACATCCCCAAGGTAGGCCTGCGGCTCTCCCAACCCCGGCTCCGCACCACCTGCCACCTGGTACCGCAGTGAGTGTCGCCAGGTGTGGCCAGGACTGGAATCCAAGCCACCCCGTCCTCATGGCCACAGGTACTGAGTGTCCCAGCCTGGGTGGGCGCGGACAGGAGGGCAGAGCAGGGCTGGCTCTGTCCACTCAAGAGCCCCTGGTCGG----GCAGGGAAGACAAACTAGA----------------------------------ACATGTCACAGTGTTGGAGGAGCCCGGGCACTGAGGAGAAGTAAGGGCACCCTGCCATGGGCACAGGGACGGTGCTGAGAAGCGTCTTGGGCTGAGGGTTACTTGAAGAGTCCGGGTGTGTGCCAGGCAGTGTGTGTGCCCATGTATGTTTGGTGGCAGGGGTCTGGGCACCCCCCCACCAATCGAGACCTCACCCATGCCAGACATTTGCCACCAGGGGACGACACTCATCACCAACCTGTCGTCAGTGCTGAAGGACGAGACCGTCTGGGAGAAGCCCTTCCGCTTCCACCCGGAGCACTTCCTGGATGCCCAGGGCCGCTTTGTCAAGCAGGAGGCCTTCATACCCTTCTCTGCAGGTACCTTGTGGGTGGGGGGGTGCCCGGTTTGCTTCCCCACCCTGAGGGGGTCTTGGAGGGG------------GAGACCCAGGCTCACAGAGCCCCCGTGCCCACCCACAGGCCGCCGCGCGTGCCTCGG-GGAGCCCCTG-GCCCG---CATGGAGCTCTTC-CTCTTC--TTCACCAGCCTCTTGCAGCAT-TTCAGCTTCTCGGTGCCTGCCGGGCAGCCCCGCCCCAGCGACCACGGTGT a score=4854 s mm7.chr15_random 3239074 420 + 7075849 attattttataGTAGATTATACATGCTTTATCTTA-----TTCTCAATTATAAAACCATATCAAATTTTTAGTGGTCATACATGTAGATCATTATATTGT--GTTATTTCCATTTTTT----TTCTAATAAA-CATTTTGTAATAAAAT---AAACTGTTTCTC-----------TTACAATAACA-----------CTTTGCAATGAACAGTAA----GGATATAAATAATCTTGAAATAACATGTTTGGGTATATTCCAAATTGATATGTAAAAGCTATGATGTACTAC---ATACTATGCATATACAAGTAGAAACTATCTAAAAACTATAATGTACTATATACTTTGCATATACAAGTAGAAAATATGAAAATGAGTAGATATACAGAGAGAAGCCTTTGTGA---------AATTTGTCATGGGAACTTCAAAAGTGAAACTAAGATTGTGTTTGAGAGTACgaggga s bosTau2.scaffold4965 39697 448 - 59124 ATCATTCTATATCAGCGAGTATGAGCTCTACCTTACTTGGTTTTTAGTTATATGGATGTATCATAGATTATATGGATAT---TTCAGATTATTACATTATTAGCTATTTCTGTTTTTTATTTTCCTATTAAAATACACTGCAATAAAATGTAAATCTATTTTCCACTGTGTATTATTACAATAATATGAAATATTATCTTTAGGATAAATATTAACATCAGATATTCAAAATC--AAGATACTATG-------AAATTTTAATTCAAAATTTAATTCCT-TGGTATGTTGCCAAATTTTATG-GTAAAGAAACTGTGGTGATCTAGAAATATGAGTATATAAGA----------GCATAAGGAGAAGGTATGAGAATGAATA-CCACAGAGAAAGAAACATTTGTCATTGATGCTTAATTTGTCAAAGAGACATGGTATTTGAAGTTGGGATTGAACTGGGAAATCTGAGGAA a score=20857 s mm7.chr15_random 3239605 531 + 7075849 TCTTTTTTTGT-TATTAATATGATCAGTGTTTGCCAAAGGCTGCTCCTTCAGACATGATTTGGCAGGATGTCAATGTGGCCACACATAAAGGTCATATTGAGAAATACTGAGCCAGTTAATCATTCAGAAAGTAGGTTATTACACTTGATTCAGAAAGTTCAGGAGTGTGTATGTTCTTTAAATCCCTT-GAACTTAGAAGACTTAACTACTTTAGTCATTCTGAGAAACAAGAACACCCCAATATGTAATACAACAAACACTaaatgattcgcttaaacccacacaggaagtcact-gtatacaggaatagaattaaaagttcctgatttccttccttctgctgatgtcactAAATCATTTGTCAAAACATCTCA--GTCTCTCTTTCAAAATCAACTGAAAACTTCTTGTGAAATACTGGGCTTATGTAATCGAACATACGGGGGGGGGGCTTTACTTAAACATTGCCACTGGCAAATA--------------------TCCAAATTTACCCTATA------------TCTTACATTTTCTTTCACCCCATTTTGTTTAATAGTTT s bosTau2.scaffold4965 40248 556 - 59124 TCTTTTCTGGTGTGTGATTATGATCAGTACTTCTCAAATACTGCTCTTTTA-ACATTATTTGCATGGATGCCGATGAGACCAGGCAAAAAGGTCATGCTGAGAAAGACTGAGCCTCTTCGTCATTCAGAAAGTAGGTTATTACCCTTGTTGCATAAAATTCC--ACCATGTATATTCTGTACATCCCTTCCAATTCAGGAGACTGAACTCTTTTACTCATTCTGAGA---AAGAACACCCCAATAAGTTACACAGCAAACAGtaagtgatttgcctaaacccacacaggaagccaccagtatacaggaatagaatcaaaagtttctgattcctttcctt-tgctgatgccactaA---ATGTGTCAAAACACTTCAAGGTCCTTCTTTCAAAGTAGACGGAAAACGTTTCATCAAAGTCTGTGTTTCTGAAATTCACCTTCTAAAGGAAGAATATT--TTGAAAAGAGTTGCTAGAAAACAAATATTGCAGTTATATGTTTTCCAAAGCTACTCTTTGGAAATACTAGCTTCTATCTCTCTTTTTCTATCCCTTTCGTTTACTGCCTT a score=4761 s mm7.chr15_random 3240248 351 + 7075849 ACCTGCCCTTGGAGCAAGGGATGGAAGGAAGCAAGAGCAAAACGGGGTCTGATATGTCATTCTTGAACAGCACGGAGCCGCCTCATTGGTCCCTGTG----------------ACTT---------CTCTTTAGTCAGTAAGTGAAAGGGAGAAAAAAACGATACACATAAATAATTGCGGGGAGTGAAAAGACCAGAG----CATAATTCACCTGTGACACAGTGAAGAAGTTCTGCAAGCAGACATCGGTGTTGTTCACGAAA-----AAGAATT---TGTGA---------TTATATTTAGTGCAGAAAAATTATACACCTCAAAATTACTGCAGTGTTAATGT-----TTATGGATATAATACTGTGATAAAA----TAAGATACTAGTTTTCAAGTAAAGA s bosTau2.scaffold4965 41007 401 - 59124 ACGCACACTTGGGGC-AGGGTCGAGAGGGAGCCATTCCAAAGGAGAGATCTGTGGGTCCTTCTGGGAAGGtgctatgtctgcccacctgacccagtgccaggatataggaggcacttgagacatggtcatttaataaataagtgaatAAGAAAAAAGATGCATTAAAAAGTATTAATatggagagtgactgcttcacagggtacaagatttccctttgggctactgaaaaagttttacaaatagatgctggtgatgtttgctcaacattgcagtattcactgcgatagtcattgtgatacttaatgcttttaaattatatacattaaaatgattacaatggtaacttttatgttatgtgtattttattatgataaaaaTGttaaaata----tttttaaattaaaa a score=44075 s mm7.chr15_random 3240621 1495 + 7075849 AGGACTACATATCCTTAATCAAGGATTAGTTTTGCCTCCT---------CATATAACTGGACCTACACA---GCATTGCTTAAAACACAATT-------CTAAGCACATTC----------AATGATACAGCCATATGTTTTTCATGACTAAAAAGCACC----ACAGCCCAAGCTTTAATGAACTCAC--------TGTAAAAATGGCATCAGTGAAATCTTTTGAATTAGGAAAAAAAAAAAAAAAAACCAACCACCAAATATTAGTATGGAAATGAAGGCCTCAGCCAGTGATATGTAAATTGTTTCTGTCAGAGACTGAACATACAGACAAAAACACTTATTTAGAAATAATACATGAGTCACTCTGACAGCGATAG-----------ATTCTTATTTGGCTTTGTGGTCGATGGAACTTCAT-CAGAAATGTGCTTTGCTAgctggggctgttgttctggggtagcccatttgtctggcttacacaagtccctgggttaaattgttaccaccacaGTTAAAGCACATGGAGAGTCAAAGGCATTCTGTGCCCCAAGAAGTCAGCAGGAGCTCCTGTTTCCACCAAGCTTTTGAGGACTGGAATGGAACCATATACAGACAGACACTCTTCCTTTGCCCATTTTAAAATTATGCACCTGTTTCCAATGATGGCTATCTAATCTTGTGTCTGTGTATTTTATTGATTCTTACCCAGTGTGTACTTTACCCATTGTATACTTTAAAAACAACAGGTTGCATTTGACTGAACCCTGCAGTCTC-TATTTGCTAGACGAAATGGCAGCCACAGAGAACTGTGACAAACTGGAGAGGTAGAGCTAAG---TTATATTTGAAGCTTCGA--------------GTTTACTCAAAATGACCCACTGCAAACATATGATTTAGATCTGTAAGTCATAAGTGCGGAAGCTCTGCCAGGCTCCATTATTTAGTCTTGAAAGTTCCATTATTTCCAGACATCCCAAAGGAAGAGACTGCCAAGAAA-GGGAGGAACAGAAGGCCCTTTCAAGAGGTGTCCTGCCAGGG-GATGACAAGACAGATATAATTTCAACACCATTCTAATTTGCTTTGCTGACCAGAAGGGGAAGAGCCCAGCTTTCTCCATCAACAAATACTT-CAGAACTGAGAACTCTATTTTAAAGCCTGTCAGACACTTAAATGCT--TTCTACTCTCCATACAAACCTGTATCTTCCAAGAGCCAAACACGACTGAAAATCTGaaaatatttataatgaatattataaatatttaGATGGACAAGGGCAGCAAAAATGT--CACAACAAGGAGGTGA----TTGAGAAACAAAACTTCTATTTT----CATCTAAGAAAATCATTTATGAATTCACATTATGATTAAATTATTGAAGTAAGACAACTTTTTTTTAAAAAATTACT-AAGTGAATTAGAGCTGATAGGAGAACATCAAAATAAATAC-TAGGGAATGTAAGACATTTCTGTGTCT--------TTAAGACTTGTCTAAATTTT-ATTTGTGTGTATTTAGAACGATATAAGTGACATTGAGATACATGATTAGATAAC s bosTau2.scaffold4965 41909 1413 - 59124 agggaTCCAtctacttg-ccactgattagtttaacttcttttagaacttcatctagatggactcactcatatgtactattttgtgtatgacttcttttactcagcatatttttgagattcaGTTTATACAGTCATAT-TTTTTCAAGACTAAAATGGAACTTACAAAAGCAAAGTTTGAATGAGGTCCTCCAGTGCTTACAAAAATGGCATTACTTAAATCTGTTGACTCTG-----------AAAAACACCAGCAATAAAATCT--------------AGACCTCATCGAGGGATATATAAAAAATTTTCA--AGTGGCTGAGCACTCAGA---AAACACATATTTAGGAATATTGCATGAATCATACTGACACTGAAAAGTACAAAACGCATTCCTGTTTTGCTCTGTGCCCTGTGGAATTGCACACAGGAGT---------------------TTGTTCTGG-----------------------------------------------------------------------AGTCAAAGATGTAGTGTTTTTTCTAAAGTCAGCAAGAGCTCCTGCTCAGATCAAGTCGGTGAAGGATGGAGTAAAACCAGATACAGGCAGA---TCTTCATTG------TTAAAAACCATGCATCTGCTTCCAATGATGGGTACCAAATCATCTGTCTAGATATTTTATATTTTCTTACCTAAAGTGTG----AAACGCTGTATACCT-AAAAGCAACAGGATACATTTAACGAAATCCTGCAATCCCCTGTTTTCTAGATGAAATGGCCATCACAGGGAGAGCTGATAAAACTGAATTCTATTGCTGAGCAGTTATATTTCAAGCTTCAATTCAAGTGCTTCAAGTTTACTTTAAATGACCTGATGCAAACATATGATTTAGATCTTTAAGTAAGAACTATAGAAGCTCTGCCAGGCTCCATTATTTAGTCTTGAAAGTTCCATTATTTCCAGACATCCCAAAGGCAGAGGCTGCCAAGAAATGGGAGGAACAGAAGGCCCTATCAAGAGATGTCCTGCCAGGGAGATGACAAGATAGATATAATTTCAACACCATTCTAATTTGCTTTGCTGACCAGAAGGAGAAGATTCCAGCTTTCTCCATCAACAAAATCTTCCACAACTGAGAACTCTATTTTAAATCCTGTCAG----CTGAATTCTCCTCCCACTCTCCATGCATGCCTGCATTTTCCAGGTGCAAAAAACTAGTTAAATTTTGAAAATGTTT-------------TGCATAGGTTGAGGGGGAAGTG-AGCAAATATGTAGAATAGCAAGAAGTAGAATCTTTGAGAGTAAAGCCTACTTGTTTTTTACCTTTATAGAATTCATTTA-----------------AAAATTAATGCAATAGAGAA------TTTGAAAGAAGTCCTAAAGCTATCTAGAGCTCCAAATTGACTCTCAAAGTAATTTCTTAAAGAATGTGAGACATCTTTGTTCCTGAATTTACTTCAAACTAGATAAAATTTTCATCTGTCTGAATGTAGAATGATATGGCTGATGGTAGGCTATGGAACTAGATGAC a score=3751 s mm7.chr15_random 3242131 203 + 7075849 TGCCTTTTTAAAATTTATTTAGATGAAATAATTTACTCACATGTCCACTCAGGAATTCATCAACATATTAGTTTATAA-GTATTTTCTTCTACAAGTGTAATTAATGTGTGAAATTACAGGTGGATTTGTATGTCAAATATTTTTT---TTTTACTTTTTTAtttcattggatattttatttatttactttcaaatgttatcccctt s bosTau2.scaffold4965 43347 192 - 59124 TAACTTTTATAAATCCATTGAAATAAAATAATTTAAT----TTTCCATTCAGTAATAAATCACAAAAATATTTTATAACACATTTTCTGGAATGATAGCAATTAAATTCTCAAATT----TTAGAATTGTATGCCAA----TTTTTAAATAGTATTTCTTTAACTGAGTGTAGATTTCAAACAATAACTCACA---GTTAACCTTTT a score=19458 s mm7.chr15_random 3307248 570 + 7075849 CTAATGTTTGCATTCTTAATGTTATGTTGTTGGTAGAAGGA---AGGCCCCAAGGAGGAACCATACTTTGTTTCAGTAGGTTTGTGTTTTTACCCACTTTTCTTGCATGAGATATTGCACCCTGTGAAATCACATAATAGCTGCTAAACAAAGCCTACAGATAAAATAATTTGACATTTCTTTGAGCA--------TGAGTCCCTCATGTTGCCTACTCTCTTTCTGG-AGACAGCGTCTCCTTCCTCCTGAGCCCTCATTTAGAAGTTACTTCTGTTTCAGTTACATTGAAGGTATTTCCAGGGTTTTCTGCCTCATTAAATGCACAAATCTCTA-AGATGTATCATCAAAATGAAAACTTTGAAAGGCGAGATCATTAGAATTGGTAAAAGAATAAAAAGAAAAGAGTTACAGTTTTGGCAATAGACCATCTACCTGAGGCCACATGGACTCTTTCCCTTGGCAACCATTCCCAGTCCTAAAGATTCTGTTCTGAATAATGCAAATATAATGCAAATCTCCCTCTTTTCATGTTTCATAAGCCACCCCAAGGTAGCAACTGAACAGTTT-----GTTTCTTTATGT s bosTau2.chr14 28299859 548 + 50711261 ctgatgttgacatccttaattccattttgcagatagacagactgaggcacaaagaagGAACCGTCCTTTGCCTCATTAGGCCTGCTTTGCTCTTCACATTTTTTCTGT------------CATGTGGGGTGATAGGATAGCTGTGAAGCAAAACATATATGTATAATCATTTGACCTTTCTTTGAACAGAAGTCCCTGAGTCCCTCATTTTCCCTACTTCCAATCCAGTAAACGGCTTTTACTCCTGCCTGAGCTCTCATTTACAAACTACTTCTGTTTCTGTTTTACTGGAGGGGTTTATAGGTTTTTCTGTCACATTAAATACAC--ATCTTTAGGGATCTATCACCAAAAAGGGAATTTTGAAA----AGACCACTAGAATTAACAAAAG-----TGAAAAAGAAGTTGGAGTTTTGGCAGTAAATTGCCTACCTGAGGCCACATTGGCTCATTCCCTTGGCAGCCATGCTTATTATGAAAAGTTTT-------------CATAAATAATTCAAGCCTCCCACTTAT-ACTCTCCATAAGTCCTCTTAGGGAGACAAC---ATAGTTTTTTGGGTTTTTTTTTAT a score=5832 s mm7.chr15_random 3308633 361 + 7075849 AATACAAAGGATAAAGAAAAATGAGAACATTATGAGTTATGTGTAGAATTTAATGGAAACACTGAATACTTCCTGGTGACATGTTTATAGAATTCTCCCCCCAAGTT--TGCTTTGTTCCCGTCTCTAATGCTATCTCCTTCTGCTCCTCG-AAGTATAATTGCTATGAGA--GCATCACCTTACTGAGC-ATGGTTTCTGTAC-CACTGATGGTAATAGTCTCCTCAGAATTCTCTGTCTGCCAA-----------------------------CATTCCTGAAGTCAGCAA--------------AGCAGCTCTAAGTTTTCTAGTAGCCCGATTGACTGTATTTTAGGGTCTCAAAGTAGGGTGACTGATTCAGAGGAATGGCCATATCACAAAAGTGTATGAAGCAA s bosTau2.chr14 28300608 405 + 50711261 AAGGCATAGTATTAAGAGCTCCAGCAATATGCTAGGTATTGTGC-GAATGCTAAAGAAATACTGGATACTTCCCAGTAAATTTTACATTCAATTTGCCACCTGAGTTTCTGCCCTGAACCT-CCTTTTATGATACATTCTTT--CTCTTAGAAAGCAGAGCTGCTCTGAGAGGGCACCATCTTAGCAACTAATGGTTTCTGTACACACAGTAGTTAACAGTCCACTTGGCATGCAGTGTCTGCAGAAAAACTGCTTGAGTGTGAGAGCTGGATCCCAGGCCAGAAGCAAGAAACTGAAGGAGAAGGTACCAGTTGTAAGCTTTCCACTTGTCTAGCAGACTGTATTTT-TAGCATCAAGAGGCAGTGGCTGGTGAGAAGGAATTGCCTTTTTACAAAA-TGTTTGAAGCAA a score=11323 s mm7.chr15_random 3309670 848 + 7075849 AAGAATGCAGTCTTGGCATCAGTTTCTTGATTGGAAAGTATTCGTCACACATGAGGTAGTGTTCTGACATAGGTAGAGAATGAAGAGGTTTGGAAACAGTTTAGA-----GAGTCATACATCATTCACAAAGCCACAGAATGATTTGGAAACAAACAC----ATAAAAACAAGACAGACTACAGGAATGAAAAGTGAGTACTGAGAAAACGTCAAGC-AAGGAGTAAATGCATGAGGAAAAAGTGAAAGAG--AGGAAGCATAT-AAAAATACAATTTTTAAAGCAGCCATAATTATAAGGG-CTTGGACCGGAGAACACTACACAATAATCCTAGATAAGGAATGAACCAGG---------------GAATACCCTACT--CATTTATAATGTATTGTCGCTAATATACTTGTAACTATGAGTTTTTAAACCTTTCCAAGAATGAAATAAAACATGAAAAAGTAACTGGAAACAGAAGAGAAACAGCTTATTACAATGTCGAATTATATTAGAGGAGAAGGGATGTGAATAAACCCCCAAACTTACAGAAATAGAGAGAACTGAGGAGAGTTATTGGGGTGAACTTCCTCCAGGGGTACAATAGATTGAGTTTTTAGGTTCTTGTTTTATAAGACAAGATGGGAAGTG----AGTTTTGCCATATCGCAACT--AACATCTATCTA--------AGTATATTAATTTTCTATCATGAACTTTA---CTTTCTTGCATTAAAATTGCATATATGCCATACAAGGTGAAATAATTGATGTTAATTTATTACAGTTTCCTAATAAGAAACAAGGGAAGAAAGAGGGAAACACTAAAAAAGTGGGAGAGAATTCTTAT--AATTGCATTGTATGATTATATAGTGCATATTAAAATCTATG s bosTau2.chr14 28301377 852 + 50711261 AAACACACATTCCTGGCAACCATGTCCAGAGACTGAAATGCTTAGTAGGCAGTGAGTAATGGACAGACCTGGGTAGAGAATGAGCATGTTTGGGAACATTTTACAACTTTGAATTAC---TCCTCCTCTGAGACACTCAATGACTTGGACATTGGCATGGAGACAGAAGGAAGATAGAATAGACGTAAAGGAATTGAGTGGAAGGAGAATGGGAAGAGAAGGTCCAAAAACA----GAAAGGATTAAAGGGAAAGGAAACTAATCAAAGGGATGCTTCCTAAAGCAGGTAAGAATATGAGGGACTGAGACCATGGAAGACACCACGATAATTTTGACT--GGGAGCAACCAAGAGTGTTTATTGGTCTGAACATGCTATTTATATTCATGGTGTATGGCTTGTAATCTGTTTCTAAATATAAACTATTTAATCCTTCTTAAAATGAGGTACA----GTAAAAGTAAATAAAAGCATTTCTAAAATA----ATTAGAATGTTAAGCTATACCA-AAAAAAGGGGGGGCAAATAAAAATAAAAGATTCAAGAAAT-----GAAATGAGAAGAGGCTTC--TGTGAACTTCCTATTGCATAACTATATACTTAGCTTT--GGATTCTGTTTTATAAGGCAAAGGGAGAAGTGATGTAGTACTGTTGAGTTAAAACTGCAAGAACAATCAACACAACAGAACAGTTTAAAATTTTAGCA-GAACATTAATGCTTTTTTTTTCTGGTCCTGAAAAAATTATGCAGCAGATAAAATAAAGGGCAGTGTTTTCATTATGTTTTTTa--aaaaaagaaagaaaggaaggaagaaa------------ggaaAAGGAATCTTATGAAACTGTTTTATATG--TATATA--GCATCTTATAATTTATG a score=3095 s mm7.chr15_random 3316826 104 + 7075849 TTTATCACACAATGTGCCCAAGAGTTTGAACATTTCAAGATGTGAGATGAGGTGTAGTGGTTCTCTTTACTTACAGATGTTTGGTTTATTAAGTTGTGAGTTTT s bosTau2.chr14 28329003 102 + 50711261 TTTGCCACAGAATGTGTCACATA-TTTGAATATTTCAAGTTGGTAAATGGAATATATCAGTTTTGTTCACTTAGATGTGTTT-ATTTGTTGAAAAGTACGATTT a score=11542 s mm7.chr15_random 3317098 498 + 7075849 GTTTTCCAGTGAACTT---TGTGAAACGAAACCTGC--TACCTCTCCTAGGTATGTATGGTGCCGTGG------------TCTAGATTAT-----ACTATTTTCTTAGTGTCTATAGCAATTTCTACTACATAATAGTTAGATAATAAT-GCTTATTAAATAAGGTAAGCA-AAAGGATGTATTTAAA---------------------ATGTT---------------------AGAAGTGTTTGTCTGAATTGTATATTTTTATATAGAGATATTTTATAAACCACATTTAAAAAAAATACAAGTTTGCCAGAGCTCTCTGaatattatatatatatatataCATATACACACTGCAGAAAATCTAAA----AGTTTATAAACA-TGT-CTACAA-TCTTGGTTATAGGTGTT-TTTATTATATAACATTTTCTCTGTAATAGAACAAATGTTGCCAGTTAGTAGTTTGGGGAAAATAGATGCCTCATAAAAATAAGTCATTTATAAAAGTCAGAGATATAAATAACAATGCCTAACTTAACCACGAATCAAATTTCCAATGATCTCAAA s bosTau2.chr14 28329405 553 + 50711261 gtttTCCAATAAACTCCTCTGTGAACCAAGGCCTATATGAcctttgccagatatttatagtcctatgaactgggacattttctggattgtgtattactatttccttagtgcctggaacaattcatggcatatagttgattatcaataaaagcttgttgaataagttaatAATAAAAGGTCTATTTTAATATATTAAGTAGATGTTGTCAATGTTCCATACCTGTTTCTTCTAGAGAAGGGTGTTTTTTTGTTTTGTTTTTTTTTAAAAAAAAAGCAACTGTGTAGCATTTTTAGAT----TACAAGTTTGGTAAAGGCCTCTGGCTATCATAGGTATAT---------TA-ACATTACTGAAAGGCCAAAGGTTAGTTCATAAATAATGTTCTTCAACTCTGGGCCATAGATGGCATTTATTACATAAAAAATACTGTGCAGTAGAACAAATATTATCAGTTAATAGTCCGGAAAAAGGCG-TGCTCTATAAAT----GTCTTTTATAATAGTCAGATATGTAAAAAACAACACTTGAATTAACCAGGAGTCTGTTTTCTGTAGATCTCAAA a score=8750 s mm7.chr15_random 3319561 356 + 7075849 ATTTTTTTCTCTT------AGATTACAAATTCCCAAGACTGGAGCATGTTGATTGCATATTTGGTCCCTTAACA-TGAAGACAGAATCAAGTGTAATGTCATTACACCAATTAGTGATACATGAGTAGGAAAGAAGGGGAATAGAATCCC--------TCCCAACCTTCAGTTTTTCTTTGATCTGAGTCATTTCCTGGGGCATGAGG----GACTAAGGCTGGACC-GTTTCTGGTGCCTTTGCATTTATATTCTGATTATGCAGCTTCTGATACTTTAACCCTCAGTGGGCAAACAGTCAATGATTATGGTTTACAGAATAAAACTACTCTTTCATATTGCTTTTATTCCTCTGGGACTCTCAGAAAGTATGTG s bosTau2.chr14 28331567 367 + 50711261 atttctctctcttcatattagacaggaagctttggagaatggactgtgtctatttaatatttgtttttgtagcacttaggaca---TCAGTTTCGATGTAGAT-CGTCAATAAG--ACACATGAATAGGAAATTTTGGAAATAGAATTCTATGATAATTCTCTACTGTTC-TCCCTCTTTGATTTGCATTATCCCCCAAGATGGTAAGAACTGACTAAGGCTGGACCAGTGTTTTCTGCCCTT-TATTTATATTCAAAAGGATCTACTTCTGAGACTTTA-CCCTTGGTGAGCACAGAATCAATGGTAATGGTTCACAGAATGAAACTACAATTGCACATTGCATTTCTTTCTGTGTTAATTTCAGACTATGTGtg a score=3248 s mm7.chr15_random 3381446 131 + 7075849 GGAATAGTCTCTGTCAAACAAAAAGA-ATTTATCCGTTGAGG-GTAGAGAAGAGCGTAAAGAAAGCAGAAAACCTGGAGAACTGGAAAACTC--CAACAGTTGCTACTAATACAGAGATCTCTGGCCCTGGGAGT s bosTau2.chr14 24720714 124 - 50711261 GAAACTGTCCCTGTCAAACAGAGAGGTATTTAT--ATTCAGGTATAGAGATGAGTGTGAAAAAA----AGGACCTTAAAGAC-AGAGAACTCTACACTCTTCTTTACCAATGCAGAGA----TAGCCCTGGAAGt a score=24893 s mm7.chr15_random 3382466 1232 + 7075849 TAGTGTTCAGTTTCATGAATCATTCTTTTTTCCTTCTCAACCAAGATGGCTTCTATTATTTCTAAATAAGATTCAT------GGCTACTTTATAAAGTAAATAAGTTGGTCTTTGGGATTGAGATGCTGCCTGTCCTGATTTGTGAGGTCGTATGCCCACCCCCATGTAATGTTACTATTGTAGTAGAAGCCATTGGTTAATTTAC-TGTAACCATAGCAGGAGCCTTTGGGAGCTTAGGACTCACATTGATTATCTGCAAAAGAGCAAATGGAAAGATTATTCTGGGAGAGGAAAATAGGATGAATTAGAAGAGA-------------------------------TGACATATT-----------------------------CAACTTAGACAAAATGTAGGAGGTCCAGAATGGAATGAAGATATGTGTTAGATTCAAGGACAGTTCATCTTTCTGGAAAAGTCATAACCGGAGGAACACCATCCCTTGGCATTTGGTTATGAGTAATGGATTGAGACTTCTCTCTTTTTCCAAGTATTTAATACAAAATAAATCTTCCATTTCC-TGGGCTTTTGTGAGTCTCTCCCTCTGAGAAATCCAGCTCATCTTTTGAAACACAAAGGCTTAAGTCATATTTCCAC-AAAATTGTTGTGACTAAAACAAAAATGGCTTCCAGTTTGACATTTCTACTCCAATATTTTGGGGTTTCATGATTCATGGGCTTCTGACAAATGAAAGTTTTTTTTTAAAGGGTAGAGGTTAGGGTGGTGTATAAAATCTGCATCTGTCTCATAGAATCACATGTCTGTAAGGAATAATATGATGTCATCTCTTCATATATCCTCCTTCGGTGCAACCATCCTAAAACCATCCTGCAGAATTGTGA--------------GTTTTATTA--AATAGCATTACTTGAATGTCTCCCTCCTTTACAAATACATGCA-------------------------------------AACTCTCA--CCGAAACTGAGCTTGGGCAAAGCAGTTCACTTACTAGTAGAAACACCCAGCCTTTATGGATTT-----AAGTGAGCTCCTCCAGATTGCACTGGCTATATTCCCACATTTCATAAGAAGAATCTCAATGGTTTCTAagaatcactcgggatggttgttaaacacccacattgctaggactccttcatactgatttagATTACATAAATCAGAGGGCTAGTTACTGGATTCAT-TTAGTCAACTTAAGGAAACAGTTTCCTTCTTTATATT--------CAGTCATATT--------------AATTAAGACTCCTG---------------------------TTTAACTCTGGGCATCTGCAAACAAAGATAGAAATAAAGAGTTATCCCTATCTGGATGCAT s bosTau2.chr14 24723001 1335 - 50711261 tgatacttagttttgtgaaccattgacttttccttctccctcaagccagtttctgtcattcataagcaggagtcctTATTTAGGTCCCTAAACACCGGACA-AAGTTG---TTTGGATTTGAGGAGCTAACAGCAATGACT-GTGAG------TACTTATCCATCTTTAGTTTTATAAT---------------------ATCTATATATAAACACAATAGGAGCCATTGAG-GTTTAAGAAAGGTATTGAT-GCTTGCAAGGTAGCA--TTTCAAGATTATTCTGGCAGGAGTGTAGAGAATGGATTGGAAGAGAAATAGGCTAGAGACAATGAAAGCAGAAGAGTTGACTTATTAGAACAGTTTCAGCCATGAAGTAAATAGACAACACAGACTAGGGCTGGGAG-CCCAGAATGGAA-GAGGAG----GTCACATTAAAGCATCTGCCATCTTTCC--AAGAGTCATCAGAGGAACAGCACCATCTCTGGACACTTGGTTATGACTAATGGATTGAGATTCCTGGCTTTTTCCAAGTATTTAATACAAAATAAATCTCCCATTTCCTTGGGTTCTCTTGAGTCTTTTTCCAGGGAAATTCTACCTCATCTTTTGAGACACAAAAGCTTAAGTCATAATTCCACAAAAATCCTTCTAACTAACACAAAGATGTCTTCCAAATTGACATTTCTGTAGCA--ATTTTGGTTTCTCGTGACTCACTGATTTCAGACAAGAGAGGG--------TAAACAGGACAGATCA------TGCATGAAACCTGTGTCATCCTTGTGGAATCATAGGTTTCTAAGAGACAACAAGAGGTCATCTGTTCGCCTCTCATGTCGTGGTCCAGTCATTTCTAAACCATCCTAGGGAATGATGACCTCAAATTTAACCATTTTACAAGTAATCTTATTGCTTAGTGACTTCCCTACAACATATACACATGGACCCACACTGCCAACAGAACACAATTCCAGGACTTAAGAGCTTTCACTCTGAAATTGAAACTGAGGAAAAAAAAGGTTTCCTTAATAGAAATTCTTA---CTTAGAATTTTAGAGCAGGTGGGCCCTTCTAGATTGTTCTAAC------CTAGTGTTTATCAGAAATAATCTAA-----Tcataagtatcatgtgggatgtttattcaaaatacacattcccagcacactttcaggatgattttgattccatgggttag-gaattggtgctagaattcttattGGGCAATTTTGGAAATGAGTGT-ATTCTAACCATTAAGGATCCCAATCAAATTGCACAGCTGGAAGAACTCAGAGCTCCTAAGACTCAGAACTCTACTACAATGCTCCTTTAACTTTGTGCTTCTCTTGATGAAATGGAAAACAACTAGCTTTCCCTCTCTGAGTACAT a score=22157 s mm7.chr15_random 3383784 957 + 7075849 AGGAAGCAACATTATATAAAGTGAAAAACCTGGATATCATTTGCACATCTTCTACGTATTTGCTGTTGCTCCTACATTGACCTTGGTACTCACAGTAAATGTcatttattgagagctaacaaggagcacagccctacacttaagactattatagacatcatctcattaaatccCAGTGTTTCAATTATCTCACTCTGGCTGACCGCCACTACTCATTTATTTTACCATCATCATTTTACTAAATCCTAACACCCTTAGCTACAGACTGC-TGTGATATCCACCACCATTTA----TTAGAATCTATACTACTATCCACTGCTTGGACAAGGCACACAGTGGGCCAGATCGAATGTCTCCAAACAGCTTAAGTATAATGCTTGGATTGTGTAGTATACCAAAGATC-ACTTCACTTTTGCCTCTATGATTAAGCCAGGGAAATCAGACATTACTCCTGAAATGGGATCATATCAGTAATC--AAGAAAGAACTTACAAATCTGAGTATCATCACTCCACAGTGCCTGAATCCAGTAGTAATAGCTTTAAGTAGCAAAATCAAACTGCTCTTTGTGGGGTGTTAGAAGCTCTGGGTCAAATTTTCCTCTCCAACCAGGAGATATATATC----------------CTTGAATGATACAGAGAAGCATTTTGCTAT-AAGCTCTTACATCATGAAAAAGAAACAGAATTTGTTTACTACTAAGGGGAGATAGTAAAGGAAACCAACCTTGCCTATGCATCCAGAATAAATACATTTCTCTAAGACCTAAAACACTACAGATGGAACAGGGAATAAAACAAAATTTAAGACCAGAAGAATGTCACTTTGTGTGTGGCTGACACTCTATTATTTCCAAAGAATTTGTAAGTAAACTCTATTGACTAAGCCACATTTTAAAAATAGGGAGTGTCATAATAGACTGTCTCAAAAATA-AAGTCTAGCAAGGCCTGGGAATACAAAGAAAA s bosTau2.chr14 24724927 898 - 50711261 AGAAAATGATGTTCTATAAAGCCAAAAGCTAGGAAATCCTTGATCCATCCTTGA----TTTGCTATTGCTTCTACACTGACCTTAGAACTCACAGGAAATGCCCTTTA---AGAACTTGCTAGGAACACAGCCCTGCGCTTAAGCTCATAACAGACATCATCTCATTAAATCTCAACAACCTAATTCATTAACTCTCCCTAATC---------CACTTGTTATA------TCATTTCACTAGGTCCTCACAGCCCTAGCAGCTGACTTCCTCTGACATCCACCAT--TTTAAAAATTGAGACCTGTCTTATAACCTACTACATGGACTGGG-------TGTGTCA-------------CAACTACCCCAAGTCCTCTACTT-----------CCTACCACTGATCTATCTCGATTACACCTTTGGATTTTAGCTCAAGATCCCAAACACCACTCCTGAAATAGGATGACAGTAAGAGCCCAAAGTCATACTTTGAAAAACAAAAT----TCACTAGCCAGC-----AATCCAAGACTAACAGTTTTGTATGGAAACTTCCATCTGTTTTTTGTGGCAC----------CTGGATCAGATTTTTCCCTCCTACCAGGAGA-ATATGCCACTCAAAAAACTCTGCCTTGGATGATGACATGATGTATTCTGCCATTAAGCACTCAAGGCAAGGAAAGCATCCAGGATTTG---ATTACTAAGAGGAGATGGCAAGAGAAGC-AGCTTTGCTAAAGCCTCCAGAATAAAT----TTCCGTTTAAACTCAAACTATGAAGTTGAAACTGGGTATTAAA-AAAACCTAAAGCCTGCAAACTCACACTTGG-GTATAAGTTGTACTACATCTTTTCTTGATTATTTGAAAATAGCTTCTGTTGACTAAGCCACATTTAGAGAATAAAGAATTTCATAATAAAGTTTCTAGAAAACATAAACTTGATGGAATCTGAGAATAAATATAAGA a score=6210 s mm7.chr15_random 3386066 345 + 7075849 AAATTCTTTATTACATCAAACCACCTAACCTAATTACACTCCTCACAATTGTTCCCCTTCCAAGTATCCCTGATCCAGTTAGATGCACCACTAAGTGCCTTTTCTTTCATCATGTCAGACACTAACACCCAGGATTAGCTTAGATT------------------------------------------------TTTTTTTCTTAAGGCTTCCTATATTCGACTCTCTTCACTCCCATGGTCACCGCCAAGCGG----ACTGTAAGTTAGGCTCCAGCTTCAGG-------AGTTAGTATAATTTTCTGACTGATCTGACT----TCAGATTTACCCCCTTCAATCTTTTATGTACATAACTATAGGATCAACCATTTTAAAACACTTCAGTAATTATCATAGATTTG s bosTau2.chr14 24728714 399 - 50711261 AAATTCTCTATTATAt-accctaccctacccgaccctactctTCAAACTTGTTCTCTTTCCTAGCATCTC-AATTCTGCCATGGGCACCATCAACCACC----CTTTAAGCCTGCCACACCTAAAAACCTGAAGTTGTCTTTGACTCTGTCTTTCCTTTGTCCTTCTCAGGTAGGTTAATTTCCCTTGAGCTGGTTTTCTTTTCCAGGTTTCCTGGATTCA--TCCTCTCCTTTCCATTTCTACTACCA-GCATTGCCACTGTCACTCAGAATTCAGACCCAAAGAAGCCTAAGTTGTCCAGCTTCCTGAATGATCTGCCTAGTTCCCTCTTCACTGACTTCAATCCTTCTTTCACAAAACTATCAGATCAATCTCTGCCAAACACCCCAGTAATTAACAGTAATTTG a score=12939 s mm7.chr15_random 3387723 747 + 7075849 AATCATCTGGAGTAGTTTGCAAA-------TATCTGAGTCC-----TTAA---GATATGAAGTAAATTGATCTGAAATATAAACTTGAGCAAAGGATT-----------TTTTTAAAAAAATACCCCTTATG------------CAGCTAAGATTGATAACACTATATCTCAATGTATTGCTCtaatatatttttataatattatCTGTCACTTTGGAGAGTGGCTATGCCACATTGATTAAAACAGGAGTCTACATTCTCAACTATTTCAGCTTTACATCTGAATATTGGCTAGCTCTTACACAGGGGTAAGCAATCACTTGATTCCTCTGTTTGCT------------------------CATTATTAAGTTACCAAGAG--------------------AAAGACTGTATAGGATCACCTATGACACAGAATATGTTTC-AACAAGCAT---------GGATATTTCTTGACCATTAATCTTCTTTTCAATGGC-----------------ACCTAGACATAACCCACTTTTTTATTTTTGTGGTTCTCAGAACA--CACTTATTATTTGATGAACAGAACACAAGCAAAATATAGCCAAGCCACAAAATTGCAACCCTTTGAGCCAGATATCACATTTATTTTATTTTTAGGTTAGTTTT----CCTCTTTTCTTCTCAAGTATATTCAACAA---------GAATGCATAATAAAATCA--CTTGATACTTTTTTAA---ATCAGGTGTACGATCCACCTGCCACAAGGGTAATGACTCAGCTGGCACACAG-----AGGGATCACTAGGCTATTCAGGTAATTAAAATGCACTGGGAGGCAAGAGA---TCAAACCAGGAAAAAGCAGGTACAATTGT s bosTau2.chr14 24729326 815 - 50711261 agtcacttgtaatactttaaaaactattgatgtctggatcccattcttaaagagacatggattaaattggtcctaggtgttaacctgagcaaaggattcttttttgctttttttcacaaagctcctccaatgactctaataaggcagccaagattgggaat--------------tactgCTGCA----------------------GTGAATTTAAAAAG-------------------AAGACAGcagtcaaa---ttcaagttttttggctccacttctaactagtgatcagctcttgagc-tatttaaacaatcacctagtatctatgtttatttgcaaactgggaagaataataatgcctaatagggcggttaagaacattgaatgatataatgcacgaaaagtgtctagtgtagcacatgactcagagtgtgtttccaaccaatactagctctaAGAGTGTTTCATGGCCATTCACCTTATCT-CAGAGACTACAAGCTACAGGGTTTGCCTGGGCATAACCAGCCCCTCT--TTTTGTGGTCCTCAAAATAAACACTTGTTATTTGATGGATAGGAAACAAGCAAG-TGTGGCCAAACCACATGATTGCAGCTCTTTGAGCCATAAATC----TTATTTTATTTTTAGTATAGCTTTGTCATATCTTTGCTTTCCAAGTATCTTTAACCAGTGTAATCtggatgcatgttagaatcattctggaggctttttaaaaataccaggcccagggcctaccc-ccctagagatgtaaactcaattgggacccaggcatcagtgttttctagttt-tccaggtaatagcaatacacagcaagggatgagaatcTAGAACCTGGACTAAGAGTCTACAGTTGT a score=7611 s mm7.chr15_random 3388663 489 + 7075849 TGTCATATGTGTATTATGCTTCTCAATCCTAATAAGGTCTCTCAGGAGGATGGCGAAT---ATTGAATAGAATCTCATTAGAGAAGTATAATTATGTGCTTTTTCAGAGTATGTACTCAAAATATATTTCTAAAGATTTGAAGCCAGTAACT--ACAAATTGGTTCTGTGACTACTTAGGAAGGC----------GACTCG--ATACAAATGCTCAGT--------------TATTCCTTAAACATCT------------TTTTTTG------------------------CTATGAGTATTA-AAGGA--------CAAGAACCACT--GGTCAGAA-------CAGCCAGCTGCACAATATCCTTCCATCTAGTGGTGGAAAAAGGCTCTTAGTAGCCTGAAGGAGACTCTTAGACTATTAAAACCACCATTAACACAATCATGTCAGTAGTTCCAGCATAAAGAATATCTATTTCTACTGCACAAGAATT----ATAAAAGTCAC--CATAACTTGCATTTGTGC-TCCTTCCTAATTTACAAAGTATTTCTCACCTAAGTTCTTACATGATGTTTTT s bosTau2.chr14 24730972 570 - 50711261 TGTCATGTAGTAACTATGATCTTCCACCTTAATTAGGTCCTTAAGGAGAGATGAGTATCTCATTAAGGAGAATCTCATTAGAGTGGAG--ACTCTGTGCTTCC-CAGAGCATATACTCAAAATACATATCAGCAAGCCCGAATCTGACTTCTGCACAGATTTGTTCTGTGGCTACTCAGGTAGGTAGTATTGGAAGATGTGTTAAATAAAGACTAAGTTGAAAGTTTGGGGCTAGTCCTTAAACAGCCATAGAAAGGAAATTCCTTGCTCACCCTAGGTGGTACACTGTCACTATGGGGACTGCAAGGAATGtgagtcagaaattacttgagtcagaaattactCAAGAAAGTTACTCAATCTCCTAACATCCGGTGGCAAAGAGAGCAGCTAAGTGACCTCAAGGTGACTCCCAGGC-ATGAA----GCAGTCAACAGCATCG-GTCAGGTGGCCTTGC--AGGGAATTTTCCTATATGCTACAAAGGGATCTACAGCAAAAATCACATCATAAGttaaatttttatatcttttataattttaaaattCTTTCCCATTTATGAGTTCATTTGATTTTTTT a score=27949 s mm7.chr15_random 3390489 832 + 7075849 AAAGTCAAATTTGACTTATCAAGGGCCATCATGTTAAAAAGTCAGGTACTTTCTTTATAATTACTACTGATAACTACAACATATAACTATCAAAacaattcaaagttcttgacatatgttaaccatctaatcctattaacttccctactacatgggtcatgattaaaaga-tgttctgtgttcatgaacgtagaaactgaggc---------------------------------cagtaccatgattcagacccaggatcctctaaatccagagcccatgcttgttccactgctctcttccatccctTCAAAGATTATAATTAAGTAAAATAATATGCTCTCCACAAAT--AAAGTTTCCCTGCACCAAGGCTATGAGACGACTTGCTGCAGATGA-CTTCCAAATACAAGGCGAGATCCTTTTTCTGGAAACCGCATTTGGCATGAAGGCACTAGAGTCCAGACAGCTTCCATGACGCAACTCAAGGTCTCC-TGGATGTTGTTCTTGATTCTGAAATAGCTCTGAACCTTCCTG-CCCTACCATCTGCCTTGTG----------------------------------------------------------------TTCTGCCTTAGGTAAGGTCAGTGTAGCCACAGG-CTTGCTAATGGGTGAGGGTTTGATTGCTCACATGGCTTGAAACAAGGTCCACTGTG----CCTTCTCCATCCCAGTGACTATTTCTACTTTCCCCACTCTCCTCAGAACTT-TTCTCAGTGCTGTAGACCT-----TGTGTTTGTTTTGCTTTTAGCATTGAAGAGAACTCTTAACAGT--TTGAAATTTTCTATAAAATTATCTCCTGGCACTTAGAGCATCCCTGAGTGTTGC-AAAGAAGAATGGTG----TTCTGAGAGGTGATGCTTGGATCTAGGTTTTGTGTATAAGTTG s bosTau2.chr14 24732390 936 - 50711261 AAAATGAAATCTCATTTGCCAAATGTCACTGTGTTAAAA-----GACACTTTCTTCATCATAGCTACTGATCGTTA-AATATCTGAACGGCAGCACAATATGA--CTCTCGacacacattaaccatctaaacctaacaactctcctgtgagatgggtaattattacaagaatgttctcagatcac-aacgaggagactgaggtgcccccagtcagagccccgcagtcggtggaccgcagagccatgattcagacccaggtctttctgactcc-gagctcatgctttttccgctgttctatgccatctcctcAAAGCCCATAATTAAGCAAAATAATATGCTCTTCACAAATGAAAAGATCTCAAGCACAAGAGTGATGAGACAACATTCGGTTGATGGGCATCCAAATGTGCGGCG-GATCCTTTTTCTGGAAACCGCATTTGGCTTCAGGGGCCTCAAGTCCAGACAGTTTTGGTGACGTAAGTCAAGGTCTCCGTGGCTGTTGGCCTTGAGTCTG-AATAGCTCTGAGCCCTCCTGTCCCGGGCGTCTCCCCTGAACACCCCTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCAACTCCCACCAAGCTCAGACCTGCCGTAGGACTTGCGAGTGGCTGAGGAGCCAA--GCTCGTGGGGTTGGAGACAAGTTACATTGTGATCTCCTTCCTCATGCCAGTAACTATTTCCAATGCTCTCACTCTCTCCAGAGCTTATTCTCAGCTCTGTAGGGCTTCGTGTTTGTTTGTTTTGCTTTCAGCTCTAAAAAGGACTCTTACCAGCAGTTGAAGACTTTAACAAAATTAT---TTGTCACTTAGAGCAGTCCAGAGGGTGACTGAAAAGGAATGACGGACACTCTGCAAGGTGATGCTAGAGACCGGATTTTAAGTGTAAACTG a score=11202 s mm7.chr15_random 3392130 590 + 7075849 TTGTACTGTCCTTTGTGTAAAGGAA-ACAGTGACTTCTTGGG--AGACAGAAAACACAAGATGTGACTGGTCCTTTGACCCATGGAGTAGCTGAACAGGTTTGTTCAAGGCAGGATA--------GAACATGAAATCAGCATCCCTGAGAGGGAGGTTCTGCCATAGAAGGAAATGAGCCC-AGAATAGCAGTCTCATCGCTGACTCTAAACTCAGAGAAGTCTAGATAAGTTCAAGGGCGCTT---GACTTGTG-AGGAAGAAAGTCTCCTGAC--AGAAAGTC------CTACAGAGAGGTTAAGAGCCCTTCAAAAGGGACCCCAGAG-----ACACATTTGCGGTTATTATGTCTGAAAGTACCCATGCTAAACAGCAGTTGTACTT-CTGAG---TCAATTCCTTCTTATTATTCCCGAGCTGCCGCCTGCCATGTCATG-------TTTCA------CTCAGCTCTGCTGCAGTGAAAG------GGAGTTTGCTCATGCTG-------------ATACAGAAAAGCAGTAT--ATAGTAGTTAGCATTCACTGAACATTTTCTATGTGCCACAAA------GTTAA------------ATACCTTGTTTTATTGTTGCAACAGCTTTCTAATTATAGGACACTAAAGTTTCTCATTTTACAGGTAGGA s bosTau2.chr14 24734898 631 - 50711261 TTGGGTTATCCACCGCACAAAGAAAGAAAGTGAATCCTGGAGCAAGACCGGGAAGGGAAAGAGACATTGGTCCT------CAT--------------------TTCAAGGTAAGGTGATACTCCTGAGTAGGAAA-AAGCTTCCCTTCTAAGGCGGTT------GAAAAGAAAATGAACCTGAGAATACAAAATTGACCTCTGAGCCTGAACTCAAAGGAGTCTAGAAAAGTTCAAGGACACTCTTCGGAATGTGCAGGGAGGATATCTTGTGACCCAGAAAGACGGTCACCAGTAGGAATGCAAGGAGACTCTTGGAAGGGACCCCAGAAGAAGAATGCACTTGGTTGTATTATCTCTGA--GCCTTTGTATTAAATAGCAGTTGTACTTTCCCAGATTTTAATCCCCTTCAGTTATCCCTGAGA---CATCAGCCATGTCATGGAAACCTTATCAACTGGTCTCAGCTGTGCCGTAGTGAAATAAAATTGAAGCTTGTCCAAACTGGGATCATAACAATACAGAGAGAAGTGGTGAGaataatggtgagcatttattgagaattttctatgtgccaggaatgaagtgttaggagcttaaggggataccttattttctc------aaaatcttgagattatagaactctaattattctcattttacagggaaga a score=21880 s mm7.chr15_random 3392769 867 + 7075849 GGCACAGTTGCTAAGGAGCTG-------TATGAGGA-------TTACACAGCCATGAGGTTCTATTGCTGACTGATGGGGAAGTCTGGGCTGCAGCCACAGTATCACCAAGGATGAAGGGAAAC----------------------------------------------------------CAAACAC-TGTTCAAAGTAATGAATGGCATAAATCCATGAA-CTAGATCCCAAACAATGTGGCT---TTCTAGTTCTCCAAGCTGGTGTTGCCCAAGGAATATTTAAACTGTCATTATATGGGAGCAGTTATATGGAAGGGGACAAAGAAAAGGAGAAAAATACAAAGACTTCACAAACTGTCTCATAATCGAATCTCAAACTTGAAAATTCCCGATCAGAGACA--ATTCAGCTTAGGCCAAAGCAAATCCTGCACTGGTAGCGTGCTGTGTTTAGAGCCCTCTGACTTTTTCTGCCGTTCTATTATCTATTGTGCTGTGACTAATGGGTTTTCTGGTGGTGCTCAATGCTTGGAAGGTCAAGGAAAAAAAATGGATGATGGTTTTAGAAATTCCCTTAAAGGCAACTAAT----ATGTCTATCCAAGGGGCATTA-AAATGTGCTTTTGCATTCAAAACCACTCTCCAAGGAGCTGTATGTA-CTCAGCCAAGGAGACG---TCTCTCCCAGTGAAGCTTGTCCACTTCAAAAATTTCTGAAGCCAGCTTCACAGTTCATAAACAACCCCGGGATTGGAACTTTCCTAAAGAAGGCGAAAAAA---GAAGAAAGGCTCCCCACCACTTGGAAAAGGA-AATCCAATTCAGCAGCAAGAGCTGCAGCATCTGCCACCTCCTTAAAACGTCAGGATCTCAAGCTCTGCCTAC-CCCTGACAAATCAGAATCTCGACT-------------------GTTGTGTGCATCTTAAAGTTAAAAAGCATAGTTTAGAATTG s bosTau2.chr14 24735683 966 - 50711261 GCCACAGCCAGCATGGAGTGGGTGGTGTCATGGGGAACTGAGATGGAGCAGCCATTGGGGTCTATTGCTGAATGATGGAGGGGCAGGCAATG-ACCCACATAAACACTGGAAATGAGAGAAGACAAGGCCTGGGGCTTCTCTGAGAACCAGTAGAAAGATCAGGGGGCCTTAAAATAAAGATCAAGTACCTGTTCATAATAATGAATAACATCAAGGGAGGAAACTGCAGCCTAACCTATGTGACTGTCTTTTATGCCTATAAGACAGTGAGGACTGAGGGACATCCAGGTTGTCATTACATGACA------ATGAGTAAGTGAACAAAGAAAAAGAGGAGACTATTAAGCAATGATGAACTGGCCCATAATCAAATTTCAAACTTGAAAATTTCTAAGCAAAGACTCTATTCTATATAGGTCTAAACAAATTTCACACTGAGAGCATGCTGTTTTCAGAGCTCTCTGACTTTATCTGCTGTTCTATTATCAACTCCACTGTTACTAATGGATTTTCTAGCTGAACTCAATATTTGGTGGTGTGAGG--AAGAAACTGGTGGCAGCATCAGAAATTCCCTTTAAGGTAAATAACAACAAGGTCTACCCTAGAGGCCTCATAGTTATGACACTGCCTTCCAGACCAGTC-CCATGGGGCCATAGGTGTCTCAGCCAAGGAGTCTTACTCTCTCACGGTGAAGCTTCTCCATTTCCACCATCCCTGTAGAAAGTTCCACTGTTCACAGATGAATCCACCATTAGACTGTCTACAAATCAGGCAACACAACTGAATGTTAAGAGTGCtgccactcaaactgtgagaatgcagatcatcagcaaaa---gaagcatctggaagcttattagaaatgcagactgtcaggccccacccaagacatgatgaatcagaatctccattttaacaagatcccaggtaatttgtgtgactggcaaaattaagaagcaGAACTTAAGATTG a score=3988 s mm7.chr15_random 3394005 148 + 7075849 ATATTACATTAATTCAGGTATGGGTTTCCTTCTCTTAATCAATTAATGAATCCATTAAGTATTAACTTA-GCATAGTTTCCTG-CTCTGCCAAGT-TTGTTGGTGAAAATTAATAGAGAAAAT---------------------AAATAAAAGACTCAGGATACAATCCCTG s bosTau2.chr14 24737663 166 - 50711261 ATGTTAGATTAACTCAAGTAAGAGTTGGTGCCTCCCAATCAAGTAATGAATATACTAACTATTCACTTCTTCATGTGTCCCTGACTCTGCTAAGCACTGTTGGTGA-----AATAAACAAAATCCCCCAAAGCAAGAACAACAACAACAAAAGGC-CAAGATAAGATTCCTG a score=37750 s mm7.chr15_random 3396687 1875 + 7075849 CTGAGGGGATTTCTAACAGTGGACCTGTGCACTGTACAGAAGGAAGT-TCTTGTGGTGGGTTGTCAAGATGGTACACTGTTACTCCTAACTTTGCCATGTAATTACTAATCTGTCATGGACAAAGGTTAAGGGAAACCATGAAGaacaa-atttattaagtatctattatgtgtctggagctTTCCATATGCAATTTACTGGCATCCCACACACAGCTTCTCATACTCACACTGCCACTTTGGTAGAGAAGGGTTTTAAAACATGAAGGTTTAAATGACTCTTACAGCCTGTCCTTTCCCCTGTATGTACAGCTGGCTTACTGTGC-------TTAAGTGGTACCAATTTTAGCTCCTGCATTTTAAAACAAATGCCTTGTGTTAGATTATGTCTTAGAAACTCATATTTCTGAAATCAGTTGGTTTATCTTTACAGTAGGGACTATGAGCCTAAAGGAAGTTACTTT----GAACCTTGTATATTACCTTGTGCGTTGCTAGACACTGTTCAATGATTTTATGCTGAATGTAAGAACTGAATTTAACCACCAAAGCAGCCTTGGGAG--AAGAAGACAGTATAATATTTTGTAGATAAATATTTGTTCAGA-GTCTCTGAATAAACCCCATATGTTGCTGATTCCTCATTTTTAAAATTCCATGATTGGCTCTTCAGTTATCAAAATTTCCTATCCAATGTTCA--TCTCAACTCTCCCCTACCTACCAAGCCACTGTCTTTGTCCACCAATGAACTAATAGCTATGAAAAGCAGTCTTGGATTAATCCAGTTGGCTAAAGTATGGAATGAGGCC-ACCTAAACCTTTGATGGATGTTTAAAGAGGGAAGAATAGAATGGATATGGGAGACAGCATTAATGTTCAATATAATCTTGATGTGAGGTTTAAAGAAATAACATTTGGAGAATGACTCTTCTCTAAAAGAACCAACCTTCAATAGACACCATCAGTGTCTTAATAATACAATGATTAC-ACCCATCTTTAAACTACACACTGCCTCTAGCTTTTCAGATTCTTCATTGATTTTTCATATCCAACCTTTGCTTTGCTGTTACATATCATTAAATCTGAATGCCCACAGCCTCATCTTCATGAAAGCTCTTCTTCTGCATCAGATAATGGTGGAAGATTGCTGAACTGAACTGAAGT-ATTCATTATACTTCACCCTGAAAGGACCTTGTAAAGAGG--CGGGTCACTGTCCATCACTGTCTTGGCAAGCAGACCTACCTTCTTGATGTTT---ACCATGTCTTCTTTCTAGTGCACACCTGTTATTTTCTTGGCAAAACCACGTGGACTCATCATCAAGAAACCACCATAGCAAAATCAAACTGATTACACCATTGTATACACGTCATTACACCCT---AGATTCAACAGAGGTGGAT----------------------GCAAAACACATGAA-----------------------ACCAT------------------------CTAGATTATTATAGATGT--------ATTACAAACTAAAAA-----GTGA---------------CTTTTTGTCCTCTAAAAGCTGTAATTTA-------------------TTTCTAACATATGACCCAAAGACAAGATGAGTCATTTGGTAAATATTTTGTTGACTGAAGCCAACAACCAA-GGATTTACTCTCAGTTTCTGTTT-TTCTTCCCTAATATGACT--GAAACTATGTC-TCAATATAAAAAGGACCTTAATTTTAACACAAGAAAATCTGAATCATAACCTGGAATATAACACTGTCCCCAGTGCTTTGCTAATATTTCTGGGGGAATCCTGCCAATTCATTTGTTTTTATA-GACTATGAc---tactggccatgtctgttc-aagggaggtgactgtgtcttatgtgtctgtctgtcaccaa-------tacagtgactaaaacatggcactaacgcataatgcat-tgcttattcaatgagtg----aaCATGGTCTTGAAGTGACTGCTGAGCCTTCACTGATTT s bosTau2.chr23 13683842 1870 + 41602928 CTCATGGTATTTCTAACAAAGAACTGCTGTACTATGTGGGAGGGACTCTCTTGGGA------GTCCAGGT-----AAAGTTATTTCTAATTCTGTCTTAGCATGACTAAT-TACTATCAATAAAGGG-AAGAACGAAAATGAAACGGAATATTTATTTGGTATCTATTTTGTGTCTGGTGCTTCGTACCTGCCCTTTCC--GCAAATTACA-ACAGTTTCTTGTGTCATTCCTGCAACTTTTCCAGTGCTGGAAATTAAAGAAAGAGAGTTTAAATGATTCTTACAACTTGTATTTTTCCCCTCATGTTTTACTG--CTTCTGTCCCTTCGCcttaagctctctgggctccagtttctgtacctgaaaatgaacagattgttcaagataatgtcctaggcctttttagttctaaaatCAGTGAGTTTTTCTTGACAGTGAAGTTTCTCAATCTTGAGGCAACTTCCTTTGTTGAAGCCTGTCTATTATC-----CAGTGCTACGTACCATTCAGTAGTAGCTAACTGAATGAAAGGACTGAATTTAAGCACCTAGATGGCTTTGGGTGTTAAGAAGG-------------------------TTTGCTCGGACTTCTCTGAGCAAACCTTGCCTATTCCTGTTTCTTCACTATTG----CCCGTGTTTTGTTCTCCACTTATCCAAATT--CTATTCCATCTTCAAAGCACAGCTCATCCATGC-----AGGCT----TCTCAAGCTGCCAATGAACCACTCAATAGGGTAAAAAGGATAGGATTATTCCAGTTGATCTAGGGATGGACTCAGTCCTACATAAACCTTGGAATGCTACATAATGAAGGAAGAACAGAATGGAGA----------------------------------------ATTTAAAGAAAAAATGTTCCAAAATTG-CTCTTCCCTAGAAA----------CAAAGGACCACATTACTGCCTTAGAAATAAAATGACTGGGATCTAATTTTAAAATCTACACCACCTCTAGTTTTTATGATT--TCATAGACTCTTCACAACTGACCTCTGCTCTACTGTCACATACCAT-AAATCTGTTTGTACACATC-----------------------TCAGCCTTGAATAGTGGTAGAAGATTACAGGAGAAGACCAACTTTGTTTATTACATCTCTGCCT--AAGGACATCCTGAAGAGGTCCAGGTCACTATGTGT----------GCAAGAAGAACCACC-----AGTGTATGGAAAGATTTATTCTTTTTAATGCATCTTTGTT-----CTTAGTAAGACAAGATGGAATCAGCATTGTGTAGCCACAGCCACAAAATTAAAATGCTTACTCCCATATATATACACTATTACGATCTCTGACATTCAGCACAGATGATTAAGGAATGTgtattcttgcctgggaaatcccatggacagaggagcctggtggacttcaggccatggggtcgcaaagagtcagacatgactgagcaactATAAACATTCTGGATCACTGTGACCTAAGAATCATAGTGATATACTGCTTCTGCTCCTTTTGTCCTCTGAAGGTTATCATTTACCAGttgctcacctttgtatccctgacacctggtacaatgataaaatgagtcattcaataaatattt-gttgaccaaatCCAACAATCAATGGACTCAACTCTATTTTTTCTCTATTTTTCCCTAATATGACTCTGAAAATGTGTCATCATTATAATAAACACATTAATTT-AAGGCTGGAAAATCTGAGTCATAAAATGGAAGAAACTTCTGTCCTCTGTGCTTTGCTAATGTTTCTGTAGTTATATTTGCAGATCATttgtttgtacatgcctctctccttcactggacatgtgttttctaagggaggtgac--tgtcttactcatctgtgtatcatcagctttcattatagtgtccaacaca------taatacactttgtagatgtttattaaatgagtgagtAAATATATTTCTGAAATAATAGCTGTGCCTACCTTGACTT a score=48509 s mm7.chr15_random 3404498 1359 + 7075849 tgattggaagcaagttgctagatAATGCTACAAACAG-GATCAAAGATTCGTAGAATGGGTGAATACCA--TAGGTCAAGAATCATGAAAAAGATGAATTATGATCCATCCATCATAC-AGTCAATTTTAAATTGGCCTTAAAGGAAGACAGCATGGCTAAACTGCAAGCATCATTTTCTAGTCTTTTG------TCTTGGAAATTTAACAGGAAATTTCTAACATAAAGTTAGCTTTGatttaaagaaaaatatt-taaaaatat-ttaaGGCTTTATAACTTCATAGATAACAA---TAGAACAAGAAGGAAATTGACATTATCCATAACTAGCTGAGTTGCATAGCTGTATAAAATT--GAGATTATATTAAATGTACATAGACCAATCTAAATAGCTGATCTTGACACACTTAATTCAACATATATGAATC-ATTATACTGTTCTTCATATTGTAGGGGATTAATACCGCTTTGAAAATGAACCATATATAATTAGATTTAAATGTGTAGATTTCAATTATCCTTGCTAGTTCTGTTGATGCTCAAACTCTTACCAAAGGCTATTCTGCGACTGCTTACAAATGTAATGAAGAAT---TTATTTCTCAAAGTAGAAATGAAATTGACTATAAGAAGTCAGAATCCATGCTGTTATTACTCACAACTAACAGAATTGTGCGTATAAGTGGCTAAGAGCTGCCTTCTTTCTAATCTGAGAGGATGTTCCAGGCCAACAAATGGAAAATAAAGTCATATTCAGGTGCAGTCAAGGAGTTAGGATACTGGGAATAAAACTGTGCCTCACTGGTTGCTTGACATGGATGACTGAGGTCATTTAAAGCAATGCTTTAAAATCCACAGATAACACAATCAAAGGGTGGGTTAGAAAGTTTATGCCTTTTGACCAGGACCACGATCCACATCCGTTACAGAGAACTGCAATTGGATATTATTCAAAGGGTGATTTTCTTTGCCAGTATagaagaagaaggaaaaaaaaaagaagaaaagaaagaaATAATTGAACACTGCATTATTCATTATTCCAGAATAAATGAAAATAGAAGGGGCTTAGAGTAGAAAATGACTTTTCAGCAAAATTTAGGTTTCTATATAATCAGGCTGTCAACTACAAAGCATGAGCCCAATGCAACACAATTCGATGCCACAAATGAGTAAATATTTAATTCCTAAGTTGCTTTTTCCACAGCACAACTAAGACAACTGGCTTTTTCTTG------TTATGTCTGTCATTCTCTGC------------------------AATATTAACCAAGCCACTGAGGGAATATAATTATGCCATCCTATCTGCAAGTTTTGATATGTTTCAATATATAGCATATGGCACTGTGTTGTAATTCTGGTTT---GTTTTATTAATGCCT s bosTau2.scaffold14543 1318 1380 + 10424 tagttagaaacaagtcactggacaagcccacagtcaatgggtagggactccaagaggatgtgaatgagaaggagataaggatttctgggagacat--cttagagcccacctgccacaCTAGTCAGTTTTAAAACT-CCTGGGGACAAAAGAGACTAGGTAAACAG-AAACATTCCCATTTGGCTCTTGGATATACTCTTAGACTCTTAACAGGAGATTTCCCTCACAAAATTAGCTTTTACTTAGACAAATATATTCTGAGAATGTAGTGTGGCTCTAAAACTTTATGGGTAACAAAAAGAAGACAAGAAGGAAATCAAAGTTATCTATGACTAGTTAAATGGTTTAACTGCATAAAATCAGGAGATCCTATTTAATGTTGGCAGACCAATCTGAATAATGGATATCGACATACTTAATCCACCATATATGCATTGAGCATACTGTTTTGAATATAGTAAGGG-CTAATATCTATTTGGAAA--AAATAAAAGAGAATAGATTTAAATGTGTAGATTTCAATTATCCTTGCTGAGACTGTTCACACTTTAACTTTTACCAAGAGCCATTCTGCCTCTGCTTACAAATGTAATGAAAAATAATTTGTTCCTTAAAGTAGAAATAAAATTGACTATAAAAAATCAAACTCTGTGCTATTATTTCTCACTCCTAACAGAGCTGTGCTTATAAACTTTAAAGGGCTGTCTTCTTTCTAATCTGAGGGGAAGTTGAAGCCCACCAAATGGAAAATAAAGCTATATTCAACAGAAGCCAAGGAGTTAAGAAACTAGGTATGAAATTGTGCTTTCCTCATTACCTGCAATGCATGGTTGGGATCATTCAAAATAATGCCTGGAAATCTTCTACTAAAACAATCAGAAGGTAGGTT-GGGAGTTTACGCTTTTTGACCAGGTCCACAACCCACATCTGCAACAGTGAATTTTAATTAGGTATTATTCCAGAGAAGAGTTCCTATGCTGGTATTAAATCAGA----------------------AAAAAAGCAGTTCCACATTGCATTATTCATCATTCTGATATAAATGAAAATGGAATTGACTTAGAGTAAGAAACTACTTTACGGAAACGAGAGGGCTTCTACATAACCAGACTATCAGCCACAAGGTTCAGGCCAATTATTATAAAAATATATGTGATAAATGAATAACAATTTTATTTCTAAAGTACTATTTCCATAGTACTAATAAGGCAATGG--TTTTCCTTGAACCATCTATGACTCCAATGCATTGCTTTTATTTTTGGTAAGAATGGGATAATATTAAAGAAGGCATTAAGAGTATAAATATATATAATCTTACCTA-AAGTCTTGACTAGTTCCATTATACATTATATGTCTTTGTGACCTGCTTCCTGCTTTAAGTTTCTATTGTGCCT a score=12142 s mm7.chr15_random 3408683 605 + 7075849 ATGAAGACACACAGTCATTTGTAGCTTTAAGAATCTAAGTGAAAAAAGGCAAAGACAGCCAT----TTATTGAGGGTCTG-TGTGAACAAATGGTTACTTGTTCACA--TATTTTCTCTCAGTGAACAATCAGTCTCAAAAATAAA---TGCAATCTCAATCTAACAAAGGAGAATAGTATAGTTAAGAGATCATAG----------AACGGAAAAAAACGTACATCTTATATATCTTGAGTAGGAAAATAACAGGGTGCATTTCACCCACAAAGCCATTTgagcttcacaacactcattccaatgtgaaagcgaaagaaacttcagttcagag-cgttaaaagaactgcaaggttttatacatcaggtgaaaagttgagttgagttggaacccatgtgtctgtgattt-ttaCATTTTCCCCAA-----TAACAG--------CATAAAATCCCTTTAAATGTGACTTCTTTTAAAAGTCTTACAGGATTCTCA-GGTTTCCTTTCAGGGGCAGAGGGAAAGTTT--TATTTTTAAAACTGTTGTCTTCCT-----GAGTAAGGCATCTAAAAAAAAGTCTCAAGAATTAAATTTGTCTGTAATGAAATA----AAATTAGTAAGATTAAGTATTTGGGACACTTACCTTG s bosTau2.scaffold14543 2994 634 + 10424 ATGAAGATTGAAAATCATGTATATTTTTAAGTATGCAAGAGAAATA---CCAGGAGAATTTTATCCttattgagtaactactatgtcccaaacattctttttttaaacttatattctctcaatgaatgatcagtcttgcaagtaaactttattatctcagtttgataaatgaggaaagggaaactgtgagaCCATTGGGAAAAAACCAAGGGAAGAAAACTAACATTTGTGATCCAGTGACAACCAACATGA-GGTATActttatatttattaattaatttaaacttcata-tactcttccccttgttacagttatagaaacttatgttgggaaatgttaaataatttgcacaatataatacacccagtaa----------TTAATTAGATCTCATGTGGATCTAATTTCTTGTATTTTCCCCAAGTGTATCACAGTATTTAGGCATAAAATTC-TTTATATGTAGCTTCTAGCAGAGGTACTGAAGAATTAAGATGGCTCCCTGCCACCTTAAGAGGGGAAGATTGCTATTTATAAAACTGTTGTGTTCCCCAGGAGAGAAAGGCATCTTGGAACA--TTTCCAGAATTAAATTTATCCataattaaacaaattaaattattaaaagtaaatattaGAAGTATCTTCCTTG a score=10882 s mm7.chr15_random 3409375 705 + 7075849 TAATGAAATAGAAAGAGGAACAAATGACTGTAAGAACATACCAAACAACAAGGTACCAATTGAGGTTTAATACTTCATTCTCCCCAGCATCAGG-----------------CCCTACTCTGATGGTCATACGATATCCCCAGACTGTCTCAAGTTGTACACTTGGGATGATGGACATCTCTCCATGTTTTTGTTTAGTAGAGCAGTAGGCAAATTTGTCCCATCACTGCTCAAGAAGTTTATGTTTC--TCTCTGGTCACTGA--------CATGCCCTCTGACT-CATGGTGCTCCTTTGTATCTTTCCCACACTTTCCTTTCATTCCTCCATTACAA---CACATGAGTTGAATGT-------GGACT----GTGGAATTTCCCTTGGCTCTCTTGAAGACCTACAGAGGCTgtgcagtggctaggat-----gctccagatgaagc-aactgactttgaggcagacta-----gcagtcactataataa---gcctgtggtcttcacaaaatgacttgatattttaaaagtctcagcttcttaagtgcaaaatggggtcaatgggactccttttctc--tgaattgttataggaat--------ATTAATTAGCAGAAATAGAAATCAC----AGCTTGTTTA--GCTCCTGACATGTTGTCTTTTACATA-TAAAATCTGAGGAAGAAAATGTCTTTCCATTTGACTGTTCAGCTTATATCTACTTATAAATCAAAATTCAGAAGCAGAAATCCTTATTCTCTTAATAAGATAG s bosTau2.scaffold14543 4419 759 + 10424 TGACTAAATACAAAGC--AATTAATTAATCAACAAACATATGCAGCAACAGGGTACCAAACCAGACTCA-TACTTAGTTCTAGCAAACCTCAGAATACTCTAGACTATGGCCTTCACACTGAATGTTATGTGATGCCACCAGGCTGCTTTGAGTTGTAGATTTCGCCTGGCAGGTCCTCAGCCAGGATTCAGAT-AATTTAGTGTTACCCACTTCTGTTCCACAACCATTCTAGATGTTCAGATCTTGATCTCCAATAGCTGAACAGAATACAGCCCCTCTGTTTATTTGGTTCTTTATCATGTATTTCTCCCACTTTTCCTTCATCCCTCTGTTCCAAACACATTTTATTTTGATGTTTCAAAAATACTTGATGTAGGCTTTCCTTCTGCTCACTAGAATTTTCAGAGACAATGTGCagtagttaagagcatgagtttcagatcagactgagtggcttcaaggcagacaatcaaggcagacaatttattaattagcatgtgacctttaaaaagctacttagtacgtccaa-gtttcaggttcttatgagtaaa-tagggataagagaagtatctacctcagggagtcatcatggaaattatttaagataatTTAGATGAACCAAATGTGACCATGAATATGACCATGGTTCCTGACACACTATTTTTTTAATAATAGAATGAGACTGAGAAAATGTCTTTTCATTTGGCTTTTCAATTTA--------TAGGAATTAAAACC---AAGAGAAATTTCTTTTACTCTT--TAAGAAAG a score=19386 s mm7.chr15_random 3410117 798 + 7075849 CTGTGTCACATGACC-ACCTCAGATGGTTGGTGAGAGTGAGGAGATCAGGAAAGGATCATGATAACATCATCTAACCCATTGAGAGAGGGG---GGGGGGGAGAAAAGACTAAGATGAAAGAAGAATTGTGTGTG----GCTGTGAATCTCTTAAATGACGAGACCAACAATGGTTAATGACTGTAGGATAACATTATTGACTGGAGGAAAAAATTCAAAAAACTTTCAAATGCTTGTTTTCTTCAATTTTTAAATCAAAATGTAGAGA-GCAAAATGGGCAGGGC--AACTGAAGTCCTATCCTGATTTCATGAAATA-GGAGCAGCAAAGAAATAATTAGTGCTGGAGAAGCTGTAGTGCTGCATCCCAACAATGCTAGTGAAATGGACATAAGCAGATATCTAATTAGGTCGATCAGGGTTTTCCACAATACGTAATTAGTCCAACCCTGAACTGCTTTGTAAGATTCTTCCCACTGTCTCACATCCATTACTCAAATGCTTACTTCAAACCTCCTACTTTTTCTACAGATAAACAGGGTTGAAAAACATTACTC----------------------ATTCCTTTTGGAAACATGGAAATGACAGGATAGAACTTATTCAAATAAAGGAGT--ATTTTCCTAAGCCTGTTTGTCTCTTTTATATTTGACTTAGACCTCATGAATTCTCTTGTTTCAGGAACAAATTCGTAAGAGTAATTCAGAAAATTCAGAAAGACATTAAATGCCAGTGCTTCCTATTTCAGTTTTTTTGCAAAAGttttttttaaagttaaattt-taata--tttaaaatGTTTTTCAAA-CAATCCATTT s bosTau2.scaffold14543 5745 803 + 10424 CTGGGTCATATGCCCTCCCCCAGGGGGCTGGGATGGGTGAGGGGGTAAAAAAAAGGGAGTACTGCC-TTATCTGAACCACATGGATTGAGATTAGGCAGGGTGATGCTACCAGAATGAA-------CTTTATAAGCTACACTGTGCATCCCT-AAAGGACCAAACCAACCATGGATGACCAACACAGGATGATACTTCTAACCA----AGAGAAGTGAAAGCTCCTCCAAATGCTTGCTTTCTCC------TAAATTAAAATACAGAGATACAAAAGAGAAACAGCCAAATTCAAAGCCTATTCTAATTTAATTTAATTTGGAACCACAAAGGAACTTTT-TTGCTCAAAAGGCCACAAAGTTGAGTCTAAGCACTGCAAGTGAAATGGACATCAGTAGATATCCAAGTAGGTTAATCAGGGATTT----AATAGCCAGTTTGGCTAAGA--GAATGTCTTTGTAAAAATTCTTTCTATCCCTCTTGTAAATTACTTAAATGCTTATTTTAAACTTTCCACTTTGCCTACAGAGACACAGTCTTGAAAAGCATAGCTCCCCAAATTTAAACTGTTCAGTTACCCCTAGGGGAGGTATGCAA--TATAAGACAAAAGTTATGCAAATAAAATGATAAATTTTCCTA--TCTGTCTGTC-CTGTTATAATTAATTAAGATCTTAAGTATTTTCTTGTCTCAGGAAAGAATAAGCAAGAATAAC----AAAATTTAGAAAGAAATAAGTTGCCAATACTTCCTAATGTAGCTTTGTTTCAGAAACTTTTGTAAAAGTCCAATTGATGACAAGCTTCAAATATTACTTAAATCAGGCCATTT a score=30358 s mm7.chr15_random 3411624 951 + 7075849 TTTTGTCTCTCTCTCTACGTTTTTCTT-----------------CTTTATGGCTATCTATAGACCAAA---------AATGGGAGATAAAGGTGAAACTTAGATAATATAACTGAATTCTCCAAATTAAATGTCATATATAAAAGCATGTTTA-GAAATGTTCACATGAGAAGAAAGGACAAGGAAATACAGGAGGCAATCATGGAGGTCACGGAAAGTTTCCTTTCTCTT---CTTTTGTTTTCAAATGCAACAGA---TTTTAAGCTAATGATTAAAAATGCATTATGAGAAGACATTGGCAAGATCATTAGAAAAGAACATGAAATATGACCATCTCAAGTAATAAATTAAGAACATAATTAAATAACTGACTACTCACTTCCTCAACCTTTAAGCCAAATGCTATAATCTGGGATTTAAAATTAATAAGGAAACCATAGAAACAGATACTGAGGAAAACTTCCAAAGAAACCTTGCTTCATTTCACTGTAATCTTAAAAAGTAGATATTTGAGTGGGCAGTGAATCAGAGAAGTACTCTGAAACATGACTTTAATTTATTACCAACCAGAATTAAATAAGG-TCTGAAGGACTACATTACAAGAAATTGAAAGCTGGAACCAATTAAGGATGCTCCTAGCTCAAGGTTA--CCCAATTCCCCTAGAAGACCTATAAACCATCAGACAACATTGTGTTCCACAATGTGTCAAAT--------------TGAAATGAAAATATAACTGGATATTGTGGAATACCTTTGGAAAAAAATTTTTATGAAGACACACCTCAATTG------CAGGCCAAATCCTCTATTAAGCAAAAATCTATTTGTATCTTTCAGCAACTGCTTGATTCAAACTTACAGA---------------------TTCCTTCCTGAGTCCCAACAAAAAGCTATCACCAAGAGTGTAA---CTCAAGAAAGGCTTTTCTCCCAGGATA-AAAGGTGGCGTGCTTCCTTAATGTTTGATCTTACTCCATTCTTAGAACATTATTTACA s bosTau2.scaffold14543 6588 997 + 10424 TTTATTCTCTTCCCCCACATTTCTCTTTGTAAGAAATTTCCTCTCTCCATGGTCATCTATCCCTCAAGTTATCAAACAATGATGAATGAACATGATATTCAGACAATGTAACTTTGTTTCTTAAATAGAATGTCACATGAACCAGCAAATTTTTAAAATATTCACACATACAAAAG-----AGCAAATATGGAAGGTAATTATGG-GGTCACAGAAAATCTGTTTTCTTTCAACTTTTTGTTTTTAAATGAAACATACATTTTTAGGTTATGAATTAAAC-----TTGTGTGAAAATCTTGGGAAGATCATTA-AAAAGGACATGAAATATGAAAATCTCCAGTAATAAT----GAACACAATTAAATAAATGGTCTTTCAATTTCTCAATTCCTAAGTTAAGCTCTGTGTACCAGGATTTAAAATGAATAAGAAAACCATAGAAACTGACACTTAGTCACACATGCAAAGAAATATCATCTAATTCTATTGT--TCTTAAAATACAAATATTCAAGTGGGCAGTGCATCAGGTAAGTACACTGAAACATAGATTT-ATTTATGGCC-ACCAGAACTAAATAAAATTTTGGAGGAATAGAAGACAAGAAATGAAAACCTGGATTCAATCAGAGATGTTCCCAGTTCTGGGTTAGGCCTATTTTCTCCGGAAGTTCTACAAACTTACAGCTAACATTA-ATTCTAAAATGTATCAAATGAAACAATGTATCACTAAAAGAAAATATCACTGGATATTGTAGACTACCTTTAGAAAAATG-TTTTACAAAGACATACCTTAACCATTTAACTTGGCCAAGTCCATTATTAAACAAAAATGTATCTG--TCTCTCAACAAAAG-TTGACTAACACTGGTAGCATTATACTCTTATTGACCTCTTTCTTTCTAGTTTCAAAAGAAAATACTATCATCATGAGTTTACTTTCTTGAAAAAGGTTTTATCATTAGATTGTAATGACGACCGGTTTCC----------ATCTTATTCCTTTCTTAAAGTTTCATTTACA a score=5722 s mm7.chr15_random 3468665 245 + 7075849 TTCTCAGAACACTTGTTTTTCCACTGGTTTAATATCTAACTGACTC-TCCCAATGGTTTGATGAGGGAGTTCTGTTCTCTGGCA----TATTGTTCATCCTTAT-TCAGGGCCCGACTTAGGAACCT---ACCATGTTAATTCCAGCACCCATGTGCCATCTCTGAGAAAATATTTCCTCGGTTGTGCAGCTGTAATGCTCTCAGTGCAGAGAACCTCAGACTCTCTGGACTTGACCGGTTCATTGATGTCTTC s bosTau2.chr20 23957853 241 + 42952723 TCCTTAGTATATTTGCTTCTCCACTGGCTCTGTATCAGCTTGACTCCTCCCAAGTGTATATTGAAGGAGTTGTGCTAACTGGCAAATTTGTTGTTCATCGTTATGTCAGGGC------TAGGAAAGTGGGACCCTGTGAGTTCAAGCCTTCAGGTACTCTTTCTCTGCAAGATTCCCCTCA-------AGGCTTAATACTCTCAATtcagagaatcatagaatattagaatgaggagagatcttcaaggtcatc a score=8788 s mm7.chr15_random 3468962 591 + 7075849 cctgtgagaaatgcagattcccaagagccaccaagaaccactgagtcagaacttcagctt---taacaagatccTAAGAGATGAGAAGCTCACATGAAAGCC---GAGAATCTGCTACACAGTAACCTCTGATCAGATGCAGCTATGCTACCAGC-------------------TTGTCCCGTGCTC--------------TTAAGC---------CAGA-------------ATTGAGATCCCCAACTTTGGTTGAACATTGAAATCACAAACATTGATG-----TTAaaaacaaaataaaacaaaaccaaaaccaaaacaaaaAAAGGCCTGATGCTGAGACCTTGCCCCTAAATGATTAGAT---------TGACATCTCTGCTGTGTGAAGTCCCCCAA----AGTCT--CTAGTGGC----TTTGAACTCCTGATCTAGAGCCATCTATTTGCATCTTATGCTATCTCCTTCTTTCCTCACTTTGATTTCCTCTGAAAAATGCAAATATGCCTCCAGAAAGGCAAAACTGTTATCTCTCATTTACACTTTGCTTGAAAATAG--------------TATTTTTTAAAAATCAGCATAAATAATGCATCACAAACTCTCTGATATCAATGCGGTCGTAGGCATGGCGATTCACACAGGAGCATTCTGAAGTGGAAAGGCCAAGAGT s bosTau2.chr20 23958140 600 + 42952723 cttgctaggaatgaagaatctcgggagccactcagacctactgaatcagaatcttcattagaacaacaagattgcaagagatgaagtgtccatgttagtgtctgagaagGGCTGCTCCAGA-CAGCCCCTTATCCAGTGGAGAAATTGTATCTGCAGCATTTTCCAAATGGTGGTCCCCTCGGGCTCAGACGTCTTCACCTTCAGGCTTTGGGATACAGATCAGTGATTCTAGATCAAgattcctaactctgactgcatattaaaatcac-----ctggtgagtttttaaaaat------------------------------------tccaatgttgaggtcttactttggactaataaaatctgaacctctggcatttgtgttttatgaagtttccccacaatagcctaacatgtaaccaagtatggaccactgATCAAGAGCTATCCATTTGCAACTTAGGCCATTTACTTCATTCCT-ACTTTGATTTTCTGT-AAAAATGCAAGTATTCCC-------------------------------TAATTTCCCTGGAAATAGGGGTATGttttttttttttttttttaattatCCTAACTAACTGATGGCAAACTCTTTAGTA---------------ACATGACAATTCACACAGCATTATTCTGGGATGGAGGAATCAGCAGT a score=10967 s mm7.chr15_random 3469619 769 + 7075849 GACCTGACCTTCATCTACTAAACTGCTTTGGGT---AAGGAACTCGGCGAGGGTCAGAACCTGAAGCTCTTCTTTGTCTGCCCTGCTGTGGTTCTTGCTTCTTCTGCTTCCTCATGCATTGGCTGGTGTGAGAGTAACCGAGTCTGGTGAGGTACGCCGTAGCCGCTGAGACTGTAGGATCTAATCAGCAGAGCTTGAGGCTTCTCTCCCCGTGAGTTGCCT-----GTCCCA---------TGCTTATGCCACAATTCTGCCAGCTACAAAAGCTGTTGCAGTCTCTACTCTTCCATTCGGAACTTCTCCAGACACCAGAGTAAGAAGC-CTTTGGTCTGTGACATGGTTGCTTAACAAA-----------------------------------------------------------TTAGTAGTTTTCAAACT----AATTTTATTTAGACACTTCAGCCTTAGA----TCGTTGTTTG-GGGAGTGTGAGTTATGCTAACAGTACCTTTAAGCAGACTGAACCCATTTTC-AGTCAAAGGCTTCGGGGAAGGATTAGGGAGAATGT-TATTTTTAAAATGAAAATAAAATCACTCCCTATAATTTTATTAACGTATGATTGATTAAGATATAACACAAAATAATCCCTTGATAACACATAAATTT----GCACAAACAATTTAGGTTCCAGTGAATATTTTCTGACTAT-----CAAACATTAGAAAATGTTCAGACTGCGATGTCTCCTTTATATATATTCATTTCTCAAACCAAATGATTTTTGCAAAGTAAGTCAATTTAATTTAGATGCTGGAGGATAAAATCTCATCACATTTTCCTCTCCCTGTTCCTGGTAGCT s bosTau2.chr20 23958787 792 + 42952723 gaccagatcttggtcaGTTAAACTGCCTTGGGCAGGAAGGGGCTGGGTCAAGCAGAGAACAGGAAATTCT--TTGGCCAGCCCACTTCAGGTTTCTGGTCTGTCTTCTTGCTTCTGCATTCACGGTCCCTGGGGTGAGGAAGGT--GTAAAGGAGGCAAGAACCTCTATAACTGTTGGGCCCCCGCAGCTGAATATGGGGTCCACAGTCTAGTCCGTGGTCTAATAGGTCTAAGGCAAATTTTGCTAATGTCATCATCTTGTTGGCCTCAGAAGCACTT---GGTTGTTTTTCTCCACTCAATAATCCT-------CTTGAGTCATAAGCACTTTTGTTTGGGACATGACTATTGAGAAAACTGAAACCTGCTTCTATTACTTTTTTGCAAGAGTTGTGGGAGAATGATTTTGTTGACATTTATTAGCTTTAAAACTATCCAGTTTTATTTTGATAGTACTACATTAGACTAGTTGTTGCTTGAAAGTGTGTAAATCATGTTAAC--TAATTCTGAACATATTAAATTCATGATCAAGTCAAAAATTT-----GAGGACTTGGGAGAGAGTATTATTTTAAAAGGAAATTCAAGTTATCACCCATAGTCattttaatttactattaataaaaatataacagaaaataaactcttaataataaataaatttaGAAGTTCTAATATCCTAGAGTCCAATAAGTATCATTCACATATTAAAATAAAATTCAGAAAACGTATAGCTTACAAACTTTCCTTTATAC-----------------------------------------------------ATGTTTGAGGATGAAATGCCATCACATCTCCTTCCTTCCATCCCtgcttgct a score=5434 s mm7.chr15_random 3470388 216 + 7075849 GAACTTTTAAGCTTGTATAAACATACTGA---GTTCTGCTAATAATGAATTTGACACATAAGATAGGCTCATAGATGCCTTGGAGATATAAAAACTTGGTTTTCGGGTCTTTAAATATCCCAGTAGGTGATCTTTATAGATAAGAGTCTATTAGAATTCACGCTTTACCGCAAATGAGCATTATAGGAAGAAGGAATTTTCTTTGGAGTTTCTGGTGAG s bosTau2.chr20 23959799 208 + 42952723 TAGCCTTCAAATCTGTATATACATATACACATGTTGT-TTAATCGTGAATGTGACACATTAAAT----TTATAGACATGTGAGGGATTTAAAATTTAGATTCCTAGTTCTTTAAACATCCCAATAAG-GAGTCTTAGAGATAA-----CATTAAAGTTTACTTTGTAGACTAAGCAAGTATTATAGGAAGAGAAGATTGTGTCTTGGGTGCCTGAAAAG a score=11636 s mm7.chr15_random 3471995 386 + 7075849 GTTTGGTTTCTTAGGAAAATTTGAGCA--GAAAATGGGGAATTTTTTAA-AAGCATGCTTTTTGGTAAGCATGATCATTTTCCCCCATTAATATAATATTTGAATTCCA----------CTTGGATACCAGTTTTAATAGACATAGTCTACTTTTTTAAAGTAGCTTATATTTTCAGTTCAATA----TTTGTATTTATATTTTAACACATACAAGCTGAAATGGCTAACTTGAATATTCTTGACAAGTTTCCCTTTTCAAACTAAAATACTTGGGAAA-TCACCATGTTGTTGCTGTTGTTTTTGTTTGTTTGCTTGTTTTGTTTTAAGCATGAAAAGAATCTCAGTCATTTCCCAAATGAATCTTTTATATAGATTTAAATTTCTTAAAGAAGGCTACTTCT s bosTau2.chr20 23960309 379 + 42952723 GTTTGGCTTCCCAAGAAAATGTGAGCGAGGAAGATGGAGAACATTTTAAGAAGGATATTTTTTC-TAATTATAACTCTTTTCTTCTACTACTACAACATTTGTATTTAAGAATTTTAAAATAAAATCTCAATTTTGGTACATGTATTCTACTTTTTTCAC-TAACTTACATTTTCATTTCAATAACACTTTATTTTTATATTTGAATATATATGAACTGAAGTTAACACTTTAGTTTATCTACTCTACTTTC--------AATTAAAACATTTGGGAAAATCTCCCTGTAGTGACttttataaatattt--------------ttttaaatGTGAAAA-AATCCCAGTCATGCTCCAAATGGATCTTTTACATATGTTCAGATTTCTTAAAGAAGGGCACACCT a score=28619 s mm7.chr15_random 3472639 1190 + 7075849 AGGACGTATATGGCAATATCC--------AACATCATCCACATCTGCTCGCTTCTCCAATTCTAATCTGTTTCCT-GATTTCAGTATCTCTTTTTGGCCCCACATTTCTTCCATATG------TGTTCTCTGTGGGGAATGCATAAATACATCTACATGCACAGTTCCACGAGTAACAATATGAGGTTCTCATATATGGAGCATATATACATACATATATACAAACTTCCTTACACCCTGTTAAGTACAGTTCTTCTATTGCCA--GTCTGCCTTTCACACCAACAAACTACACTAGTCCTGAATTGTATGATTTTGTATAGGTGTAT---AATGAAGTTCATTGTTACAAAAGAGCTTGAGGCCAGAGAATTATTAAGGCCATCCCTCTTATT-CACCAAATAAACAGTTTCAAGGACACCTACCATACATAAGACACCATCTCATGTTTTAAA----CGTCTTCGATGATAATTTATGTGTGATCTTGCACTCAGCAAACATTTGACTCT--TTCTGCAGTTCAGACTCAAGATTCTTATTAGCATCTCCTGGGATACATTGTTGCAGTCTAGACGCAATGAAGGAGGATGTGCCTGGGACAACCCTGCCCTAACAGGGATACAAGAATGTGCAAATCGGGAAGGATATTGTG-TCCCACCAGTTTAGCCCAGGAAAACTATGTCAGAGAAGCAATGTGACTCACCCAGAGGCCTATAATAAGTAACAAACAACACAGAAGGACAGAGAACATGAAAATCAGGCATACTGGATAAATTAAGACAGACATAACTAAAGCTGTTGGAAAATATGAATGGGCCT-AGCGTTCTCAGCAACAGCTGGGACTAGATAGTGTCTCCTGCCAGTTAGTTGTAGGTGTATTCTGGGTACACA--TACCCATTTGAATGGGCCAGTCATTATGCCTACCCTGGAGAAGCCTTACCTATTGTCTCATTACTCTTTTGAAAG--GTCTTTCATTGTCCTAAGATTCAATCTTTGATTC---ATCCTTATCTCAGGTCCATGTAGGAAACATGTGGTCTGGTTG----TTTGTCT-TGGCCTCGGATCTTGTTTGCCATC--------------CCAGTGTTTCTGGGGTTTCAGGTCTGGGGCAGATTTATCTTGTGACAGTGACAG-------------GACAAAATGAAGTAAACATTTGGTACATGCCCACTGTGTGGGTTGCAGAGTATACCCGTTTGTCCC-----ATGAGCACATCTTTGAAAATA s bosTau2.chr20 23961172 1171 + 42952723 AGAATATACATGAGAATGTTCTTGATCTCAGCATCTTCCACTTCTGTTCCTTTCTC---TCCCAATGTGTTTCCTTGACTTCTGGGTTTCTTCTTTGTCTTAATTTCCTTACATATAGCTCTCTACTTTTTGAGAAGGGCCCAGGTATACACCTGCATG-------------------------GGTGAGAATACATGGGG---------------------ACACTTTCTTACATCTT-CAAATTAAACTCACTATGTGGCTACTGTCTGCTTTTCATGCTGGTGGAAGTGAACAG-CTTGAATTATGTGCTGTTGT-------TATTTCACCTCAACCCATGATTATCATGGAGTCTGGGACCAAAGCACAATTAAAGCCATCCCTCTCCTTTCACCACATAAATACTTTGAGGACTGCCTTCTTCCTGCAAGTCAACATCTGACATTCTTCATCTGCTTCTTGCATCTT--TTCCCCTATCATCTGG-ACTCAGCAACCACTTTGGTCTAATCCTTCAGCTCAGACACCAGGT-------AGCATTTCCCAGGATAAGCGGTTGGGATCTGGACGTAATTGAGGAGGATGTGCCTGAGGCCACGTTGCCCAAACATGGGTGCAACAGTGTTCAAGCTGGGAAAGATTCTGTGCTCCTTCCAGTTCATCCCAGGAAACTGCTGCCAGGGAGGCAATGTGACTCATCCAGGGACATATAACAAGTAATAAACAAAGCAGAA-AACAGGCAACATGGAAAGCACGCATACTGGATTAATTAAG--AGGC---ACTAAAGCAGAAGGAAAATATGAATGGGGCTCAATGTTCCCAGGAACAGAGAGGACTAATTGGAG--TGCTACCAG-TGGT--TAAGTGTATCCTGTGTGTATCTTTATTCATCTTGATGGCCTAGCCATTATTCCTTCCCTAGAGAATCTCTATCTTGTATATCATTATCTTTTTTGGAGCTGTCTTTCATTGTCCCAAAGTACAAACCTTGTATTGGAAACCTTATTTCCAATTTACAT------------TTCAGATCAAAGCTTTATCTCTGGCCTCGAGTCTTATTTGCCATCCTAGCAATAATCCACTAGTGGTTCTGGAATTT-AACTCTGGAGAGGACTTAGCCTGTCTCTGTGATAAACATGAGTGATGCAATGAAAGAAAGCCAACATTTAATGAATGCCAAGGGTATGGTATGTACAGTGCCCTGGGTTATCCCATCTGATGGTCACAGCCTTTGAAGTA a score=25834 s mm7.chr15_random 3474436 1283 + 7075849 ggctggctgAACTTTCCAATCTTTTTCAATCTACATCCTGGTTCATATTGCCTCCTTTTAGGAGCTACACAAATAAAAATAAAATCAACCTCAGCTTGCAAAA-TGTACTTTTGATTATCTTCACAGG--TTTTTCTCTTGGCATCAGAAAAATCCATATTTATTATCACCATTGCCAAATAACTCAAAAATGAAGCCTACGTTCTCTTGCTTCCTAGGCTTTACCTCCAACACTGGAGGTGTGTTCTTCCCACCTTCCTTCTCTGCCTCCCAGCCTCCCATTTCTGCTGTGTGGGTAGACTGGATATAGGCTGACTGGAAATTGTGATTTGACTTCCTCCACCCTTTGCAGAGACAGGGGATGGCTTTGGTCCTGTGATTACTATGTGATGTGTGTGC------CTACATTTCATTTTCTTTTTA-------------------------CTTTATTTCACTTTTGGCAAGTCAATGGCTTTCCAAACCTC---AGGGCTTTCTGAAAATAGACCTCAAGTTGGACTTCCT-TTGCTTTTAACCAGTGACAGCTGTCTGATCTGACAGGGTTGGGGGGCCCTCTTTTGTGGAAGCTGAGACTGCAATGTCTAGGTCAAAGCCGagacatcatttt-tctgatgtcttcactttatagccgagaaaaataaggtcttgagaggtcagtggaatcagtaaaccccttctgacaattagtgacagggctgggaagagagtacagatctcctgaccttgagtccCTAGAGACATCGGAGCTGCTGTATC-TTTCACAATTGAGACCCAAATTTTGCAA-TTGCAAGCCGGCTCTCTCCATGTGGATGCCTTTTAGGAAGGGACACTCGGTTGAATGTGACAACTTTGGACCACCCCA----CCCCATGTTTTGCTGTGCCGTGTGTCGCTAGCAGCTATGGGAGGCCAGATGTCCTTGAAGCATCCCTCAATATCTACAAACCGGTCATATGGCAGGA-------------------TCCCTGGGCTGTCGGGAAGATGGCAGCTTGT-CTCTGTTTCTTGCATGTCTAAGTTGGCAGCTCTGGACAGAATGACACAGTTTATGAGGTCTGCTCTTCCGCTCCCCCCCCCCCCACACCCTTGGGAGTGCACATCTTATGCGCTTCATTTCCTCCTTCTCCTGAGATGCTCAGGTCTGAATCTTTCTCTTGGTATTTCAATCAGTTTCGTTCCTCCTATCCTACCCAGTCCTTTACCTGGATTGCCCTCTAGCCTGTCAAAGGGCATTCATATTTTCTCTTAGACCCAAATAAAGATATTCCATAGATTAAACCATGAG----CATTAATAAGGAA s bosTau2.chr20 23962894 1266 + 42952723 ATCAGACTGTATCTTCAAACC---TCCAGTC----CCCTCCTCCTCACTTCCTCCTTTAAGAAAC-ACCCAAATACAAATATAATCAAACTCAGATGGAAAAACTGGCATTCTGCTTTTTTCCACAGGTTTTTTTTTTTTGGCATCAG-AAAATCTGCTTTTATTTGCACTGTCATTAAATGACCCCGAAACTGAGCCAGGCTTCTTCTGCTTCCTACGC-CCACCTCT----CCAGAGGAGTCTCCCCTTCCCCTCCCTT------TTCCCAACTCCCTATTCCCTCTGTCTGGGTAGACTGGAGAT-GATTGCTTGGAAACTCTGGATCTGCACCCT-AAGCCTTCTCAAA----------GGCTTTTGTCCTG------CTGTGTG-TGTGTGTATTAAATGTTGCATTTTGTCTTGTCTTTctccctccctcccttcctccttccctcTTTCTTTC---TTTCACAAGAGACCCTGCTTTCCAACTTCACAAAGTTTTTCTGAGAATAAACTTTTTACAAGAGTTCTTGTTGTTTTTAAGTACTGACATCTGTCTATTCTGGAAAAGTAAAGAGG--TTTTTCTGTGGACTCTGAAACAGTGAGCCCCAGGACTAGGAC-AAACGtcgtctcatccaataccctcatttgatagaggagaaaaacaaggtctaaagaggtcagctgaatcactaaagtcccattgactgttccagacagggctagagccagagggcaggtctcctgacctctagtccACCGAGATTTTCTTGAGATCATGTCATTTCACAAACAAGCCCTGCATTTTGAAAGTTGCACGCTGACTCTTG--AAATAGCTGCCCGTTAG----------TCTGCTGA--GCAGTTGCCTGCGGCCACTTCAGGGTTCCGGCATTTTGTTGTGTTGTGTGTGTGTGGTCGCT---GGTGACCACACAGCTCTGGAG---ACCCCAACGTCTTTAACACGTGTGTGTGTTGGGGGTGGTGGGGTGGGGGGGATTCCCTGCATTTCCAAGAAGATAGTAACTCCTGTTCTCTTTCTTGCA--TTAAATCTGGCAGCACCAGATAGAATCACATGACCCATTAGGTTTGCCTTTCATGTCCCACTCTCCTC-------------TGAACAGCCTGCCTGTCTCAGACTTCTCTCCTTCTAAGAAA--GATGGCTGGAGC---CTCTTCGTTTCTCAGTCCCTACCATTCCTCCTCTCCCACCAGATACTCCAAGTAGGCTGCCCTATCTTCTTTTAAAATGCATTCATACTTTCTTTTCAACCCAAATAAAGACATTCC-Tgggctaccccaggtggcgctagtaataaagaa a score=19127 s mm7.chr15_random 3478313 1300 + 7075849 TATGCAGGAGCTGCTCTCATTTGAGATAAGCACAAGCATATGTTTCTGTTTGTTTGTTTGTATGTTTTTAAATATTTGTGGAGTATCTGCAGAAAGCCACTCAAAACA--------CCTGGTGGCTTTCGAGAGAGGAAAGGTAAAAGGGCAGCTCGTT----ACTGTCCAATCTGCTTAATAAACATTATACATTTTAT-TTCACTT--------------AAGTCAATAAAACCCAGACACATTTTTTCTTTCTTTCTGAACATCCATCACCTTCATTTAGAGTATCACCAAACATCCCATAATTGATATGTCTCCCTTTCTTATCTTT-----------GCAACTATTC-ATGGGGCAGAAGTCAGTATCTTCATCCCATGATACTGAGCAAGGTAGGCAAGGCCATTCGCCTGCGGGTGATACCATTAATTGAGTTTAAATCACCAGAGAATTTAAACA----------CTTTTTAAAAAACAAAACAAAACATTCAAAGTAAATTTTGCCACTGTTAGTTCCCACCCCCTCTTCCTGCCCCTGAAAGCATGAAAAGGGTGAAAGTCAAGTGTCTCATTTGTCTTTAGCCTGATTTACAAGGGCTGTGAGCTGTTTGTCAAGCTGGAAGGAGTGGAA-CCTTGAGGAATGTGATTGTAATTGCAAAGGAAAGGGATGTGTTCCTTCTAAAGCTCATCTTATGTTTGTAACAGTTGAATTCCCAAAG--AAAGTTTTAGGTCTGTGGCCCCAGCACCCAGAGTTTGTAGGGGCC-TCAGAAATAAAACATGAC-------TTAAAGGTGGGGCCTTCAAGAAAGAAACAAGGAAGGACCTTTGGGAAAAGAAGACCTGTTTTCTCAGTCAGCTATGACTATCTG--GAACATGGT--------TGGTTAGGAAGAGACAGCTGTCAGCTCCTGTCTAGCA-GAGAGCCAGTATGCTAAAACCCATGTTTGCAAAATTAGCAA------------ACAGGTCTT---AAAAAGACA---------------------------------CAACACTGGGTGGCGGCGTATGGAGGGATGATGGAATTCCATGG------------------------------------TGCTGTTCATTAG---CTAATATAAAATTAAAAATAGAGCTAGACCCGGTGGCACAAACTGTCATTATTCCAGCTCTTGGGAAGGCTAAAGAAGGAAGATTTTAATTTCCAGAGCACAGTGGCCTAGGCAGTGACTTCCAGTAGTGAAGCTCTGCCTAGAAAAGTAAAACAAAATAAATTGCAAACCACTACCACCCTCCCATGAAAATTTTGTTATGGCTGCCATCCATTCATTTGGGGAATACATG-TCCAAGCAGAGCCTGAGGTGAAAC---------------TCCCCAGTCTCCAGTTGGAGTTGCTCTCCAACGTATCCCTTGGAG------CTCTGGAACT s bosTau2.chr20 23965867 1377 + 42952723 TATGTACAAGATGCGTCTGTTTGTGTTAAGTATATGTGTGTATATATATATATTTGCTTGTATGTTCATAAA----------ATAACTGTAGAAGGACACACAAAAAAGTCTTAATATTTATTGCTTATGACACAAGAAAGGGTAAAAGGAAACTTATTTTTCACCATTTACTCCACTTGACGCACATTTCAAATTTTATATGTACATGCAAACTATTCAAAAAATTAATTAAATCCAAA---GCTGCTTCTTTGCTGCTGTCTATTTCTCACTCTCATTCATGGACTTCCTAAACATCCTATAATTGGTAACTTTGCCTTTACTTTCTTCTAACAGCCTCCGAATCCACTCCATGGAGGAAAGATCATACTCTTC-TCTCATGATATTGAGTAAAGCAGGCA-GGTCACTCTTCTGCTGGTGACCTTATTAATTGAGTTTAGACCTCAAGTGAATTTGCACAGGTTTTTTTTTTTTTTAA---------TGAAACATTCAAAGCTT-CTTTGCCCTCTTTAGCTCCCCTCCTC----------CCAGAAGGCAGGAAGAGAGTCAAAGACAAGTATTCCATTTGTCTTTAATCAGATTTACAAGTGCTGTAAACTGGTTGTTGGACTAGAAGAAGAGAAAACCTTAAGGGATGTAATT----TGACAAGTGAAGGGAAGAAGTTGGGTCTAACATGTGCCCTATATTTGTAACAAGCAGATCTCAAGAAGTAAGGTCTTATCTCCATGGCTTGAGAATCTGGAGCTATTAGAGGCCCTCAAAACTAAAATATAACAATATAACCAAAGATAATCCCAGCAAAGAAGAAACAAAG--GGGACTCTGATAGAACCAAGTCAGCTTCCTGA-TCACCCACAGCCAGCTGCAGAGGATGGAAAGGCCAAGGGTGAGGAAGTG-----TATAGGTGCTTGTTGAGGATGTCAGCAGGAGGGCTGAAACTCAGCCTTGCAAAATTCGCAATGGACAATGTGTATAGATTTTTGAAAAGAGACATTCAAacctactgtatatacagggaaccctactcaattctctgtggtgatttaagtgggaa----ggaaatccaaaaagagggcatatatgtttacatatagctaatttactttgctgtacagtagaaactaacacaacattgtaaa-gcaactgtactc--cagtaaaaac----attatttaa---------------aaaGAAAAAAGG----AACGTTCAGAAAAAAAGAGACTTGGA-------TTAGATGGTGCTGTTTTAT-TAGATAATAAAGAGAAAGCAAACCCTGGAACATGACAATGATTTCATCTAG------------------TCCCTTCATTTTGCCAAGATACACTACAAGTAGAGCCTAATATTAAACACATGGATCTCAGGATTTTTGGTCCTCTGCTGTGTCAGCTCGCACCTGTCTTCttcaaagtctggactctggaacc a score=21312 s mm7.chr15_random 3479700 1659 + 7075849 cagccttcccctgattcagtctccttggctgtgaaatggggataatgctaacaatg-taccttcttggtgtggttgctatgggaattaaa-GGCACCTTAGAGAGGGTCCTGTACCCAGGAGACATCATACCGATGTTAGTCTTA-CACTCATGGTTACTATTTACTGAAATTGGTGCACCAGAGAGCACTAGTTATGCTAGGCACCTGTATGGTAGAATATAGTATCAGGGGTGGGGCTCTAACCAATGACTGGCTCAGCCTCTGACCCAATGCCATGACAGGGAGACATTTTTAAGTGAGAAAGTGAAAAACAA---TGAGGGACGATTCTGCATTAGGGCA--------CTGGCTT---------CCTTCAGTACACGCCAAGACCTTCAGTGTCAAAAGTCAGTATTTATAGGAGCTGTCTGATCCAGAACGGGGGTGGCATGCCGTGCCAAGGCAA-----CTCAAAGTAGATTCCTGTGTGTCATGGGGGCAG--CAAGGATGACCTTTAGT----GGCCTCAGTGATCCTATGGGTCTAATGTAGTGTAACAGAGCATATCTCTGCAGAGTCACCTTGCCTGGTTTCCC--TACGTGTTT----TCACCTCATAAATGTAG--TGCCGTCTGGACG---TTCCTGCACTAGTTTGGTTTAAGA-----AACTCCAGTGGCCCTGGACTCAGACTTC-AGCTACTCAAGTTGTAGAGGACTTTGAATTTATTTATGGAACAATTACACACCTGAAAATACCAACGTGTAAGGAACTATATTC-CAACCTTGCTAACAG----GACTAGGTTCATGGGTGGGGGTGGGGGTAGGGGAAAGATCC---------------AGGGTAGAAATC-----------------ACAGGA------CAACA-------CTCAGCTCTCCTAATGGAAGATTAACAA---GGGGCCAGGAAGCT-------------GCTCTGCCAGGTGGGGCGTGGCGATCAC------CCTCAGACGTTTGCCAGTGACCACAGTTTCTATCTGCGGGGCACTTCCTAGGGCCTTTGATCTTTTCCAGGATTCTGGCGAGGGCT-CGTTTTCCTT---------------TTAGATTATTTATTGTATCTGTTTTCACGAAGGCTTGG------GGTCAGAAAGCCAGTTTGCT------CGGGAGCTCACACCCTTTGGGGCAGTACTGTAAACTCCAGCCAGCTGCAC---------AGATCTC---------TTGGGAAGGGAGGGGGTCTTTC-CTCAGCTAGGGAGCTAA-------ATGCTGGCTCCCGCATTG-----------CCCCTACT---CCCCAGTCCCGGCCTGGCCG-CAAGCGCTCCCTTTATAGA-GGACCTTCTCAGCCC-CAAAGAAGTTAGACTTTGC----------CACAA--------TAACCTGGACTTTTTTCTCTTTTTCGGGGGAGGGGGGGTGTCTAAAGTTGCCACCCACCACCAGAAGGGGACCTGGCCCCCAGGCACCAGTCCCTAATCTTCATTTGGCCTTTGCCTCTGAGTGGCCTAGCCTCAGCTCTCCATCTGTGCGCCTTAAATCCCATTTATCTTCTTAGCACCCAAGACTTGGCCAGCCCCGCCC--TCCTCCTCCCTGCTT--------GAAAATTACAG------------CCCCTCCCTTGCGCTTCTT---CCAAGAGTGCTCTACAGAGTAGAGAAACCTTTG-AGGTATTAGGAAAAGTGGTTTAAACTGGGAGCAAGCCACCTAGAGGGGTATGGGGGAAGAAAGGTCCAGCCAGCGAAACCGAAGCACCAAACCAAAAGTTAAGGGTTAGGATCCAG-CCGAGGACCCTGGGCCCGCAGTC s bosTau2.chr20 23967531 1737 + 42952723 taacttttacatgtttcagctttctcatctgtcaaatggggataatactaataacaatacctagctggtgtggctgacagtgggattaaacagtcttttaaagagggtctggtacatggtaggtgatatataaacactagccataatATTAATGGTTAatattacttccaatttttaaatcagggag------------------------------aata--------------------------------------------------------------------atttttaagtgggaaagagcagaaccaacatgggagataact-----TCAGGGTAACAGTTATTTGGTTCTGGGTGTCACCTTAGGT-----CCAACACCTTCTCAGCTGGTGGTAAG-----GTAGACGCTCTTT-ATC----ACAGGTGGAGC--------TCAAGGcaaagatgctgaggacagactcctgagtggaatggaggcagggcttagatgacctctaatcttaagattctgcta-cctttgagactA--GCAGCCTTGGGGGGCAGAT----GCAA--------TGCCTGGCTACCAGATATACATTTAGTATCACCTTCAAAGTGAAGGGCGCAGTCTGTACGAATTTCCCCCTCCAGCTCCGTGTAAAAGGACAAACTCTGCTGTCAC--ATCTAAGACTTCCAATGACTCAAGTCGGAGTGGGCTTTGAATTTCTTTATGGA-CAGTAGTACACTTGAGAACGCCAAAACAAAAGGGAACGTATTCTCAGCTTTGCTAATAAACCAGATCCGGCCCATTACAAACCCTCTAGCCAGGGAATAGATACTTCCCTCCTAAAAGAATAGTAGAAATCTTTGCGAGGAGGAGGCGAAGGGAGATAGTCAACATCGTTCCCTCCGGTTCCCTGAAGCCAGGTTAACAATGAAGGGCCTGGACGCCAGGAGCCTcccgggcgcggcacggtggggcggggccggcgcggAGTCCCCCAG------GTCAGCCACCCAGGCTTCC-TCTGCGGGGTACTTCCTAGGGCCTTTGATCTTCCCCCAAAAACTGGCGAAGCCTGCGTTTTCCTCCAGGTTTGTTCCCTCTTGGTTTATTTATTGTATCCGCCTTCTCTTCTCTTTGGCTAGAAGATCAGCACGCGGCTGTGCAACAGGACTGGAGTCCCGGCGTCTCCTGTCGCCACCTGGAAATCCAGCAACAGGCGCTTTTTCCTGAGTTCTCCGTAGCAAATACGGAGGAGAAAGGGTCTTTTTCGGAAACAGAGAGCCGATCTGGGGACCCTGGTCCCAGGATCAGTGGCCAGGACCCCCTGTTGGCCTCCAGGTCCAGCTTGGCTGGCGCGCTCCCCACTCCCAGCCGTGTTTTCCCGGTCTACCAGGGAGCTCGAGCTCGCTTCCTTACCCCTCAAGCCGGGCTTAACCTAAAGCTTCATCTCCTCCCCTGGAGGG--------TCTCCAGTTGCCTTCCTCTACCGGGAGGGCACTCCACTTCCCCGCGCCGGGCCCTAATCTCCACCCGGCGTTTCCAACAGAGTGACC-GGCTCCAGCTCTCCATAAGCGCGCCTTAAATCCCATTTATCTTCTTAGCGCCTGGGTCCCGGCCGGCCCCGCCCCCTCTTCCTCCTAGCCTCCCACTCTGCAAACCTTAGACCCTCGCCCCTCCCCTCTGCTACGCCCCTTACCCCGAGGGCGGTGGAGCGGCTAGAGCCACCTTTGGAGGTGTTGGCAAAAGTG-CCCAAGGAAGGTGGAAGCGACCCAGAGGGGCGCGGCCCGAGGAGAGTTTACTAGGGGAAGGCGGGGAGGCCCCGCAAGATTTCAGAATCAGAACCAAGGTAGAGGGTCCTGGGATCGCAATC a score=56400 s mm7.chr15_random 3481383 1511 + 7075849 GTCGAAGTCGGTCCCACCCCGGCCCCCAATCTAGGTCACCCGCGGGGAAGGGCTGAGCTGGGGG-----------------------CTGTCGGCGCCGGAGGTGGGCGCGGAGTGAATTGATTCAGACCCTGCCCCTCGTTCTTCCACTAGATTGTAATTCCATCTCCTG-CGGGTCGAGCCG----CCCTCCCTCCGGCGGCCAGTGCGTCCCTCCCC-TCGGCT--CTCAGC-GTCCACTC-----------------------CCCAGCCCCGAAAAGCCTTGCCGCTGCGAGCCCGCTCCGCTCAAGCACGCCAGCTTCCCAACTGCTGCCTTGCCTCCTCGGACTCCCGAGTGGCTCCTGGTTCAGCTCCCTGGGTCTCCCACCTTCTCATCC------------TCGCGTCACTGGCGTTCCCCGCGTCCCCCAGGAGACGCCCTTTCCCTGCGCGCCCGGGACTTGGGGAAACTTTGCAGACGCCGTTGGTGAGATGGATTTAATCTCAACCTTCTCGCTCCATTTCTTGCTCCTGGCCTGCAGCCTCCCACCCGGCGCTGTGTCACTCCGAACGGCTCTGCGAAAATCAGGTAAAGCACTCAGTGCGCCCGGAGCCGGGGTGCCCGGAGCACCCCGGTCCCGGCCTTTGGTGGGGTTCGCAGAGCAGGCAGC---CGCTCTCTGCTCACCAGCG------TGGGCTCAGCCTGCCTAGCCTCTGCGCAGAGCTCAGCCGAGGCACGAGCCTCGCCCTCCC----CCAGCCCAGGCAGTCCCAAGGATA-TTGTTTGTTAAAAGAAACGATTTGTTTTCCAGAGCTAG--GAGGTGGTGGGTTCTGTGTGGAACCACGGACTGCGAAAAGTTGGGGGTTGGGGGGGTGGGCGGGCAGCTATAGCTCTGTCTCGGTTACACAGGACTGAGAGA-GCGCAGAGGACTTTCAACAGCTCCTCCTGCTTCTTTGAACATCTTATTGGACTCATACTGCCTAGAGCCCAGCCATTTCCTGTTGAGTGTCTGAAGGTTTGCTGGGAGCCCCCT-TTCCTGGCTCTGGTCCTGTCTAAGCACTGGGTACGGACCTGCACTTTCTCTGTTGTTGGGATTCTCTTGCAGCCCCGGGCTGTTTGTGCAGAAAGCAGCCCACAGTGGGTTAACCTGAT-CTCT-TTTAGAACTCCTGTCTTAGCACTGCTGTCCAAACAAAGATATATATGCACTGTAGGCTAGCTAGTACAAAGGATCAGAGAGAAGGCAACACCACAAAAACTCACATTTCTTCT--------AGGTAAAAAG---TATGTTTTTATCAACATTGATTTGGCTGTGTCATGAGGGAAAGTGGAACAGTTTAAATAATAAAGTTCCTAGCGTTGCTTCTGGGTAACGATTTTTATTCTTTGTTGGCCCGGACCATATTTAGAATTGTGAAAAAAAAATCTGCTTTTTCTTAGCTTACTTTACAAGTGGG--GTTGTCTTATGGGATTAATTATGTCTTCTGAACAATGGAAAACAATCTAAT--TATTTTAATTCAGCCTGCAAAAC-TCACAGAAAGTGGAGTCTGCCCTCCCAAATG----TTTCTACAAGAAAGTGG s bosTau2.chr20 23969296 1555 + 42952723 GTTGAAGTCGGCCCCTCCTAGCGCGCCAATCTAGGTCACCAGCCGGCAAGGGCTGCGCAGGGGGTCGCTAGAGGGGTGATGGGCGGGCTGTCTGCCCCAGCGGTGGGCGAAGAGTCAGATGTCTCAGGGCCTGCCCCTCTCACTTCCACTCGATTGTAATTCCATCCCCGGGCGGGTCGAGCCTTTCTCCCTCCCTCCCGCGGCCAGCCAGTCCCTCCCCGTCGGCTTCCTCAGCCGCCCCCTCAcccccccaccccccgccgcccgccccgcTCCGAAAAGCCCTGCCGCCCGCAGCCGGCTTCACTCCAGCACGCCGACCTCCCGGCTGCAGTCCTGCCTGTTTGGACGCC--------TCCTGGTCCAGCTCCCTCAGTCCTTCGCCTGCTCACCCAGGTCAGGGGCTCCGCGGAGGCCGCGTCCCCCACGTCTCCCAGGAGACGCCCTTTCCGTGTGCGCCCGGGACTTGGTGAAACTTTGCAGGCGCCCGCGGTGAAATGGATTTAATCCGAGGAGTCCTGCTCCGGCTCCTGCTCCTGGCTTCCAGCCTCGGACCCGGCGCCGCCCCGCTCAGATCAGCGCTCAGAAAACAAGGTAATGCTGTCAGTGCTCCCGGGAGCATCGCGTCCGGAGCGCTCAGGTCCCCGTCCCCAGCAAGG-ACGCGAAGCTGGCGACGCACCTTCTCT-CTCACCCCTGATCCACCAAACTTAACTGGGTTCTTCTCTGCCCAGAGCCCAGAAGAGACGCGAACCTCGCCCTCCCCTTTCCATCCCAGGCGGTTCCAGGGATATTTGTTTGTTGAAAGAAG-GATCTCTTTTCCAGACACAGCAGAGGTGGAGGGCTCTGTATTTGACCACAGAGAGCCGAGAGTTG------------------GGGCAGCGATCACACTGTCTCAATTAGA-AGGATTGCCAACTGTGCAGGAAAAGTCAAACGGCTCCTCCTGTGTCTCTAAACAGCTTATTGAATTCATACTGTCCAGAGCCCAGCCATTTCCTGTTGAGTGTCTGAAGATTTGCCTGGTGTGCCCTGTGCCCATCTCCGGTCCTTCCCACGCACTGTGTCGGGATGTG----GCTTCAGATGTTAGGGGCTTCTTCCA--CTCGGGCTGTTTTCTCGGAAAGGAGCGCCCAGTGGGTTAATTTTATGCTATGTTTTGAGCTCCTGCCTT-----TGCGATTTAAACAAAGATATATAGCCTC-----ATGAGCTATTACAGAAAACTGGAGCGAACTTGA-AACACAGTAACTTGTATTTCCTCTAGTTACACAGGTAAAAAGTCTTGTGTTTTTGTCTACTTTGGTGTG---GTGAGATTATTCAAAGTAGAACATTCTAAGCAAGAAAGTTCTTAACAGTGTTTCT--CTAATAATTTTTATTCCTC-TTCGCTGAGGTTATATTTAGAATTCTG----AAAAATCTGTTTTTT-----CTTACTTTGTAAGGAGGGTGTTGTCTTATGGGATTAATTATATCTTATGAACAATGG-AAACAGTAGAACTGTATTTGAATGCAGTCTGCAGAACTTTGCGGAAAGTACAGTTTGTCTTCACAAGTAATTTTTTCAGAAAGAAAGAGA a score=44883 s mm7.chr15_random 3482953 1657 + 7075849 GCAAAGAAAATAATCTTGGCAGGTTCCCATCTGCATGTTCAAATATGTCTTACTGCTCCAGGATCAGTCTGGAGTTTGGGGCG-------GTTGC-CTTCGATCCTAGGAGATATC-TCAGTCTTCAGGCTCTGTCTGTGATCATCTGTGTCCCC----TTACCTGATTTAACACTGAGGACCGTTCTCAGCTTCCACAACACATTCAGATTCAGAACGAATCTGTCAGCACACTGTCCAGTTCACTGGGGAGACAACGGCAGCCACCCAAGGTAGAATCATATTAAACTGTCTTCTTGCATCTT---------CATACACCTTCCAGAATCTCAATCATAGGAGCCTT-TGAACTTTCTTGCTCAAGAAAACCATACTATGGTCGCTGGCCCTCTGTAGGTTTCTGCACACGAAACCATCTAACCACG----TTTGAATAGCACATGCATACGTCTGTGGCTC-TTAGCCTGTGTGACATATGCAGGGTTC-TTTGAGGGTAGACTTCAATCCATTGAAGCAGGATGT--------------------AAAACCTGCTGTATATAATTGCATACATGTTTTCCCCCATTTGCCTCTTCATTTTGTATTGTTTTTGGTCCTTCCTCTTTAAAAACATTT-CTGCCTGGTCCACTCAGCATCTTGTTCAGATATTCACATCAACAATAGCTCCTGTTGCTTTCTTTGCCTTTACTTGAAGTATTGGGATGGGTGGTTGGGAGCAGTGATTTTGAAAACTTGCTTTTAGATGTTTTTGGCCTCATCAAAGTAGAAGGACTATTTAGACCATCTTTAGCCTAAGAAAGGCTTTTTATTTTTTTTAAAGTTACTTCATAATTTTATCCAGACAATGGATTTTAGGTTGGAAAGCTGTTTGGATGAATATGACAGCTACTTCATAAACTTCAGGGCAAATTTTCCTTGTGGGCTCATTTACATCCCATGGAAAGACTAGTTTTTTGATCCGTAAAATTGGTCCAGATTAAAAA------CTGCCCCAGTTGGCTCTGATGCGAACAGCAAGGAGCTCATTTGTAATCTTCCCCAGACACCTGCAAGTCCCACTCCAGTCCATATGGGAGGGACTTTGTACCTTGTTTCCACCCTGATAGAAATTGGCTTGTGTGCAGTACTTTGAAGGTGGTATGGCCACCACAC-AGTCATTGCAAAGCAGT-GTGTCCTGTTTA--------TCTATTCCTCCTTACTCTGCACAATCGACTTTTGATAAGTACAGTTTAGTTTCAAAGTCTTGGATTC-CAATTAACCCAAAGGCTCTATCCCTTCTTTT----------AGAAAGA------------------------------------------GGTAAAAAAAAGAACACCTGGCCCCTCACCCCAAGGT-GCAGCACCTCTGGCACTGAGCATTGGGAAAGAAAGCTCCACATCTGTCAGGACTCGCAAGCGTTGCCACAGCAGTGTTCAAATGAAGTCAAATTAAATaatagtacccggcgttaattaagtgctccttacactgttctgggaacttgacacatactgattcttttaatcaagccagcagccttgtgggctgcatgctgcctgtttctttgttttactaagggggaaaccctggcttagtggagcccaatatcttaccagaggccacacagaggttaaatggtggaatgggaatttagg-ctctggtatttggca-caaaaatccCACTCCTGAGCTGTCTCGTTTGCAGAACTATGTAGCCTT s bosTau2.chr20 23971074 1631 + 42952723 gcaaAGAAAATAATCTTGGCAGATTCCTGTATAACTGCTTAAATAT-TTGCACTGCTCAAGAATCTCTCT---ACTTGGAAAGATGACTTGTTGCTTTTCAGTTTTGGAAGACACCTTTACCCTTCAAGCTGTACATGTCTTCACTTACACCTTCCTTGCTACCTGCTTTGAAATTTATAGTTGTTGTTATTATCTGAAGCGGGCTTAAATTATGAGCTATTCTATT--CCTACCGATCATTGC-CTTTGGAGAAAACAGCAGCAGTCCCAGGTGATATTACTTTATGTTGTTTCTCTTCCTAATGCACACAGACACAGATCTTAAAGCATTTCAACGAAGGAATTCTTCCTAACTTCCCTCCTTAAGATATGCAGATTGTGATCAACTCCCTTCTGTGGATTTATTTACATAAAACCATGTAGTCACAATTTTTTGAACAATGCATAGGTATAGCTGTAGTTCTTTAGCATGAGCAGTGCATGTAATGTTCTTTTAAGGATAGATTTCAATTCATTTAAGCAGAATTTTTTTAAAAAAGTATTTCACAAAAGCCTGCTGTGTAAAACTGCTCATATGGTTCACCATATTTCCTTTCTTATTTTCTGTAGT---------TCCTTTCCTAAAAATATTTCCTACCTGGTTCATCCAGGGTC------------TCACATTAA----------------------------------ACGTATCAAACTGG-------------------------------------------------------AGGTAGAAGGAGTGTTTGGACTAGGTTCAGCCTAGGAGAG----------TTTTTCA---TTATTTTATAATTTTATCCAGACACTAGCTTTCAGGTTGGAAGGCTGTTCAGATTAAAATGACAGCTACTTCATAAACTTTGGGGGAAAATATCCTCCTGGGCTCATTTACATCCCTTGGAAAGACTGG-TTTTTGATCCGGAAAATTGGTCCAGATTAAAAAGTGAATGTGCCCCACTTGGCTCTGATGTGAACAGCAACCAGCTAATTTATAATCTTCCCCAGACACCAGCAAATCCTGCGAGTATCCATGTGGGAGTTTCTTTGTACCTTGTTTCCTC---AATAGAAATTGATTTGTGTGCAGTACTTTGAAGATAGCATGGCTACCACCTAAGGCATACTGGAACAGTCCTGTTTTATTTGAATGGCCCTGTCTTTCTCCTCACACTCCTAAATCTATCTTTGACAAGTATGGCTTTGTT--GAAGTCTTGGATTCAAAATCCACCTGAAAATCCCCCACCCCCATCTAATTCTGGTGAGAAAGAGAACGACTATGCAGCTTGAAACTCAGTTCTGAGTTTCATTTGGGTCTAAGATAGGCAACCTTTCCCTCCACCCCAAGATAGCTACTCATCTGTCATT-AGTGTCAGTAATGAAACCTCTGCACTTGCTGAGACTCACAAGAA-----AGGACAGTGTGAAAGTTCAGTCATATTAaataataata----acactgattaagtgcttgctactctctccgaagaacttgacacataatgatttatttaatcaacccaacaggtctgtgagatgggtaccattattatccttgtttaactgaagaggaagttgtggcttagagaaattaaatatcttacccagggtcactcaactagccagcgggggaatgggaattAAAGTCTCTGATATTTAGAAGCAGAAAG--GAGTCCTTAATGGCCTGATTAGCAGAGATGTGCATCCCT a score=9151 s mm7.chr15_random 3487235 554 + 7075849 CCTTCTTTTCCTCTGTGACCTATCCTTTTTGCCTGAGGTCCCAAGGCCAGTGGGAGAAGGTAAAGCAGGGTCCAGAGTTCAAAGATTT---CCTGGAGGGACTGACTTTCTCCACAGTCATTTTTAATGTAG-CACAGGCTCACAGTCTTTTTTCTTTCCA--TTGCCTCCATATTTCTCATCCACATAATTAGATTAAAATGAAGATATATATATATCAAGCAAGAAAACCAAAGTTCTAGAAGAGTAGAGT-----TAGCTCGCTGGCAGC-TACCTTGTTGCTGGAAGATGAAGAATACAGGTCCCTTTAGGTGGTTTCTGCAGCTGCTGG-GTGACAACAGAAGGCTA-------ACACATTGGC----GATCATCTAG-CCAACTTCTCAATTGTCACCCTCA----------TCAAGCTCTCAGGGGATTG-TAATATTCTTACTTAGAATTCATATTATAGACCTTTTC------TATGTGATTTGTATGTGGGGGTCTTGTCTTTTCTGGATTCCCCCCCCCATTTCCTTTTTTTTTACTAGCCAACTCTATTCCATCACGGTG-------AGGTTGTACTGGTGCATG---------GGAGCC s bosTau2.chr20 23973104 565 + 42952723 CCTGCCTTTTCTCT--------TTCCAGCTGCCTGATGTCTTAGGGTCAGTGGGACAAGGTCAGGTCAGCTC-AGAGTT-GAAGATTTTCCCCTGGAGA-ACTGGGGTTC---ACAGTCATTTTCGGGGGAGATGCAGGTCTGTAATCATTTC-CTTTCCACCTTTCCTCAATATTTCTT---TACCGATGTGGACTCAAACAAAGATCCAGGGAAACTCAGCAAAA----CGAAAGCCTGGAGGAACAGAGCAGATATAGCTCAAGGGCACTGTGCCTTGGGGGTTGATGGTGGGGAATACAGGCACCTCTAGGTGGTTTCTGCTGCTACTAGTGTGACACTGAATGGCTAGAGGATCAAGCAGGGGTCATGGGTCATCTTGTTCTACTTCCTG-----CACCTACACAGAATAACCTGATATTCACAAGAGTTTGCTTATATCCTTACTTGAAGCTCTCATCA-AGTCCCTTTCACAGGGCATGTAATT------TGGGGGACTCGGCTCTTCCGGACACCCTC------TTCCTTT-------CCAACTAACCCTACTCCTCCAGGAGGCTGATCCAGATTGCCTTGCTTCTTGATGAAAACTGGAGCC a score=4900 s mm7.chr15_random 3487895 332 + 7075849 TAGCAGTGGTAAGCTGGCAATGCTCCATGAACTTCACGGATCATGGCAGAAGAA--CCCTCTGACTCTGCACTGCATCTGGTCTCCTCCCTTTCCGTGAATGTCTTTATCATGTCTAATAACAC-AGAGAAACACTTCTTTCTATTTGGTTTTTTCTTCTGTCTTTAACTCTTCCTCCATCACTGTGATCAAAACAAAGGA------GAGAAAACAAGGTCAGGGTTAGATGTGATTTGATGCAAGGCAGTACTTTC---------------CCCGAGGAAGAGTGACTTGGACCGAAACAA-------------------------TATACATCTCCATCCCCGGGGCTAAGAGTTTAATAACCTTAGAATTCTTTGGGG s bosTau2.chr20 23973940 358 + 42952723 CCTCAGCACCTAGCTACTAGCATCCCCTGCAGTTCTGGCACCATAGCAGAAATATTTCCTCCAACCCATTCTTCCATCAGCCCCCCTACCCTCCAGTGTGTTCCCACTTCACAGCCAATCCCTCTAAAGAAGCCCCTGCCTC--------TCTTTCTCTTTCCTTTGATTCT----------CTATG----AGGTAAAGGGACCTCTGTGAGGCCACGATCAGGAGTAAATGTG-TGTAACATGAGGCAGTACTTTCTTCTCAGAATTCTTTCTCATGGAAGAGTGACTTGATCAGAAAGGAACTGAGTGGTGTTTTTTGTTTGTGCTTTTTATTTCTTACTCTGAGACCAGGACTTTAATAACCTTAGAATTCTTTTGGG a score=9406 s mm7.chr15_random 3488492 768 + 7075849 GAATAGGTCTCTGGCATCTCAGG------------------------------------------------CTTCCTCTACCTCCCAACTTCTGTGGCCCTAAGTATATGCCACC---ACCGCTGCAT------CATGACATCTCGATGGCAGCTGA-------CTGAGATAGCGAAG-CCTTTGCTTCTTA--ATGAACACCAAATGTCAGGCTGCATATACTAGGAAT-CACCTATACATTCTG---TCAGAAAAGAAAGAGGGGGTTGGGAATTGAAGAAATATAGCTAGCAGAACCTAAGGCACAGGCTGTAGGTAAAACTCCTCAA-----AGCTAGTTTTGAGTTCATT-AGTATAGACCTCTCTTCTGAAGAAGGACC-CAAAATCTGGTTTCTTTGTCCTGAGATAAACC--AAGGGATG------CTGTCTTCAT--GCTGAACGATTGGT-TGAAGA---GGTGAGTCTCACGTGGAAAAACAACATAAA---CGGCCAGCAGAGAGCATACTTCCAGAGCTTGG--TGGAACAGGTCTCAGGCTCTGGGCAGGCAGGTACAGAGGTCTTCAA---CTATGCAGA-AAGAATTTTTAGAGTACATCCCAGGCATCCAACTTTAAGACAAGAACTCCAGGAGAGTTGACAACAGGTGACTCACAGTCTACACAT--------------GGAGAATTTGGG---CTCCACTGCCTCCCCTTCTTCATACCTCTATC-----------CTGCTACACCCACAGTATTTGTCTTTTCCACATCAAACTGTGCGAGCTTGCTAGCAGCATTTGGGCAGTTGCAATTTAATTAGGCAACCGGGTACAGACTCACTGGGATTTCTGGAGGTTGGCTTGGGGATTTGTTATCTTC s bosTau2.chr20 23974595 844 + 42952723 AAACAGGGCTCAGGTGTCTGAGGCAGAGGTGGGATCTCAGCTCCTGCAGGGTTATCCTGGGGAGATCCTGTCTTCTCCCGCCTCTCCCCCTCCACAAACGGGACTGTACTTCTCCCAACCCACTAAATGAATGACATGATGTCTTGATTGCAACAGAGAATCTTCTGAGCTGGTCAAGACCCTTGCCACTTGTTTTGGTCAC-----AGCTAGTTACAGGTATTAGAAGTGCATCTGCTATTTCAGGGATTAAAAAAAAAAAGGGG----GAAAGATGAGGAGATA----CTGCAGAGTGTAAATCGCAGTTTATAGGAGAAACACCCCCACTGCCACCCATCTTTGATTGCATTGATTGTGAACCACCATTTTGGAGAAGGACCTCAAGGTGTGACTTTAATCTCCTGAGATGAGCTGGAAGACATGAGCCCTCTGATCTCATAGGTTGGGGGTTGGGCGTGGGGACAGGGAGAGACTCAGGTGAAAAATCAAATCAAATCGCTGCCACCAGAGGGCACATTTTCTAACATTGGCTCAGAGCAGATCTTAGAC-CTGTG-AGTCA---------TTCTTGAACTCCTGTGTGGATAAGAATTCCTGGAGTGCATCCCAGACATCTGCTTTTTAAACAAGAACCTCGGGTCACATGGT-ACATGTGGGTCACAGTTCACACTTGGGGACATGACGGAGGAGAACTTGGGTTCCTCCACTGCCTCTCTTCCCTGGTACCTCCATCCCAGGAACTTTCCAGTACCCCGACAG---------TCTCCACTTCGA------------------TAACACACGTGT-GTTTCAACCGGAACAAACCAGCGTCTAGACAGTCTGCAGGGTGTCTGAAGATTGGATTTAGGACTTGAGATCTTC a score=7940 s mm7.chr15_random 3489378 979 + 7075849 TACGGTGCCTGAAAGACACCTTTCTGGAGCCAAACCACCCA--TGCCTTCTTTTCCTG---CTTGTCTGCTGAGGGATGGCTTCGAATAGACCTGAGAAAGACTAACAGCCACACCCTGCTCTACATAGTCAACCCCCACCCTCCGTTTTTCTCTCACCTCCATGAAGCTGGTTCATTTAGCT-TGCAAGGGTGG------CTCCTGGCTGAGTAGGCG--TGTACACACTTGAATATCCGACCAATTTGAGCCCAAGCTCTGA------------------GTTTTCCCATT-----------GGTTATTTGGTGACATTTGGAA-ATTTGTGTAAGCTATGCACGT-------------TCTATGTAAGTTT--------CCAAAAAG---------------TAACAATGT---------------TAAGGTAAGTGCTAACTTTATAGGCTTCCTCAGAGGACT-AATGAGGTAGTGTATATTCC----------ATAGGACTGACTGACTGGTGCTTCAGGCAAACTTGTAGAAACT--------GTTAATCTGGAT-----TAGAAGGAAAATCCTGAAAGAGTATGTATACAAATATATTTACCGGCATC---------CACACAAGCGCTTATGATTTCATTT-CTTTTTATCCTTTCCCAGACATGTCAATGCATCATTGCGTGTGATTTAATTTGTAATGACATAAACATTTCTGATGTTTTATAAGTAAGTTAATTTATGAATCAAAAA-----TTTGCTCAGCCACACACCTTGATTTTATGCTTGGTAAATGAGGCTGACAAGTACTTGTGTTTTCTTTGAGTGAATTACCTCTGTACAAGAGTATAACCCTTGTGGCCGTGCTTGAGTTTTTCCTGGTAACTATTTCGAGTGAAGTTGTACAGGAT----TAGGAGAAGCGAAGCTGTTTCTGAAAGAATGTTCTCACACTTGATCTATGACAGGGAGTCAGCCCAAGTTTGAATGTAGCCAGGTA-CTAAGAAATAGCTTAGGTC-------------------------TTATGTGTGG--GTTAGTGGTGACACAGAGAGACAGGCCAGGCTCGG-------------TGAACTTCCTG-TAATGATTCTTCTATTTCCTTGGCTATAAGAA s bosTau2.chr20 23975439 1065 + 42952723 GAAGGTCGCTGAAGGACATCTCTTCTGAGCAAGTCCTCCTACTTATCCTCTTTCCCCTAGCCCTGTCC-CTGAGAGATGGCTGC------ACCCAGGAGGGACGA----------CCTGC-------AGTAA-----------------------CATCAACAGGAAGCCGG---GCTGAACTGTGCATGACCAGCCCGTTCTCCGGGCT---TGGGTGAAAGCACAGACTCTGCTACTCGACAAGTTTGGGTTCAAGTTCTGACACTGTGTTTTTGTTGTTGTTTTCTTTTTCTTTTTTAAAAAATTGCCTGgtgacattaagcctagttatattaactctgtaagcctgggtttccttgtttataaaaatatagggttggCCAAAAAGTTTGCTTCAGTTTTTTCATAATGTCTTACAGAAATAGGATAAAGAAAGAACCAACCAATTA-----------AGGATTAAATGAGGTAATGTATACACCAAGGCATTAAAAGGGATTAGAAGCTTGAAGCTTGAAGGCAATGTTTATGAATTTGGGCTTGTTTAATCTGGACAGGGGTGAAGGGGAAAGGAGGAAAAAATATG--------TGTATTTCCAGGCATCAGAATAATTAACACAGAC----ATGAGTTCATGTACTTTTTATTCTTTCTCATGCGTGTTGATGTATACTTG---ATAACATAATTT-TAAGTTTACCAAGTTGTACAATTTTTT-----TAGATAAATTGGCAAATCAGAAAGACTCTTTGGTCAACCACATGCCTTGATTTGGGGTTTGG-AGATGTAACTGTGAGGTTTGTG-GTCTTGCTTGAGTGGATT---TTTTTGAGAAACACCAACTCCAAGAGTGATGGACAGTTTTTGTCTGGTAATTGTCATGTG-GAAGTTTTGTAGGGTGTTGGGGGTGGGGAGCAGCTATTCCTGAAAGAGAATTATCCAGACTGACATGTGACTGGAGGTTCATGAAAATCTCCATGAAGCTAGATAGCTAAGAAATGGCCAGGGTTTGCTCACTGATCAGCCAGATTGGAGTGATTCATGGCCACTACTGGTGACATAGAAAGATAAG--AGACTGGACACCAATGGCCCTTGCATTTATTATTCATGATTCTGC-ATTTCCAGAGCTGTAAGAA a score=4930 s mm7.chr15_random 3490580 107 + 7075849 atCCCTCTTCCCCTAGGTAACCCCACTCGCTGCTACTTTGAAAATCTAAGCAAGTGAAGCAGAGCAGTGCTTTGAGAGAGCCGAGGTACTGCATACGGATAAGATAT s bosTau2.chr20 23976506 101 + 42952723 ACCCCACTTACCCCAGATAACCCCACCGGCT--TATTTTAAGAATCAAAGGAAAT----CAGACTAGTGCTTTGAAAGAACTAAGGTGCTACACAAAGATAAGATAT a score=35041 s mm7.chr15_random 3491076 1117 + 7075849 TCAGCTGAGAGTGATCATGCTAACTACTGGTACCTTCACCAGCCAGACCTAGCAAAGCTGCCCTTCCCATGGCTCTGCTCGAATCTCCATTTATTTCCAACTCTCTCTTCTCACTC-TCCTAATGACACTTGA-GATGGGTTTCTTATCTGACTCTGCAAATACTGAACCATTTAAAATTTAACACTTGCGGCTTTTTTTTGCTGACAAGGCACCCCCAAATCCTGATTCAGTTTTAATACAACATTAATGCTATTTATTTTTCTTGGTGCAATAAGTTTATATTAGCCTTTTAACAGTTTACTTTGTGCAAAAGGAGTCATATCAGCAGGCACTTCTCTGTAACATCTGGGCAGTTGAGAACATAATACTTAAATATAACCTGCGTTTAAAGCCTTCCTTGGACAGATGGCTAATTTTATTGATCTAATCTTACACTTAGGAATAGGTCCCATGATCCTTTGCTCAAAATCCTTAGAGTGAGCAGAGAAATAAATAAGATGGCCGGTGGCTGTGAATTAGGAGCCTGTTACTTGTCTGTGGTTTA-TCTTTAAATACTTCCATATTAACAGCAGCAGTCTGGATTGCTTGAGTCTCTACCCTAGGGGAGTTCAGACGACGCTTGCACAAATGCAAGGAGGAAGGCAACACTCTAGCCTACGAGTTTGTGTCTTTTT---ACCTCTTGGTGACAGGGTCATAGCA-TGGTTAA--ATGTGGGGCATTACCTGTGCCCTAGGCAGTCATCTATGTTCCCTGG---GCTGATTAGTTATCATTTGAGCAATTTTAATGTGAAGTCCATTCTCGAAGGCAGCTGCAGAAATATATGATATGAGGTAAATTTACACAAGAAACTGTGTgtgtggtggtgcctgtctgtgtcctaggaactgggcagtgaaagcagtaagcttgtaaatcccaggccacagtgggctgccacgtagtgagactgtctcaaaaacaaaacaaaaCAAAAAACAACACAGCAACAGACCCAAATTCACACTACAGGATTTGTTAAGCA---------GGGTTAGCTGTGTTTTCCCTAGTG-AATATATAATTGGCTAAAAAGTTTGCATGGGTCCCTCTAATTTTGCACAGAT--AGAGTAAGAATCCAGCAAGTCC s bosTau2.chr20 23976609 960 + 42952723 TTATCTAACAATACTCACACTAATTATTATTATCTTAACTAATGGGATC------AACCTTACTTTCTGAAGCTTTGATCTCTTTTCCAGT---------CTCTTCCTCTGCATTCCTGTTAAAGATACATGAAGATTCTTTCTTTGCCTGAGTCTGACAGTCCTGAGCAACTTAAATCTTAACACTTGTG-------TTTGCTGACAGGGCACCCA-AAATCCCGAATCAGATTTAACGCAGTGTTAATGCTGTTTATTTTCCTTGGTGCAACAAATGTATATTAGCCAGTTAATGGTTTACATTGTGCAAAAGGAGTTGTGTCAGCAGGCACTTTTCTGTAACATCTGGGCAGTTGGAAACGTAATATTTAAATACAACCTGAGTTTAAAGCCTTCCTTGGACAGATGGCTAATTTTATTGATCTAATCTGACACTTAGGGATAGGTCCCATGATCCTTTGCTGGTAATTCTTAGGATGAGCAGAGACATAAATACACTGGACGATGTCTGTGAATTAGACGCTTGT---TTGTTTCTAATTTATTCTTTAAATACTTAAGTATAAACAGTCATGGTGTGAATTACTTTAATCTCTACCCTAAAGGCGCTTAATTAACATTTGAAGTTATCCAGGGTAGAAGGTACTGCTCCAACATAAGAGTTTGCACTTTTTTTTAATCCCTTGGTGAT-GTGCAGTACCAGTGGTTAAGTATTTTGAACTTCACCTCTGTGCTGGCCAGTAATCTACACTCCAGGGCTAACTGGTTAGTTACCACCTGAAGAACTTTACTGCAAGGTCCACTTTCAAAGGTGGTTGGGGAAA---------------------------------GTACTTTGAGTGATGC-----------------------------------------TATAAA--------------------------------------------------------------------------------AAATGTAGACTAGAGGGTTTGGTAATTAGCACAAATTGTGTTAGAAATGTTTCCATTAGCGAAATATATGGTTGGCTAGAAAGACTGTGTGTGCCCTTCTATTTTTGCATGGACAAAAAGTAACAATCCAGCAAGCCC a score=8940 s mm7.chr15_random 3492472 535 + 7075849 CATGTGTCGCAGCACATACCAACAAGTGCTtgtgttaatctggtcaattaacatcagctgctggataaacagcttcaaagt-ttgttaacctcatacaacatttactttccatttattcacagcccaatgtctgtgtttctgattgggtgtttcctctggatgactcccttgtgtgtggtgaTCTTACCATCCTTCG-------TTTAGTATCTCCATCTTGTCATGGTACGGTCTTCAGCACAGACCTACAAGG-----AGGGAGGTGAACAGCAGGAAGGAGAGTGGGAGGGGC-TTTCTGTGTCAGAGCAGGCCAcagtcacatagacctagctgaattgcaagggtcccaggaaatgcattttagctgcgtacatgggaagaaCCTGAACCCAGGGCAGTCATTGTCGCTGATGCTCTATTTTGAAGTTCCTTAAAGGGCCAAAGACAAGTGTCATCAAATTTGTAGAAGC-AGGCCGTCT-ACAGCTTTGGTGCCTTTTC-------------GCCTGTGGATGAGTTCGAGCTGGAGTGTAACTTTCATGGTGACGTA s bosTau2.chr20 23977722 519 + 42952723 TATCTGTCTCAGCA---------ATCtgcttg----------------------cggctgt--aacaaacaacttcaaaatctcagtgacttgacctaaaatttatttttcatttactccaagcccaaagtgaatatttcttcatgggcagctcgcttgggctgctctcctccaaaaggtaacttgaaaacctgtcacttggtctttaatatctccatcttgtactgccaccatcttTAAAATGGGCCTCCAAGGTGTCATGGAAGGTAAATAGAAAGAAGACTTGTATGGGAGACATTTGTGTGCCGggccagaacagggtcactgggccccgacagaactgtaatgaagctgggaaatgtagttcaactgtgtacatgggaagacagttaccacatgtggtgaaTTTTCTCTGAGGCAGTGATTTGGAGCTCCTAAGAGAAC---AAACA--------CGGATCTGAAAAGACTAAGTTATTTGAGAACTTTTGTGACTTGCCCATGAATATTTGTATATGTGGCAGAAGTGGGCCTGGAGT-TGGCTTTCATTGTAGTGta a score=16953 s mm7.chr15_random 3494388 1146 + 7075849 AGGCAAAATAAT------AAGGAAAAGAAAGAATGGCTTTCTAAAG-AGACAAATTGAGACTGCAGCCACCCCACACCAGTTCTCTAGAAGCTC-TTCTATTTGGCTTTCATCATAGAAAGGATCCTTCATGGTAGA-TAATTTATTCAGTGA--GATGCTTCTTAAAATATAACAATAATCTTATAGACATAGCAGCCTGCTG-GATAAGGACTAAGATAGCGTGGATAGATCCCACTGTCAGTCAATCCGTAGGTTTGCTTGAATGACT-----TTCCAAAGCACCTTTGGAAAGATGAATTCATTGTGGCTTTGTCATCTTTGTTCCACTGGGAAGTCA--GGCCACTTAGGATGACTTAG--AAGTAGCCAGATGGCATAGCCACGACATGAACCTAAGCTACCCAACAGTCTAACCCTATTGCTCTGCAGTATAGAGGTGTATCTGTAGCCAACAGAGAAGATAACAGTGAAACTTCTGGAAGCTGACTTAAATCTCGCTCTGCTG---GGAGG---CTTGCTATCTCATAGACTTCTTTGCTTTCCTGGTGTTGAATGTTGACCCTACATTAATCTGACATTGGAATATTTGTCCCTTATCTCTGCCCAGG-TAAATGCAAGATGTGAGTCCATTGTGCTTGGGGGGAATTTCACCAGTGAGATTTCCTCTTTATCCTGCCTTTGGAGAGGTCATGTGCATGCCATGGACAGTCTAGAATGACTGAGGAGTCTT------------GACAGTCATATCCCCAATGGCTGGTGTACTGATGACAACCCCTGAATCTTCTGGGTGTCTCTGATAGGAGAGATTTTTGGTGCACCATGGACCACCCTCATGA----CTGCCTAGCTTTG----------AAGTTTCCCATCTCTCAAATATTCAGTAGCCACCTTCTTTGGTAGTAAGCAATACTTGTTAGTCTTCCAAAGTGGGATAAGTCGAGGCTCTG-CACTCAAGTGACAAGGCTTTCC-------------------CTGTGATGTTCTGAGGGTTTCTAATTGGCGTCGTGAAATAAA----------------GCAAGCAAGCATTA-------GGTTGT------GTAATGGATAAACTTCCATTACCACCTGTATGTGGAACACA---------------GGGGAATCACAG--AGACTCCAATCAGACAAATCTGCGTTTGGATTCTAGCTTCAGCTTTTACGGTTGACTGATTCCAGA-GGTCTGCTTCATGTTCCATCCTT s bosTau2.chr20 23978506 1134 + 42952723 AAGTGAAATAACTACCCGGAGGGTTAAATAGAGTGAATTCCTAAGGCACATCCACTAGAACTCCAGTT--TTTACCACAGTTTTCTAGAAGCTCCTTCTATTTGTGTCCCAAAACAAAAAGGACTATTCATGGTAGAATAATTTATTCAGTGACAGATGCATCTTAAAATACAAAAATCATATTTTAGACACCACAGCCTGCTTCGACAGGGATGAAGATGGTGTGGACTGATCCCAAAA--AGATAAATTGATGTTTTG-TTGAACCACTGTGTTTTCCAAAGCACTTTCAAAGAAATAATCTCACT-TGATCTTGTAACCCTCGCCCCACTGGGAAGTCAAGGGCT------GATGACTTAGCAAAGAGGAAACAGGCCCAAACCAGGACATGAGCCTA-------------TC---CCCTGATGCAT--CAATGCAGAGGTGTTCTTGCAGCTGCTGGGTAAGA-----GCGTCACCACTG-----TGACGTG--TTTAGCTCTGCAGTCAGGAGGGACCTTGCCA----ATAGGACTC---------------------GCCCACCTTTCATT--------------------------------CGCAGAGGCTCCATGCATGTCATGGG-ACACTCTG--TGGAATGAATT-----GGTG----CTGCTTTCAGTTATACTCCTGACTGGTTGATGTG--TGTTTTGTAAAATACATGATGACCGAGGGGCTATTTGCAAATAAGAAGCAGTTATC------ATGGCTGGAG-------GATGGCCCCAGAATCCTTCTAGTGTCCCCTGTAGAAGACCCTTCTGGGGTCTCAGGGACA---CGCAGGATACTCAGCCTGGCTTTGTCATTCCTCCAAGCTTCCCATTCCTCCAACAC---GTAGCCATTTTCTTTAGTGG-AAATGGTATTTGCTAGACCTTCAATGTGGCGTATTTCAAAGGTTTATCATTCAAGTCTCAAGACTTTCTGATAATTTCTTAGGCATTTTTTTGATGTTCTAGGAGTTCCTAATGGGTGTAGTTAAACAAGTATATTGTGAGGTTGGGAAAAGAAGGATTCTTTTGATAGTTGTTTGAGAGTAATTGATGGGCTTTGGCCACAACCTGCATAAATAACACACATCCCTGCAGCTTGGAAGAATTGTAACAAGAATCCAATCAAACAGACATGGGTTTCAAGCTTGGCTTTAAAAGTTATGGCTGCCTGATTCCAGATAGAGTACTTCATGTCTTAGGCTC a score=11122 s mm7.chr15_random 3495591 324 + 7075849 AGCCTATAAAATGCCTAGACATTTGCTGCTCATGGTGCTCATCA----------------ATTATGTTAGTTATGCTTTATAGGGTTTATATACTAGCAGAGACGGTATTATTTTTTTTCAGATT-GACACAACCTCAGACTTGGAGGACATTGACATAG-CATGCAAATGAGCTGAGGAGCCCATGAACATGCAAATGAAAG-AATTCCATTGCCTTAATTTTATATCACAGCTTTTTCAAATATGCGCCCTCAGATGATGAGTTTTAGTGTCTAGGTTAGCCATAAGGTTCATGGCCTTGACAAAAGAACACGGAATCAGAGTCAAATTTAAT-ACAAAATA s bosTau2.chr20 23979722 338 + 42952723 AGCTAGGAAAGTACTTAAACATTTGGTTCACAATGAGCACTCCAGAGTTAGGCCATATTCATTAGGTTA-TTATAGTTTATAGAGTTTATATAGTGGTAGAGATGGTAGA----TTTTCCATATTTGATATAACTCCAAATATTGACAACATCGACACAAATGTATAATTGAGCTTAGGCTCCCATGAAAATGGAACCGAAAGGAATTTCATTTCCTTGATTTCATATTCTAGATTCTTCAAGTGTGCATCATCAAACAATGACTTTTGGTATCTAGATCAGTCATAAAGTTCATGTTATTGATGAAAGATC-TGGAATCAGTTTAGAGTTTAATTACAAAAAA a score=39251 s mm7.chr15_random 3496482 1453 + 7075849 ATTTCTTCCCTCTCCCCACCT---TTGATTTGACAATAATC--TGCCACAATAACTTTCTCTGAATGCAGTTCTGAACTTGTGACTCTCATGTTTACTATGTTTTCTTTTCAGGGCCCCT-CAGCCTTCTAGAACCTAGGGCTGGATACTCCAGGTTTGGGATAACACTACC----TTTCTTTTCCTGTCTTGTCTCTGAATTCATTTCACAGTCCCTTCTCCAGTCAAGCTAGATTGCTTGCCATTTTATAGACCCTCTTCTCCTTTTTCCAGTTCTGAATGCTGTCCACATGTTGGTCTGA---CTTAAAATATTGCTCTCTCATCTCTGCACAAGGACAT------ACCTTTGAAGGTATGACTCAATTGTTCCTG----------------------------GCCAAA---------------------------------------------------GAGTTGTC-----------------------------------------------------------------AAAGAACACCCGGT-AGGTGGATGCCAGCCCA--CGGGTCTCC-----TCTTGT------------------------GCCTGGA---CTTCTGGTCGTGGTGGC------------------------------------CTTT--TGGTTTTGGTGTATTTGACTCATATCCCCTATT----CTTCACTTTTCCAAGAAAAGCAACCTGATTTCTCTGCCTTTGCCTCTCCTCTGTTGCCTGATGGAGTGTCTTGTGTGAGGCTGGCCCTTCAGCCGACAGCTGTGAGATGGGAAACAACAGCCTCATTCTGGCCAAATGCGTTTTCACATCGTGTGATTAATTTGGTCCCTCTCGCAGCTCCCAAACTCATTTCCTTTCTCAAGTGCAATACAGAAAAGGTGTCACCTCCGCGTGCTAACGTTGTTGCTCAACCTGTGCAGACGTTTGGAAACCCACACTGCAGTGTGATTTAGAGAGGGGAATGCCCCTGGGAGTCTGTCTGCTGCAGCAGGTAATTTAAGTCCCACCTCCCGCCTGCTGCAGGCTGTTGGAGTGTCAGGGTTTTAAGGAGACCCTGATTGAGTCTAAACTGTGAACTGCTTCCCTGTTGCTACCCAGAGACCAAGTCTGGTTTGAAATAACCTGTGGGTCTG----AGACCCGCCTTTCATGCA--------GAGGTTATGAAGCCAAGTATACAGGACCATATACTTGGACACCAGAGGA-CAGGGGTTAGGAGGGGTTAAACTAGCCA---GTGTTCAA---CACGCCTTTGCCCATATGCTTTTAAAACCAGAGGAGAGTGAGGCTTCAATGGGAGTG---------AGATGATTAAGAAGGTCAAGTTGCAGGAGAGGGACTAAAACCGGTCGGTCTACCGTAATGAGGTCTGACCGCAAGGCC-ACTAGGAAAACAGTACCCCAGTTCTTCAACATTCATCTTCAGTTTTATTGTGCTGACCCTGGCTTGCTTCCAAAAATCAATCCTGCCAACCCTGGAAAGTGAAA-AGCCAAAAGCTGGACGTTCTGCAAAGGTGTTTTTCATTGTTTGCCTTCTAAGGACCAGCGAGCCTGA------AAGTGATTCTGGGCCGCCTGATTGAAAGCTCCCG-ATCGATTGACCAGT----TAACTGACTTCTTGATCCATCTGTATATCAAGAAATTTATGA s bosTau2.chr20 23980291 1685 + 42952723 ATATCTGCTCTCTCTCTGCCTGTTTTGAGTCAACTATCCTCCCTgccagaataatctttctaaaatgtagttccagtcctgtcacttttgtgtttaatat----tcctttctggctccctactgcattccagactctaaagctgaaCATCCAAGGTCTATCACAGTATGGCCCCACTTCCTTTTCCTGTCTTCTCACTGAATACAT-----GATCTGTATTCCAGCCAAGCTCGATTATTTGCTCTTCCATAGACC-TCCTCTTTGCTTCCCAGTGGTGACC-CTGTCCACATGTTGATCCTCACCCTTGGAATATCCTTCCCTCATCTCTGCCCAAGGAAAGGCAATGACCCTTCCAAGCTTGGCTCAGTTCCCCCTGTTCTGTGAGGTCTTCATGCACCCTCCCAGCCAGAAGGCCTTTCTCTTTTCTCCTATTTTGCTTTGCTTTACGTTTTTGGTGTGAGgagctttcctggcggttcagatggtaaagaatctgctgcattgcgggagacccaggtttgatccttgggttggaaagatcccctggtgaagggaatggctacccattccattctccagtattcttgcctggagaatcccatggacagaggagcctggggggctacagtacatggggtctcagagtcagacaagacccagtgactaacaTGTTTACTTTCATGTTTTTGGTGTACTGAACT-GTGCCTTCTGTTAGATTGGTATTTTGTGAAGGAGAGCACTCTGATGTCTTCACCTGGGGGTCCCCTCCATGGCCTGCTGGGGTGTCTAGCACGCAGTTGGTCTTTC---CCACAGTTATGCAATGGAAAACAATGGCCTTGTTTGGGGCAAATACGTTTTAACATGGTGTGATTGATTTGATCATGCTCCCAGCTCCCAAATTCATTTCCTTCCTCACTCACGATACAGAAAAGATGTCGCTTCTCTGTGTCAACATTTTTTCTTAACCTAAGCATACATTTGAAAACCCACACTGAAGAATGATTTGGAGAGGGAAATGGCCC-AGGAGTCAGTGTGTAGCAATATGTAATTTAAATTCTACCTCCACGTTGCCAGCGGCTATTGGAAATGTGGGTTTTTAAGGAGCGTCTGATTGAGTCCATACTGTGAAATATGTTATTTTCGATACCCAGAGAAGAGGTAGAATTTGAAGTAACAAGTTGGACTGCCTCAGATCGGCTTTTTAT-CATGGTTTGGGAGGTTAAGAAACAAAGGCAATAATACTGTTTACTCATACATCAAAAGATCGTGGGGGAGGAGGAGTGAAAGCAGCCCAGTGTGTTCAGTTCCCCTCCTTCCTCCATCTGTCTTTGAAACCAAAGGAACATGAGCCTTGTGTGGGAATGGCATTGGCAGTATAATAGAAAAGGTCAGGTTGCAGGGGAAGGGATAAAGTCAGTCCATCTCTTGTAACGAGATCTGATTGTGAGATTGGGGGGGAAAACAGTAC---------TCAACAACTTGCTTCAGTTTTATTGTGTTGACCCTGGCTTGCTTACCAAGATCAATTCTGGAATTCTTGGAAAGTAAAGCAGCCAAAAGCTAG----------------------AGTCTTTGTTTTGTAAGGACTGTTACACCTGATAAAATGAATGCCCCTATGTGGCCCAATTGAAAGCAACCACATTGATTGACCCATTCACTAATTGATTTCTTGATATATACATATA-CAAGTGTATtatga a score=5208 s mm7.chr15_random 3498249 628 + 7075849 tatatatatTGCTCCCTCTAAAATTCTTTCAGTTTTCTTTA-TGCTTGAATATTTTCATGATAAATTGATGGAAAAGATGAAGTAAATATTAAGGAAACAAGTGGGG-----ATACATTTATGCCCAT-AAAAGTGAGGTTCCAATTATTATTagggagcttcctgtctctgcttctccagtgctgggattacagctaccagtcctggcttctctcgggagtgctgaagatcaaagctcagctcctcagctttttatgataagcactttatccactaatttatctctcccagcctcTGCTTTTTTACTTTTGTCCTGTGCCCCATTCCTCAAGAATGCCTTCAGTTCTTC------TCTGCCCTGCTCTGTGCTCCATGGGGCTGAATGACTGGGCTCCACT---------TCTCCACAGAGGGGAAGAGAGCCTGGTGGAATTCCTTCCATTTCCTCCCTGATTTTGAGCTGCTACA---CTGGCAACAGCTGGGTTTCCCTAACACTTGA-------AGGTCCTGACGCTGCAGGACCCTCCTCCAGTGGGCTCCAGGAACAGCCTTTTCTGTA-TGTGTGTGTCTAGCCCTGTGGGTACTGGTG---------------TAGTCTCTGGGTGC--CCAGGCATCCTGGAGATTCTTAACGCTGCTCATGCCTCTA s bosTau2.scaffold8338 671 571 - 33504 TATACATAT-GTTCACTCAAA----CTCTCACTTTTCTATAATTTTTGATTATTTTCACAAT---TTGAGTGAAAAGATGAACTAAGTATTAAGGAAATAAATGAAATGACTACAAAGTTTTCCCCACGAAGAGTGGGGTTCCA-----------------TCATGT-TCTGC-TCTGCA----------CACAAATAACGG---TGGGTTTTCT--------------------ACTC------------------------CATCCTGCTCCTCActccacgtttcc---tctctgctctt----ctctgccctgctccttgctctctggggctgggcttactgcatcacttgggctgctttgcccttggcttctttgagttcagctgatgagagacatcagaaggagatcaggagagccggggagaggctctggtgtacttgtgccgtgatccaccctcctttggaggcactgcattgctggcagcagtcacgtttttctaaaactgcatctccatggcttctgactctg---------------gctggctcctggaacagttttttcttcactttgcactttctgccctg-gggtattggcagcatctcactgctgctggcctctaggtgcatcaacacctctagttgtttctcagagctgttcacacgtctg a score=12551 s mm7.chr15_random 3498877 400 + 7075849 TACGTAGTCTCTTAATTAAAGCATTTTAAATATTAAGTAAATACTTCTTCCTTCTGGGACCTTGATAAATATCTTTGGTCTCCCTGTTTTGTAATGAATGCCTTCTTTCCGTCCTGCTCCTTCCAGGGCATACCCACAAGGCTCTGATTTGTGTATAGCTTGCATTTACAACTCTCCCAGGAGCGGCTCTGATTCAGCTAGAGGCTGGCTGCCTTAAATCTACGCAGTAACTATTAGCCGAGCGGACACTTTCATCTTTGGAGATTGAGCTTGTCTGCTGGGTGAGGATCTGATGGCCATCTGGACAAGAGCTGAGTGTGACACACCTGTGC----CCTTAAGGGGCTAAGAACTAATGACAGCCATCTCAAAGATTCTCAACGGAAATTCT-----CCCag--ttctaga s bosTau2.scaffold8338 1530 410 - 33504 TAAGTTGTCTTTTAATGACCATATTTTTAG-ATCAAATAAATTCAACTTCTTACTGGGACCCTAATTGCTACCTTTGTTACCACTGCTGCATGATATATCCTCTATTTCTACTATTTTCCTCCTCAGGTGTAACCATGAGGTTTTGATTTGTGTTTAGCTTGCATTCAGAACTCTCAGAGGATCAGGTCCGATTTAGCTTAACGATGCCTGCTATAAATTCACAGAGTATCTACAAGAGCAACAGAAACCTTTATCTTTTGAGAATGAGCTTGTCCTCTGGGCCCAAATCTGCTGGCTTCTTGGCTAAGAACACATCGAAACTGACCTATCCTTCGCTGCGTGGTGTTGAGAAATTACTGCAGTGATGTCCAGGACTTTTAATAGAAATTCTAGGAACTCAGGTTTCTAGA a score=4646 s mm7.chr15_random 3500203 468 + 7075849 CACATGTGGAATGAAGGGAAGATAGTT--------------AAAGTTTCCA--------AACCAAGCTCTCATGGCACTAGTGACTTTGACCAAGGGGAGAGGAACAGCAGGCTTGAGCTCCCCCCCCCCCAGTTCTCCCCTAGATTAAGTTTTTCGGTGGTTCCTCtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATTAAAAATT-----------CTGTTCTAATTTTTGTGGCCAT-AGTGTTATAGGGTTAATA------GAATTGAACATGCTTGTTAGCCAAACTAAAAAGGAATGTACTAGTCCACACCCACCATCTTTATTAG-ATGCAGCAGAAACCGGACTTCAGATGAAGAGTTGAGTGAGAACAACTTGTCTGAAAGTCTG-------CCAAGAGGATA--AACAAGAAGGCCAAGGAGGGAGAGGATGTGAG-------------TGGGAA----------------TCTCTTATCAAGTGATCTG--TGTATGGGACAACTGAGTTTAAATTCACAGAAGAAAATCT s bosTau2.scaffold8338 1941 494 - 33504 CACATACGAAATGAATGCAAGATAATTCTTCATCTCTTGAGAAAGTTACCATGAACCTAAATTAACCTCTTAGAACTCCAGGGAATTTGACCTGAAGGGGAAGACCA-CAAGCTTGGACTTTCTCCCAC----GTCT-------GTTAGGTTTATTGCTGGTTTTTATGC---------------------------------TAATCATAATTTTTCAACTCAATTTTTCTA--TTTCTTGGCTATAAATATCTTGTACCTGATACTCTGCTGATTA---ATGTTTATTATTCAAACTTTAAA-GAATTAATTAGTCAACACCCATtgtcttcatttgaatttcccaggaacagaccataggataaatatttgaattaaaatcatttatttaaaaagtaaaacaaaccaaacagaacagcaacaaaaa----aaggacattggggaagtgagatagggagtccactgagaaggcagtcagtgaaggttttctcatcaagtgagttaacactgtgagtaattagagcttagacttatggaagaaactct a score=5083 s mm7.chr15_random 3500832 156 + 7075849 CAGAAGCTGCAGATCCTGGTGGCTAGAAAGGGGCTGACCAGCTCTAACTCGGTGAACCTTGAAGGCTTATGACTAGTGC-AACAGTTCCACTCTGCCACTAGCTGACTAATTCTGCTTGGAAAGGCAAGGTTGAATGCCCTTTACCATTTTAATAGA s bosTau2.scaffold8338 2915 156 - 33504 CAAAAGTTGCAAAGACTGGTAGCTGGAAGTGGGCTTGCCAG-TCTGAAATGGCAAGGCCTGAGGGATTTTGGTGGGTACTAGCAGTTTTTCTAAACCCATAATCAACTAAATTTATTTGGAAACTGAAGACTGAATTTCCTTTACCATTTTGTTGGA a score=13097 s mm7.chr15_random 3501623 693 + 7075849 GGGTTTTTGATCTGAGAAGCACCATCGATGTTCACAGAAACAAATAAACC-----------AAAGCATTTTATTCATTTGTTCTGA-------GGTCAATAGATTTC--AGTTTTCATTGCATA-AGTCATGCCTTGTTG---AGACGCTGGTTCATAGATCACTGATTGCTATGATGGGAAAGAATTCGCCTTTGCATTTAAAGACA-------CACTTTCATACAACaata---ataactaatgtttata-----cagtgcttggtgtgtgtcaggcaatgGAAGTAACAGTCTAGTTTCATAAGACTGGGATTATAGGGCCATAAGATTT------TAGCAGGAAGTTTAGGG-----TGAC--------TGTGTTCTGTTGCAGATGAGCCACTTGCCTAAGGACATCATGGAT------------AGACTGTGCTCTAGGACCCCAGCTGTCTGCACCATGCTCTGCTGCTCTGTCTACTGCTAGAT---CTACCCATATG-CCTTTGCCGTGCAGAATGAATTTGCAGCCTCTCCTTCTATTGACCTGGTCTTTACTTTAGAATTTAGTCTTCACTTTAGAACGCAGAGGTAACAAACCATCAGCCCAGGCTCCTACAATAGCTTCACACTTGGCTAAACA----GCCTATGCAAAAGTTGTTCTTGCTTCCAGCTCCATCAGACTGCCTCTGTGGC-CACCT-CTGGTAAGCGCTAAACTACA-GGTCTGTGAAAAACACAAGCTTCTAAACCTCAGAGGCCTACAG s bosTau2.scaffold8338 3521 730 - 33504 GGGTTTTAGATTCAAGAACTACCATCACC----------ACCAACTACCCTCTTCCATCTAAAAAAGCTTTATTCATTTGTGCTAATTGAGAGGGCCAGTAGAATTTGGAGACTTCATTGCTTATGGTTATGTTCTGTTGTCTAGAACTTGAGTT-TAGGTTGTTGATTGTTACAAAGGGGAAGAAC---CATTAACATTTAAAGGCATGCATTGTGCCTTCACAAAACAGTAGTGATAGTTAATGCTTTTATAGTGTAGTGCTTGTGATGTGCCAGGCACTG---GTAAGAGCACAGCCTCTTAAGGCTGGCatcatagaatcctagaatcttagaactagaagggaccttagggatagctggctaagcctatatggcttagtgaaggtaagtcacttgcctgggg---tcatgcattttgttagtagcacaatcagcaccaagaccggaaccttctgaccacagacctagtactctgtcta---ctagatccaccacccctatgACCATTGGGGTAGGTAGAGACT---CACGTTCTCTTTTCATTGACTAGCTCTTTCCTTTTGAATTTGATTGTGTTTATA-CATTTAGAAGTAATGAACCCTTTGCCCAGGCTCCTGTGACAGTGCCACGCTTGGAGAAACAAATGATCTGTGAAAAGACAGT-----------------CCAAGCTACCTTTTCAGCTCATCTCCTTGTTTGCTGTGAAATACAGGGTCTGTGAAAAGCACCATTTTCTAAGCCACAGAGATCCATAG a score=15486 s mm7.chr15_random 3502373 698 + 7075849 AGGCACCTATGTAGGGG---------GGACAGTTGTATCATAGGACTGTGGCGGTGGCTTAGTTAATCACTTGGCTTGCTTCTCATTGTTGTGGGTAACCTTGAGAAGCAATTAATTCACCATGACAAGGTTCTAGAAATGTTTTTAAAAACACAATTGCAGTCATCCCTCTCAGAGTGTAAGTCCTTTAGAAGTCCTTTTGTATACGTCCTTTAGAACCAAggttagca-acattcttggtaaagggccagacaataaatgttttattggttaattttttccatctattggatctataatccagctactcatctctgaccattgtagaccataagcagccatagatc-acatgtgaacagctgtatgttactgctgttttaacaaaactttgtttacaaagaagaggcaagggccagatctgtcaaccaatgagctatagtttgtagacccatgCTGTAGAATGCTGGGAACCTGTCAGCTCTGAGTGCTCAAGTGGTGGTTTAGAAGAAGGCCTG----TCCCCTTGGTTTGCTCTTTTAACAGTCTGTTCATCTCTCAGCAATCTAATTAACA----TCTTCTTTTCCTGCTGAAAGACTC--ATTTCCTGGCAAATATTTAATTTAGCTTGCAAATGTCAACAAAGACTAAGTTGTTACACTGGCTAATGCAAATGCTAGACATTAAAGCAAGTCCAGGGGAGTTAGCCTTGGAT s bosTau2.scaffold8338 5021 621 - 33504 AGGCACTCTTGAAGGGGAAATTGAGGGGAAATTTGTGTCATCAGACATTGTCAGTGGCTTAGTTAATCACTTGGCTTGCTTCTCATTGTTGGGGATAACCTTGAGG---AATTAATCCACTATGGCAAAGTTCCAG-GACATTTTATAAAGCGCAATTATAATCATACCTTGTCAAGTACTG--TCTTGGGCA--------GAATTGATCCTTGAGAGCTTAggttagcagactttttctgaaaagggccagataatgaatattat-ttatttcattttt---acttgttgggtctgtattgcaactactcagctc-attcattgtaaagcaaaaatagtcattgatcaatatttaaataaatgtacat-----atgtttaaataaaactttatttacaaaa----------------------caagcagaggaccacattttgt------------cAGAACCCTA-------GTCAGC-CTGAACCTTTAGATAAT-GCACATCACCTGGCCTGCTGCTTCCTTTTGTTTGCTCCTCT-GTGGTGTCTGTATTCACTATTAACATTATTGATAATTTTTTTATTTTCCTGCTGAAAGTTTCCTGTGTCCTGGAAAATAGCTTG-TCAGTTCCCAAACA-CAACAAAGA--------------TGG--------------GGGTATTAGAACAAGTCCAGGGAGTTTAGCCTTAGAT a score=2202 s mm7.chr15_random 3503666 85 + 7075849 aagtattctaaattactgaactatctc-tccagctcATATTTT---CATGCTTTAAAAGAATAAAAATAACTCCATTACAAAGAAAAAA s bosTau2.scaffold8338 5720 87 - 33504 AAGCATTATAGAC--CTGACCCACATCCTAGAACTCAAATTCTGCTTATGTTTTAAAGTAATGACAATAACTCTGTCTTAAAGGGGAAA a score=11729 s mm7.chr15_random 3503755 674 + 7075849 ATTCAGTTATTCTCAAGAGCAATTATTTTCATGTAATTAAAGCAGAAACTCTC--ATCCAGTCCAACTTTCATCGGCTAGTTAATTGAAAAAA-------AAAGATGGTTTTTATATAGATCTAATTACATTTTATTTTGAGTTAA-ACATGGTAATGGGAGATCTGCTTGGTGAGATTTGGATGCAGTG-CAAAGCTTCCTTTTGTT----CTTTGGTTTTTACAAATTAGATCCCACTGGTTTGTTCATCCTTCAGATGTCAACTGTAGCCAAAGCTCAGTATCTGAGT-----------CCAGG-------GCCCTGTAGGAGAATTATGGCAAGTGTTCTGATGTAGGGGTCACCTTCATGGACTTACTTCAAAGCAGTTGTCTTAGCTTGTACAGAAACAAGTTTGGGCCTTTTGTTTTATTTCTAATAATACTTGTATTTCATCTGATTACAAAAGAAGACGTCATGTGATTAGAAAAGCAACCAGGGTAGTCAGGAGAGTAAGAGTAAGAGTAAGTTACTCTTACTGGAATAACACATGAGTGGAGATGAAACGGGAAGAAG---CTGAAGCACAGGAAACAAGTGGAAAACTGGGGTATTCTAGCCAGGCAGGGTCTCCAGAGGACATTGTCCCAGGTTGGTGTTAAGATCAGTATACTTGACACAGGACTGGATGCTGCTTGTTTATTCGGAGAATAGCTT s bosTau2.scaffold8338 5882 634 - 33504 ATACCATTGTTATCAAGAGTAACTATTCTCATGTAATTATGGTAGAAACTCTTTTATCCACTCTAATTTGGAGTGGTCAGTTAATAGGAAGAGTCAATTGGGGGATGATTTAAATATAGAT------ATATTTTATTTTCAGTTGAGAGATAGTAATGGGAGACTTATGTCATAATATTTGGATGTAAGGATAATGCTTCTTTTTTTTAAAACATGGGCTC--ACTAATTAGAGTTC------TTGGTCATCCGTCACGCTTAGACTGCGACAACAGGGCATTATCTGAGTGCCGAAAGTTTCCAGACATTTCAGTCTTTTAAAGTAGCT---GCAATTGTT---GCTTGGAAAGTACCATTACTGAGTTATCCCCAAGCAGTCAACCTAGTTTTTACAGAAACAACTTT----TTCTCGTTT-------------ATTTGTATTTCATCTATTTACAGAATGAAAGGTCATGTAATTAAAATAACAACT-----------GGGAGCAAT-------GCAGCTGACTCTTGGTAAATAAGCACAGCACT-CAGCTGTGTGGGGAATGGGTGCCCAAGGGCCATAAAGAGAGTGGAGCCCT-----------GCCAGCCCAAGCCTTCCAGGAGCACT------GGTGGCCATCAATATCAGAACCCTTGA---GGGAATGGAGGATGTTGGTTAATACAAGAAATAAGTT a score=58449 s mm7.chr15_random 3504829 2636 + 7075849 GACTT-CTTTTATCCCCAGTGATATAAAAAGCTGGGTGGCTTTGCTTTGATCTGCTAGAAATCAATTTCCCTTCCCT---GTTAACACCCAGGCTTTACTCAAGTACT--------------CTGTATACAAGCTTCTACCAATCTCTAATGAAATTGTTGACTGGTTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTGGAGTTTCAATCAATGAAACCCTTCTACAGA--GAGTAAGCCTCCAGCCTCTCCTAAAACTTGCATTTTTTCCGTAACAAAACACACATGAGCCAATTATAGGAATCAGTAAACTTAGAATTTTATATTTTTTAAAAAGCAAACATTTATACAGTTTTATTACATACAGAACAT-GTTTCACCAGGCTTGGTTTAATAATGCTTTTTGTTCCTCTTAACATCAGTTTGAAGCAGATATTCTCTCATGACCACCCTG------AAGAGCCTAAGTCAGAGAGAGGTGAGATAAGGAAGCCAGGGCTTGACCCCAGGCAGGCTGAGTAGCAGCTTTCTTCTAAGCCATGCCTCCTCTCTGCTTCCCCAGGACTTCAGGTGCATTCCATTGGAAGGGTT-GAGACATCACCCACAGGAGTGCTTTGATATTC-----CTTTACATCTTACAGTTCA-GCCAGTGAGCACAAATGGCAGGTTCTCAGCAGAGCATATTAGAAGACATCAGTCTTTGAAAGGCAATGTGAGTTCAACCTCTGAAGCTACCCAGTTCTTCAAGGAAGGAATGCATGCCTTGGTGGC-----------TAGAATATTCTATTCTACTCAGAGCTGAATGAGGGTATGTTAAGACTTAAGTTAATTGCTCACCCATCATTTCAAATTCTCCACATGCCATCCCCCAAACTCTGGCATACCTCCTTTCAATG-----ACAGTTGA---TGGAAAGCCCCTTCACTGGACTGGAT---TGAAGTGCATTGCTACTGGTAGCATCCTATTGCACTTCACATAAGTAACAAGACAAATAGGGAACAG--------CCTGTAGAAAGACTCTGTACCAATAAAACAAACACCAG--TGTGCATGTGCTC-------------CAATCTGAAGAGGCT---GAGGATTTGAACAGAGCAGATCTGGA-AGAACCTACCACAGGGGTCTGACCAGGCAGGGACTTGACGGCCATGTTCAATGGTATTCATGAGTTTTAGAGAAGAGCTTTTTATA-GGGCAATTTCTGTAACATTAGATATTGGCACATTATAATATTGATGATAGTGTACATTTGTAAAATACTTCAGAGCTTAAAAAGCTCTCATCTACCTACCCTGTCACTATTTGAATGGCCCATCATAGTAATAATAGACTT-AGAGTGAGACCTCTTTTTTGAATCATGTGTCTTGATTTCCtgacctt-gatcaaggtcctcaatctttctgagcctcagtcttcttttt-aacttataaactgaggaa-agccacttatcttttagggttctatgagTTG--TCATGTACCACTTGTGTTGTGCATGAAT-AGAATTTGACTGGAAGTAGACTGAATGCAAACCTCCTCTATGTA--------TGCAGAAAGGCTAAGAGACATGGCAGAAATGAGCCCTACATCACCCGACTCT-GACTAGTAGTCTT--------GTCACACATCACCAGGAGGTCTGAATGTTTTATTTAATGACTGATGTGGAAGAAGTCCCATCTAGTTGGAATGG-------------AGAAGGTAATGGATGCACGTTCTGAGACGA--TGGGGAAGTGAGCATCATTCAGGCCCTGAGTGTGAG----------CAATGGTGCATCAATATGGCTTTATTAATGGCTCATTCAAG---------TCATTGATTTGTCCAGTGCTTGtttacttagcaagtagcatatgccaggcattgtgcttactgatggaaataaagtgaataagGTGTGCAATGATTTCTCTAAAACTCATTAGCACGCCAGAAAATTCCAAAGATATAGCAGTTCCTATTGGAACTAGAAATTACTTATTTTGTAATTTAACTCTATTAGATCTAAATCATCTGATTACAGATTATGGAGCTAATTATAAAGCTGAAAGGTACGTTACAAACTGCTTTTCAGTCTAATTTCTCATTATAGATCTTTATTAATATAGTTTTGCATAAATGAAAATTCACCGCACAGGTTAGATGGTCTACAGATTTCACA--AAACTGTGAAAGATAAAGGGGCTTGAATACATAGAGAGGCTCTTTTATTGTGCTATACAATTTTCTTGACATCATCTGGCGCTTCCAATATAATTAGTAAAATAGCTGTAACTTT----GGTCAC------------TTTCAAAAATGGGAGATGAATTAAAAAAACCCACATTGACGAGCAAGAAAAGCTCTCCACTTTGGTATAATCTATTATGCACAGTTCTATTTCCTTC-----------TGGAAAACTCTCATCTCACAATTATACTTCACCTAGGAAAGCCAAGCTTTCTAATATCACATAGTCGGGTTGAATAGCTCTCCTTTGAGAGCTGAGAGTGGGGTTTTGAATTCTGGAAGCCATGGTTTCAAAGTCAAGAAGATAA-------------------GGAGAAGA----CATTTTAGTTCCACAATGAAGCTCAGGGAAAGTGTAAATTTTCTCATGGCAAAACCCTCTCGGATCATAACAAAGCAAAAGACGGCAAGCATTGGC-----TTTCCCTTACAAGTTACACAAAC------TCTAAACAATATTAAATTGACCAAATTGTTGAAC s bosTau2.scaffold8338 6517 2613 - 33504 GACTTGCTTTTGCTCAAAGTACTTTAAAAAGTTG-----TTTTGTTTGGGTTTGTTAAAA--CAAGGTTCCTGCCCTCTTGTTCATACTCATATTTTGCATAGGTAATTTCTTCAAAGTAGACTGTACACAAGCTTCTGCCAAACCCTGATGAAATTGTCAGCTAACTTG-----------------------------------------GCCT-TGGTGAAGTTCAAATCAATGAAATTAATCAATGAGCTGAGTACCCTTCCAATCGGCCATGAACCT---GTGTCTTCTGTAAAAAAAAAAAAA-------AATGCAGTGATTAGTAAATT----ATTTCAGAATCAAAAAAACTTAaacacgtata--gctttactacatgccaagtattatttcaagtgtttagaaataaca--gacttttattcct---aacatgccttagatgtaggtcttatcccatggccattttgcagatgaagagacagaggcagaaagttgagtggcaaaa----ctgggctttgagcatggcaggctggg------ctttcttcctaaccttgtcct---tctgcctctccagggctgAAGTTGTCCTGCAGAGAATGGGTTTGAAACTTGACCCAAATGAGTACTCTGACAGTCAGATCCTTTATGTCTTATAATTCACTCCAATAAGCACAAATGATAGGTTCTCAGTAAAGTGTATCATGAGGTATCAGCCTG-GAGGTGTAAGACAAGCTCAACTTCCCAAA-TCCCTAGTTCCTCAAGGAGGATTTGTTGGCCATGGTAGACTTCGAGTCCATAGGAGGTCCTGCTAGGCATGGCCCTGAGTAGGACTTGACCAAGGCTC---TTTAATCCTTAGCCATGGA---------------------CCCTGAAACTCCAACATACTTGGCTTTTATGGTTATAAAATTGGCATTAGAAAGCCAGATTGCTGGACTGAATATCTGAGTGTAATTACCACCAGCACCATCTTGCTCTGCTTTACCCAGATTATAA----AATTGTGAGCAGACATAACTCCTGGGTAGTGACTTGGCACATATGAAATGATGACCAACATATGAACATGCTCAGACAGTCATGTCCGATCTAAACAGACCCAGAAGGGGCTGAACACAGCAGGTGTGACCAGAGCCTACCACAGAGATCAGGCACAATAAGGACTCCACCTACATAT-AAGTGGTTTTTGTTGTCTTCAAACAAGAAGTATCTATGCAGGCAATGATAGAAGTATTGGAGACTG-------------CAGATGATA----------------TAGTT-------------ACTCTTGTCTAT----------ATCATCAGCATTGC------TACTGGTGATTgattttggagtcagagctattgtgc-aatcctgcctgttagatttgtgactttaggccgagttccttaatttttctgaaggtcagtttttttttttaatatgtaaaatttggattcatcttttaccttttggagtttcctgagttaaattttgtaatgtctaggttgtgcctagctcagagcttagtttgcagGAGTTTCAGTG---ATGTTCTTTACATAGCTCTTTGCACAGAAAGAATCATGGAA--GGCTGAACCTAACCCTACATTTTCTGACTTTAGATCAAGTGTCTTTGCTCTTTATCACACATTCTTTGAAGGCAGGCATATTT-ATGTAATGAACTGTAAGGCA-AGGAACCATCCAGTCGGAATGTGCATCAACTGATCAGAAGAAGTTGGATTGGTGCTCTGAACTGAGACACAGAAGTGAACGTCGTTCATGTCCTGATTGGGGGTGGACGGGAACAATGACGAATGAACCTGTATTTGCTAATCACTTATTTGTGATTACATATTCCtttatttgttcagcagttgtttatttagcaaaaactatgtgccaggtagtgtgctaactgttgggaataaagtgaatgagaaatagaaacatttcTCTAAAACTCATTAACACTCTGCAAAATTCCAAAGGTATAATGATTCCTGTTGGAAATAGAAATTACTTAGTTGGTAATTTAACTGTGTTAGATTTAAATCATCTGATTACAGATTACAGAACTAATTATAAAGCTGAAAGGTACATTATGAACTGCTTTTTCATATAATTTCTTAATATAGACCATTATTAATGTATTTTTATTTAAACCGGAATTCACTGTGCAGGTTAGATGGTCTAGAGATTTAAAAAGAAACTGTTAAAGATAAAAAGGCTTAAATGTATGGTAAGGCTGTTTTATTATATTACTTAATTTTCTTGACATCTTCTGGCACttttaatataattaataaaataGCTGTAGGCTTCTGAGGTTATGAAAGAAAGTAATTTTGAAAAC----GATAAAATGAAGAAA---ACATTACTGGGAAGGAAAGGACCTCCAGTTTAATAGTATTTATTATGCATTTTACTATTTTCATCTTCTGATCAAATAGAAAGCCCTCATTTTGCAACTGGACTTTAACCAG--------------------------AGTCTGATTGAGGAGTCCACATTTAAGA-TTGAGAGTGGAGTTTTCAGTTCCTGAGAC--TGATCCACAAGTTGAGAAAATACAGGGCTCCTATTAATTCTTGGAGAGGAATAGTAGTTTTGTTACAGAATGAAGCTTC-AGACAATCTAAATGCT-----------AATTTTTCAGACTATAAGAAGGAAAACGATGACAAACATTTGCTTTTATTTTCCTTATAAGTTACATAATTCCATTGTCTAGACAGTACTAAATTAACCATATTGTTGAGC a score=9567 s mm7.chr15_random 3507886 400 + 7075849 TCAACTGTGCTCCAGTAGAACTTTCCCTATTCTATTTTC----ACGGGCATTTGTAGA------TTTTTGTGGATTTGATCTTAAACTCATTGTAAGCATGGACCATATTTTCTTA-ATAACTCCATATAAAAATGGTAGAAGAAGTGTGGTAAATGTA----TACATGCATATGTGTACAT---------TCTTTTGCTCTCAGTACCTGTTAGGTGGTGCTACCCAAGGTCATACTGCAGCCTGGGATTAAGGACAAGGCAGTTTTCTG-TTCTCTGACTCCTGTACCACCATCAGC-TCTCTGGTCAGCTGGCTTCTGTCACCTGTGCTGTCCCTTGCAGTTTCTACTCCTGAGTAGGGACAGGAGAAGAAGCTGCCTACCAAAGAGGAC-TGCAGTCTCCAG--GCTGTGTGGCCGATCCCCTTT s bosTau2.scaffold8338 11362 418 - 33504 TTAAGTATGTTCTTTTAACACTTCCCTTGGTCTGTCTTGTGTGACAGAGATGCATGGACAGGTCTTTCTCTGGATTAGACTATAGGTTCCTTTGGGGCATAAATCCTGTTTTATTCCATTGCTTCAAATGCT--TGGTGGAGTAAGGCAGGTAGATATGAAGGTACATGCGCACACCTCCATAGACACATGCCTTTCACTTTCAGTCCAGGTTGGCCAACTTTGCCAAACATCACACTGAAGTCTGGGTTTCAGGAGGAGGTGGTTTTCTACTTTTCTGCTCAATGCACCACCATCAGCTTCTCTACTTAGTGGACTTCTGGCATCTG----GCCACTTGCAGTGTCTGCTCCTGAG-AGGGACAGGAGAGGTTGCTG---ACCGATGAGGATGGGTAGTCTCCAGCAGCC-TGTGGCAGGTTCCTTTT a score=4764 s mm7.chr15_random 3508329 395 + 7075849 AATATAAGTTGCTCAATGCATGTTTCACGACAAGACAAATACAATTCAATAATCTTTGGGCACATTGCCCAGGAACCTGACCCTTTACCTTGTCTTCCAAGGATCATTGATAATCAAGAGGTGATAATAGCCTTTGGCCTTGCTTGGCTAGAACTGAAGATAGGAGGTGACTCTCTGA-TGCTCTCAACTGATGTTCAGAGTTGCCGTTCATTAATCTAGACAAACTGGGATAGACTGAAGAAGAAAGCCCACAGTGtttttttgtttttttgtttctgtttttttttttctCACTTTCAAAGTCATAGTCTTATAAC----AGGAGT-TTTTTCAGATTTCTGTCACACACTGAAATCCTATGA---GAAGCAATAGTAGGGCAGGTGGCTCTGGTCCCATCC s bosTau2.scaffold8338 12745 339 - 33504 AAGATGGTTTGCCTCATTCAGGGGACATGACCAGGAGAGTGTGATT-AACCTTCTGGGGACACAT----------CTTATCTCCATAAACCGTATACCAAGGGTTGCTAATAGACAGGAGGCCACAA-AATCTTCAGCTTTGTGTGTTCAGAACTGGAAAGAGGAAGCCACTCTTTAAGCATTTTCATTTGCACTTTAGTGGTGCCG---------------------------GCTGAAGAAGGGAA--------------------------TTCCAACTGACCCTCTCTCACTTCCAGAGAGATACTCTCGTGTTCCTGAGGATCACCTTTGAGGTTTCCATGGTACACCAGAGCTCCATGATGAGAAATAACAGCAGGAGAGGTGGCCCTGGCATCCTCC a score=19868 s mm7.chr15_random 3509116 670 + 7075849 AATAGTGATTCATTACAAAAAAAGATAAGTGACCCTTCTCTTCTCCTTCCCTCCAGAGCAGAAACAGACCACGTTCTTAGTTGAGTCCTTCCTTTAAAAAATTTTATCAAATTACTTGCCTCAACAATTTCATGCACAGTCAGTTTGTAAGTTAATTATGTACTGACTTTAACAA------TGCCTTTTCTTTTATCTGTTTGAAATGACTTGCTGTTGGATTTCATTGAGTGCCCCTTTGTTCTTAGAGTGACTGATTTCAGGTTTGTTTGAAGAATGGCTTTGTTGAGTCGTCTATGTTTGTTGCCACTGCTTAAGTAGAACGTCTGGAAGGAAAATCTTGAACAA--CAGCTGCACAGTTGTGGGTCTCTTGCAAGTACAAGCAACCTCAAAGTTTCCTTTCATCTTCTAAGTGCTGAAATTCTTCCCATTTGTTAGGCA-TAGAGATGCCCCTGTGTGCTGCTGTGTGCAAACTGGGCACCCAGAGTTAGTGAATGGATGATTATTCCCATACTAAAATCATACAGAGGCAGCAGGCATATTAA----ATAGTTGCCACACAGGCATGTGTAGACAATTTAGCTACATCATGCAAAGGCAAATGT--------------TCTTGTATATAGGTATGTGTAGGCGGATTGGCTGGCACTGAGATGGGGGAAGGAAGGATTAATCA--AAGAACTTT s bosTau2.scaffold8338 13197 672 - 33504 AGTAGTAATTCATTCTAAACAAAGA--ATGAATCTATCTCCTCTTTTCCACCCACAAGC---------TTATATTCTTAGTCAAATTCTTT-TCTAAAATACTATAGCTAATAACT-GCTTTAACAATTTCCTGCACAGCAAATTT-----TTAATTATGTAGCGGACTGAAAAAAAAAAAGGCAGCATTTTCTATCTGTTTTAAACGAGTTGCCTTTCGATTTCATTGACTGCCCCTTTGTTCTTACAG-GGCAAA----GAGTTTGTTTGAAGAGTGGGTTTGTCATGTTTCATGTGACTGTCTCCATGGCTTAAACAAAAAGTCTACCAGAAAAACCTTGAGAAATTCAGCTTCTTAGTTGTGAATCTCCCGCAGGAGCAGGCAACCTCATAGTTTGCTTTTATCTCTCAGATTCTGCAGTCCATCCCATTTATAAACCACTCGTGTCCCCTCATTTTGCTGTTCAACAGTAACCAAGTACCCACAGTCATTGAGTTAATTATTATTCCTATGTCAAAGCTACATAAAGATTCCAGACATACGGAGAGGACCGTGCTCACATGTACATGTATAGACAATTTCAGTCCACTTTGCAAAGGCATGTGTTGATATTAGGAAAATTTTGTATATA--CATGTGTAAGCAGGTTGGCCAGGGCTGGGA--GGGCGAGCAGTGATTAATCAAGAAGAACATT a score=13378 s mm7.chr15_random 3511055 1083 + 7075849 GTTTCCCTTTCCTAGCTCCTAAAA--------GTGTCTTCAAATGTAGTTCTTCA-GATACAA--GCTGGAGCTGTTAGTTTTATTGAATTATTTCCTAAGCGCAGCGATTATATAAGAATTGCAAAAAAAGCTAACATTACTTTTG-AATTTTTTTTTATTTTGATGTCTCAAGAATATAATCTAGATGCTT-GGTGACC-CACATGTGATTCC-ATTTAGGGAGCCATTT-TAGCCA------CATAGCCCTCCTTCAGCAT---GAGAGAAAAGTTGGTCCTGACACTGG-AGAGACGCGTGGGAACTGAGA-CTGCTGAGGAGCAGTGGGGCCAGGACTTCTACGTCACACTCACTCAGGGTGTTTGCCCACTCTGCAACTTCCATATTGATCTTTCTTCCTTTTAAAAGTTTACTCCatcagccacc-----tgctgccccaaagcaaagcacgcc-aaactcaggaacctaagagatcagtcattccttcttgctcatggtccatcaggttggctggg----------gtcaggctgagct------aggctagattccttctggAACTGACCTCTTGTAACAGTTCATGCACAGATCTATTTCACAT---TCCTGGACC----CAGGCTCAAAG---------------AATAGCAGCACAGGAGGCAAGCTCATGTGTGTGAGGGTATTTCAAACATCTTACCACAACACACTCACTAATATCTCATTCCTTAAAGCAAATACTACTGTCAAATGTAAAAACAAGAAGTGActatctatctatctatctatctatctatctatctatctatctatctatctatccatcACTTACCATGAGGCCAAA-CAAATTATACAGACAAACCAAATATCAGTGTTGAAGAGA---------AGTA-TATTTCTATTCAGGGATAGGAGGAATAAAATTTTTCGATTAATCATT--TCTTCTACTACCATTGCCAAGTGCATGCAGATGAGGTTCTTTTA--------------GTGCAAACCAACTCTTCAG--TGAACA---------------ACCTTGGTGAGGGGATGTGGAAGATGATGCTCAGAGACAATGCTGCCCTATTAGA--TGTCTATACTGTGAGAAGAGAT--GAGAGGCAACAGGTTTCTTAGGCTTGTCTCAGTTCTACCCATA--------ATTCCCCTCCCTTGCAAGGAA s bosTau2.scaffold8338 14101 1133 - 33504 GTTTTTCCTTATCAACCCCAAAGACACCTTTGGGGACTTCATGCATGGTTCCTCAAGATATAAATGGTGGAGTTATAGGTTTTATGGGGTTATTGCCTGATGTCAGTGCATCTTACCAAATTACCCAAGAAACCAACATTATCCTTGCAAGTCTTTATTATTCT--TCTTCATAAAGTATAGTGTATAAGCTTTGATGTCTACACATGTGACTCCCATTTAGGGAGCCATTTGTAGGAAGGTATTAATATTTCTCGGTAAGCATTCTGTGGG----GTTGATATGCACGCTGGGAGATACATGTGGAAATGGATATCTATTAAGGAAAAGTAGATTCCAGACCCTGGTCTCAGGCTCACTCCAGGTGCACACTCATTAGGAACCCTTCATATTGATGTTTCTTTCATTTTCCTTATTACTCCATCTGTcagctataatgttactagatagcaaaccactccaaaactcaatgatttataagagctattatttatccttactcatgtccctgcagcttggctggggctagacCCTGTCTGGCAGTGCTGTTTCAAGGTACAGGTTTTTCTGGGCTTGA---CTCATAACATTTTAGACTCAGGTCAGCCCCACATTTGTCTTATGTCTTTTCTGGTTGAAGGGGCTGTCATGACGATAACAGAGGCACAAGGGGCAAGC-CAAGTGCAC-AGACCATATCAGACCTCTTA------------TAATACTGTGTCTGCTGTTGAAGTAA----TACTGCTAAGCTTAAAGACAAGGAGCAG--------------------------------------GTCAACAGATACACTC--TACTTACCCTGAAgccaaagcaaggcacatggccatacc------cagtgtcaaagggatggggacatagtactctttccatgtTGGAGTATGGGGAGGTTGACTATTT--TTTATCAGTAGTCTAATAGTCTGATTGCCAAGTAC--GTATGTTAAATTCCTATAAATAAAATACATATGTGTGATGAGACTCTACAGTATAAACATGAAAGCTCCAATGCACCTCTACAAGGGCCATCCTGAAATGACACATAGAGAATGAGTCTCCCACACAGAACCATTTCCATTATTAAGAGAGATAAGAAAGGCTGAAGGTTTTACAGGTTTGTCTCGGGTCTAGCTATGATTCTTCTATTCCGCTCCCTTTCAAGAAA a score=20100 s mm7.chr15_random 3565185 457 + 7075849 TAAAAGCAGCTATAATATCGCACTGCCTGCTAAA--GCAGCTAAAGAAGTGGACAGGGCTATGG-AATGATCAAACTAAAAATATTCGAAAAGAAATAGAGAATGCTATCAGAAGTATGTTGACTTCCCTA--------------AAATTCTTCTGGATTAATACTTGTTAATATTTCTTA-GACCTACTAATGTAAACATTTACACTTAAGTGAAGTGCCTACCTCTTTTTTGGCCATCTCCTGCAACCGTCTAGGAAGGCGTTTGACATTGTGGCTCATGGCTCTACGTCGCATGTGCCTTGGAAGAGTCTGGAAAACCAGTGAGTTAGATGACTTCTGGGTCACAGCTTTTAACATGGCACTGATTTCAGCGGCTCGTGCTTGAGCAAAAGTAGAAGCTGTTGAAGGAAATGGCAAACAGTAGGGTGACTGAAAGCAAGTCTTGAGTCAGCAGTCTCTCTGCTGGGGTTCAG s bosTau2.chr14 39630084 446 + 50711261 TAAAAGTAGCTATAATATCCAGCAGCCTGCTAATTTGGGGGGTATGGGGTGAAGGGGGGAAAGGTAATGATAAACCAAAAAATATGCAAAATGA--------------------GTATGTTG--TTTCTTAGTTTTCATTTTAATAAATTCTATCAGGCTAATACTTCTCAATTTCTTTAAAGAACTACTAACCTAAACATTTACA-TTAAGGGATTCTCATACCTCTTTCTGGGCAATCTCCCGTAACCGCCGAGGAAGGCGTTTGACATTGTGGCTCATGGCTCTTCGTCTCATGTGCCGTGGCAGAGTCTGGAAAACCAGCGAATTAGAAGATGTCTGGGTCACTGCTTTCAACATGGCACTGATTTCAGCAGCTCGGGCTTGAGCAAAAGTAGAAGCTGTTGAAGGAAATAGCA------ATGCCATTTAAAAACTCATCTTGAATCAATACTTTTCCTGGTAGATTTCAG a score=3877 s mm7.chr15_random 3565659 242 + 7075849 ACAAGTCAGACACTA---GGACCCCTATGAGGGAAGTACCAACACTGGTCATTTCTGTGTCCCTATCCCTGGAGAAGATACTTCAATGTTAACATGCTTCCATGTTTTCTAAAAGAATTCCA------TTTTCTAATTAGAAAAAAATTCAAGCTTCCTAAATCTTCTAGTTAGTAAAAAGGATTAGCCAACTTTAGGAGTTTTGATGTAAACATACTATACAGTCATGTAACATATTCACAACTGTTGTT s bosTau2.chr14 39630554 218 + 50711261 ACAATTCATCCACTACCCTAACCCCTAATAGATTAATACCAATAGTAGTTATTTCTGTATTACATGACTGGGAAACTGTCCTTCAACTT--ATAT-TTTTCAAGTTTTTTGCAAGGATTCAGTTCTACTTTCCTAATCAGAAAAAAA---------------------AGTT--TAAAAAATA------AGCTTAAAAGGTTTTATTTTTAAAACAGAAGGCTA-CATGCAATATAATCACAACTGTTCTT a score=14461 s mm7.chr15_random 3568028 313 + 7075849 CTTCCTGACAAATACCTACCAGTTATATACTTGGGGATCTCCTGAGAAGTGCCCTCAGGACCTGCTTTCCAGCCTCCCTTTTTCTTAAACATGGTTTTGGAGGAAGATTGCTCATTCACATCAGACTCAGGAAGCAAGTGGGGACTCATCTTGATTTGCCACTGCCTTGAGGTTCCAGAATGAAGCTCTAGTACATTTTCAAAAACAAAACAAAAAGAAAGACATCACCGTATCATACCAGAGATA--------------GGCTTACAGCACAGA-----ATTAACTTAACTCTAGAGCCAACCTGTGA----GTTATTACCTGTCTACCTGCGca s bosTau2.chr14 39631661 328 + 50711261 CTTCCGTACAAACACCTACCGGTTATATACTTGGGAATCTCCTGAGAAGTGCCCTCGGGACCTGCTTTCCATCCTCCCTTTTTTCTAAAGGTTACCCTGGAGGAAGGCTGCTCCTTTACATCAGACTCGGCCAGCGGACGGTGGGTCGTTCTGGTCTGCCGCTGTCGGGAAGTTCCAGGATGAGACTCTAGTATGTTTTCAAAAAGAAAACAAGAAGAAACAGGTCACTTT----TATCAGAGATAAGGATGAGAGTGTTGGGTGACAACACTGATGGGGATt---ttagtcctgtaacccccctgtaaggtggctatt-cctgtcctcccctgca a score=24484 s mm7.chr15_random 3620537 1561 + 7075849 AAAGAAGTCTTACCTAGTGTAGATTCCTCTGCTTATTTGCCATACAACTTCGAAGAAGTTATCTTCCTACCTAAAGCTTTCATCCATTATATCTATAATTTGAAAATAATAACATTCTTTTGTCACTGTTGTAAGGGTTAATCTAGTTTacacacacacacacacacacacacaccaccaccaccaccaccaccaccaccacgaccaccacgatgaccacgaccggtaccatgaccaccaccaaactgccaccatcaccatc----atcaccaGTAAATCTCTTCTGAATATATATGTTTCCTCAGTGATATGGTTGGGGTGGTGGCTACAGATATGGGAGCACAAG-GTAGGAGTTT-------TCTTTGGGTATCATATCCCCAGTACTCAAGTCTCACTCATCT-CTTTCTGGACTAGAATCTAGGACCTCAAACATTCTAGATAACTACTCTACCACTAAGCCTCTCAATCTAGTCTCTGAAAGAATTTT--------TTGGAAGAGATTTGCATTTAAAGTCTCCCCAAGCAGCTCAAATTATAACA-TAGTAGAGGTTACTAGAGTGTCTATTctctgttaagtactcttcatacattatctaagatcctgcagagaactc---atggtatgtatgagtaagaaccacaacttacagaagaagatgcggctccaagaCCTTGTA----------AAATTCATCTTGTTAACTAATGGCACACCATGAAAGGATTTAAGCA-----CTGTCTGTTCCTTTCAGCCTCCTAGTTTACTAGGAAGCCATGCTACTTCTTTCCATATTTAACTGCATGTTTTCATTACACAACTTTTTGTTGGAATTAAATGAACAGACAGCATTCTGTGG-GAACACCACAAAACCCTCTGTGTTACCTCATCACCAAAGTTCTCATAACCTCACGTT--------------CATTTCCCACAAGAACACATATAATTTTTTTTTCTTGTGACCCAAACAACTTCCTTGTCTTGAGGTTATCAACTGCTAATGTGAACTAGG-----GATGAAATGACCATTAGggctgagcttctttgctgctgtgtgacctctggatggtcacacaacccttgtgactcagtgtttttatctaaaacttggggCTCTGGTTTCTTGCGTTTAACCTCTTTCTCAAGAAAGTTAAAAGGTTGGAGTTTACAAAGTGCTTCATTTTGTCCTGGCACCCCCAAGTC------ACAGGATCCCTTAGCTTCCTCTC-ATGTCACAATTATAATATGACTTGTTATAAGTCATAAGATAGAGGAAGACCATATGAGCTTGACCAACGTGAGCTAGGCTAGTTTTCTATAGTTTCTTTAAAGCCCAAGCTTCTATAATTCACACATCTTGCTATTGACTACATTTCTAAGC-TTGTGTGGGTATCTAGGGATCAAAATGAAAAGGTTACATGACTTGGTGTTTTAGATCATTCTGAAATA--------ATAATGGTTAATATTTTCACATGTGTGCTATATGCCAGAAGGCATGTTTAATATACAGCAAGAATGACTTCACTGAATATTTGAA-------AGAATGCATGTATTGTAGGAATGGGGTCCATAGAAAT----TCATGCCACTTGAATGTAACAAGTCATG s bosTau2.chr14 44294217 1431 - 50711261 AAAGAGGCCTTacctggc--caattcctctgctta----ctatctgactttggagaagtgggttctctgctccaggcttctgttctttaaatgtttaaggtgcaaatgataatatttatttagtagatctgtgaggatta-----------------------------------------------------------------------tatga--atgaatgGT----------TCATTCAATTCATACCTTCAACTTATGCAATAAGTAACAAATATTTATTGACT------GCTTCCTAGGCATGGTACCTGGGGAGGAGGTTACAAATGTGAAGGCACACTTGTAGGGTTctagaacagttcctgg----cacatagctggtgctcca----caaatatttACTTCCTGGAC---------GTAC---------------TAACT-CCCTAACACTAACACTC---ATC-AGTCTTTTCAAGCACTTTCCACCTCCTTCTAAAGAGTTTACATTTACAGGTGTCCTAA-CACCCCCAATCACAGCaatagtagctatttttagagcccctattatgtgtcaagggttctagatatatcatccaagattctactgacaaccccataagggaggcattaccgttactgccatcctacagatgaagatgaagctctaagagcatgcaggatggggccaaatccatcc----atccagtgccaggcagtgtggggattgaggcagagctctgtctaatgataac-tcttccctatttcctctgagcccacactgcTTTCCGAGTTGCTTCCTCGCCTATTCTCATTACAAGGCTTTTC--TGGAATGAAA------GCAAATGTTCAATAAAGAACAACCCAGAA-------TGTTCCCTTACTGCTCTGGTTCTCATAACCTCATGTTTATCTCCTCACATTCGTTTCCCACAAGAACA-------------TTATTTGTGACCCAAACAACTTCCTCGTCTTGAGATTGTCAACTGATAG-GTGGAGGAGGTTCTCTAGGAActggccctcctggctga------------ctgtgtgaccttttgctggtcaccttacc---atgactcagtttcttcatttagaaactggggCTCTGAGTCCTTGCTCCACACCTGTTTCTCAAGGAAGTTGTGGCGGTGAAGTTCGCAGGGTGTTTTGTTTTGTCTTGG-GCCCGTCAGTCAGGTAAACAGAGCCCTCTGGCTTCTACCCTGAGTGACAGTGATG--TTGACCTACTGT-GGTTAAAag----------------tgagttggagcaa-atga-----------tccctgaggttccttccaagcccaggcttctatgactcACACATTGAATCACTGATGGTCTTTAAAACTATTCTGTGGGTGTCTGGAAAGCAAAAGAAAGAGGTGACTTTACTTATATTTTTAGATGAAGCCAAAGTATAATAGCCAGAGTGGTaaatatttctagttacttactatgtgtcaggcaccatgttcaatgattaccaagagtcacttcattgaaggtttgcaacaattcagattgtatggatcagggaacagaggcccagaaagattaggtcacgcaact---aactactaagtcatg a score=6571 s mm7.chr15_random 3622128 353 + 7075849 ATCTCTACAAAGGTCCCTTCCCCCAAACCATGTCACATAGAGTAGTTCTGAGGATCAGGACATAAGCATATCTGTTTGAGG-CTTCCATCTCACCATCCTATCTGTTTTGCCATCCATCCTTTGTAGAGTGTTTTGAACAGCATGCATACT-GTTTGAAACAAGCCTTCCACCAGCCCATCAAGGAGCCATGGTGGATATTGGTG-GTCCACTTGGCAATGAAGGAGAGTGAGGTGAGGCTCAAGGTCAA---------TAAACCTCTTGACCTGAAATAGG--------------------------------TTTAGGTTGTGATGGTTTAAGAGGAACA--GAGATGAATATGGGTAAGCTCACAAA--------AGGAAGACAAGCAAACTTTAATTGTGGTT s bosTau2.chr14 44298054 396 - 50711261 atctctgcaaaa--tcttttctccaaacaaggtcacatttactgattctggggattaggacacg------tctttttgggatcCACCATGCACCCATTAAAAGTACTTAGCACATCATCCATTACAAATTGCTTCTTTATACACACATGCTTGTTTATAACTAACCTCACAGCAGCCCACGAAGCAGTGAAGGTCGATACTTGTGCCCCCACTTGTCAGTTAAGGGAAGAGAAGGGAAGCCCTAGGTTGGGTTGCTGGTTAGGTCTCCTGACGTCATCCAGGGCTTGGAGGTCAAGTCCCTGGTTAACCTCATCTTCAGGCTGTAAAG---TGGGAGGGACATGAAGATAAACATTCATGAGCTTACAAATCTCTGGGGGAATGACAGGTAGTACTTAATTACAGTT a score=16320 s mm7.chr15_random 3683494 530 + 7075849 CCTCTTATACATCTAAGTGTGCAAATTTGGGGAGAATAACTCCTGTATTACTAGCAATAACAAAACAACTGTAGCTCAGGGATTTTTTTTAATTTTAATTACTTTACTGCTCTGGGTTCTTATCTTAAAAAACAAAGCAGCTT------------------------------------TCCACCAATAACCCCAGACTTATTGGAAATATTTACTCTTCAGATTTATGAGGTTTGAGGCAAAGG-GTTAAATGTTCTTTGTCCA-GGTTAGAAAGTGTGCCCCTGTTGATATCCCATTACACAATGATCCTGATGAGAGTTCGTGCACTGCAAAATATTACTTCAGTTTAATTGTAGGAGAAAGCATGTCCAAACATATGAAAATACTTATTTTACTTGGtcagaaaatagaaatgatgtaattcaacatagttccctctttttcttagcttcctggaCCAAGATAAGCAAAAA----TAAAACAACTGAAAAAGCCTTGCTATCTTGCTAGACCATGTTTCTAAGGAAAGAA-TTCTTAAATGTATTAGTCATCACACACAAGACACTTTA s bosTau2.chr14 363825 560 - 50711261 CTTCCTGCACAGCTGAATTTGCAGCCCTTGGGAAAGCAGTTTACTTGTCACTGATAACAAAGAGACACTGATAGCTCGCCGCTTTTC----ATTTCTTTCTTTTTACTACTCCAGGTTCTCATCTTCAAAAGCAAAGCATTTTaataagtgcataataatatagtgcacataataagtgcacataaataagtgcaGCTTCACCAGAATTATTtgccctcaggatttatgaggatttaataaaagatattgaacagtatttctgtactgttagcaaatgtgcagtttttgtccattcattactccatatgctgtaggagggcacattca--gcaaaatattgcttggatttcattgtaggaaaaagcttgtctctgtatatgaaaatacatgctttacttggtcaagaaatagaaatgatgtaagccaacatatttcccttgttgtcttagcttcttggaCCAAGATAAGGGAAAAACATAAAAATAACTG-------CTATCTAGCCTGCTAAAATGTATTTCCAAGGAAAGGCTTTCTGAAGAGTATTAGTCACTGAGTGCAAAGGACTGTA a score=13080 s mm7.chr15_random 3685419 604 + 7075849 AGACTGCACTAGAGGAAGGGATATTAG-AATGGTCTCAACCCACTAGACTTTG---------ATTAAGAGGCCGTATTGAACAACTATGCAAGAACCTGAAAAATA----TCACGGCCCGCA-TCTTACCTCATTGATTTCTGTCCCGTCTGCACTGGTATACACAATTCTGTAACCACTGATCTTTCCCGATGCGGGGTCCCAGGTTAACCGAGCGCTGTTAGAGCCAACATTGGAGATCCGCAAATTTCTTGGTGGGGTTAAGGGTACT--------AAGGAAACAGAGCATAGTGAAAACATTAAACAATTAAAAACTCATCTAAAGTCAGTGAAACACAAGAAACAGCTCCCTTGACATTCAGAGTCCTTCTCATAGACGGTATAATCTCAAAATACGTGATGAATCCTCTCGTAAAAATCAACAAAGTTGCCTAATTAACAGAGACGCTC--TTCTCCTTGTAGAGAACGACGGGCAGCAGGAAGTTATACTTGCTTAGAAGGAAGCAGGATCTGAGTAACGCACTCTGTCTTTTT---------GCATAG-----------TGCGTGTTGCGAATAAGAAACCAGTGACTCAAAAACAAGACA--CTAAAACTAAGTCTGAGCTCGTCCACTCAATGGCTGTGTG s bosTau2.chr14 364992 629 - 50711261 agatggcaagagaaaatgaataactagcaactgtttcaagccactgtgttttgggatgatcgatttcatagccctaagaaactaaaacCCAACCACTGGAAAAACACACTTCACATTCCACAGTCTTACCTCATTGATTTCAGTCCCATCAGCGTTGTTATATATAATTCGATAACCATTGATCTTTGTTGAAGTGGCATCCCAGGCTAACCGAGCACTGTTAGAGCCAATATTGGAGATTCTCAGGTTTCTGGGTGGGCTTAAGGGTACTTTGCAGTAAATGGAATAAAAAAGAAACGAAATTTTAAATAAC-----ATATATGTAAA---AAGGACCCGCAAAACACAGCATCTTTGACTCCTAAA---CTACTGACATATG--AAAATTTTCACTCAGATAATAA-----CTTGTAACAGAGAACA---TTAACAAATTAACAGAGAAAAAAAGTTTCCCTGATGGAGAATGACGAGTAGCCATGAATTGCAGACACTTAGAAGCAAACGCAGTGTAGGTGA-GTTTTCTGTGTCTTTCTTCTCCAGTCAAAGCTATCATTTCCTGCTTATATAAATGAACAACCCAATGAATCAAAAACCAGGAAACTTGAAATTAAATTTTAGCTATTGTACTCAAAAATTATCTG a score=4681 s mm7.chr15_random 3739822 351 + 7075849 actgttttgattaa--gaaacaagtcactaggtccagaccattctcaaggACTGA--------CTAGCCTGTGGACACTATTGGGGGGTGGGGGTGAGGCGTTCACTGAGAGTCGTATCAGAAAATGCAGTTGTCAAATGATAATTTCTACtttgtggtgctgaggattgactcagggcctcatgcactctaggcaagtgttccccaactgagcCTTGGCTCCACGTAATTTAGTCAAAACTAATAAGGCATTTTGACTAA--TAACTTTTCAATAGAATAAAATTGGTCTGGTTCCTACCTAATTTGAGCTT------------------GCTGGGTGACCTTAGACCAGtctctctctctctctctctctctctctctc s bosTau2.chr5 31203046 284 - 76426644 ATTTTTTTTTTTAAAGgaagcaagtcactaggtccagcccagactcaagagttgaggggaaacacagtgtatgaatacca---------gggggctaaggattgttaaagagtcataccagaagctgcA----------------------------------------------------------------------------CAAT----------CACCAAACAATTAAGTCAAAATTAATAGGGTGTTTTGTTTGGGGTGATTTTTCAAGAGAATACAATTCATCTGGTTCTTAACCTCTCTGAGTTTATTGGCAGAGaccaattcgctgggtgacct--gacaaatcacaccctctgagtctcagtttatttatc a score=10283 s mm7.chr15_random 3741136 594 + 7075849 GCCAGGGCCTCCTGGAG-----CTGTTGGAAGAGA-GGAGGAAGAGATGGGAGGGG--GGTTAGGAAGAAGCAAGAGAATCTCAGTGACATGGTGATGTGAGAAAG-GTCATGGAAGCCCAGGTGTT--GGCCTTGGCTAG----CCAGAAGCATCT-----------GGTGAAGGACAGGTGGTGCTGGGGTCTGGGGTGTGCTAAACGATGAGCTAACAGTGTAGCGGCAGCACGGTG-----CCTGGTCAGGG-CTGGCTGGATCTCTG-GGGCCTCCCTGGCCAGTTCTCAGAT-GTCATCCTTTATGGAAACT-GTCACCTGAGGCCACTCAGAATGTGCTGCTTTGTCTACAGGGCCAAGCTCAGACATTACGGAGCCCAGAGCCAGAGGCGATGGAGCTGAGCCACCGACAAGGTAGGACAGGAAGATGGGAAC--GTTACCTACACAGATTG-GCTTCTtgggg-------tggggtggggtggggCTCACCTCCTCATCTCCCTCGGTCTTGCTGAGGCCTCTAGATGGCATGGGTTGACCCACCC------AGGGTAC--TCTGAGCACAGAAGGAAAGTGGCAGGAACA----ACTGCTGAG--CCTTCCATCTGCCAGGCCTGGAAG-------CTCTACCTTAATGT s bosTau2.chr5 31203808 637 - 76426644 GCTGGGGGCCCCTAGAGAGGGTTGGGTGGTACAGATGGGGGAGGAAATAGAAGAAAAAGATTGCAAAGGAGGAAGAGGAACCCCA------GGTTCCTTGAGAAAGAGGCACTGGAGATGCGGTGATCCAGCCT--GCCAGGGTCCAGGAAGCAGGTCCAGTGCCAGGGGTGATGGGTGGATGGAGCAGGGGGCTCCTTGGTGCCAGA----GAGCCA------TGGAGGCAGCACAGAGAGCCCTCCGGTCAGGGGCTGGGCAGACGGCCACAGGCCTCCCTGTTCAGCCCTCCATTCATCTTTGTTTACAGAGTCTTGTCATTTGAGATGACCCTG--TGTGTTTCTTTGCCTGCAGGACTAAGCTTGGA-ATTACCTGTTCCACAGCAAGAGCCGATGGAGCTGGGCCACCGACCAGGTAGGATGGGCAAGCAGGGACATGCTGAATGCACATGCAGTGCCTCTGGAGGGATCCCCTGAGGACAGCAAGGACCAACCTCTCC--CCCTCTTAGTCTTGCTTTGGCCTCTAGACCTGCTGTGTGGCCCCGACTTCCTTGAGGCTTCTATCTGAAGACAGAAGGAAGAGGAAGGGCACAGAGGATTGCTGATCCCCTCCCATCTGCCTGGTCTTGGGGATTATGACCCCACCTTAGTGT a score=20999 s mm7.chr15_random 3744412 1213 + 7075849 AAAATGGAAGGGACGGCCTCAACAGGTCATAGG-CCAGCCTGGGTGA-TGCTGAGAGGTGAAGTGACTCAGGGTAACCAGGGGATGAGGCGTCAGTCCCTTGTCTG-AGCCAGGGAT-----GACAGAGTGGAAAGCCCTA--AGCTGAGGACAG-------------------AGTCTGGG-GGTAATGCATGTGGGAACAAGAAGGGGAAC--------CCCAAGATCCAGGAAGGTGACTGGAATGG-----------AAGGCAGAAGACATGGGGGACAAG--------------------------GAGCAAAG--------AGCCCGTTCAGGCACTTTGCCAACCTGAAATTTGGCCAAGCCAAGAGCCACCC-CTGCCA-CCCCCA----TGCCTAGTGGACTCATCT----------TTATGGTTTGTTGAGGCTCCAAGGGAGCAAGGGAGCTGACCCGAGTGTGCCAGGGAGCACTAAAGCTCAGAGAGGCTGGATCGCTCGCTCAAGACTGTGCATTT-----------CGGACAAGCCTGGGTCACAGTCCCTTTGGTCATAGCCTTGTGGGGACAACTCTGTGCTGTGGAG---------GTCTGCCCACTGATGTCCCTCTGTCTCCTCTGCTTTTGTGCCC---------TGCCTTGGGA-----TCCTGCGGTACCTGTGCTCT--------GCCCTGTA--GTCTGGGTCTGGCTCTCTGGTTT--TTGTCTATTTTTCTCTCCCATTGGTCCACCTGTCACCTGCCCTGCATCTGCTTCCCACGCCATCTTGTGCCCTCTGACCTCTCACCCTCCATCTTACTCCCTGCCCAGGTACAACCACGTTGACAAGGACACACCCGAACGACAA---GGAGGGCCAGCAGGACATGAACTCCTTCAGAGCTAACCATAGCTCCTTGGACAACTCCAAATTTAAGTACCATGC------------AAGGCTCTCCCAG------------AGCCCCTTAGGCAGCTCCCTGGGCCAGGGCTACCTGGAG---ACTCCACCTCTACCACCAACTCCTACCTGC--AGGACTTCTCTGGCTATGAACTCCCATCCTGAGGACCTGAAGAAGGGGGCATCCAGATCCAGCTCGAGAGATGCCAGGGAGACCTTCCGAGAGGGA-------TGTGTCGGG-GAGGAAGGCCAAGACTCCAGGTCCCCAGAGCAGAGGACAGTGCCTCTGAGCAAGAAGGACAGCGTCATTCCTGAGAACATCCGCCACAAATTTGGGAGCAAGATGGTGGACCAACTGATCTCTGAGGATCAGGTGACAAAGCCAGGGACTCACTCGGGAGACGACGTGGGAAGGAAGGTTGTCCTTAGAGGCTTTTAATGAGGATTC s bosTau2.chr5 31206425 1358 - 76426644 agaaaggaggagctggacttc-caggtagcagaaccagtctgagcaaaggctgggaggttggacatcatgaggtgtggtggggaaggagtggcagt---ttggctggagccagggatcagggaagagaatgAGCAGACCTGTGGGCTTGGGGCAGGAAATTCCCGGGAACTGGAAGTCAGGGCAGGAGTGGGGATGGGGACAGGGAAGGGGAGAGATGGGGTGTGAGAGCCCGGAAG-TGGCTGGGATGACACTATTCCATGAGCTGGAGAACAGGGGagagaagtggggttgggaagcagctctaactggggacaaaagctggccaacccagctctagtactttctagctgtgtgatttggccaagccGAAAGACACCCTCTGCCAGCTTTCACAGTTGCTCACTGGATTGTTGGGGGTCGGGGGTAGTGGATGGAAGAGGTTCAAGGTGCAGTAAGGAACTAACCAAATGGAGTCAGTT--CACTaa-gcacagagaggtcacctccttttctgaaggtcacacagctagcctcaaggctggtcaggctggggctgcaacccctgtggtcAAAAACA-GTGAGGGCTGCCTTGTCCAGTGTGACACTTTTCAGGCTACTACCCGCTCTCTTGGTCTCTCTCCTGATTTCTCACCCATACTTCTGTCTCCCGGGACTTCTTTCCGTCCTACCCGCGCCCCCCCACAACACCCCATACCATCTTTTTTTTCTACTCTGGGTTGTCTGTCTATTCCCCCTCCCCATT--CCCATC-ATCGTTTTCCTACCCTCCACTTTCTGCATCTGTCTGTCTCCTCT----CCTTCCTTTCCTGTCTCTTCCCTTTTCAGGTACAACCACTCTGACCAGGGCCCATCCGAACAACAACAAGGAAGGCCAGCAGGACACGGACCCCTGGAGAGCTGCCCATAGCCCTTTGGATACCTCCAAGCTCAAGTACCAGGCCCCGGTCTCCGTGAAGCCATCCCTGTACCGAGGAGACAGCCCCCGAAGCAGCTCCCTGGGGCGGGCCTCCCTGGAGGAGATCCCGCCTCCACCCCCTTCAGCTGTCAGCCGGGGATCCCTCTGG--AGGGACTCAGACCCGGAATCCCTGAAGAAAGGGAGCTTCAGACCCTCCTCGAGGGAGAGCAGGGCTTCCTTACGAGAAGGGGCTCAGCCGTGCCAGGCGCCGAAGG----------AAGACCCCAACGCTGGGG-------CCCAGGGCCAGAGCGGCAGCAGCATTCCCAACAACATTCGTCACAAGTTTGGGAGCAACGTGGTGGACCAGCTGGTCTCCGAAGAGCAGGTGTCAGAAC--GGGGCACA---GGAAGCTAAGGGTGGCAGGAGGGTCAAGCATGGAGATGGGCAATGAGGACCC a score=20478 s mm7.chr15_random 3746137 663 + 7075849 TGGGGGCTGCAGCCT----GCAGAGAGGAA-------GGCAGGGT---AGGAAGGAGAG----------------GACATTCACTTAACCCTCCTGGTCACTTTGTCTCTTGTC------CTTGCCTCCCCCATCAGGCTCGACAGGCCATTGGTGAAATGTTTGAGGGCCAGAAGAGGCCAAGCTCATGGCCTAGCAGGACCCAGAGCCCCATGCAAGCCTCCTCCATTTTCTCAGACTACTATGACCTGGGCTACCACATGCGATCCAACTTGTTTCAAGGTCAGGTTAAAAGGCAAGGGTGGGGTTGTAAAGCATGCTCGGTCCCCTGGACATTGGGCACCAGAGGTCTTTGGGGATTCT----GTATCTTAAGGCCCAAAGGCACAATCCTACAGACATCAACTTTACAAGCACCCAAGGCATCCTCCTTGCTGACGTGCCCTGTGGGAA-TACCAGAATCATCTAGT-CCCTGGCAGGTGTGACTTCACATG---------------CAGGTTACAGTGAGGCCCTCCCTCACTAGACACCTATGGTTTTCTAGTCTGCAAACAGGAGGCCTAGGTACTCCAGACCTCTGACACCTTTGTTGATGGTGACAAGAGCAGCTTTATtgggttcaaaggtcagcttggtcactcactagtggctggggacgactgtgaacaggaggcctcagctctctgaacctctgtc-tcttccttg s bosTau2.chr5 31209603 700 - 76426644 TGAAGGCTGCAGGCTTAGGGTGGAGAGGAGTGGTGAGGGCAGGCTCCAAGGGAGGAGAAATTAGAGGGGAGATGTGGGATTCACTTTGCCTCCCTA--CCTTTTGTCTTCTCTCTCCCTCCTTCCCTTCCTACTTAGGCTCGAAAGGCCATCGGGGAAGCCTTGGAGGGCCAGAAGAGGACAAGCTCATGGCCCAGCAGGATCCAGAGCCCCACGGAAATTACCTCCATCTTTTCAGACTACTATGATCTGGGCTACAACATGCGGTCAAACTTGTTTCAAGGTCAGGCCGAAAGACAAGGGTATGGGCTAGGAAAACCCACAGCCTTCAAGTTATTGGGCCAGGAAGGACCT---GGATCCCCAGAGGAATCTAAGACCCCAGGATACATCCCCAGGGACTCTCATTTCACAGCCACCaagggccctctgtatgc---caggctttgtgccaagtgctgggaatgtccagtcccctggcaagtctgtcctcacagagcagatggtcCCTCCCAGTTGGCAGTCAGCCCTACCTCCACCCTGTACCTCTGGTGTCCTAATCTGCCAAGAGGAGGCCAGTGCATCTCTGGTCT-GGCCTACTTTGATTACAGGGACAGTATcagccttcctgggttcaaagttcagcttagcca-----------atgggtatggcctcaggcagga-tccttaactctctgagcctcagCCAACTTTCTTG a score=7092 s mm7.chr15_random 3747123 328 + 7075849 TGGGGGTACAGAGTGCGTTGCAGGAGCTGCTTCTCTTTGCACCCT--TTTCAACTCAGCTTCACTGTCTAAAGTCCACTTTAACTGGCCC--------------TCCTCCCTCCAGCTGTCTTCAGTGCTCCCAGGGTCTGTCTGGCAAGACCTCCTTTCCCTGGCTTTGGGTCCCTGTCACCCCAGGAACCAGACTCACAATGGAAGCCTTTCTGGGTTTTTCTTTGAGCCTG-----AGGGCTCTTTGTCACTGGCTGGGGGAGGGAAGCTAGATTGGA---TCAAACTCCTCTTTCTCGGAGACTGGGATTCTCCTTTCCCTGTTCCACACTGGTCACCAAAGAGTTCT s bosTau2.chr5 31211092 328 - 76426644 TGGGGGTCCTCAGTGAGC--AAGGAGCAGCGTCTCTCTGTCCCCACATTCCAGTTTGGCCTCATTGCAAAATATCAAGTCTTTCTGGCCCCCTTCTTTCCTCCCTCCTTCCTCTATGCCTTCTCAGTGTCCTCAGGGCCTG----GCAA----CCCCCTACCTGGCTC-AGATCCTCATCACCCAAGGAACCAGACAACCACTGGAAAACGTTCTGAGTTTTCCTTTGAGCCTGAAGAAAGGGTAGT---------GCTTGGGGAGAGAAGAGAGAATACAGCCTCAGATTGTCCCTTTCTGAGTCTTGGGAGTCGGCCTTCCAT----TACAATTATCGCTCAATAATTTT a score=23417 s mm7.chr15_random 3752692 1154 + 7075849 AACCCTCCCATTCCCCTTCTCCTCCACAACAAAC-ACCCACAGAGTAAACTGATACTAAGATA--AAGCACAGGGTGCCTAGCTTCTGT-GACCTGAGGATT----TCTTTATGGTATCTGACAGGC-CCACCCCAGGAGACAAAGAGCCTCATGAAGGCTTCCTACACGCCCGAGGTGATAGAGAAGTCGGTGAGGGATGTGGAACACTGGCACGGGAGGAAGACGGATGACCTGGGTAGGTGGAAGCCTGGGGGAGGGGCGGCTCTTTCCTCCATGGGCAGGGAG-GGTGTCTCAAGGTGCAG-----------AGCAGGAGGGGGTTCCTTGAGGTGGATCTGAAGAGGCATGGGGGCACGGACCCCCGGGGTCTGTACCCCCTGGAAG--CTGCTAGCCA-CTGTGATGGTTGCTCTCCGGTTCCCTGCAGGCCGGTGGCACCGGAAGAATGCTATGAACATGAACTTGCAGAAAGCGCTGGAAGAGAAATACGGAGAGAAGAGCAGATCCAAGGCCAAGTAGTTGAAAGGACATTGGGAGGAAGCTT--------GAGAATGTTGCCAATAAAGAAATAAAGGCTGTGGTCTGCCACTGTG-CACTGCTT-CTTCCAGTGCTGGGATGGCGGGTGTGTGTGTGTGGTGGGGCACGATCATGCATGAGGCTGGAGGAACA-GCTGAGGAAGAAAAGCA--CCAGACAG---------------CTTCTTCATGC--------------------------------------------------------CTTCCTCCACGTCCTCGGGGAGAGTTGGGGGAGCGGA-----------------TCCAGTGTGCTCT------GGTGACAGG-TCCTCTACTAGA-CACTGCTAGGTTGCACCCTGCATATGGGCCCC--TAGTA-GATTTTAACTGTTTCTAGAAGTCTATTTCGCCCACACGAACCAACGGATGTCAGAGGGATGGTCCACAACACCCATCTCTCCCAGCCTAGGGGCAGATCTGATGGGTCT-------------------CTCGTAGGCACAAGCtgattggttcag-agtggccacgtggctcagcttgggccaataagGGGAATGACAAGGTGCAGAT-------GCTGCCTGGGAAGCACTTATCGGAGCTGGACATGAAGCAGAGCATTC---GCTACTAACATACTCAATGAGAAGTTAGGAAGCCAGGTAGACTGC-CTTGGCGGACATTCTAGAACCAGAGGAACTGTGGGCGGCTCAGCATGGCCTTAGTCTTTCTGGACCTTGCAGAA-GCCACC s bosTau2.chr5 31219088 1271 - 76426644 aacccttcctaacctctgcccttcCACAACCCATGATCCACAGGGGAAACTGACACCCAAATATGAACCCTGCAGTACTTGACCTCTGTTGACTTGGGGCTTCTTTTCTTCATGGGGTTCCATAGGGGCCCCCACAGGAGACGAAAAGCCTCATGAAGGCTTCCTACACTCCCGAGGTGATTGAGAAATCGGTGAGGGACTTAGAGCACTGGCATGGCAGGAAGACGGATGATCTGGGTAGGTGGGAAGCTGGGGTTGGGGGAGGAGGGAACTCCCTGGGTAGGGTGTGTTGGCCTAAGGTCCTGAAAGAAACCACAACAGCAGCTAGAGCCCTGGGGTGGGCCTGGA-AGACATATGGGT---TGCCATTGGTACCTGCACACTCCAGAGGTCCTCTTGGTGATTTGTGCTGGCTCCTTCTCTCCGCTCTGCAGGACGGTGGCACCAGAAAAATGCGATGAACATGAACTTGCAGAAAGCACTGGATGAGAA------AGAAAAGAGCAAAAACAAGAACTCAAAGTAGATGCAACCCAGGAGAGGTGCCCTCCGCTCAGAGAAAG-TGCTAATAAAG----AAAGGCACACATCCGAACCTTTGTCTCTGCTTGGCTCCTCTCTTCAGGTTGCGGGAG------------AGGGCA-----ATGTATAGTGCTGGAGAAACCTACTGAGAAAGGACAGAAGCCCTAACAGTCCAAACTACCGTTCCCTCCTCACCCAACCCCAGCCTTTCCTCCTGGGGacacacacacacacacacacacacacacacacGTTTCCCTCATAATTCCAGGAAAGGATGTGAGAGCAGAATGGAACTCTGCTCAAGCCCGGGGTGCCTCGCCCGGGGCGAAGGGCTCCTATAGGGGACCCCTGCTGGATCTTA--CTGCAC---GGCCTCCATAGCACAACCCCAATTATTTACAAACATCGGTTCCTTCCCCAAGATCCAatggacttcagaggaactggcca-------cgcctcctccaatccaggggtaattttgattggtcttcagaaattctaacccttccttctacacacaaagtgattggttcagaaaggggcatgtgattcaacttgggccaatgagatgcaagaaaaggtgtgggtgtgtggagcattctgggaaattcttttctctacttggaaagcttGGGAGCCTTCCTTGCTCCTCTTGTGGTGAGAGAAACGT------GCAGAGCAGACAGCTTTTGGCAGATACCCTATGACTAAAGGAACTGCAGACACTGCAGCACAATC-TGGTCCCCCATGACCTCATGGAACGCCATC a score=5741 s mm7.chr15_random 3754248 520 + 7075849 TTGGACTTCTCCATGGTGTAATGACTGGCATCTAGGAAAGATCCAAGGGAGGCA-GATTTAGTGGGCAATGGTTTAGCCAGTGTTA-CACCGGGTGGTTAATGTCCCCATGTCCTTGGTCTAAGA-ACACATGGTCAAGGCCAGACCATGACAGGAGATTCCACAGATAGTACTGTACTTCAAGGGGCATC------TTGAAGACT-GCCAAAATGGAAATCTACCATGGTGATCACTCCACTTAGGATAAATCAAAGAAAGAGGCATCAAGGTCACTGGCAGAAGGGGACATACTGTGGGCCTCCTCTTTCCCAGCCTCAGCTTCCTCCAAGTGAGGGAAATGTTGGTGGGGGGGGGGGGTAGGGGGAGGCTATCTAGAAAGAGATACAGCTCAGGGA-GCACATCCGATGTCACCTCACATTTACCAAG---CTAAGGGTGTTCAAGGTGCAAGGCTCAGCTCAAACTCTCT----CTGGGTACCTAGTTTCTGCAAGGT-CTGTCTTTGGTGCTGGGAAATCTAGACCCCACCTCT s bosTau2.chr5 31220867 476 - 76426644 ttgggcttctccctggcatggtgactgtgttccaagtagtctctcaaggagacaagactcaatgtgttagaacttatcatgtcttaacactggcttgttaatgtccctgtg------atcagagacaaatacggtcaagtcaaacttctagtgggaggtggctaaacaagagcattcctatcagcagaaacagttcactggagactcaccacaataactgtctaccacaGTGACCATCATCCTCTGGAAAAATCAAAAGTGTA----------TCTCTGGCAGAAAAAGGGA----GCGGGCCCCTTTTTCCACAA--------------AAAGGAGTGACATCTT---------------TAAGG----------TAGGATTGGATGTAGTACAGGGAAGTGAATTTGGCTTGATTTAATATTTACTGGGTACCTTACTGTGT--AAAACATTGAGTTCAGCTCAG-CTTTCTAATATTAGGTACCTAATTTCTGCAAGACACTGTTCTT-CTGTGAGAAAAACTAGATTTCATCTTT a score=4636 s mm7.chr15_random 3755881 574 + 7075849 CTGGTTCTGACTAATGAGCTGTGCACACACAGATGAATAAAAGGCCATGGCACCTGTCATACGGG--------------CAAAGAGATGCATC-------------CATAAGT-----GCATAC-AGCAGAGACCCATGTGGGGCCATGGAGGAAAACGTGGTGGTAGGGGCATCAGGAATGGGGTGGGGCGTCTCTGGTCAGGTGGGAAGTTTCATACCAGAGGC-TATCTC-AGAACAACTTTGGGTCAC------------TGAGATGGACCAGAAGGGGCACGACATTC-------AGGACAGCGTGCTGGGTAGGAATCCCTAGCAAGGAGCATTTGAGGCGATGAGTGTAGCTCATGAAACTTGGAGCAGAGG--TCCGTGGAGGAG----------ATGGAGGGACAGCAGACAGCACCTGAA-------------GGAGCTGGCTCCCGGAAGCACTGTACCTAGGACGCCCAGTGCTGCCTTCTAGGAGATTATGATCTGGCTGAAACATATAGTCCT--CAATGACAGTAAACAACAGCAAAG-AAAACTGAAGGCATGTTCATTATTATTCTGAGCCATCCCA-AGTGCAGATGAGGACATCAGCTTACCAGA-TTGACATAAATTAGAA-GCAAGGCTAGAAGAGAA s bosTau2.chr5 31223559 639 - 76426644 ccggtactgaacaataaaccagaagttcagagatgaataaaa---catggcgcctgtcctcaaggagtccagagtttggtggagagacgaatcaatcaaagacgctcataagttttacacatgccatgagaaggtcatatggggcca---atggaagcacag----agatgaacctggggtgggagagag-ggctgggggctcatagatgacctcatagaagaggaagatcttgaggtgaaccttgggacatgagtaggtaggttcagatggcctggaagagttacagcattccagactgaagatattgtg-tgagcacaaa--cctagCA-TGCTTATTTGGGGAGCTGCTTAT---TTGTTAATCTTGGAGGGTAGGACTCCAAGGTGGGGCACAAAGGTCAAGGGGGAAAGGTTCACAGAAAGAGAATATATACTTAGATGGGACTGTGCCTTGTGAGGGTTTTGGATGTGAGATCCAATCCT-CCCTCCAGGAGCTTAGAGTCTGGCTGGAACACAAAGGGCTGATAATGACag-aagcaaccacatagccaagttgaaaagatgctcaatacctccaataattagaccattatgcaaattaaaacaataaattcatagagttggcaaacattaaaatgcaagtataggtgagga a score=11821 s mm7.chr15_random 3756824 737 + 7075849 AAGAACTAGGGCATGTATAACAGAACTGAATTTTCATCTGCCAGCCTCAAAATTCCATTTCTGTATAGTCTAGAGGACCCCCTTACACATGC---CGAGGGAACCCGCCCCTGAATACTCACTGCAACGCTGATT----CATGAGACCACCACCCAGATGTCCATCGGCTGGAGAGAGGACAAATGGG-----------CAGTGGGAAGGAACGAACCTCCCCTACACACATCACAGAGCCAAGTCACCATGTGCTTTGCCCAAAGAGGTCAAGAC------CTGCAGGTTGAGACCCACTGTGCAAGACCACACCCATCATGTGACCCTCCAAAGGCTGAC------------CAGGGCTCATGGGGGT-------------GCTTGTAAGAGTAGGGAGAGGGGACTGAGAGCATCATATGGA--TCCACCTTCATGCTGCATTGAGCCCAGCACTTTCAGGGC--------CAGT-----CTGGCGAGAGAGCGGCTGGCAGAGTGCCTTCTGATGGG------------AGGAGGTGCCTG-TTAGCACAGTGCCCGTGAGCTGAAGCAAAGTGAGTGAGTGATTTCCATTTTGGCCTAAGTGAACCAAGGAA---GCACATTCTATGACTCCACCTCAGTTAAAGATTCCATCTC--AACATGAAGAAGAGCTTGATATAATTAGACAT------TTTTCTAGAGAGAGCAAAGCTGTTGTGCTGGCAAACTAAATAAAACATGAATAGATTTTTTTTTTAACCTAAAGGAGGCCTTGATTTC-CCAGTGCTGCTTTTGACAGCACTCTTGGCTCTCCGTG s bosTau2.chr5 31224241 806 - 76426644 aacagcaaggaagaatttagcaaggttgaaattaaattttacaacctagcacttcaatttctgcacagcttagag-agactctgaaaaatgcacacaaggaacctcatgcaaagttattcattgcagcattgtttgtaacagcaagacaacacacagat--ctgttaggcagagaatggacaaGGCGGGTAATTtatgacagtggaaagggctgaaccacatctacatacaccagcatggaaag--atctcgtgatatatcatagtgggtggaaatgacagtctgcagaatgagccttacagtatgaaat-gtgccatttatgtaaccttcaaaaaGCACACACCCAACAGCTTCATTGCTCGTCAGAGTTGAGCAATTTTCCACCT-TCACAGTATGGAAGGTGGATTGAAAGGATACTGCAGAAATTCAGATTCACATTACATTTGTtttgtttctgtaactgctttgtttcctgtaactgctGGCGAGAG-----CTGGCAAGATGCCCTCTGAGAGAGCTCAGATGCTCAGGAAGAGCCTGAGTAAGAGAATGTGGGGAAGGTGATTTTAAGTTAAACAAGCAATTTCAATTTGAACAAAATGAACAAATGAACAAAGACATTTTATGCCTTTGCTTCAGTTAAAGATTTTATCTCCGGACATTAAGAGAAGCCCTTTTTAATTAAACATTGAATATTCTGGAGAGAGAGAGAAGCTGCAATCTGGGCA----AAATAAAACATGCACAG----CTTTTAAAACTTAAATGAGACCTTAATTTCACTGGTGCTGTTTCCAACAGCATTCCTTGTTCATTGTG a score=2460 s mm7.chr15_random 3780627 524 + 7075849 cacacacacatacacacacaaacacacacacacacTGCCTTGTTTTGCTGTTTTATTGTATGTAAACATGTTTATTACAATATTTCCTC-----------TTATGCAAGGCACTTTGGCATTCACATCTTAA-----------------CATGGAGGCCACTCCTGTTTGTTTCTCTAGAGTGGTC-ACTTTGGAAAGTATTGACAGGCTGATGTTGAACATTGCCACTGCAACACACTCAAGATGTTAGTGGTTTTCTT-------------TGCTGCAATGAACAGAGACC----------------AAGGGACATTTGATCTGCCACATTCTATGTCTGCCATCATGTGA----------------------GTGAGGCCAGGGGATAGGAC------AGACCAGATCCAGTTCATGACTTGGTGGAT-CATGGAGTGCCTGACAGAGCACAAATAGGTGAAGAA---ATGATACAATGTCCATTGACTCCAGG---TCCATAGAACACATCAAGACTGAA-CTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATAA------ACAAAGGCA s bosTau2.chr5 31261629 595 - 76426644 CACCCCTGCGCATCCACCTAAACACTTATATACACA--------TTAATGTCTTGTAATAA--AAATAT-TTTATCACAATTTTTTTTCAGTTAACAgtttttttccaaccattttggaattcacatcttggacttctctcttaatgcgcatag-gtccacttcattcattttgcacacaggattccaccttagaatggactcaaattttg-tgattagttttactatgggtgaagatttcaactgtttatcattttcttcggctacaaacaatgccataatcaacagggattttatggatGAAAGAAACAAGAACATTTGTTCTGCCATTTACTA-------AAACATATGATAAAGCTAGAACAGTCTAAGCAGTGGGGTCCGTGGAGAAGATCATGTAATAAAAAGTCTAGAAACGGACCAAGTGTATACACAGATTTTCTGTATCAG-ATACACAGATGAAGAATGGGTGATTCCA---CCAGTGAGTCCAGAACATCTGGGCTACTTGTCTAAGCTGGCTCTCCTTCTTAAATGCATACATTCCAAAAGAATTCCATACATACAATT-----TTCAAACACAAAAAGAACCAGAAAAAATATAACTTTGGACAAATGCA a score=47809 s mm7.chr15_random 3782474 2265 + 7075849 AGACTCAGCACACCTTCCCAGACTGGCTATTGTCCCAAGGGGGCAGGGACAGGTAGTCCTGATGCTTTAGGGACTTGAAAAACTGAATGGCTGGCGCCTGGGGCATGGGCTGATAGGGAAACTTTTTGACAGACAAGTCCTGGACTAGGTCCTCAGTCTCAGAACACAGACTTGGAGAGGGTGGCTTACTGTGTGGTGAGAGGGAGCCAGGTCCCAGGCCAGGGAGGAAGCAGTAGTCCCCAACCTGCTGAAGAACAAGGAGGCCTTCGGGATGTGGGGATGCTGGGCCCACTTCCTCCCTGGGCTCTCCTGGGATCACTGTGGGGCTGCTTGCCACAGGAGGAGCAGGATGGCCTGGAGGGGACTTGGCAGCCTGGCTCACACTTGGAGGCAGCTCCACATAGTCCTCAAACCCTGGTGGCCCTAGAGCTGGGCTTCCAGAGGGGACCCTGGGCAGCTTAAGACAGAGACTGGGGCTTTGGGCTGAGGGCAACCCTAGAGAGGGGCCCAGAGAGGTAGACAGGGGCCCTGTGGGCAGAGTGAGCACCGGATCTCCAGGAGTGACATAATCAGAGGCCATCATACTGCCCTCAGGGCCCCCAGAGCTTATGGGCAGAGTCACTGGGTTGTCCCGTGCCTCCTGTTCCT------CCATGCTCAGCTCAA---CTGG------AGGGTTCTCCTTTGGCTCCACAGAAGGGCTCCCTGAGGTCTCCAGGCTGGACCCACACTGCACATCCATAGCCTGGCCCTGCCCCATCACCTGGGACAATGGAACCAGTTGCGCTTGACCTCCAGGGGGCAGACACATGTACTCCAAGGAGCCTGGCAGTGCTGGCTTCAGGCTCCCACCCACCTGGGGGGAACCCAGCTGGTCTGGGAGATCAGGCAGAGAGTGGGATTGGGGAGGCCCCAGGTAGGGCCCATTGAAGTCAAAGCTGGGTAATTGCTTCCTAGGTCTGTT--AGGAGTTGGTCC-CTCTACTTGAACATTGGGAAGTTGCTCTGTGGATTCGGATGAGGCAGCTGGGGTTGTATCAGGCCCGGATGGTGGAACTCGAATTATATTAGGGTCCTCTATAGTGAGAGGTGACACGTTGTTGTCTTCCAAATGTGCATATGACTCCCTGTCGGGACAATAGGGGCAGAGATGTTGAA-----CCTAGGCA-----CTTAGTGTAT------AGCCAGAGCAGGTGAGCTCTAGGAAGGCCTGAATCCCCTCTGGGCCTCACAGTAAGCACCGA--------------GGCATGAGGTCCTGTGAATGACATGGTGTG-TGTCCAGTGTCCCAAAGTGTCACGTGCTCAGGGCTCAGTTCACACCCCCATCCTA--------ATGTTTGCTCTCTTCTGCTCCTTGCAGCAAGTGTGAAC---CTTCAGGGCCGGGTTCACACCTGCCCATATGGGGCTGCTGACTCCCTGACATGTGGGCT--TAGCAGGC-----------------------TGAAGTCCCACAGTGTGCACTCTCAGTCACCCA-TGAGGCCATTGCAGTGCAGGGCTTACATAGGTCACTTGGCAAGGAGAGGCTTCCTGCTCTGGGATGCTGCCTCTGGTCCCTTGTCTGTTTCACGCCAACCGGGGAGTCAGAAAAAGTCTTCCTCATGTCTACCTGGAGTGCTGTTTACTACAGTG--GGCAGCCTC------TCCTCTCAAATTCAG----AGAC-----CCACAGGCTACAA-----TGATGTGCACCATGGACAGGTT-TCCTCCCACAGGCTCCCCAAGGGTCAGAGCCCAAACACTCACCCCT---GTTGCTCAGCAAGAAGCCTGCTCTGTGGCCCCTGGAGAGCGGGGTTCTTAGTGGCGAAGGCTGCCATGCTGCCAGGAGGCCAGAGACCTTTACCTCCATCCTACAAAG-GAAAGGGCATTTGTGTCTGTGAATGT--GGCACCTCAGGAAGGACACATGTGCATATGGTGTCTTCCATAAGCTCTGGACATGGGAAGAAT----GTCCCCCTGGTAGGGCC----------------CAGCTCAGGCCTCTGACTCCAAGAAAGAAGAGGCATCCTAGGGGTTGTG---TTCCCTTAGCCCTAAAGCTCCTGAGGTAAGCAGCCATGCTGTTCC-------------CTATAGCCTCTTCTCTCATGGCACTGGTGTCTCCCCA-----------------------TGACCA--------TTGTTCTGTGAGACATGGACAGCC---------GTGTCC------TTCTGTCATTCCCATTC--CTGTCTC-----AGGAGCTG-------ACCCCCTGGAGACACCCTGGTTGCAATCAGCTCTCCCACCAGCTCTAAGGCATCTTGCTGTGC-----AGTGCTCAA-------GTCCTGTCCTGGAGA---CACTCAGCCC------------------------TGTCTCTACCTC-------------CAGGAGCCGACTCTTCTGAGCCATTTT s bosTau2.chr5 31263969 2416 - 76426644 AGACTCAGCACACCTGCCCAGGCTG-TTAATGTCCCAAGGGGGCAGTGACAAGTAATCTTGCTGTTTCAGGGCTTTGAAGAGCTGAATGGCAGGCACCTGGGGAA-AGGCTGAGCCGGAGGCTTCTTAGCCTGGACCACCTGGTTGAGGTCCCTGATCTCAGGACAGGGTCCTGGGGAAGTGGGCTTACTCTGGGGGGAGAGAG------------GGCCAGGAAGGAAGCAGTAGTCACCCACCTGCTGCAGGACAAGGAGACCCTCAGGGGTAGGGGAGGTGGGGGACACATCTGCCCGGTGCGGGCCTGGGCTCAGGACAGGGCTGCTGACTCTGGGAGGGGCAGGGCTGGCTAGAGGGGACTGGGGAAACTGGCCTGTGGCTGGAGGGAGCTCCACATAGCCCTCGAACTCTGGTTTCTGGGGGGCTGAGGCTACAGGGGGCCCATCAGCCAGTCCAGGATGGAAAGTGGGGTTCTGGTCTGAGGGGAGGTTTGGAGGGGCAGCCTGGGAGGGAGATGGGGCCCCGATGGGTGGGGTGAATATCAGATCTGGGGTGGTGACATAACCAGAGGCTACGGTGCCATCCTCAGG------CAAGCCAGTGGGCAGA---ACTGTGGGGGCCCTGTCCTTCTGATCTTGACCAACCCCCATCAGCCCAGGCTCTGGAGGGGCAGGGTCCACCCCTGACTCCAGGGAAGGGCTCGTCTGGGCCCCTGGGCTGGACTTTGTGTCCCCATCCCCGGCCTTGCCCTGCCTCTTCACCTGGGCCAGCGGGACCAGCTGCACCTGCCCCCCTGCGGGCAGACACAGGTACTCCAGGGACCCCGGGGACTGTGGCTTCCTGCTCACCCCCGTCTGTGGGGGCACCTGCTGGCCCATGAGGTCAGGCAGGGAGCAGCTGTGGGGCGGCCCCAGATAGGGACCGTTGAAGTCAAAGCCGGAAGCCTGGCTCTCAGGCCTGCTTGAGGGGGCAGCCAGCCCTGTCGGGGGGCTGGGGGGCTGCTCCGTGGGGAGATCCGAGGCAGTCAGAGTCATGTCCGGCTCTGATGATGAGTCACAGGCATCTTTAGGGTCCTCTGTGGTGAGAGGTGACACCTCGCTGTGCCTGCAGTCTACAGGGAACACCCTGTGGGGAGAACAGGAGCAGAGATGCTGGGACCTCCTTGGACAGACGTCTCAGCTCATGCACAGGGGCAGAGTGGGTAGTGGAACGAGAGGCCTGGCCAC--------ACCCACAGAAAACTCAGAGCAGGGCAGTGTTGGGGAGCAGGCCCAGAGCAGGAAACCAGATGCTGCTCAGCCTCCCCATGGGTCTGGCCCTCCAGCTTCTGT----GCTCTCATTCAAGGTCAGGGACCCCTCCCACCCTCCACTCTTTGC------TATCACCCAGCTTCAGGGCC-------CAGGTGTCCAGCCTGGGCTCAGTCATTTCTCACATGAGGGTTAGTGGCAAGCTAGTGGCTCAGATGCTGAGGCCATGAAGGTTCACAG-----ACCCTCCGCCACCCAGTGGGGCCAGGGCAGTGTGGGGTCTCCCTGGGCAGCAGGGTGAAGGGAGGTCATCTGCTCCAGTCTCCTGCCTCCGGTC-------------------------AAGTCTGAG-------TTCTGACCCTCGCTAGGGATGCCTCTTGCTTTAGCACCACCAGTCTCTATGGATTTCTTCAAACTGAGGCCTAGACCCAAGCCACCTCCTCCAAACCTCTGGTGTGCAGGAGG---AGGCCACCCTCCCACCG----CCCAGGGATCCCCTGCCCAACACTCACCCCTCCAGGAGCTGAGGGCAACTGCTGCCCCACGGCCCCTTGTGTGGGTGGCTCCCACTGCCCAGGGTGGCCATGCTGTCTGGCATCCGGAGTCCGGCGCTCCCATTCTGGGAAGAGAAAGGGCATTTGTATCTTTGGGAGTCAGGGCCCTCCAGAAG-------GTGCAGATGGAGG-----AAAGGCCTTGAGGGTGGTAGGGATTCAGGAGCCCCCAGAAGAGGCAGATACTCAGAACCAGCAGGACAGCCTCCTGACACC-AGGGAGATGAGGCCAGAGAGGGGCTGGGACCTTGCTGGGGTCCCGGGTCTCCTGAGGACACTATCTGGACTGTCCCTGCTCCCTGCTCACCCCAGCCCCCTCTGCACCCGCCCTGAGACCCTCCCAAGGCAGCTCTGGCCCTGTGTAGTTGACCAAAGGGCTCCTGTTCTCCAGGGTCCTCTCAGCCTCCCGCGATGTGCCCCAGACTCACCGTCCTCCCCACTCAATTACCTTCTGAAAGGAGCCTCATCTCCACCCCCCACATGCCTTCTGCCTGCCATGGCCTCTCCCACCTGC-------CACCACCCTGCACCCATTAGCACTCAGCTCTGCCGTTCTGTCCTTGGAAAACCACTCTGCCTCCCACCATCCACCTGCCCTCGATGTGACTACACCTCTCCTGGAGCCTCTCAGGGACCAGCCCCCCTATGCCAACCC a score=11340 s mm7.chr15_random 3784880 885 + 7075849 CGGACACAGGAAT-GGGACAGGGAGCCAGCAGCA---GGGC-------------CTGCC-----------TTCCTACCTGGAACAGGAGGCTCTTGCTGGGGTTGGGGATCTTTTCCTTCCACTTCCTGTACGTCCTGG-AAGACAGCAGGAGGGTGGGGACACGTGTATGTGAGATTCCATAGACCTCTGTGCCAGCTACTTCTGTGCCCACGTATAGAGAGAAAACTGAAACCAG-------------------------------GGGAGTGAATGGTAG-GCTGGGAACGAGAGTGTATCCAGCTGTGTCAT-CTCTGTGACCCCGGAGCCCAGTTTCCACTTTCCTCTGCGCACAGAGTGCACTTACCTGTATACAGAGACACAGCCAAAGCGAAGGATCAGGAGCAAGGTGAGGATGAGAAAGACCAGGATGAGGACTATCCACAGCGTGGGCATCACTT-----GGTCAACAAGG-AGAAGCAGCATTAG-----ATGGGAGGCACAAGCTGCAGGCT---AAGGGAGGAAGCTAGTGTCTCCC----ATGCCCTCTGTGAGA-AAGGCCAGGAAC---CTGGGAAGAAACCCTGGGTCCGCTCCCTG-----TCTTCAATATGG------------------GGAAGTTCTGCCCTAAGCAGCAGCAAG---TACCCTGGGTGGGGGGTGACTGAGCTTGTCAACTG--------GGGGACTTCTTGAA-------ATGAGGAGCATGGGCTATGGCTTACTGATGCAGGGA--GGGTCAGAGGAGATGGGAAGGTTTCCAGCAGAAG----------------------------GTCCCCTAG----------CCTTCTTGAATGGGGCCTTGTAAGTCCCC-----TCCCCATCTCTGGAGTTC-ATGGCTCTAGCCCTCTTTCTTCCAGAAT--GACTCTCACTCTGAGATCCCCCCTTCTGACAG--GGCTGACTATGCGG-----------AATGCTTCATTACCATCCCCCACCCCACATCC---ACCTTGCACAGTGTGTGT---CAGGCAGTCACTATGG s bosTau2.chr5 31266554 1033 - 76426644 AGGACACAGGCATGGGGACATGGGCGCAGGAGCACATGAGCCCCAGCACCTCTGCTGCCCTCACAGCCAGCTCCTACCTGGAACAGGTGGCTCTTGCTGGGGTTAGGGATTTTCTCCTCCCATTTCCGGTTCAGCCTGGAAAGACAACAAAGAGGTGACTGC--------------TGCCCAAGACCTCAGGG-CAGCTGC--CTGTGCTTATGTACGgaggtaaaactgaagcccagggacagctcagatctgtccaagaccccattgggagcgggtgacagagctgtgacagatagtg------accctggcatcctCTGGGGCCCTGGATAACACTCTCCCCCTTCTT--------GGAGTCCCCTTACCTGTACCCGTAGACGCCACAGAAGTGCAGGACTGGAAGCAGGATTAAGGTGCTGATGACGAGGATGAGGGCTAGGACCCACATGGGCAGCACTTCAGGAAGCCAAGAAGGAAAAAGGATGATTAGCATCCAGGGAGGGAAAGAGCTGGAGACTCAGAAGACAGGGTGCCGCTGCTTCCTTGGGGTGCAGAGGAGGAGAGGAGGCCAGAAACTGACTAAGAAGAAG----GGGGCCTTTGTCTGAGCCACCCACAATGTTGACTTGGTGGGAGGACACAGAGGGTTAGATCCTGGCCAGTAGCAGGAGTTGCTATGGGAGGGCAGCAACTG---TAGCCAAAGGCAATCACAGGGGACTTCCCGAGGGAGGTCATCAAGAACAGGGACAACAG----GAGAGGCAGAGATGGAGAAAGGGGTGATGGTGGAGGAACCAGAAGATGCAAAGGCCCATCAAAGACTCTCTCAACTGTCCACTGGGGCTTAAGCCCCTTACTGGCTGGGCCCCTCCAGAACTCCCCTGATCTCTTTCCCTTAGGTCCTGTGGCCCAGTTCTCCTTTCTGCTTGGTTGGGGTCCTCTCTCTGGGG-CTCTTTCCCTGACAGTTGGCTGGGACTGGGGACCTTGTTGCAAACACTTCGTCCTCTTTCTGCA-GCCACCTCCTGGACCTTGTCCTATACTTGTCTCCTGGTGGCCACCATGG a score=15906 s mm7.chr15_random 3785924 1393 + 7075849 GAAAGCCAA---GAGCCT----TATATAAATAGAGGCCTGGGCCCTAG--------------------------------CTCCTCTCTCTCCCTAAGGCCCACTTACAGT-TGTGTAATGTACCAAGTG------------------------TATCCCACAGGGATGGACAC------AGGGTAGAGTGGC-TCTCTG--------CCTCCCTTGCCCTATGTA----------GTCCCAGGAGTGTGGTGGTGGC-CGAGGGACATACCCCAGTCAGTCTTCCAAGTGTACTCTTCGCTCCACTTGCTCCAGATCCCATCGTAGTT---AGAGATGGGCTTGACCCTCACCCTGGCGCAGTATGAGGTGTCTGGCTCCAGCTGGGAGAGGTCCATGCTATGGGCTCGATCTAGGTTCTCTGTCTTGCTGTCCTGTAGAGGCAGATGTG------------CTGA--------------------AGCTGAGCCACCAGCCAGGTTCAGGGGCTCAGCTGCCTTCTTGGCAACTACCCCCAAATTGGTTGTC---TCTCTAGTCCAGCCCAGGAT--GCCATTCCAGAGCCTACTATAACCAGCCACTGTGGTGGCCCCAGATATCAGCCCTTCC-----ATCCCTGACA------GCTGCATCCAGGCCCAAGACC----AGG------------CTATCTCCACCTCCCAATTTG--TTGCTGT-GCCTTGGCCTAATTTCTGTCTGGTCCAGGAATACCATGCTAGTTTGCTGGGTCCTA---------------GCTTAGGAGTTGGGGTTAGG------------------ACTGACTCTCTGGTT----GCCTCAGTTTCCCTACTTCCTGTCTGAAGCTAGAATCCT--GGCTGACT-----GGTCCTGCTTTAGTCTCTGTGGCGCCCCAGGGTCTGCATCTAGCTGGCAGGCCTTTGCATGTGTGATGCATGCTGGCCAGGACT--------TGCCCTCAGCTTAACGCACAGCAGCTGTCCCA----CTGGTCAGATCTT------------------------------CTTCCATGGAGGAAATACACCCAGGCCTTGGTGATCTTTG--AACCCTTCATTCCATTCCTCTGCCAGTCTGGCCCCT----------------------CAGCTCAAGGGCA---GCAC----TGGTCATGTGACCATGCCATGTCACCTCTCTGAGCCTGAA-TCGCTCATCAAGAA--------------------ATTGGACTGTC-------TCCTGTTGA--CCATGTGGGTGCCAAGGTACAGGGGTC--ATCCCCTTTGCAAGTAGGGCTCCCTAGAATGTCCTTT-------CTTTCCTCTACTCCCTGTCTGTAACATCCCCTGGGTCCTGGAACTCACCTCCCAGCTGTCCGATTTCTTCTTGTACTGGACCTGGAATGTGTGCTCAATGAATGAGTAAGCCATCTTCTGAGTTTCCCAATGCAGGCTGTAGCTGTCTCTGTTCTTGGTCAGGTTGAGGGTTGGAGGCTCCATCTGGACTAGAGGGAGGATCA-TTTCAGGGAATGCCA-TCATGCCCTTCCCCCAGCAGGATGTTCCCCATTATCCAAGCTTGTCTAATGAATTCTCCAAGCTGGTCCAATATCCCTAACCCCAGCCATTCTGACTGTTTTGAACTC s bosTau2.chr5 31267963 1668 - 76426644 ggaagccAATAGAAGCCTGGGCCATATTAATAGAAGGCTAAGGTTCAGTCTCAGGAAGACCTGTTGGTGAGACGTGCTCTCTCCTCTGTCCCCTGGAGACCTTGCCGCAGTCTGTGCTGCACACCAGGAGGTATAATTTTCTAATCCCTAATGATGTCTGGGAGGGAAGGATGCTATCCTGGGGTGGGGTTACGTCTCTGTGTTCATATCCTCCCTGTCCTCTGCCCAGCAGGGCTGTGCCAGGAGGGGTGAGGGGGCGTGGCAGACCTACCCCAATCGGTGTCCCAGGACCTTGCTTCACTCCACTCGCTCCAGATCCCATTGTAGTTCCCCGGGTCGGGTTTGACTCTCACTCTGGCCTGATACCGGCTGGCGGGCTCCAGAGGTGGCAGCGACATGGTGTGGGCATTCTGGAAGTCCTCTGTCTTGGTGTCCTGCAGGGGCAGGTGTGTGAGCAGGAGTCCTGAGGTCTGGGGCACGTGGGCACAGCTACGAAACCCTCCCGCCTCAGCACCCCAGCCTTCCTGCTACCCATCAGTTCCTAGCTTGCAGTCACATCCCCAGATCTGAGCAGCATCAGCCTCACCACAGAGGACCACACT---CCAGAGGGACAGGACCAGGGAGCACCTCTTGTACTGAACTCCTGGCACACATGACAACACCAGGGTGCAGAAACCCTGAGGAGCCACCATGCCCCGCCTCACCCTCCCAGCTCGCCTTGGGGCAGCCTGGACCCCAGATATGATCTCCCCTGGAGTGCGGTGCAGGGTGACCAAAACCTGGACCACCAAACAGATGTTCAGGAGC----GCAAGGACCACTCCCAGCTCCACCACTAACCCTCTCCCTCCTGGCTTCAGTTTCCCCATTTCCAG-CTGAA-----AATTCTGGGGCTGGCTCTGAGGTTTCTGATCTGCCCTCTGTGGAGCCCCAGGTTCTG--TCCA-----CAGGCCC-----CGAGGGCTGCCTGAGGCCCAGGGCCAGATTCTGAGCCCTGGGCTGAGGCCCTGCCGGCCTCCCCAGGAGCTGCTCTGCTCTTAGCAGCTGCACATTTGCATTCTGGATAAGATTCTTATGAAGAAGTGTCACC----TTATTATGACTTTTGAAAACCCATC-CTCCAGCTGCCTCTCAGCCCTCCCCCTCCTGATGTCCATGCCCCCTTTGCAACTCAGGGTCAtgtgtacattttggccaagt-------tcacatcatctctctgagtctcagttccttcgccaaagaaagagacaatgagacTGCTCATTGGAGTGGCCACCAAGTCCCAGTGGCTCTCTGTGGCTGGTCACATGCTGGGAGCCAGGCATCTGGGCAGGTGGCATTTTCCCAAGTGTTGTCTCGCTGCCCTTTCCTCCCCTCCAGGCCCCT------CCCTGGGCACAGTCTCTCACCTCCCATGAGGCTCCTTCTTTCTTGTACTGGACCTGGAAGATGCAAGCTATGTGTGAGTAGCTCATTTTTTCTTCTCTCCAGTGCAGGATGTAGCCATCTCTGCCCTTGGTCACGTTGAGGGTTGGGGGAGCCATCTGGACTGGAGGGAGGAAAACTTTTAAGGCATATTGTTTCTAATATTCCTCCAGTGGAACATTTCTTGTGTTCCATGCTCATCACAGATGCTCTCTCCATTAACCCAGAACCCCAGGTCCCACCCATCTTAGGGTCTTTGCACCC a score=13836 s mm7.chr15_random 3789898 605 + 7075849 GGCACACTCACTGTGGTTATAGCTCATGATGAACTTCCCTTGTTCCAGGTGCTTAACAGAGACTGTGTACTGGCTGTGTGCACTGGGCTCAGGCACAGGTAGACTGCAATGGTAGCGGGTGTAGACACTGGCCCCCGGCGGCTCCTTCACCACCGGAGAGCATTTCTCCTCCCTAGGGAAATAAGTTGAGCTGAGAGCAGGGTTGGGGGAATGTCAGATCCATCTAAG-------ACCTCA--AAGAGGTATGGT-----------------------------CCTGGGGA---------TAAGAAGAAACAAGGCAAGATGGACAGGGGACACTCACGGAGCTACAGGGCTGGGGCGATAGAAGAGCCCAAAGGAAACAGAGCCAGTCGTCTGGGTCCACACCTCCCAGGAGCAGTGGAGGGACTGGATCCCATCAAAGAAGCATTGAAGGTTCTGTGGCTGGGCCTTGTCCCCTGTGGC----AACATACCCTCATTCAGTCA----------GTCCACCCTCCCTCAATGGTTGGGGCACGAGGTTAATCACACAGAGGAGATCCTTGAGGGCAGCAGACCTGGCTGTGACCATCA---GCCCACTGTGCTCTGAGCCTGCCTGCTGTGTGTCCCCAG--CTAGGGAAGAATCCAGTACGTCTGCGC s bosTau2.chr5 31271068 640 - 76426644 GGCAAACTCACTGTTGTCTGAGCTCTTTATAAGTCTCTCTTCCACCTTTGGTCGAACAGAGACGATGTACTGGCTGTAGTTCCTGGGGTCAGGCACAGGAATCTGGCATCGGTGCTGGATGTAGGGGCTGCCA------GTCTCCTTCTGCACGGGAGAGCATTCTTCCTCCCTGAGGA-----TCATGGCAGAGGTCAGGGCAGGGGGA--GGCAGGGCCATGTGAGGGGTGAGACCTCAGGAGGAGCTGTGGCTTCTGCTGGGCTCCAGGGGCAGGAGGAGGCCTGGAGAGGGTGAGGCTTAGAGGAGGGGAGAGGACAGAGGCAGGGGACACTCACCGTGCACTGGGGCCGGTCTTGTAGAAGAGGGTGAAGGAGACGGAGTGGGTTACCTCGGACCTCACTTCCCAGGTGCAGGTAAGCAGGGTGGCCCCGTCAAAGAAGCACTGGAGGTTCTGAGGCTGGGCCTCATCCCCTGCGAGGGAGAACAAACCCTCCTTCAGTCCTCCTTCATTCATTCCCTAGCCTTCAGTGGGCTCACCATGAGACTCGTCACAGAGAGA------TTGTGGG-----------GCCAAGAACATCAAGGGTTAAACTCAGCCTGA-CCTGCCAGCCATGTGACCTCAGGTCAGAGGGTGAATTCTGTGAAACTTCAC a score=15931 s mm7.chr15_random 3790675 631 + 7075849 GGCCCAGAGAGACTACGGGGGACACAGGGCTGGTGGGAGGCTCCAATGTCGAGGTAGGGCAGATCCTGGAGCCTTACTC-GGACCTAGACTG---TCCCCACTTCTAGTCTCCTAAAAGGGGCATGTCCTCCCAGCTCCATTACCTGGCTGGGAGTCCCAGTGAACCTCTGGGCTCCATCTGCTGGGTCTCCCAGACAAGCTTGAACCCGGGGACAGCCGAGTGCGCACACGGGCAGCATAGATGCTGTTGGGTAGGAATAGCTTTGGCTCGAAATTCACCTGAAATTTGCTAGTGTGGAGACTGTAGGCATCCTGTGGAGATATGGGAGCTGAAGGAG--GAACCTGACATGCC--ATCACCCAAGGGT---GGACACAGACGGCTCAGGGTCCTACCTCCCAGGAGTCCTGAAGCCGCTTATAAGCCACCTCAAACTCTATGTCCTTTGATGAAAGCCAGGAGACCTGGGCATCCCCAAGGGACACACTCCACTCCAGCAGGAAACGATCCTCAGAGGAGCTGATGCTGACGTTCTTGGGAAGTGGTGGCTGCACTATAGAGA-GGGAAGCAGAGGGTTAATCGGGTTGCACACCGAGGGAGCTG--CGGGTGGCCTGGTGATCTGGGTGCCACTTTGGCTCA s bosTau2.chr5 31271943 601 - 76426644 GGCCCAAGGAAGCCACTCTGAACACAGAGC--ACCCGAGGATCC--------TGTTGTGTGTACACTGGACTCCTGTCCTGGAGATGTAATGAGCTCCCC--------TCTCCACAAGGGAGCAT--TGTCCCAACTCTGTCACCTGGCTGGGAGTTCCAGGAAACCTCCTGGCTCCACTGGCTGGGTCGTCCTGAGAGCCCCGAGCCTGGGGCCAGCCTGGTGCGCACTCGGGCCACGTAGGTGCTGCTGGGCTGAAGGTCCTTCAGCTCCAAGATGGCCTGGGGGGACTTGGAGTGGATGGTGAGGGCATCCTG-GAGGGGAGAGGGGCTGTTGGAGCAGGGCCGGCTGGGCCGGATC-CTTGTGGGTTTGGGGCACAGTTGG-TGGGGTCCCTACCTCCCAGGAGTCCTGAAGCCGCTTGTAGACCACCTCAAACTCCAGGCT------GGACAGCCAGTGGCTCTGGAAACCCTCATGGGCTATGCTCCAGAACAGCAGGAGACTCTCCCTGGTAGCAGTGATGTTGAGGTCCTTGGGTGTGGGGGGCTGCACTGGAGGGACAGGAAGGAAAGGGTC--------------CCTAAGGAGCTGGACGACTGTGCGGGAGGTTAAGGT-CCTCTGTGGCCCA a score=3299 s mm7.chr15_random 3791382 222 + 7075849 GCCTCCTCCTGCCCTGCTGTGCAC-----------TGATGCTTTCTGACCAGCAGACGGTGCTGTGAGCCAGGGAGCCTCTTCTCCTGCCACACAGCCTCCTCACAGTTCAAGTGCCTA---TCACT----GACTGTCCTTGCCCTGCATAAGTGTAGGACCGCCCTGATGACTTTCTTGGACTCCAGTTCCCAGACAGAAGCCTTTATCCTTCTTCTTGTCCCACTGCAGCTCATTGTA s bosTau2.chr5 31272748 232 - 76426644 GCTTCCTTCTGCCCCA-TGCCCACGAGGTGGCCTGTGGGGCCTCCTTCCCAGCAGAGGGCACTGTGACTCCTGTTACTCCCTCTTCAGTC-CACACTTTATT---AGTTCCTCTGCCCAGGGTCATCCTGCACCTCTCAGTACCCAGCAGACGTGTAT-CCTTCTCTGGAAACTT-CTTGGGTCCTCTCCCCAAGGCAGAATCCCTTGCTCCTTTTCCTGGCCCACCACA-CCCTTTGTA a score=5532 s mm7.chr15_random 3792647 212 + 7075849 TGCCTAGGCAGGACCTCCGCTCCTCACCATTCTGGGCAAGTGGCACCATGAGCTGGATGCCCAGATCACTATCTGGCCGGAAGGAGTAGTAGTCTTCGTTTGTGATGGAAAATCGTGTATAGGGGATGACACATCTTCTGGGCACACAGCGGTGGGATGACGGGCACTCTGACCACATGAGTTCCTCACTGAGCTCACAGGACACTGGCTGT s bosTau2.chr5 31273083 209 - 76426644 TGCTTGGCCAGGGACCCCAGGCCTTACCATGCTGACTCAGATTAACGGTGAGCTCAGTGACCAGAGGCTGGTCCGGTCGGAATGAGAAGTAGTCAAAGTCGGCAAGGACAAAGTTTCGGTAAGGAATAACACATTTTCTGGGTACGCAGC--CAGGACAA-GGGCTGTTTAACCAGGGCTTGTCGTCACTAAGACTGCAGGACACTCGCTGT a score=18910 s mm7.chr15_random 3795173 1998 + 7075849 TGGGCTCAGTGGCACTCACTTCTCTAGCTGGTGATAGAGGGTCATGTTGATTAGCCCCTGGGCATCCTCTGTGTCCGCCCAGCTGCAGATGATGTGGTTGGTGTAGTCATTGTAGCACTGCAGAGTCTTCAGAGGGACCGTTTCTGGCAAGGA--GAAGCAGAGGATCAGGAGAGCCAGCCTCTCCCCTCCAGGTGTCCAGGTGTCCCCATCCCCCTCACTCCTGTCCCACAGGAGTGTTTTTTTCAtttgtttgttttgagacagggtctttctatgtaacccaggctgtctgaaacttcctttgaaaaccatatagcgacaaa--ctcacagagatcctcctgcctctgtttcctgagggctcccattaaagacatgcacacaaagcccTGGTCTCTGGCTTCCTGCTCAGGCCCAGGTGACCAGGTAGAGG-GCCTGAGCCT---GGTGTGGCTGTGTGGTGGATCCTGTTGAGGACGTTCCTTTTCTGTCAGGAACATGAGATCCCAGTGGATTCTCAGC-CATGATATA------TGTTCTGTGCTGCACCTG------------CCCT-------CATGTAGG-GCATTGCTCAGGC-CTGACCCTGTTCTCTGAGGTGTCACTTGGCCATTACGGACACAGCAGTGCCTGAGA----AGTAGCTAGTATATCCCT----------TTCTAGGGTCCTGATCTGCTAAGCCTTTGCAT-----CTCTCTAAAGCTGG-GATTCGAAAG-AGAAAGTGGCTCCTA-CCTTGTCATGGAG---GAAATCCATGGGGCACTGGGAACAGGGCATCCCATA----GGGCCTCTGGATAGAGGAGA----------------AGGCTAGAGATATTTTGGGGACAGGTCTTT-----AGGCTGAAGCTCCCAAG--ACCAAGAATTAGGCGT----CCTGGC--AGTCCTTAAAGGAATGGGGGTGTGGGGG------AGAGGCAGAGAAGATGCTGG------CTCATTGGAGGTT-GAGGTTTTAGGGGATGCATTGAGTAATATGGCTGGAGAGGGACACCATTGAGCTGGATGCTCCAGAGCCAGACAAGGAGGACCAGGAATATGAAGAACAGGGAAGAGAGGGGCCAGGGGCACCCTCAAGGAGAGAAAGAATGTAGGAGAGA-CAGGAAAAACCAGAGCTGGATACAGTGGGTGGAGCTGCAGGGTTTCTGGGGGCTGCTGGGCTTATGGTGGGTTCAGATCCCACCAGGCTCAACACTAAAAAGGGAGATAAAGGGCAGGTGTCTTCAGACTTACCTTCTGCCTCTGTCACCCCGTGTCCCCAACAGAGAGCCACCAGTGCCATGTAGCACAGCCCCCATGTGAGTGCCATTTGCTGGTCCATTTTGGCACTTTTGGTGGCTGCACTGGA--------AGCTATGGGCAGGGGGGTG--TCCTCATTGTCCCGGGGTTCTGTATTGGTGCTTGGCTGGGGGTTTGGCTCCACTCATCTTA-CAGGGCTTGTGATTCTTCC---CTCCTAGA--CTGCATCCTTTGTGGCTGTAAAAAGATGCGTAAGGCTGAGAGCTGTCCAGTACCCTGCGATGCCAAGTGACC---TGAACCCAGAGAAGAGGCCCTGATGC----ATGCTGCCCTAGAGCTGT----------------------TCCCTTCTCTTAAGCCTCATTGTGCTAAAGCAGGAACATAGAAGAGATGGATTGA-TGGCCTCTGAGGCAGCAGATCCTTCCTCAGACCACACT------GCAGTGTGGAGAGGTGAGAGTGAAG-CTGCTGTTAAGCTTGCACCAGGCCACATAGAGGAGCTGAGACCCACACCTTTGATGGATGTGGCCGTGGG-GTCGGGGCAAGCCTAG---GTGTGATTGCTCTCTTGT---TTCTGTCTGCACACACCTACCCAGCTATGTTCTCCAGCACAGGCAGAGCCTGGTGCTCTCCCTGCCTCTGCTTAGTTTACCATCAGGTCTCCCACAGGCCCCTCTG-CTTCCCAGTTCCCCTTTCTCT-----GAAGTCTGGGGATTTCCTTGT----TTTCATTGAGTTCTCTTGGGAAGTACCAG---AGTTGCAGAGCCATTGCTGTGACCCCTTCTCCTACCGGCA-----TTTGAAACTTGAGTCAAGATGCACA s bosTau2.chr5 31275553 1934 - 76426644 TGGGCCCTTCCTCACTCACTCCTTGGGCCTGCGGTAGAGGGTCACATTGACCAGTCGCTGGGCATCCTGGGTGTCCGCCCACCTGCAGATGATGCGGCTGGTGTAGTCATTATGGCAGCGCAGGGTCTGCATCGGGACAGTCTCTGCCAGGGAGGGAAGCAGAG-----AGAGGGTCACACCTTCCCCCTCAGACGTCCC-TTGTCACCACCCCTTGCA-----GCCCCTCCTGGGTGC----------------------------------------------------------------------ACAGCACTGCGAAGAAGTCTCCCAGAG----TCCTG-----------TAGAGGCTCC---TAGAGCC---CAGGCAAA-----GGTCCCCAG----------AGGCCTTGGCGG--GGGTAGGGGCGGCTGTCTCTGCAGGTGTGCAGGTGTAAGGGAGCCAGCTGTGGACCCTCTTGTCTGGGGAAAAACACAATATTCTAGTTGATTCAGAGCACGTGTCATGAGCCCCTGCCTTGCTCTGCTCCTGGAGGAGCAGAGTCCCTCCCACTACAGGTGGGCACATGCGTCAGACACAGGCCCTG-CCCCTGGG----CCCGTGG-----GCGGGCGCA-----GCCTGGGAGCAGAGGCACAAACCCACCCCTAAGGGGCCTACTCTGGGGACCT-CCCCACCCTGCTCTCGAATCAGGCCCCGCTAGGCCTGATGCTTGGAAAGTGGAGTGTGGTTCCCAGGGTTATCAGGGGAGCTGAGCTCTCTGGGAGCCCTTGGGGAGGGTGGCCAGTGGCCTGAGCCTGGGGTTGGGGGACATCTCAGCAGGGCCTTGAGGCAAGAGG------AGAGACACTCCCTCCCCCACGGCTGAGGGTCCCCAGGAGCAAAGGTACAGAGGTGAGAACTGGTCAAGACCCCCAGGTGCTGAGTGTCTGGGGGGAATGCAAGGTCAGACAAAGGACTGGAATGGCCAGCCAGGAGGTTAGAGGTCTGGAATGCCACACCGGGAAATGTGGACAGAGAA-------------------GCCTCACAGCCAGAGAGGTCTTTACAGGAGGCCAGAGAAGAATGAGCGGGAGTGCTGGGGG-------AGGGAAGGGAGGCCTCCAGGGAAAACCAGGAGAGAGAAGAGATGGTCGAGGGGAGGGAAG--------------------GCTGG---------GGGTCTGGGTTCTAT--GGCCCGGCAGTGAAAAGGAGG----------GGGGTGATCTGGCTCACCTTCAGCCCCTGTTATGCTGAGTCCCCAGCAGAGCACCAGCAGAGCCAGGGGGAGCAGCCCCTGGGTCAGTGTCATCTCGTGATTCAGCTCTGGAGAACAGGTAGCC-CGCTCGAGTGGGTCCACGTCTGGGCAAGGTGTGGGCTCCTCACTGTCCTGGAGTCTTGTGTTCCTCCCCTGCTGGAGGCTGGGCTAGACCCATGTCATCAGCTCTTGGGAATCCTCCTCTCTCCGGGATCCTGCCTCCTCCAGGCCTGTGGAAGGAAGCGTCAGCCCGTGGG---------ACTTGGC----CCACGTGGTAGGGCGGACCC--AGGAGTGGCCTTGCTGCCTGGCTGCAGCCCCACTGCTGCCTCAGCCTGGCCCTTGGGACCGTCCCTGCTCCTCAA-CTCAGTGC-CCGGGATGTGACCGCGAAGGAGACGCACTCAGTGGCCTCTGCAGATGTGGGTCCCCACT-GGGTCACACTGTCCTGGTAATGAGAAAATTCAAGACGGAAGCCTGGTATTGGATTTTTCCCC--CCACC---AGGTACT--GACCC-----------GGGGGAGTCACTGGGTGTTGGGGCGTGCTTCTCCCGTGGGAGTGAGCACGTGcacacaccctcaccacacacgcacacacacctgcacacacacacacaca-AGCCTGGTGCTCTCCCCACCT-TGTTCCATTTACC-TCATTCCTCCCACACTACCCCCTGAAATGCCGGTTCCCTTTTTTTTCTGCAGAAGGTTGGGGATTTCCTTATTTCATTTCATCCAG--CCCCCGGGAAGTACCAGGAAAGTAGAACAGAGAGGAGCGTGACTCCTTTTCTGTCCGTAAGACTGTCGAAAACTTCACTCAAGCTGCACA a score=721 s mm7.chr15_random 3797557 988 + 7075849 CATATACATCTCTACTCTTTGGACCCCTTGACTGCAACGAGTGTCATTTTACCTCCATAATGCTCAATATGAATGAAGGAGGAACCAGGAAAGAGCATAAAATGATGGAATGTTCCATTGGAAAATGCTAAGATGATTGAATAACAACAC-ACACAAAT---CCCAAACCTCTGTCTCACAAGCCTCCCTATATGTGAGGTTAATTAAAAAGTCCCAT-------GCTAAATCACATCAAAC-------CTTTGCTGCTG-GTGCCCTTGAGCTGTCAACCTTACAAGTAACCAAAAG-ATTCTGTGACAAAGAGGGATGAAAGGGTTTGCAGCCAACTG------CCTGCCTTTCATAAAGCCAACAGAGTCACCAAGTAAGGGGGGAACAAAACAGATGTATCAATGACCAATGTCTTCATTGGGAGGAGgctgtcacaaaagaccacccatagttcatagaaaccacagacatttatttcttgagtttctggaaagtggcaaggccaaggtca-aggcacatgcaggtttgaggtcagatgagacctcttcctcataggcttttctggctgctactgccacagtggaggcatcaagggagcgtcctgggatgtctaatagaaggacaccagtctcCTGTATCCTCCCCCTGGGAAAGTAGTTTCCACATAAGGGTTTTGGGGTGCACGAGTATTCAGTCCCTAACAATTGAAATCATGGAGAATAAGTTATTATCTACTGTAAAAGACAACAGAGCTGTGTCATCAAACACCTACAGCAGAGTATTTAAATACACACAGAGAATCCATGAGCAGGCGCCTGAGGTTTAATGCCCACCATC-AACCAGTGTGCAAAGCGCTTTGGGGAAATCAATGCATCTTGATCAAGGCAGCTGTGAGAAT-----CCttgcagac-aggaaac-ggtatagggatgtggagtgatgggccacagtgccacagctgtgtgaggcaggctgggacag-agcccaggtgggttggctgaggacccgccctct s bosTau2.chr5 31278614 706 - 76426644 CACACACACAGCAAATCAGTGGACATACTGATTAGACGAACTGTA--TTTCTCTAGAGAATGTACTACGTGA-TGAAG-AGGAACCACAAAACAGTATTAAGTGATGGAAT-----aataaaaagtgttgaaacaattgaataacaacataaaacatatcagcctaaatccctaccttacaccattccccatgtatcaaatcaatgaaaaatgtaaatataggcagttaaatcctatgaaacttgcaaactgtacaagtgaatatctttgaactatttaagtttcaaagcactagaagaaatcaaagacaaaggctgagaaataaacgtgcataaaagtgaacacttcagtattttataaaaataactgaaccacaaagcaaagg----acaaa--------gtgaaaaataaatgtttgtgccagaagtatggag-aacaagtgactacctttatgctataaatagttcaaaca-----------aatt-------aatGGCA--TCCAAGGACACAGGCATA---------------------------------------------------------------------------------------------------AAAGACACC---------------------------------TACATGCAGAGAATTC-----------GTATt-agtggctaacaatt-----------------------------------------------------acaaaacactta----------------------------------------------------------ccatcatctggccactgttcaaaaggctttacagatattaatac------atcaatgtgtaggttaaaatctccactttgtagatgaggaaactggtata---------------ggtccatgatgatacagcagaaaggaaaaggctgagactgtagcacaggagattggctttagaatctgtgttct a score=7888 s mm7.chr15_random 3798566 687 + 7075849 GTTGTGTTTCCTGATCGTTGGTGTCCTATGTCTGCCCCAACTCAGACTGCTCTGCCATACTTATATTGACCAGACAGAGCCC----------------------------AAGGCGA---GAAAAGTTGAATC-TCTGAGCTTGTAT-CCCTTAGTTACTGCAGAGCCTAAAGCTATTTAAACACAGACTGCTGTTGTaaaaacaaaagcaaaaacaaaaaACAAGAAGTCCTAAGAT---AGGAGACTCGGGATTTTA--------------GAAAGATCAGTG---------------------CAATGATGAGTGACACCACAGAATAGACACCACAGAGAAGAACCCAACTGAGGGGGATGTGCAAAAATGGGGATAAGGACAAGGCAGGGGACACTCTCCAGAACACCGTGGAAGCACTGGAAAGGGGAACAAG-------------------------CTGAGGATCAGGGATATGCATGGCCAGCAGTGGCAGCTTCCCTCACTGT-CCCTTGCCTTTTGG------------------------GGATTATTTTTCACAagaataaaagtaataataccttttactctctcctgccactaggcagggtcacttgattaaatgctgtccaaggagccatgag-ggaagccctgtacgtatctttccgaaaga-ctacttaaaaggcat------ggtaaaagg--tccgtttgtcttcacttttttcttttctttcctatatctcagaaaggacggttggcactccagtcaccattttggatcacaagg------aaaggacggaagccacatgcAA s bosTau2.chr5 31279349 787 - 76426644 GTTATATTTCCCAATTATTGGTATCGTACATCT-------------CTATTCTGACA----TATACTGACCCAACAGACACTTCTACAGATATGCACAAATGTCTGTGCAAAGACAAAACAAAACATTGAAACATCTTAAGTAGCATGCTCAGGGAGATTTGAGAAATCATGGCCATTTAAGAACAGATTGCTATGCAAAGAACAAA---TAAAAC--------AGAGTTCTTAGCATTTGAAGGTAATTGAAATTTTATTGAAGTTTTATTGAAGAAATCCATAAAACAAACACACACCATGACTCAATAATGGGCCAAAT--CAGAATTAACACTATAAACTGTCATGTTACAAAGGTAGATATTGAAGAC--AGCATATAGGCTAGGAAATGAAAAGTCT-TAGAGAAAAATTGAGGCCTAGGAAAGAAATTCAAGAGTTCCAACATCTAGAAGCAGAAGACAGAGAACTGAGGGCAGGTACGGCAGATGGTGGC-GCTTGCCTAGCTGtcccctttccccttggtaacgaaaggttaggttctacctaggtttattgctgcacagaataaaag--attttgtttcttacactctcctattgctaggtgtggtcatgtgactaaatgttgtccaagaagatgtgagtagaatcattgtgtgtgtctttcaaaaaaagttgcttaaaggaagtggctcaggtaggaggaatctatttttgccctcctgctttttttcctttctccagttt-gcagtgatggctggagttccagcagtcattttgaattataaggttctgttgagtataggagtcataagcaa a score=17419 s mm7.chr15_random 3807319 1000 + 7075849 CCACAACACTGCAGATCCTCATGTCCAGACACCAATGGGTTTGTTTTACTTCATATTTTCTTTTATTCAACAGAAAACGAAAGTCAAGAAGTTC----GGTGGCTG------ACTTGTCGCGAG--GGGTGCAATCCATGGGGCACACGGCAGGTGTTTTGGTTCACAATGGTGTTCA-TTAGGTACTTAGTCAACCCTTTCTCCCCGTGCAGTAGCTATGCCATAGTC-ATGGCAGCAAACGACACAGAGTATGAATTGTGTGGTACCTATGAGAGGCTCTCA--TGGAACAGGGGATACTAACACAAGGCAGGTGGT---CTCTGTCTGATAACTGGATCCACCC-TCCTATGTGGCCTTGAAATTCAGAGAGATTAGTATCTCCTCACACATTGCATAACCATTTCTCCAAATATCT--TACTGTTTGAGGAAATTGACACATCACCCAGACAGCCCTTGAAATCAATG-------CATAAATGGTCATGTCCACCATCCCCACCTACACG----GGACACCCCGG--ACATGTAAAACTGACAAGAAATC-CTTGATCCTCAGATCATACAGCAGGAACAA-----CATGTCTTGTTGGACAACCTACTACTCTTTGGGATCAGTGTCACACTAGGGCTCAATAGGGTCC------------------------------------TTGTCACCAACCTCCTGCTACTTACTTTATATAATACCCATTGCTTTCTTAACACAGAC-TGTCCCCAGATAAATGTGCCCTTGCCCCAAGGGAGCCA---TTCTCACTCGATTTCAGATCTCAACTCAAAGTGAAAATGAACACAGCTAGTTAGCAGCCCAAAAGGCCATTAAGAAGGACTTCCCACAGAACAACATTGGTAAGATATGACTAAGCTATCCAA-ATGTTTACAGGTCACCTT-TTAAACTGGAAGTCCCTGGCATATTTATGCAGTGTATCCTATGCTTTGGAAATTAGAGCCTTGGAAACAGTACCTGTCTCAAAGCAATAGATATACATATTA-ACTCTACC-ATAATTTATACAAGTGAAG------TTTTAAATATGTTTCCATAT s bosTau2.chr4 34027195 1059 - 69556449 CTATAACACAGAACATTTT-ATTTTTAGACATCAGTGGGTTTGATTTTGTT-ACATTCTCACTTATTCAGCGAAAAACAAAAGTCAGGAAAATCCCATGGTGACTAGTAGTAACCTATCAGGAAATGAGAGCAAGC-ATGTAGACCAT--------TCTTTGTTTGGATTGATGTTAAATCAACTGATCAGTAAAGCCTTTCTTTCT----AATAATTAGGACAGATTCCGTTGCAAAGAGTGTTG--GACTAGGAGTCCTCTAGAAAT----AAAGGCTTTCACTTTATACATGGAATAGTCACAAAATATAGATAGCTTACTTTGACT--CAATTGGATTTGTTCATCCTAAACTGCCATGAGATTCAGAGAAATGGGTATTTTCTCGTATGTTGTGCAACAGTTTCTTCAAATATCTGCTCATGCCCAGTTAAACTAACAAGATATCCAGACACTCCATCATCTCAGTGTGGGACACAGAGGTGGCCACATCCATCATACACACATATATAATTAGGAGACTTGGGGAATATGCTAAGAGGGCAAGAAATCATTTGCTTCTTCGGTTATGCTTTAGTGACAAATATACATTTCTTGGTAACCAGCCAATCAGT-TTTGGAAATAATATCAGACCATGACCCAGTAAAGTCCAACAGCCTATCCCTTGCTTACATGCACCATTAAAGCCTGTCGCCAATCACCAGCCATCTCTCTCAGGCA-TACTTTCCTTTCTCTGGAAGCAGAAATACCCCAAAATAAATTTGCCCTT-CTCCAGAAAAAACACACTCCCCATTCAACAGCAAATCCTGATCCAAAGAAAAAATTAATTCAGGCAG---GCAATTTT---GATCTCTTAGAAAACTTTCCTTAAAAATGACAAATGTGTGTGATGGTAAAGCCATCCAATATGTCTGCATGCTGCCTTATTAAATTAAAAACACTTGATTTATTTATACAATGTCTTCAATGGCTTACAGATTAGGATCCTAGAAACAATACATGGCTTATAGCAAAAAATATACATATAAGAATCCACCTATAGTTTATATAAATGATGAAATGCTTCTGAatatatctatatat a score=10072 s mm7.chr15_random 3808812 288 + 7075849 ACATACACCGATATGCTC-ATTCATGACTCTTCAGAATCAG---GCA-----TACAGCCCTTCCTTAGCTCTTACCCCTCAGTGTCTAGGACACAGCTTTTCAAGTCTTAATGGCAGGAAGGAACAAAGCTTACCATTGAGGGCAAAGGGCAGGCATGATGCTCCTTCTATTCTGAGGAAAGCATGTTTGCT---------------GCAGCTCAGCGCTTGCTGCCAGGATCAAGCTTATTCCAGCTGTCACAGGTCTAAACACA-CCCAGGACACAGGTACCACACACAGCACTGTGCTCACATGGGGCAG s bosTau2.chr4 34028260 308 - 69556449 atgtacacatatataCTCTGTGTGTGTGTTTGCAGAATCAGCACACAAATACTGCAGTCTTTCATTGGCTCTTCCACTTCAGTGTCAAGGACACTAGGTTCAAAGTCTGAA----GGAACGGAACAAAGGTCACCGCTGAGGACAGAGGACTGGCTTGATGCACCTTCCTTTGTGAAGGAC-CAAATTTGCTGGGCAGTGACACCCAGCAACGCACGGCTTATTGCAGGGGCCGATCTCATTCCAGTTGTCACAGGTCTTGGCACATCCTGGGCCACAGGTATCATACACGGCCCCATGCTTACACTGGGTGG a score=5020 s mm7.chr15_random 3809897 141 + 7075849 CATCCTGGAATAATCTAATTGTCAAACATGCTCACTTTAAAGCCCTCCGAGGGAGCACCCATGGGAGATC-TTAT-ACTTGAGACCTCCGAGTCTCTGTCACATCCACCAGGTTGGGAA-----CTTCTCACACACCACAGCAGAGCC s bosTau2.chr4 34140000 146 - 69556449 CATACCCGGAAAATCTTGTTGCCAAACTTGCACACTTTGATGTCTTCCTGGGG--CACTCGTAGGAGGCAGTCATCACAACAGGCCTCCTCGCCTCTGTCGCAGCCACCAGGGTGGGAGCACTTCTTCTTACACACAACAGTGGAGTC a score=3411 s mm7.chr15_random 3810038 146 + 7075849 TCTGCAGCAGCATGCTGAGCAGTTAACAGGGAGAGATGGGAATCTGCTCTCTGGAACATCCCTGGGAAAAG---AGCTCTCCAAAGGAAGGCCAAAGTTTTTATTTTCTGATTGTTTAGTAAG--------GCAGAGGGAGAGC---ACAGCAGTCAGGA s bosTau2.chr4 34144843 155 - 69556449 CTTGCAGGTACATGCAGTGCAGTTATCATAGAGAAAAGAGGATCCATTGTCATAAACATCACTGCGAAAGAGGCAGCTTCCAAATGGGAGGTCAAA-----CACTTTCCTTTGACCTAGAAAGAAGCAACAGCATAGCGTTAGCAAGACAGAAGTCAGGA a score=3445 s mm7.chr15_random 3822227 104 + 7075849 AAAATAAAATCTTTGGCCTTCCTTTGGAGAGCT---CTTTTCCCAGGGATGTTCCAGAGAGCAGATTCCCATCTGTCCCTGCTAACTGCTCAGCATTTAGCTGCAGA s bosTau2.chr4 35411499 107 + 69556449 AAAGGAAAGTGTTTGACCTCCCATTTGGAAGCTGCCTCTTTCGCAGTGATGTTTATGACAATGGATCCTCTTTTCTCTATGATAACTGCACTGCATGTACCTGCAAG a score=5031 s mm7.chr15_random 3822331 141 + 7075849 GGCTCTGCTGTGGTGTGTGAGAAG-----TTCCCAACCTGGTGGATGTGACAGAGACTCGGAGGTCTCAAGT-ATAA-GATCTCCCATGGGTGCTCCCTCGGAGGGCTTTAAAGTGAGCATGTTTGACAATTAGATTATTCTAGGATG s bosTau2.chr4 35416303 146 + 69556449 GACTCCACTGTTGTGTGTAAGAAGAAGTGCTCCCACCCTGGTGGCTGCGACAGAGGCGAGGAGGCCTGTTGTGATGACTGCCTCCTACGAGTG--CCCCAGGAAGACATCAAAGTGTGCAAGTTTGGCAACAAGATTTTCCGGGTATG a score=9655 s mm7.chr15_random 3823269 288 + 7075849 CTGCCCCATGTGAGCACAGTGCTGTGTGTGGTACCTGTGTCCTGGG-TGTGTTTAGACCTGTGACAGCTGGAATAAGCTTGATCCTGGCAGCAAGCTCTGAGCTGC---------------AGCAAACATGCTTTCCTCAGAACAGAAGGAGCATCATGCCTGCCCTTTGTCTTCAGTGGTAAGCTTTGTTCCTTCCTGCCCTTAAGACTTGAAAAGCTGTGTCCTAGATACTGTGGGTTAAGAGCTATGGAAGGGCTGTA-----TGC---CTGATTCTGAAGAGTCATGAAT-GAGCATATCGGTGTATGT s bosTau2.chr4 35527881 308 + 69556449 CCACCCAGTGTAAGCATGGGGCCGTGTATGATACCTGTGGCCCAGGATGTGCCAAGACCTGTGACAACTGGAATGAGATCGGCCCCTGCAATAAGCCGTGCGTTGCTGGGTGTCACTGCCCAGCAAATTTG-GTCCTTCACAAAGGAAGGTGCATCAAGCCAGTCCTCTGTCCTCAGCGGTGACCTTTGTTCCGT----TCCTTCAGACTTTGAACCTAGTGTCCTTGACACTGAAGTGGAAGAGCCAATGAAAGACTGCAGTATTTGTGTGCTGATTCTGCAAACACACACACAGAGtatatatgtgtacat a score=18191 s mm7.chr15_random 3824031 963 + 7075849 TATGTGTATCTATTGCTTTAAGACAGGTACTGTTTCCAAGGCTCTAATATGCAAATCACAGGACACACTACATAAATAAGCCAGGGATATCCAATTTAA-AAGGTGACATGCAAACAT-TTGGATAGCTTAGTCATACCTTACCAATGCCATTATGAGGGAAGTCCTTCTTAATGGCCTTTTGGCATGCTAGCCTGTGTTCATTTTCACTTTGAGTTGAGATCTGAAATTGAGT-GAGAATGGATCTCTTA-GGACAAGGGTACATTTACCTGGGGACAGTCTGTGTT----AAGAAAGCAATGGGTGTTTAAAGGAAGGAGCAGGAGGTTGGTGACAA------------------------------------GGACCCTATTGATCCCTAGTGTGACACTGATTCCCAAAGAGTAGTAGGTTGTCCAACAAGACATG-----TTGTTCCTGCTGTATGATCTGAGGATCAAG-GATTTCTTGTCAGTTTTACATGT--CCGGGGTGTCC----CGTGTAGGTGGGGATGGTGGACATGATCATTTATG-------CATTGATTTCAAGGGCTGTCTGGATGATGTGTCAATTTCCTCAAACAGTA--AGATATTTGGAGAAATAGTTATGCAATGTGTGAGGAGACACTAATCTCTCTGAATTTCAAGGCCACATAGGAC-AGTGGATCCAGTTATCAGACAGAG---ACCACCTGCCTTGTGTGGGTATCCCGTGTTCCA--TGAGAGCCTCTCATAGGTACCACACAATTCATACTCTGTGTCGTTTGCTGCCAT-GACTATGACATAGCTACTGCACGGGGAGAAAGGATTGACTAAGTACCT-AGTGAACACCATTGTGAACCAAGACACCTGCCATGTGCCCCATGGATTGCACCC--CTCGCGACAAGT------CAGCCACC----GAACTTCTTGACTTTCGTTTTCTGTTGAATAAAAGAAAATATGAAGTAAAAACAAACCCATTGGTGTCTGGACATGAG--GATCTGCAGTGTTGTGGATTAGAAGTATAAGATT s bosTau2.chr4 35528253 1021 + 69556449 TATGTATATTTTTTGCTATAAGCCATGTATTGTTTCTAGGATCCTAATCTGTAAGCCATTGAAGACATTGTATAAATAAATCAAGTGTTTTTAATTTAATAAGGCAGCATGCAGACATATTGGATGGCTTTACCATCACACACATTTGTCATTTTTAAGGAAAGTTTTCTAAGAGATC---AAAATTGCCTGCCTGAATTAATTTTTTCTTTGGATCAGGATTTGCTGTTGAATGGGGAGTGTGTTTTTTCTGGAGAAGGGCAAATTTATTTTGGGGTA-TTTCTGCTTCCAGAGAAAGGAAAGTATGCCTGAGAGAGATGGCTGGTGATTGGCGACAGGCTTTAATGGTGCATGTAAGCAAGGGATAGGCTGTTGGACTTTACTGGGTCATGGTCTGATATTATTTCC--AAAACTGATTGGCTGGTTACCAAGAAATGTATATTTGTCACTAAAGCATAACCGAAGAAGCAAATGATTTCTTGCCCTCTTAGCATATTCCCCAAGTCTCCTAATTATATATGTGTGTATGATGGATGTGGCCACCTCTGTGTCCCACACTGAGATGATGGAGTGTCTGGATATCTTGTTAGTTTAACTGGGCATGAGCAGATATTTGAAGAAACTGTTGCACAACATACGAGAAAATACCCATTTCTCTGAATCTCATGGCAGTTTAGGATGAACAAATCCAATTG--AGTCAAAGTAAGCTATCTATATTTTGTGACTATTCCATGTATAAAGTGAAAGCCTTT----ATTTCTAGAGGACTCCTAGTC--CAACACTCTTTGCAACGGAATCTGTCCTAATTATT----AGAAAGAAAGGCTTTACTGATCAGTTGATTTAACATCAATCCAAACAAAGA--------ATGGTCTACAT-GCTTGCTCTCATTTCCTGATAGGTTACTACTAGTCACCATGGGATTTTCCTGACTTTTGTTTTTCGCTGAATAAGTGAGAATGT--AACAAAATCAAACCCACTGATGTCTAAAAATAAAATGTTCTGTGTTATAGTAAATAAAGAGCTTAAGTTT a score=11605 s mm7.chr15_random 3825200 1319 + 7075849 TTATATTTTTACGCTTATTTGCTTGTATTT-TTACCATATTAAAAAAATTACTCATGCCTATGAC--AGGGTTTTGGTGTCCCCATTGACTTTTTT--CCTGAGGGAGTGTCTTACTT------CCCTCCTCTTAACCC---------CAGCAGCCTCAAGTTattcattttttcattcattcattcattcaCTATACATCCAGTCATGAAAA-CCATCTCTGAGCTATGG------CTGGGCACTGGGGGAGGAGAACAGA--CACAAAACATCACTTGCTCTGATTGCAAGATGGGAGAAGATGACAGGGA--CTCTAGG---GCAGGACAG---AGAAGGGAAAGC-CAAAGCTGACAG---CCAGGG--ATCAAGACTGCTCCCACTGCCTACTGACTG------------------TTGTCAACTTAGGTTTT---CCATGACAAAAGCATAACCCTCAAAAACCCTTCTGGATTT-TAGGTCCTTCTAGAAAAATACCCCAAGAGTT----CCCAAGGCTTTATGAGGCCACCTGTAGCTGATTTGCATAAGGCCACATGCTGAG-AAGTGGTGCCCTCCAAGTCCACCCCAGCTCTACCTGGCTCTGGGCACACACTCGCAGGGAGGTGGTTATTGCCCTCTGTGTCTGCTTCCTC--CAGAGAAGTCAGGGAGGTGGGTGTGGAGGAGGCCATTCCAGGCTGAGACCTGA-AGGGCACATGAGAGCTGATGTGGAG-----ATGGTGGGGATCGAGCTACT----------------CTGGCAGAACTAAATGTCGTGAGTCTTA----------TCAGAGGCTAGTGTCCACAATTCTGAGAAGCAAGCAAAGCTGCTTGTGAAAGGGCACTGGCA----------------------ACTTCCTCAATCTGC-TCTCTGTTTCCTCCAGATGGGGCACAAATAAATAGGAAGAGCCTG------CAGCTCACTGGCACTTGGAGGCTCCCGAAGGAGGCTGCCTGTCGCCCAAGCACAGAGGTAAGTGGCTTCCTGATACGGAGCTAAGGATGGGCGC-AAAGCAGGGGC-TGTGAGGGTCTCCAGGGTGGAAAAGGACAGCATAAGACAGGG--------CTGGGGTAGCATATTCCTCAAACTTG--------------ATCTCTCTAGAAAGACTAGGTCTCAGACTCCAAGTCAGTGAGTAGAGGAGGGGCATGCCGGAACATTGGAGCGGGGAACAA--AGTCAGGGCTCTGGAAGAGGTACGGTTAGGATGTTCTCTGGGGCTCTGCGATTCTGGGGTTCTGGGAGGACACAGCTTTATCACTGGAGG----------CCTGGTGGCAGGGAGGACTCCCT--------GAAAGCTC---TATGTGGGGCTAACTACTGTGTTCC----TTCTAACTTTGCCACCCATATGTTACT------------TCAGT-------CCCTATCCTGAGTTTCTGGTCACACATCTGTGGGACAAGGTGAGTG s bosTau2.chr5 45140843 1395 + 76426644 ttatatatatatatatatatatatatatatattaaaaaataaataaaacta-tcatattgattactgaggatttgggtgccacc--tgaacttttgagcccaaggagatgccacactcacttggccttcatcttggccctgCTGTGCTCAGGGGCCACTCACcattcacttgttcattcattcattcatCTGttccacacacggttgttaagggccccatctgtgccagggagcatgctgggtactgaggagagaaaaggagttcacaggacagT-----------------GTTGGGGAAAGACAGCTGTGAGCCCCCAGACTTGTGGGACAGTGGAGGAGGGCAGGTACAAGGCTAAGGGGTCCCAAGGGAATCAAAATTGT----ACTGGCTAACGCCTGGGGGTCTCTTGTACCAGGCTTTGAGCTAAGGTCTTGCCCTGTGACA----------TTTCAATGGCCCTTTGATATTTACAGATGCTTGT-------TAAGTCAAGAGGTAGGTCCTGAGCCCTGGTGAAATTACATGCAGGTAATTTGCAGAAGATCTCACCCTGAGCAGGTGG-------CAATGGGAGGCCAGGTTCCTGTGGCTCTGAGCTCTCACCTGCTCTGGG--TGTTGTAGCCCCCTCCCCCCGCATCCCCTTCGGGGGTGTCTGGGAAGGCTGCATGAAGGA----ACTTTGCACTGAGCAGAGAGAGCACACGTGGAAGTTTATAGGGAGATCACATAGAAAAGATTGAAGTACTTCTAGAAGAAGGAACATTGGCAAAGCCAGA------AAGGCTCAGAATAAAACTTCATATCTTGGTGTCCACAATTCTGAGAAACCAGGCAA---TCTTGTGAAGAGGCACTTGTACAGAAAGAGGCCAGGGACTGCCGCTTCCTCTTTCTGCTTCTCTGTTTCCT---AACAACGTCAGCATAAATAGGA--AGCCTGAGAGGCTCGCTGACTGCCTCCAGGAGACACCACAGAAGGTCCGTCTGTC-CCGGCACAAAGAGGTACGTGTGGGCTCGGCGCAGGGTGAAGGGTGGGGTCGGGAGCAGGGGCGTGTAGCAGTCT---GGGATGGGAAGGACAGGGAGAGCCTGGGGGTGTCAAGTGGGCAAGTGTGCCCCAGGGACTTGGGAGGTTAGGGCTTGGCCTTTTGGGAAAATCTGAACCCAGACTCCTGGGAAGCCAGTGGACAAGGAGACAGAC----------AGCAGGGACAGACCAGTCTGGGTGTTGGGGGAAG-----------------------------GGCTTTGGGGGTCCAG------------TCCTCACTGGTGAATCTGACTGTCCTGTCAGCAGGGAAGATGCCTGGGGCGGTAGAGAGTTCAGGCCTGGGAGTCACACAGCTGTGTACCGTTGTCTTTACTTTGTCACTAAGGTGTCACTAAAGGGTTGGTGGCAGTGATAATATCCTGTCCTGGGCTTCT-GTCTCATGTC--TGGAACAAGG-GAGTG a score=5388 s mm7.chr15_random 3832729 248 + 7075849 GTGTGTGCTGTGTGCATCTTGACTCAAGTTTCAAATG--CCTATAG---GGTAAGGGGTCACAGCAATGGCTCTGCAACTGT---GGTACTTCCCAAGAGAACTCAGTGAAA----ACAAGGAAATCCCCAGGCTTC-----AGAGAAAGGGGAACTGGGAAG-CAGAGGGGCCTGTGGGAGACCTGATGGTAAACTAAGCAGAGGCAGGGAGAGCACCAGGCTCTGCCTGTGCTCCAGAAGAAGGTTGGGTGGGTGTGTGCAGAG s bosTau2.chr5 45149148 260 + 76426644 GTATGTG-TCTGTGCAGCTTGAGTGAAGTTTTCGACAGTCTTACGGACAGAAAAGGAGTCACGCTCCTCTCTGTTCTACTTTCCTGGTACTTCCCGGGGG--CTGGATGAAATGAAATAAGGAAATCCCCAACCTTCTGCAGAAAAAAAAGGGAACCGGCATTTCAGGGGGTAGTGTGGGAGGAATGA-GGTAAATGGAACA-AGGTGGGGAGAGCACCAGGCT-tgtgtgtgtgtgtgtgcaggtgtgtgtgcgtgtgtggtgag a score=14580 s mm7.chr15_random 3833069 1646 + 7075849 CCTGGTG------CAAGTCTAACAGC---------TCTCACCTCTCCACACTGC------AGTGTGGTCTGAGGAAGGATCTGCTGCCTCAGAGGCCA-TCAATCCATCTCTTCTATGTTCCTGCTTTAGCACAATGAGGCTTAAGAGAAGGGAACAGTTCTAGGG--------------------------CAGC-ACGCATCAGGGCCTCACTTGGCATCGCAGTGTCCTGGGCAGCTCTCAGCCTTACACACTTTTTTTTTTTTTTACAGCCACAAAGGATGCAG--TCTAGGAG---GGAAGAATCACAAGCCCTG-TAAGATGAGTGGAGCCAAACCCCCAGCCAAGCACCAATACAGAACCCCGGGTCAATGAGGA--CACCCCCCTGCCCATAGCTTCCTGTGCAGCCAC-CAAAAGTGCCA------------AAATGGACCAGCAAATGGCACTCACATGGGGGCTGTGCTACATGGCACTGGTGGCTCTCTGCTGGGGACACGAGGTGACAGAGGAAGAAGGTTAGTCTGAAGACCCCGCCCTTTATCTCCCTTTTTAGTGTTGAGCCTGGTAGGAGCTCTAACCACCATAAGCCCAGCAGCAACCAGAAACCCTGCAGCTCCACCCACTGTATCCAGCTCTGATTTTTCCTG-TCTCTCCTACATTCTTTCTCTCCTTGAGGGTGCCCCTGGCCCCTCTCTTCCCTGTTCTTCATATTCCTGCTCCTCCTTGTCTGGCTCTGGAGCATCCAGCTCAATGGTGTCCCTCTCCAGCCATATTACTCAATGCATCCCCTAAAACCTC-AACCTCCAAGGAG------CCAGCATCTTCTCTGCCTCT------CCCCCAGACCCCTATTCCTTTAAGGACTT--CCAGG----ACCCCTAATTCTTGGT--CTTGGGAGCTTCAGCCT-----AAAGACCTGTCCCCCAAATATCTCTAGCCT----------------TCTCCTCTAACCAGGGGCCC----TATGGGATGCTCTGTTCCCAGTGCCCCATGGATTTC---CTCCATGACAAGG-TAGGAGCCACTTTCTCTTTTCCAAGC-CCAGCTTTAGAGAGA----GGCCAAGGCTAAGCAGATCAGGACCCTAGAAAGGGATATACCAGCTACTTCTCAGGCACTG--CTGTGTCTGTCCTACCAAGTGACACCT----------CAGAGAACAGGGTCAG-GCCTGAGCAATGC-CCTACATG-------AGGG------------CAGGTGCAGCACAGAACA------TATATCATG-GCTGAGAACCCACTGGAATCTCATGT------CCAGACAGAAAAGGAGCGTCCTCAACAAGATCCACCACACAGCCGCACC---AGGCTCAGG-GCCTCTACCTGGTCACCTGGGCCTCAGCAGGAAGAGACCAgggctttgtgtgcatgtctttaatgtgagccctcaggaaacagaggcaggaggatctctgtgagtttgtccccagcatggtcttcaaaggaagtttcagacagccttggttacctagaaagaccctgtctcaaaagaaaaaaaAGACATTCCTGTGGGACAGGAGAGGGACAGGGGACACCTGGACACCTGGAGGGGAGAGGC-TGGCTCTCCTGATCCTCTGCTTC--TCCTTGCCAGAAACGGTCCCTCTGAAGACTCTGGAGTGCTACAATGACTACACCAACCGTATCATCTGCAGCTGGGCAGACACAGAGGATGCCCAGGGGCTAATCAACATGACCCTCCTCTATCACCAGCTAGACAAGTGAGTGCCACTGAGCCCA s bosTau2.chr5 45149477 1614 + 76426644 CCTGGTGGGGGGAAAAATCCAATACCAGGCTTCCGTCTTGAATTTTCTCATTACCAGGACAGTGTGACCC-AGTGGGGACCCACATCTGCAGAGGCCACTGAGTGCGTCTCCTTCGCGGTCACATCCCGG-GCACTGAG--TTGAGGAGCAGGGACGGTCCCAAGGGCCAGGCTGAGGCAGCAGTGGGGCTGCAGCCAGGCAGCAAGGCCACTCCTGGGTCCGCCCTACCACGTGGG---CCAAGTCCCACGGGCTGACGCTTCCTTCCACAGGCCTGGAGGAGGCAGGATCCCGGAGAGAGGAGGATTCCCAAGAGCTGATGACATGGGTCTAGCCCAGCCTCCAGCAGGGGAGGAACACAAGACTCCAGGACAGTGAGGAGCCCACACCTTGCCCAGA------CGTGGACCCACTCGAGCGGGCTACCTGTTCTCCAGAGCTGAATCACGAGATGACACTGACCCAGGGGCTGCTCCCCCTGGCTCTGCTGGTGCTCTGCTGGGGACTCAGCATAACAGGGGCTGAAGGTGAGCCAGATCACCCC---------CCTCCTTTTCACTGCCGGGCC-----------------------------ATAGAACCCAGACCCCCAGC--CTTCCCTCCCCTCGACCATCTCTTCTCTCTCCTGGTTTTCCCTGGAGGCCTCCCTTCCCT-------CCCCCAGCACTCCCGCTCATTCTTCTCTGGCCTCCTGTAAAGACCTCTCTGGCTGTGAGGC-------------------TTCTCTGTCCACATTTCCCGGTGTGGCATTCCAGACCTCTAACCTCCTGGCTGGCCATTCCAGTCCTTTGTCTGACCTTGCATTCCCCCCAGACACTCAGCACCTGGGGGTCTTGACCAGTTCTCACCTCTGTACCTTTGCTCCTGGGGACCCTCAGCCGTGGGGGAGGGAGTGTCTCTC------CTCTTGCCTCAAGGCCCTGCTGAGATGTCCCCCAACCCCAGGCTCAGGCCACTGGCCACCCTCCCCAAGGGCTCCCAGAGAGCTCAGCTCCCCTGATAACCCTGGGAACCACACTCCACTTTCCAAGCATCAGGCCTAGCGGGGCCTGATTCGAGAGCAGGGTGGGGAGGTCCCCAGAGTAGG------------CCCCTTAGGGGTGGGTTTGTGCCTCTGCTCCCAGGCTGCGCCCGCCCACGGGCCCAGGGGCAGGGCCTGTGTCTGACGCATGTGCCCACCTGTAGTGGGAGGGACTCTGCTCCTCCAGGAGCAGAGCAAGGCAGGGGCTCATGACACGTGCTCTGAATCAACTAGAATATTGTGTTTTTCCCCAGACAA-----GAGGGTCCACAGCTGGCTCCCTTACACCTGCACACCTGCAGAGACAGCCGCCCCTACCC--CCGCCAAGGCCTCTG------GGGACC-----TTTGCCTG---GGCTCTAG---GAGCCTCTA-----------CAGGA----CTCTGGGAGACT-------------TCTTCG--------------CAGTGCTGTGCACCCAGGAGGG-------------------------------GCTGCAAGGGGTGGTGACAAGGGACGTCTG---------AGGGGGAAGGTGTGACCCTCT-----CTCTGCTTCCCTCCCTGGCAGAGACTGTCCCGATGCAGACCCTGCGCTGCCATAATGACTACACCAGCCGCATCATCTGCAGGTGGGCGGACACCCAGGATGCCCAGCGACTGGTCAATGTGAC---CCTCTACCGCAGGCCCAAGGAGTGAGTGAGGAAGGGCCCA a score=5479 s mm7.chr15_random 3837134 223 + 7075849 CCTGACAGGATTCAATCA------GTGTCCTGTGAGCTCAGTGAG---AAACTCATGTGGTCAGAGTGCCCGTCATCCCACCGCTGTGTGCCCAGAAGATGTGTCATCCCCTACACACGATTTTCTAATGGAGATAACGACTACTACTCCTTCCAGCCAGATCGTGACCTGGGCATCCAGCTCATGGTCCCACTGGCCCAGCATGGTGAGGAGCTGGGGTCCTGCCTAGGCA s bosTau2.chr5 45153335 226 + 76426644 CCTGGCAGGGACCATCCACAGCGAGTGTCCTGCAGTCTTAGTGACGACAAGCCC---TGGTTAAACAGCCC-TTGTCCTG--GCTGCGTACCCAGAAAATGTGTTATTCCTTACCGAAACTTTGTCCTTGCCGACTTTGACTACTTCTCATTCCGACCGGACCAGCCTCTGGTCACTGAGCTCACCGTTAATCTGAGTCAGCATGGTAAGGCCTGGGGTCCCTGGCCAAGCA a score=28501 s mm7.chr15_random 3838775 1353 + 7075849 CCCTATAATCCTTCTGCTTCCC-TCCCTGTAGTGCAGCCACCCCCTCCCAAGGACATCCACATCAGCCCCTCTGGGGATCATTTCCTGCTGGAATGGAGTGTATCTCTTGGGGATTCCCAGGTCTCCTGGCTTTCATCAAAGGACATAGAGTTTGAGGTGGCTTATAAGCGGCTTCAGGACTCCTGGGAGGTAGGACCCTGAGCTGCCTGTGCCCT---CCCATGGGTGAT--GGCATGTCAGGTTC--CTCTTTCAGCTCCCATATCTCCACAGGATGCCTCCAGTCTCCACACTAGCAACTTTCAGGTGAATTTAGAGCCAAAGCTATTCCTACCCAACAGCATCTATGCTGCCCGTGTGCGCACTCGGCTGTCCGCGGGTTCAAGCTTGTCTGGGAGACCCAGCAGATGGAGCCCAGAGGTTCACTGGGACTCCCAGCCAGGTAATGGAGCTGGGAGGACATGCCCCTTTTAGGAGACTGGAAGTGGGGACAG-TCTAGGTCCGAGTAAGGCTCCAGGATCTGCCCTACCTCAACATTGGAGCCTCCCACCAGCCCTGTGTCCCCCGTAGTCTCTCTGGGCC------------------ACTCTG-----------------TGTCACACACTCTTGGCTCTCTGGCAGC-AAACATGTTCTGTTAATGACC---------TCAATAGCAGCAGCAGA--GGC--CCATGTGTTTACAAGCGCTGGGCGGTGTGTAGGGTCACCTGAGTCCCTGAGTTCGTT--CAAACACTCAATATTTAGAGCTG---GTTCCTCCCT------CACGATG---GCGCAGACGTACTGGACTCTTCCCTAG--CTGGGGACACACAGCAGGCAGGCTCAGAGCGCAGTGGGC---TGATGGTCACAGCCAGGTCTGCTGCCCTCAAGGATCTCCTCTGTGTGATTAACCTCGTGCCCCAACCATTGAGGGAGGGTGGAC----------TGACTGAATGAGGGTATGTT----GCCACAGGGGACAAGGCCCAGCCACAGAACCTTCAATGCTTCTTTGATGGGATCCAGTCTCTCCACTGCTCCTGGGAGGTGTGGACCCAGACGACTGGCTCTGTTTCCTTTGGGCTCTTCTATCGCCCCAGCCCTGCAGCTCCGTGAGTGTCCCCTGTCCATCTTGCCTTGTTTCTTCTTA---------TCCCCAGG-----------------------------ACCATACCTCTT--TGAGGTCTTAGC-------TGGATCTGACATTCCCCCAACCCTGCTCTCAGCTCAACTGTATTTCTCCCAGGGAGGAGAAATGCTCTCCGGTGGTGAAGGAGCCGCAGGCCAGCGTCTACACCCGCTACCGCTGCAGTCTACCTGTGCCTGAGCCCAGTGCACACAGCCAGTACACAGTCTCTGTTAAGCACCTGGAACAAGGGAAGTTCATCATGAGCTATTACCACAGTGAGTGTGCCC s bosTau2.chr5 45154142 1435 + 76426644 CCTTAGGGACCCTTTCCTTCCTGTCCCTCCAGTGCAGCCCCCCACACCCAAGGACCTCAACATCACTGCTACCAGGGAGAGTCTCCTGCTGTTCTGGAGCATAGCCCATGAGGGTTTCCAGAGCCACTGGCTGTCC------AGCCTGGAGTTTGAGGTGGTCTACAAGCGGCTTCAGGACTCCTGGGAGGTAGGGACCCCA-CCAACTGTGCCCCAAACCCACAAG-GATCCGGCCCAGCCGGCCCTGCTCCAACAGCCCCTCTCCCCTC-CAGGATGCCCTCACCATCCACTCCAAGTCCCCCCAGGCCATCTTGGAGCTGAAGGACCTTCAGCCCAGCAGCACCTACGTGGCCCGAGTGCGCACCAGGCTGGCCCCAGGCTCGGGGCTCTCAGGACGACCCAGCCAGTGGAGCCAGGAGGTTTCCTGGAACTCCCAGCCAGGTGACAGAGTTGGGACA--ATGCTCCCTTGTGGAGAGGGGAGCTCATTACATCTCCAGGAC-----AGGAGTCCAGTGTACACA------CAACA--GGATCCTCGGGT--GCTCTGTGTTCAGAGTGGCTTCCTTGGGCCCACCCCGTCCCTACTGTGACTCTGCAGAGGCAGCGGCTGCATCTGACTCATCCCCAGGCCCCAGTTTGCTGTCCACGTTATGTGGAGGAACAATTACAATTTAATCACAATGGTATACGGGCAGCTGTGTTTTCGTGAGGGCTGCATGACATGTGGACACGCCAACATGACGGTGTTATTTAATAAATCCCCGAACCCCGAGGCTGTGATGTCCTCCCCATTTTGCACAGGGGGTGTGAAGTTTCACAGAATTCACCCTCTGACCTGAGGTCACATGGCTGGCAGG-TCAGGCTGAGTTTAACCCTTGATGTTCTTGGC-----------CCCACAA------TCTCTCTGTGACGAGTCTCATGGTGAGCCCACTGAAGGCTAGGGAATGAATGAAGGAGGACTGAAGGAGGGTTTGTTCTCCCTCGCAGGGGATGAGGCCCAGCCTCAGAACCTCCAGTGCTTCTTTGACGGGGCCACCCTGCTTACCTGCACCTGGGAAGTGAGGTCCGAGGTAACCCACTCCGTCTCCTTCACCCTCTTCTACAAGACCGGCCCCAGTGCACGGTGAGTGTCCCCTGCCTCTGTCCTCTCCCCTCCTCTAAGCCTCACCCTCTCCAGGCCTCCTCCTGCCCCTGGAGCCCAGCAGAAGCCACAGCTCCTCCTGAGGTCTCACCCCTCACATGGCCCTGCC--TCCCCCTGCCCTGACCTCTGC-------CATGATCCTCAGGGAGGAAGAATGCTCTCCCGTGCAGAAGGAGAC---TGGCAGCCCCTACATCCAGCACCGATGCCAGATTCCTGTGCCTGACCCCAGGAACTACAGCCAGTACATCGTCTCTGTTCGACCAAAGGTGGAAGAGAGACTTATAAAGAGCTCAGACAACAGTGAGTTTGCCC a score=16215 s mm7.chr15_random 3842590 1373 + 7075849 GAGTTCAAAGGAGTCAAAGCGGCTGGGGTTGGAGATATTGGTCCAGAGTGGAGAGTACATTTGACAAGCTTAGGA-----------------TGGGGGAGGACATGATGAAATTTTCT---GAAATTATCCTCCCTCTAGTCCAGATGGAACCTCCAATCCTCAACCAGACCAAGAACAGAGACAGCTACAGCCTGCATTGGGAAACTCAGAAAATACCCAA---ATACATTGATCACACTTTCCAGGTCCAGTACAAGAAGAAGTCAGAGAGCTGGAAGGTGAGGTCCAGGACCCAGGGGATGTTACAGGCAGGGAGGAGAGGAAAGAGAGGAAATTCTAGGGAA--CCCTACTTGCCAGGAG--CTGAC-CCCAGTGCCTTAGGACCCACA-------------------TGGTCAA--CAGGTGACAGTCTAATT--------TCTTGATGAAAGA-TTCAGGCTTAGAGAGGTGACATGAC----------ATGGTCACATGACCAGTGCTACCCTTGAGCTG----------------------AGGGGCCAGACTGGCAGAGGAATGGAATGAAGGGTT--CAAAGATCACCAAGGCCTGGATGTATTTCCTCCCTGGAAACAGATCTGACCAATGGAA-----CAGCTGCTGAGGGCCAAGCTGAT------------GACAAGGCCTTTCCAGCATATATCACACA--------------CACATGCAAAGTCCT----GCCAGCAAAATGCAGACCCTGGGGCTCCACAGAGACTAACACAGGACC-----AGTCAGAC--AGAATTCTAACTTCAGACAGGAAGTAGGTAAACTTAGGCCAGAAGAGAGTCAGGA--------------GAAAATCATTCCTGACCCCCAAATCAT---------AGGCTAGGACCCAGCAAACTAGCATGATGTTCCTGGATCAGTCAGAAATTAGGCCAAGGC-ACAGCAA--CAAATTGGGAGGTGGAGATAG--CCTGGT-----CTTGGG---CCTGGATGCAGCTGTCAGGGCTGGAAGGGGTGGCACCTGGGGTTGGTTACAGTAGGCTCT-----GAACTGGCATCCTGGACTG----------------GACTAGAGTGTCTACGGATCTGGGG--GTAGCTGCCAGAAAGGCA------------------GCTGAGCCCCTGAACCTGGCTGGTGGCTCAGCTTCG--------------------------------GCACATCTGCCTCTGCAGGACAGCAAGACAGAAAACCTAGGTCGAGTCAATAGCATGGACCTGCCCCAGCTGGAGCCGGACACCTCATACTGCGCCAGGGTGAGGGTCAAGCCCATCTCTG---ACTACGACGGGATCTGGAGCGAGTGGAGCAATGAGTACACTTGGACGACTGACTGGGGTATGTCCCTCA-GCCACCACCACACTCCTGGGACAGCCCCACTGCATAGGGCA-AGGGAGG---------CAGAGA-GCCACTCTACCCT------GTGTCCATCCCTGTGGGACA-CACTTGGTAT------ATTA--------AGTGGGC----------------------CTTGGGGAGAGAGAAAAG------------------------------CTGGGGTCCAGGCCTCTATTTATATAG----GGCTC---TTGGCTTTC s bosTau2.chr5 45157013 1668 + 76426644 GGGTGCAAAGACCCTAAGATGGGTGGGACCTGGGGTTCTGGGTTAATGGAGAGAGCATCTGTGATGAGCATGGAACACAAGAAATGTTCCACTGGAGGAATATTAGAAACAATATGCCTTAAAAGTTTTCCTCCCTCCAGTCCAGATGGCTCCCCCAACCCTCAACGTGACCAAGGGCAGAGATGGCTACATCCTGCACTGGAGAGAAGAAAAAATGAGCTACTCACACATAGCTTGCATCTTCCAGGTCCAGTACAAGAAAGAAGGAGCCTCATGGGAGGTGAGAGACTGTGCCCAGGGAGGGGC-CTGGAGGGGAGGAAAGGGCAGCGAGACAACACTTGGGAAAATGCCACCTGCCCAGATGCCTGGCTCCCAGCATGTGACCAGCCACAGAGAGCCACTGGGACTTGGTGGCCACTCCAATGAGCAgtctcattgtctctttctttggcgaaggaactgagactcagagagatgatgtgaacttggccaaaatgtacacaTGACC----------CTGAGTTGCAAAGGGGGCATGGACATCAGGAGGGGGAGGGCTGAGAGGCAGCTGGAG-GATGGGTTTTCAAAAGTCATAATAA---GGTGACACTTCTTCATAAGAATCTTATCCAG--AATGCAAATGTGCAGCTGCTAAGAGCAGAGCAGCTCCTGGGGAGGCCGGCAGGGCCT---CAGCCCAGGGCTCAGAATCTGGCCCTGGGCCTCAGGCA--GCCCTCGGGGCCTGTGGA---CAGAACCTGGGGCTCCACAGAGGGCAGATCAGAAACCTCAGAGCCAGCCCCAGAATT-----TTCAG-CTGGAAATGGGGAAACTGAAGCCAGGAGGGAG--AGGGTTAGTGGTGGAGCTGGGAGTGGTCCTTGCGCTCCTGAACATCTGTTTGGTGGTCCAGGTTTTGGTCACCCTGCACCGCACTCCAGGGGAGATCATATCTGGGGTCCAGGCTGCCCCAAGGCGAGCTGGGAGGGTGAGGCGGGGCATGGTGGCTCCTCAGGGTTTCTGCACCCTGGTGT------TGTCATGTGTG---CCAGGAGTTCAGTACAAGAGGTGCTCCCTGGTCCTGTCCCTCTGGAGTGTGGTCCTCTGTGGTGAGGCTGATGCTGCT-CAGATCTGGGGATGTGACTGCAAGCTAGGAACTGATGGGTAGCAGGAAGGCTGGGGTGCTGAGGCGGGAGGGTTTCGTAGCTGTGCCCACGTGCCCCAGACCTCAGGACTCCTGCTCACACACCTGCCCCTGCAGGACACCAAGACAGAGGACTTCCAGAATGCCCACACCATGTCGCTGCCACCTCTGGAGCCCGCCAGCCGGTATCAGGCCAGAGTGAGAGTCAAACCCGACCCGGGGAACTACAATGGGATCTGGAGCGAGTGGAGTGAAGCAAGGTCCTGGGACACCGATTGGGGTAGGTCTGCCACGCCCCCTCACCCCTCCTGGCACAGCCCTGCTGGGCAGAGGACAGGGAGGATATGAACACAGAGACGTAACCCCACCCCAGGATAGCATCCTTCCCTCCCAGACATCATTAGGGATTAGAAAATTATACCTCCTGGTGTGCAGCACAGACTGCGGCAAGGTCTCCAGGGGACAGAGGAGAGAGCACGTCTCACCAACAGGTCTTCCTGAGACTGAACCTTAGCCTTCTATTAATATGGCCCAGGCTTCTATTggcttcc a score=9967 s mm7.chr15_random 3844122 923 + 7075849 CCATAGTGACTGCCTG---ACACACACTGTGCAAGGT---GGATGTGGGGTGGGGGATGGTAATGAAGCATTT-----------CGCATAGTCAGGC--CTGTCAGAAGGGGGGAATCTCAGAGTGAGAGTC--ATTCTGGAAGAAAGAGGGCTAGAGCCAT-GAACTCCAGAGATGGGGA-----GGGGACTTACAAGGCCCCAATCAAGAAGG----------CTAGGGGAC----------------------------CTTCTGCTGGAAACCTTCCCATCTCCTCTGACCC--TCCCTGGGTCAGAAAGCCATAGCCCATGCTCCTCAT-------TTCAAGAAGTCCCCC-------CAGTTGACAAGCTCAGTCACCCCCTACCCAGGGTA---CTTGCTGCTGCTTAGGGCAGAACTTCC------------------CCATATTGAAGACAGGGTACGGACCCAGGGT---TTCTTCCCAG---GTACCTGGCCTTTCT-----CACAGAAGGCATGGGAGACACTAGCCTCCTCCCTT---AGCCTGCAGCTTGTGCCTCCCAT-----CTAATGCTGCTTCT-CCTTGTTGACC-----AAGTGATGCCCACGCTGTGGATAGTCCTCATCCTGGTCTTTCTCATCTTCACCTTGCTCCTGGCTCTCCACTTTGGCCGTGTTTATGGGTACAGGTAAGTGCACTCTGTGTGCAGAGGGAAGTGGAAACTGGGCTCTGGGGTCACAGAGA-----------------TGACACAGCTGGATACACTCTCGTTCCCAGCACACCATT-------------CACTCCCCTAGTTTCAGTTTTCCCTCTATACATGGGCACAGAAGTAGCTGGCACAGAGGTCTATGGAACCTCACATACACGTGTCCCCACCCTCCTGCTGTCTT-CCAGGACATACAGGAAGTGGAAGGAAAAGATCCCCAACCCCAGCAAGAGCCTCCTGTTCCAGGTAGGA----------AGGCAGGCCTTGCTGCTGG----------CTCCCGGTCCCATTTC----------TGTCTT--------------------------------------CAGG------GGGAAGCG--TGGGAAAGCTGGAAGGCTAGGCCAGC s bosTau2.chr5 45159057 1117 + 76426644 CCATGGTGGCCACCAGGAGACAAGTATAGGACAAGGTCCAGGAGGTGGC-TGCAGAAAGAGGACGAAGTGTTTGCAACAAGGTCCCCAGTCCCAGCCAACTGTCAG--GGAAAGAGCCCCAGAGAGAGGACCCCAACCAAGCAGAAAGGAGAACTGGGCCACAGGACCTAAGGGAAAGAGATCAGGGGAGTTCTGGAGGGGCCCAGCCAGTAAGGGGCTTAAGCCCCAGTGGACAGTTGAGAGAGTCTTTGATGGGCCTTTGCATCTTCTGGTTCCTCCACCATCACCCCTTTCTCCATCTCTGCCTCTC----CTGTTGTCCCTGTTCTTGATGACCTCCCTCGGGAAGTCCCCTGTGATTGCCTTTGGCTA---CAGTTGCTGCCCTCCCATAGCAACTCCTGCTACTGGCCAGGATCTAACCCTCTGTGTCCTCCCACCAAGTCAACATTGTGGGT--GGCTCAGACAAAGGCCCCCTTCTTCTTAGTCAGTTTCTGGCCTCCTCTCCTCCTCTGCACCCCAAGGAAGCAGCGGCACCCTGTCTTCTGAGTCTCCAGCTCTTTCCCTCCCTGGATGCTAATCATCCTTTTTCCTTCTTGGCTTCCTGAAGTGCTGCCCATGTGGGTCCTAGCCCTCATCCTCGTCATCAGCACCTTAATCCTGCTTCCAGTCCTGCACTTCTGTGGCGTCTACGGGTACAGGTAAGGGGACTCC--------AAGAAGGGGGAGAGTGTTATCCAGGGCCCCAGaggatgccagggtcactatctgtcacagctctgt---cacccgctcccaatggggtcttggacagatctgagctgtccctgggcttcagttttacctcCGTACATAAGCACAG--GCAGCTG-CCCTGAGGTCTTGGGCA--------------GCAGTCACCTCTTTGTTGTCTTTCCAGGCTGAACCGGAAATGGGAGGAGAAAATCCCTAACCCCAGCAAGAGCCACCTGTTCCAGGTAGGAGCTGGCTGTGAGGGCAGCAGAGGTGCTGGGGCTCATGTGCTCCTGCGCCCATGTCCCCATGCCTGTGTCCTGCTCCCCATCCTGTGGGCTTTGAGTAGGGCTGGGGGTGCAGGTGGCTAGAGAAGGGACTGGGAAGCTCTAAGAGCCAGGCCAGC a score=993 s mm7.chr15_random 3845051 43 + 7075849 TGGGTATCTGGTATTGC-CTGGGTGCC-TGAAGGAGGAGTCTCAC s bosTau2.chr5 45160199 45 + 76426644 TTGGTATCCTCCAATGCTCAGGGTGCCCTGCCGGCGGGGACTCAC a score=48215 s mm7.chr15_random 3845328 2085 + 7075849 CACAGAGCAATGGCCG---TGGGGATACACCAGTGCATGAG-AGAAGAAGCTATAG-------------GGAACAGCATGGCTGCTTACCTCAGGAGCTTTAGGGCTAAGGGAA---CACAACCCCTAGGATGCCTCTTTGTTTCTTGGAGTCAGAGGCCTGA---GCTGG------------GCCCTACCATGGGGC------ATTCTTCCCATGTCCAGAGCTTATGGAAGATTCTATATGCACATGTGTCCTTCCTGAGGTGCC--ACATTCACAGACACAAATGCCCTTTC-CTTTGTAGGATGGAGGTAAAGGTCTCTGGCCTCCTGGCAGCATGGCAGCCTTCGCGACTAAGAACCCCGCTCTCCAGGGGCCACAGAGCAGGCTTCTTGCTGAGCAAC---AGGGGTGAGTGTTTGGGCTCTGACCCTTGGGGAGCCTGTGGGAGGG-AACCTGTCCATGGTGCACATCA-----TTGTAGCCTGTGG-----GTCT----CTGAATTTGAGAAGA------GAGGCTGCC--CACTGTAGCAAGCAGCACACCAGGTAGACATGAGGAAGACTTTTTCTGACTCCCGGGTTGGCGTGAAACAGACAAGGGACCAGAGGCAGCATCCCAGAGCAGGAAGCCTCTCCTTGCCAGG-TGCCTATGTAAGCCCTGCACTGCAATGGCCTCA-TGGGTGACTGAGAGTGCACACTGTGGGACTTCA--GCCT-----GCTAAGCCCACGTGCCAGGGAGTCAGCAGCCTT-GTATGGCAAGTG--TGAACCC--------------GGCCCTGAAG---GTTCACACTTGCTGCAAGGAGCAGAAGAGAGCAAACAT--------TAGAATGGGGGTGTGAACTGAGCCCTGAGCACGTGACGCTTTGGGACACTGGACA-TACACGATGTCATCCACAGGACCTCATGCCT--CGGTGCTCAGACCTCA--TGCCTGAGGCCCGGAGGGATTCAGGCTTTCTGTAGAGCTCACCTGCTCTGGCT------ATACACTAAG-----TATCTAGG-----TTCAACATCTCTGCCTACATTGTCTCCACAGGGTGTCATATGAACATTTGGAAGACAACAACGTGTCACCTCTCACTATAGAGGACCCTAATATAATTCGAGATCCACCATCCAGGCCTGATACAACCCCAGCTGCCTCATCTGAATCCACAGAGCAACTTCCCAATGTTCAAGTAGAGGGACCAATTCCTTCTAGCCGACCCAGGAAGCAATTACCCAGCTTTGACTTCAATGGGCCCTACCTGGGGCCTCCCCAATCCCACTCCCTGCCTGATCTCCCAGGCCAGCTGGGTTCTCCCCAGGTGGGTGGGAGCCTGAAGCCAGCACTGCCAGGCTCCTTGGAGTACATGTGTCTGCCCCCTGGAGGTCAAGTGCAACTGGTCCCATTGTCCCAGGTGATGGGACAGGGCCAGGCTATGGATGTGCAGTGTGGGTCCAGCCTGGAGACCACAGGGAGCCCTTCCGTGGAGCCAAAGGAGAA------CCCTCCAG---TTGAGCTGAGCGTGGAGAAACAGGAGGCAAGGGACAA---CCCAATGACTCTTCCCATAAGCTCTGGGGGCCCTGAGGGCAGTATGATGGCCTCTGATTATGTCACTCCTGGAGATCCGGTGCTCACTCTGCCCACAGGGCCCCTGTCTACCTCTCTGGGCCCCTCTCTAGGGTTGCCCTCAGCCCAAAGCCCCAGTCTCTGTCTTAAGCTGCCCAGGGTCCCCTCTGGAAGCCCAGCTCTAGGGCCACCAGGGTTTGAGGACTATGTGGAGCTGCCTCCAAGTGTGAGCCAGGCAGCCACGTCCCCTCCAGGCCATCCTGCTCCTCCTGTGGCAAGCAGCCCCACAGTGATCCCAGGAGAGCCCAGGGAGGAAGTGGGCCCAGCATCCCCACATCCCGAAGGCCTCCTTGTTCTTCAGCAGGTTGGGGACTACTGCTTCCTCCCTGGCCTGGGACCTGGCTCCCTCTCACCACACAGTAAGCCACCCTCTCCAAGTCTGTGTTCTGAGACTGAGGACCTAGACCAGGACTTGTCTGTGAAAAAGTTTCCCTATCAACCCTTGCCCCAGGCCCCAGCCATTCAGTTTTTCAAGTCCCTAAAGTATTAGGACTACCTGTCCCTGCCCCCTTGGGACAATAGCCAGTCTGGGAAGGTGTGCTGAGTCT s bosTau2.chr5 45160549 2126 + 76426644 CACAGGGCCAGAGCTGCCTTGGGAGGGTCTCAGGGCGGGTGCAGAGGGGGCTGGGGTGAGCAGGGAGCAGGGACAGTCCAGATAGTGTCCTCAGGAGACCCGGGACCCCAGCAAGGTCCCAGCCCCTCTCTGGCCTCATC--TCCCTGGTGTCAGGAGGCTGTCCTGCTGGTTCTGAGTATCTGCCTCTTCTGGGGGCTCCTGAATCCCTACCACCCTCAAGGCCTTT-----CCTCCATCTGCAC-------CTTCTGGAGGGCCCTGACTCCCAAAGATACAAATGCCCTTTCTCTTCCCAGAATGGGAGCGCCGGACTCCGGATGCCAGACAGCATGGCCACCCTGGGCAGTGGGAGCCACCCACACAAGGGGCCGTGGGGCAGCAGTTGCCCTCAGCTCCTGGAGGGGTGAGTGTTGGGCAGGGGATCCCTGGG----CGGTGGGAGGGTGGCCT---CCTCCTGCACACCAGAGGTTTGGAGGAGGTGGCTTGGGTCTAGGCCTCAGTTTGAAGAAATCCATAGAGACTGGTGGTGCTAAAGCAAGAGGCATCCCTAGCGAGGGTCAGAA-------CTCAGACTT-------------------------GACCGGAGGCAGGAGACTGGAGCAGATGACCTCCCTTCACCCTGCTGCCCAGGGAGACCCCACACTGCCCTGGCCCCACTGGGTGGCGGAGGGT-----CTGTGAACCTTCATGGCCTCAGCATCTGAGCC-----ACTAGCTTGCCACTAACCCTCATGTGAGAAATGACTGAGCCCAGGCTGGACACCTGGGCCCTGAAGCTGGGTGATA------GCAAAGAGTGGAGGGTGGGAGGGGTCCCTGACCTTGAATGAGAGC----ACAGAAGCTGGAGGGCCAGACCCATGGGGAGGCTGAGCAGCATCTGGTTTCCTGCTCTGGGCCTGCTCCCCAACACTGCCCTGCTCTGAGTTTTCTG-----TGGGTGTGGCCAGGCCTCTCGTTCCACT-ACCCACTCTGCCCCTGTGCATGAGCTGAGACGTCTGTCCAAGGAGGTCCCAGCATCTCTGCTCCTGTTCTCCCCACAGGGTGTTCCCTGTAGACTGCAGGCACAGCGAGGTGTCACCTCTCACCACAGAGGACCCTAAAGATGCCTGTGACTCATCATCAGAGCCGGACATGACTCTGACTGCCTCGGATCTCCCCACGGAGCAGCCCCCCAGCCCCCCGACAGGGCTGGCTGCCCCCTCAAGCAGGCCTGAGAGCCAGGCTTCCGGCTTTGACTTCAACGGTCCCTATCTGGGGCCGCCCCACAGCTGCTCCCTGCCTGACCTCATGGGCCAGCAGGTGCCCCCACAGACGGGGGTGAGCAGGAAGCCACAGTCCCCGGGGTCCCTGGAGTACCTGTGTCTGCCCGCAGGGGGGCAGGTGCAGCTGGTCCCGCTGGCCCAGGTGAAGAGGCAGGGCAAGGCCGGGGATGGGGACACAAAGTCCAGCCCAGGGGCCCAGACGAGCCCTTCCCTGGAGTCAGGGGTGGACCCTGCCCCTCCAGAGCCTGGGCTGATGGGGGTTGGTCAAGATCAGAAGGACAGGGCCCCCACAGTTCTGCCCACTGGCTTG------CCTGAGGATGGCACCGTAGCCTCTGGTTATGTCACCACCCCAGATCTGATATTCACCCCACCCATCGGGGCCCCATCTCCCTCCCAGGCTGCCCCTCCAAACCTCCCCTCAGACCAGAACCCCACTTTCCATCCTGGACTGGCTGATGGGCCCCCTGTAGCCTCAGCCCCCCAGAAACCAGAGTTCGAGGGCTATGTGGAGCTCCCTCCAGCCACAGGCCAGTTTCCCCAGTCCCCTCTAGCCAGCCCTGCCCCTCCCAGAGTCAGCAGCCCTGTCCTGAGCCCAGGCCCGCACCGGGCAGATGTGTCCCCCACCTCCCCTACCCCTGAGGGTCTCCTTGTCCTGCAGCAGGTGGGTGACTACTGCTTCCTTCCTGGCC------------CTCTCTCCCCCCAGAGTAAGCCCACTTCCCCAGGACCCTGTCCTGAGATCAGGGACCTCAACCAGGTGGTCCAGGCTAAGAAGCCTCCGGCTCAGCCTTT-CCCCAGGTGCCTGCCATTCAGCTCTTCAAAGCCCTGAAACAGCAAGATTACTTGTCACTGCCCCCTTGGGACATTAA-CAGCCTGGGCAGGTGTGCTGAGTCT a score=16139 s mm7.chr15_random 3852585 1045 + 7075849 CAGCCCTGTTCTATGGGGAGCCCTCTTGTCTTAAGTCCAAACTGAGGATTGGGTCTGTGTTGCCAGCTGAGG--------------------------GTCATGAGGGCAGGAGACTGTAGTGTAGAGACTGAGAATCCCATTCTGTGGACTGGAAGGCTGTACTCCAAGCAACACTGCGTGGGCTCTAGGCAGG-ATGCTGAGGTGTGTCCTGGACAAACAGATTC-ACGGAGCTGCCTTAGACAGCTTCATGAAAGTTGGAGATGCTAATGGAAGCGGGGGGGGGGGGCAGGGGCTGATGGTATGCAGAGCTGA--CGAGAGAGGGCAGGCTGGGCTGGG--TCTCCACCGCATGAG--------------CAGCCTAAGAATGAGCACCTAAGAGAG------GAAGAAGCTGGAGGCTCACA-GGCCCTGGTACCC--TCTGGGCATCCCCCACTCAGTC-ACCATCTTCAGGGAACTGTGCAGGAC-------------ATACATGGTTCCTAATTTCATATACCTCTCCCCACAGAGACT-----------TGTTTCTCCTGGGTCTAG-CTGTGGCTTTGG--CTGAAACTTGACTCAGCTCTCTCTGTGTTACACAATTTGATTCCTTCAGGTTGATAGTCACGCAAGCACAACACAGGAAGTGGTAAGCACATGTTCTGGGATGATTAGCATCAGGGTGGAGGA----GCCGGGGATGCAGGGCCATGCACACTGGATGGAT-----GTGGGGACAGCTAA-----ATACCTTG--GAGAAGAAAAGTGAGAAGAGCTGAATGAATTCAAGTTGTGTGGGTTCA-CAACTTTG----GGTTCAAAGGCCA-CTGAGGTGTTCCCTTCT-AGGACT-CCACAAGAACTTAGCCTTGGCACATTTTCTTCCTTCTGGCCCCAGTGAT-GGGCAGCCTTCTATGTAGTCTGTCCT-CTGGAAACTCTAT-GGTTCTCTGGATCGCCCTCTCTCTTCAAGGGGTC-CCACTGCTGTGGCCT---------CCAGGGTTCAAGTCTCCTCAGACAAGGTAGCATAATTCAAGAACCTTC----TTCTTGTGTTTTGGTTTTCCTACTGAGCACCCAAGGCTGCCTGGCAGGGCTAACAAACTTGGCTGGCTGCAGCAGGCACCAA s bosTau2.scaffold1343 247375 1123 + 254597 CAACTCTGTTT-------ATTCTTCCTGTTGTAGGTC-------AGGAT-GGATCTGAGCCTCCAGCTGGGGAATGAGGAGTGAGGAGACAGTGGCTAGCCATGAGGAAATGAGACC-TAGGAACATCACTGATAATGCTCTCCTGTGAGACTGAAGACTGTGCTCCAGGCAAGAATTCAGAGACCCCTGGAAGGCATCTTGGGGAGAGGCCTGGACAAAGAGATCCTGTGAATGTGACTCTGA----TCAAAGGAATCTGAAG--GCAGATGT---CTGACGGAGTAGTCAGGAGAAGGGGGTGTGAAGCGCTGGGCTCAGAGAGAGCAGCCTAGTCTGGGATCCTGCACAGTCTTAGGGAACCAGAATCACTAGCTCTGGTTGGAGGAGCTGACAGAGAGATGGGAGGGAACTTAAGCCCCTCATGGCCCCCTTTCCCATCCAGAGGATCACCATCTCACCCCACCATTGTCAGGGACCTGCCCAAGACTCAGGGAGTGCTCATCCTCTGTTCCTAAGTTTAGCTGCATTTTCTCAGGGGTACTGCATAAGATCCTGCTTCTC-----TCTAAACTGTGGTTTTGGTGCTATATCTAGACTGAACTCTCT----GTTACATAATTTGATTCTTTCGAATTGATAATTTCTTGAGTACAAAAGAGGAAGTGTAAAGCATGTGTCTTAGGGTGATTAGCATGGGAGTAGGGAAACTGACTGGACAGATGGGGTTTCTCACATGAGATGGTCAGGCAATGAGGCCAGGTGGGGGTTAGAATTTGGTGGGAAGGCAGATGAGGAGAGCGAAGTAGATTC-AGATGCATGGGGTCATCAGCCCTGGCTAGGGTCCAAGGCCATCTGGGCCTCTCCCATCTGAGTGCTGCCCCAGGACCTGACCCCCAGCACTGCTCTCTCCTTCCAGCCTGGTTGATGGGGTGGCTTTTCATGCAGCTAGTTCTCCTGTGGGCTTCAGAAAGTCTCTGTATCACTATCTCTCTTCAAGGGACCACTCCCTCTGTAGCCTCAATACCCACTAAGG--CAAGAGGCCTCA---AAAGTGCCAT------AGGGCATTCCGCATTCTTGGGACTTTGTTTCCCTGATAATTACAAGATAAAACTTGACAGAGGTAATAAATCTGGCTACTTGAGGGAAGTCTCAA a score=3253 s mm7.chr15_random 3856195 74 + 7075849 GGGCCATCTGCCGGTCTCTTTCGGATTCAGGCTTTGGGAACACATTATCCTTTCTGCACAGCTTTGACCCCACC s bosTau2.chr7 35885517 74 - 69141744 GGGCCGTCACCAGGAGTCTTTCGACTTCAGGTGGCAGAAACACTTTGTCCTTTTCGTACAACTTTGGTCTCATC a score=8550 s mm7.chr15_random 3857065 699 + 7075849 TTCATCTCAAATTGCTCAGATTTCTTGTTACAGCTCAGGTGATATCTCTGTTTGCCACTGTTAAGTGTGGGATTTCTAAGTGAGTTTTGTGTATTGGGAAATGTGCCTGTTTTACAGATGGGAAAGCTGAGTCTCTCAG---------CAAGTGAATAAGCTAGGAGTG--------TTTTGCAGATGGGGAAAGTGCGTCTTTCCTGCAAGTGGTCCAGCTAGGCAGAAGTGGAGGTATACCTGGATCCTCCTCTTA-----------GCCTCTCTTGCTTCCCTTATCTCCATAGCAACCTCTGAATAGGTCATT--CTCTGCCTCTCTTTCCTAT-----------------CCCACTCTTTCTGCACTTTCTCCATGCCCAGCTAATCAACTGACTGTCTCATTCCAATTACACTTTAAGACAATCCTCCAGACCGCAGCCCCTGTGAGGTGCTTCTAAATTTGTTTGCAGGGAACTGGGATATTAACCTGAATTGTGTAAATGGAAAGTCCCCAAGTTTTCAGCCTTGGGAATG-------ATACTTATGCCAATAGAGCCAGGCTTGGACTCGTGTGTGGACCAGTCTTCCCCA-----AGGTTCACTCTGCCACAGCACCACCCAATCCTGCCTTTCTGGAAAATCCC-------TCACATCAAGCAAATAG--------AGAAAACACACAAAGGTCACGTTCACACATTGTCTGCTTGCTGCAGCTGTGGCCACTA-AAGGTGAAGAAGCCCCTCCCTCTCAGGA s bosTau2.chr7 35886124 712 - 69141744 TTTCTCTTAAA--GCTTAGACTTCTT-------TCCAGGTGGT-------CTTCTCTTTGTTAAGTCAGTGTTTTGGAGGTGAGTGTTATATGCCAAGGAATGTACAAGTTAGACATC--------CTTATTTTCATAAACTCTGTGACAAAGGAAGGTGCTACCATCACAAACCCATTTTACACAAGCAGAAACTGAATCTCTAACACAAGTTACCCAACTAAGAAGTGATGAAGACAGAACCCATGTTTTCACCCATGCAGCCCAATGCCTAGCCTGTTTTCATGCTATTCACAGCCTCCCTCCAGCTGGCAACTGCTTTTCCCTTTCCTCCCCATGCCTTCCAAAAGTTTGCCCCACACTTCCTTCCTTTCGTCCATCCC-------TCAG-------------------TGCCCCTAAAAATAAATCTCCAAACCAAGGCTATTGTGAGGGTTTACTGCACCAGCTTCTGGGGAAATGGACCATGAGCCAGAATTTCAAAGGAGGAAAGTCCCAAAGTTTACAGCCTGGGAAGAGGGCTCCAAGTCTCACCACAACAGTGTT-TACTTGGATCCCTGCCCTGGCCTCTCTTCGCCAAAGCCAGGCTCGTCAATCCACAACCTCATCTGGCCCTATCTTTCAGGAAAACCCCTCTTCTATCACATCCATCAGCCAGAAGAGTCAAGGAAACATATTCAGGTCATGTTCACGGAT-----------CTCAGCCTTGAGCACTGCAAAGAATAGAAGTCACTCCCTCCCAGAA a score=6246 s mm7.chr15_random 3863903 256 + 7075849 GAATCTTGGGCTTTGTGATTGTACCATGTTTATATGTTGGAAAAAAATCATTCACCCTTCCTCTGAAATTCCCTGTACAGAGGTTACACAGCCCACGCACC-CTAGGGAGAAA-TAAAAATGGAGCCGTGCTTTTCA-CATAAGTCCAGGAAGGGACTG------------GTGCAGCAGGCAAGATAACACTCTACAA---------------TTGCTTTTCCCAGCCCAGAATGCCACCACTGAGTGTGTGCCCCTGGTTTGAGGAGATCCTTACCGAGTTAGA s bosTau2.chr5 31364502 286 - 76426644 GAGTCTTAGGCTTTGTGATTGCAGCAAGCACAGTCAGGAAAAAAAATGTGTTTACCCTTGCTCAAAAATTCTTTGTTTGTGGATTGTAATGCATAAATCCCACTAGGGAGAAATTAAAACTGAAACACTGCTTTTCATTAGAAATTCAGGAAGGGGGTGTGCATAACAGTTTTCCAGGAAGGATGATAACATCTCACCAGTCTGGTTTGTTGTTTTTTTTTTTCTCGTCCAGAATGCCTGCACTGAATATGCACCACGGGCGCAAAGTGGTTGCTAATCAGTCAGA a score=18520 s mm7.chr15_random 3869053 882 + 7075849 CTCCCTGGCCCTACACAAAATCCCATTTCCCAACTGTGGCCCTTAGAGACAGAATGGTTTATTGAATCCAAAAGGTAGAGTGTCAA---AAACTTAATAGAATCCTGTCCAGTAGGCACTCTGGGCCAGGAGGTTTGCATCTTACATC-AGTCTCCCTGAAGGTCTCCGTGTTCTTGGAAGGTAAAGGCCCTTTGCTGAGCGCCCCGTCCTTGCCACAGGGTC-CCTGTGACTCAGGGGACAGTGTTGTAGACACTGTAGTTGTCCTTCTGTGTGACATGCAGCTTCCAGGGGAAGAGGCGCTTCTGGGAAGGGAGGCCTCGGGCTTGCTTCACCATGAGTCCCACATCCTCATCTGACAGCAGCCTAACCAAGTCCCCCTCAGCATCCTGGTAGCTAAGGGCAATGTCTTCTCTCTGGAACTCACGCCTAGG-GCAACACACCAGGATT---------------AGTCTATGGATCCTGGCTT-----------------CTCCCAGGGCCTTTGAGTCTGTGGATCCAAG-------------------TGGTACCGGGGCCCATCATCCAACAGCCTTA--CTCCTGTTCTGCAGATGGGGAAACAGAGACCTCAAAGGAAGA--GGACACTGGGTAATCCAATAATGGTACGGCCTGAAGCTTCTTGTGTATAAGTGGGTGGAAGGTTTAGGAGTTTCC-----------------------------------TAAGAGAAAGCAAGGCTGCCCAGG-AGGCCTGTA-GGAACCAGTGACAACTTTGGGAGGA-GGGCCATGCTTCATC-----ATGGCTGGAGGGAACAAGATCTGAACTAACTCCCCATGTGCCATCCCAG-----------------TCTAATCCTCTTGCATACACTTCCATCCCATAATCCCACTTCTTG-----------------ATAATGAGACGGTATATGTGAATGAAGATTTACAATATTCTTGTCAGTGGTAACCGGGGTA-TGGGGGCTAAGT s bosTau2.chr5 31367504 999 - 76426644 CTCTCTTTCCTCCAAAGACATTCTCTTCCTCAGCC-TGCCCCTTTGAGATGAAATGGTTTATTTAATTCAGAGACCAAATGTACAAGCCAAGGTCAGCAGG--TCTGTCCA------ACTCAGAACCAGGAAGTCTGTCCCACACGCCCAGCCCTTCTT--GGTCCTAATGCCCTCAGAGGG------CTCTTTGCCAGGAGTCCCCTCACTGCCCCAGGGACACCACTGGCTCAGGGGACTGTGTTGTAGACCTTGTAGTTGTCCTCCTGGGTGACGTGCAGCTTCCAGGGGAAGAGACGCTTCTGGGAGGGGAGACCTCGGGCCCGCTTCACCATGAGCTTCACGTCCTCATCTGACAGCAGCCGAACCAGGTCCCCCTCAGCGTCACGGTAGTTGAGGGCGATGTCCTCTCTCTGGAACTCCCGCCTGGGTGGGAGAGATCAGAGTTCGGGAAAGGTCCAGCAGCCTTTAGGCCTAGGTGTGGGAGCAGGGAGAGGGGATGGAGGGAGATTTAGGGCCG-ggatctaagaattggaaggggtcagagctggacaccggttctatcatctgagtggtccaatctcccattgtacagatggggaaattgagacctccaggggaaaatgggactttcacaaTAAATTTGTGGAACAGCTTGAAATGTCT----TATAATGTGCTGAAGACTTTAAGAACTGTCATGGGGAAGAGAAGTGGGTTTTATTGAGCACAGAGTAGAGGAGGATAAAGCCCCCGAGACAGCCCTGTGTGTGGCCACAAAGAACTCATGAAGGACTGGAAGTGTCTGATCTGGGTACAGGTAGACGGGTGAACAGCCATTCAAATTTTCCACAGGTAaatctgacaaaatgagtcagaagctctatctgacttgcaaacaccttgatccccaaacctcacttttagaaaatcatcctaaagaaataatcaggcaaaacatcaaataggcgaatcgcagcactattcacagtagtatgtaaaaaagtggaagataact a score=2369 s mm7.chr15_random 3870256 66 + 7075849 GTGCATGTGCTGACAGAATCTGAGCACACATCAGCTAACGATAGGAGTGCAATATAG------------TCCTCATAC s bosTau2.chr5 31368607 78 - 76426644 GGGTGTGAGCTGAAGAAATATGAATGCACATCAGATAATGAGAGGAGTAAAATATGAGGTGATTTCAGTTCTTTATAC a score=18382 s mm7.chr15_random 3870424 695 + 7075849 tgtgtgtgtgtCCAAGTACAAGGCTTTTCGCTAGAGAGATGTTCTGATAGCAGATCCACAGTCACACACTGGGACCTCCACTGAGCCCTTGCC-CTCTGCAGCCTGCTTGGCTCCTCTCTAAGGCACCGTGTACTGCAGAGA-CTGGAGCTGTCACAGGTC------------------------CCCTCCTAGCGCATTGCCCTCCAAAGTCTCC--------------CTCCCTTCCCAACCTCTCACCTCATGAGCGCTAGCAGGTCTTTGAACAGGGGCGTGCTGCTGAGGTCCTCCTCCACCGCAATGTCCCTAAGGG------GGACAGTAGAAGAGACAAGCATCAGGGTGGAAGAGGGAC--GTGTGTGGTGCCAG-------AAACAAGCTCTTGC-------TAAAGCACTATGGTTTATC----------TGGGAGCCACAGCAG-----CAGCTGCAGG-----GGAGGGGAGAGACAACACAGGAGCGTTGACTGGGAG-ACAGTGGCATGGTAGGGGTGG-------CAGGGAGGAGTAAGAGGCCCGT-TCTCCCAGCAGGACACCAACTTGATGGTTTTGCCTGTGTCTTCATAGAAGTAGCATCGTAGCCAGTTGGTGGTGTCCTCGTCCTCGGGAAAGTCCTTAAGGATCTTCACGAAGGACCCTGGGAAGATGCCTGTGGCTCCCTGGGAGGTGCCCTG-GAAGTGAAAGAAGAGGCT---------------GGTGAGACC-CAGTGTCACGTCTCAGAGTCCCACACTCTTTACAACAACGA s bosTau2.chr5 31368821 787 - 76426644 TGGAGAAGGGTTCAAGTCCAAGGTTTTGACTTAGAAAAACTT-----CAGCAAATCCAGGCCCACA------AACCTCAA--GCCCCTTTACCTCTCTGCAGCCCCCTCCCCCCATCTCTAATGTGGTGAGCAAAACAAAAAGGTGAAATAGATACAAAACGCCCAGCCCTTGAATGTGCTGTGTTCCTCCCTCTGTTCTCTCCTGCAGGGTGTCTGACACCCCTCGAAACTCCCACCCTAGCCCCTCACCTCATGAGCTCCAGCAAGTCCTTGAAGAGTGGGGTGCTGCTGAGGTCCTCCTCCACTGCAATGTCCCTAAGGAGAGAGTGGGCAGGAGTAAGG--AGGCAGCCGGCCAGAAAGGGGATAAGGGAATGAAGCTGGCCAGGTCACACTGGACCTTGAAGTCTTGTGACGGGGTATGACTTATCTGGAGGATGGTGGGAGCCACTGCAGGCTTTCAGGTATGTGTGTTTGGTCGGGGGACATGTGATCAGGTTTTGGTCTTGGAGCCCAGAGATGGAGTGGGGTTGGGGAGGGCCAGGGAGGCTGGACAGACCCCTCCCTCCCAGCAGGCCACCAACTTGATGGTGCTGATGGTGTCCTCATAGTAATAGCAGCGTAGCCAGTTGGTGGGGTCTTCCTCCTCTGGGAAGTCCTTGAGGATCTTCACAAAGGACACTGGGAAGATGCCTGTGGTTCCCCGGACAGTGCCCTGAGGGAAGAAAGAAGACACTGCCCTGTGGGTGCTGGGAGAGGCAGCAGGGCCATGTCTCGGGGTCCTGCCCT-TTTATAATGATGA a score=12282 s mm7.chr15_random 3874774 572 + 7075849 tctccacttccacctccacctcag-cccttcctccaatctcatctccatctgacctccaccctcacctccaattccacttccaccccATCATCCATGTACTCTGCCATCACCCTCCTTCTTGCCTCTAGTTAGTCTTCCTGATTCTGAACCCCTCTCCCCAGCTTACCTCCAGCCAGTCTTTGTTGATCTTACTGAGAAGGAAGATCACATCTCCAGCTTTGAAACTTAGCTCCAATTTGCTGTTCCCAGTGAAGTCAAACAAGGCCTGAGGAGAGGGACAGCATTGCTGAGACAGAGAGAA--------CGCTGAGTCT---TTGAAGGGCTTGAC-CACTGTGGTGTCCCTCTCTGTAGGTAAGGAAACTGAGGGTTTGGAAGGGTG---------CTGATACAGCCCCTCTGTTTGCAGAGGA----CTTCGATTAAAACCCTACTCTCCCCCAACTACAAAGTGGGTGGTCCTTTCAGAGCAGGTAGGGTTCACATTTGGAAGGGGGGAATCCAAACTCTGTGCCTAGCTTGCCCTGCTCCCCCGCCTCGCTGGCCTCCCTATGGGTTACAGCCCTCCTGCATCCATCCCACTG s bosTau2.chr5 31371314 528 - 76426644 TCTCAGATCCCTCCTCTTTCTCTGATCCCTCATAGAATCAAAACGACTTC--ACCTCCAACTT-ACCTGCAACCTCACTTCCTCCTCATTTTCAGT----------CTCACCTCCATGCTCACCTCCA--------------------------------AACTTACCTCCAGCCAGTCTTTATTGATCCGACTGAGAAGGAAGATCACATCTCCAACTTTGAAATTCAGCTCATGTTTGCTGTTCCCAGTGAAATCAAACAGGGCCTGGGAGAAGGAA----ATGGTAAGGAAGGAGGGAAGAAACATTCACCAAGTTCCTACTACAGTGCTTTACATACTCCAGTGTcccatttaacagatgaggaacctgaggctcagggaggatgagtgactttctgatgc-tccactctatttgttagggagaagccaggtttagaacccaggtct-ccctgactccagagcagctgctctttcca----AGCCTGGGGGCATGAGCAAGAGGGAAGGGTTCAAACTCC---CCGGACTTGGTA-ACTTCCCCATCCCCCAGGCCTCACTGGGGA--------CTCCTGTGCC---CCCATAG a score=5447 s mm7.chr15_random 3875346 479 + 7075849 TTCTTTGCCATGGCATTTCATGCTGTGCACCCAACACC-ATCCAAAGTGCACAGTGGCACACAGCAGGAGGGCGCCACAGTTGCGGCGGATGAGGTCTAGCCT---------------GTGTGTGGGTACCTCTGCTCTTGGCGCTTCCATGCGATCCATGATGGCCCCTTGTGGAGACACACCCTTGCTATGGAAAGAAAATGGGG---TATCAGCCTT-----------------GTGGGTCCCTGGAGATGCAGGGAGAGAAAGATTATGCGCAGCCACTAGTCATGGTTGGTTGCTCTTGC-CGCTAGCCCTTCATCTTGTATTCTCACCACTGCCCCAGGTGAGG----TTGCTCTCCCACAGAAGACCCAAAGGGAGA-GCTTGAAGAAGGAATGG----GGATCACGGCTCAGCG-------CCCTTAAGTCTCCAC---CAGACCTCAACC---------------TGGCTCTCAGA----GCCAAACTCTCCT-----------------------GCAAAGCCGGAATTCAGACCCTGCCCTCTTAGGTGCTTTGGCGGA--GGTCAGG s bosTau2.chr5 31372084 553 - 76426644 ttccctcccctcccctccccCGCCCTGTACCCAACCCCCGCCCTAGGCACACAGTGGGCACCAGCAGGACGGG--CTCAGGGGCTGGAGATGGAGCCAGGCTGCTGCCCAGTGGTGAGGTGGGATGGTACCTCTGCTCGTGGAGCTGCCATGCGGTCAATGCCAGCAGCTTGTGGGGACTCGCTTTTTCTGTGGAGAGAGAAGAGGGGCTTGTCATCCCTTCTGCTTCTGTGCCGAGGAGGGCCTCAGCAGA-----GGAGTTAAAGAT-----GCAGCTACAA-----------TTGCTCCTCTGTGCCAGCATGCTACCCACAGCTCTCATC---GCCCTGGAGGAGGGACTGCACCCCCCCTCTGTGGACCAGAAAGCAGAGGCTCAGATAAACATTTGCTTAGGGCCATAGCTTGCCAACTCTTTCCCGTTACTCCCCACACTCAACCCCTAATCTTCCAGCTGAGTAAATGGGCTTCAGAAAGTGCTGAGCTCCACTCCAGGACCCAGGGTTGCTGTGGGGCACAGATGGAATTCAGGCCACACCTGCCTGGGTGCCTGTGGGAAATGGCCAGG a score=9786 s mm7.chr15_random 3876048 386 + 7075849 CACCTACATTTTGCGCGTGCGCGGTCGGAGCCTGCGGAGTGCCTGGGGCACCTGCTCAGCATCGTATGCAGACTGATAGAAGAAGATCCTGACGTCGGGGTCCATCAGCACGCAGACCGGCAGGCTCAGGAGGTTCTGTGT--------GAGGAGGGACAGGTGGGCAGTCGACGGAAAGATCTAGA-----CAGCCCTAT-----CAACACACCACCCCGTCTACCATCT---------CTGCTAATGCATTCTCAG-CTGATAACAAAAAACAAAAACAAAA-ACGTTACTAGTCCTCAGC-GATTGAAGGAGACAATTCCCAAGCTTTGCTCCTGGCCCAGCGTGAGCGGGTAGTGGGGAGGGGAGGGATGCTGGCTT---AAGAGGTCATCT-GAAATCACCTAAAGGTCTCCAGA s bosTau2.chr5 31373309 394 - 76426644 CACTTACACTCGCCGGGTGCGCGGGCGGAGCCGCCGGAGCGCTTGAGGCACCTGCTCGGCGTCGTAGGACGACTGGTAGAAGAAGATGCGAACGTCCTCGTCCATCAGCACCCAGATGGGCAGGCTGAGGAGGTGCTGCGTTTGCCGAGAAGGCAGGACAGGTCGGGGGTCAGCAG-----TCTTGGCATCCCAGCCCCATAGCTCCATCCCCACTCCCCGCACACACACTATTCCCCGGCCATTAATGCATTCTCTGCCTGATAA--------AGAAACAAGATATATTTTGAAATTTCAACAGGGTGAATGAAACATGTCACAAGATCTACCCCCG-------------GGTTCAAGGTCAGGAGGAACCACCTAACTTGAGAAGAGCTCGTTTGGAAAAGACCCACAGCTCTCCAGA a score=3807 s mm7.chr15_random 3876459 89 + 7075849 CAGAAACCTGTaagctaggatcagaaagggaaaaggatctgcacagagccacacagcttagt----aacacagctggggcATCCAGAGACACC s bosTau2.chr5 31373782 92 - 76426644 CAATAACCTGGGAGtgagggtcacagaggtgaagggacctgcccagggccgcacagcctagtgagcgacagagct-ggtcacccagagccatc a score=3027 s mm7.chr15_random 3876880 137 + 7075849 AAGGCGTGAGGACATGGAGCAGTGGGGAC-TGGCATGGCTACCAATTCAGTCC-CACAGGGCTCAGGTACCCTGGAGCGCTGAGGCCACTGTACAGGAGCTACAGTTCCAGAAGCATCCAGATTTCTGTGGGAAATCCC s bosTau2.chr5 31374113 138 - 76426644 AAGCTGCGAAGATGCAGAGCACCCAGAACCTGGCAGGGTCATCCCTCCAAGCTGTCCACTGCACAGGTCCCCAGGAGCACTGCAGTTGGCTT-TGGGTGCTACAGCTCCAGACGCACCCAGAGCCCCCCCAGAAAACCC a score=3463 s mm7.chr15_random 3877023 175 + 7075849 TTACAACCTAGAAGCAGGTTCACAGTTCTAAAACCCCCTTCCCTTAATTTTCTCAATAGAGCCCAGCTCCACTCATTGGGAGCTGAGAGCCGGGGAGGGTGGGACTGT-TCGTCTCATAACAGAAGGAAGCTGAGACTTCCTGAGAGAGGACTGCTTACTCGCTCCAAAGCACCCA s bosTau2.chr5 31375412 161 - 76426644 TCACATTCTGGAGGCAGGTTCACAGTTTACAAAGCACTTTTCTGTCCTTTTCTCAACA----TCAGTCCCCTCCTGTGAAACCAGAAAGTTGGG------GGCaccatctcatttcatag-gcaagaaaactgagacct----agataggatgagcaattaatcctaaatcacgca a score=9513 s mm7.chr15_random 3877278 734 + 7075849 TGgcttgg-atgctactgttg-acagggtgctcactaccttgtaaggGTCTCCCCTGGGCCGCAGGTGCTCTGGGGCAGGCACTGCATTCCA-----------------GAGCTCAGCACAAATATTCATTCCTTGAGCTTGGTGCACTCAAGGAT-TTGTCAACCGTGACTTTTGTGACCCAGCTCCTTG--ATCCCGTCTGCATACCTTGCTTCTCTCTCCAG-CCAGGCCTTTCAGGATTGAAGATG-GGATCGTGGAGGCCTCAGGGA-AATGTCAGTTTTCAAACTCAT----GCCCCACAGT------AATACCCTGCCCACTCAAACCCCAAGGAG--ATGTGGC--AGCAG----GTACCTTCATGTAGGCATTGAGGGCCGGGATCCGAGTCTCAGCGATCTCTTGTTTTGCGCCCATGTAGACTTTGGCTGAAAAGA---GAAAAGTTGCCCAGAGCCTGGACCATACGGTGCCTACTCTTCAGCTGCCCCACCAATCAGTGCTTCTCCCCAATGCTCCTCCCCAGCCCAGAGCTCCTCCCCAGTGCTCCTCCCCAGCCCAGAGCTCCTCCCCAATGCTCCTCCCCAGCTCAGGGTTCCTCCTGCCTTCTATCATGGTACCAAGTGTCACCGAGA--TACTTTCCAAC-CGCATCTTCCCATCATACCATCAGGAGAAGGCA--------GAAGGAGCTCTCAATGTCATGCCTGCTCCTACACACAAAGGTGTGTACAGGTacacacacactcatatgtatgcatgaacacacatacatg s bosTau2.chr5 31375990 691 - 76426644 TGGCTTGCCATGCCCCTGTTATACAGGCTGTTCTTCATCT-GTCTGTATTCCCATAAGACAGTGGGGACCTCGGGGCAGGCATTGGATCCTATTCTCCTCTCTACCAGGAGGCTCAGCACAGCCATTAGTCAGTTCAAGGTG-tgtcttcctgaatcttctccactgc-----tcctgccccatccccctggaaccctgagaatatgtcctgtttctctccccaggcctggcctttaaggattgaagatgagggccatcaGAGCAGGAGAGCCAGCCCCAGTTCCCAAAGCCACCTGGGCCCCTCCCTGTGCTCAGCACCCTGTCCCCTC------CCAGGAGCCACGTGGCCTAGCCCCGCCTTACCTTCATGTAGGCGTTGAGGGCAGGTATTCGCATCTCGGCAATCTCCTGTTTCACACCCACGTAGACTTTGGCTGAGAAAACGCAAAAAGCTGTCCTGGG-------------------------AATCTGGCCCAATAG-CATTGTCT----------------CCGGGCCAGGAGCTGCCCACCGG-----------AGGCAGGAACCCTTTC-----------CACTAGCTCAGCGCTCCTCCCGC------TCATCGGCCCACGGCGCTCTGGGGGCCACCATCCAATGTGCAt-tctctgttatactatcatcagctgatacttttcttgttttaactgtttatctattgccttttcctacacac------gtacacagacacacgcacacagacac----------acacacacacacg a score=4802 s mm7.chr15_random 3879184 816 + 7075849 AGGGAAAGGGTGTAGGAAAGGGGGGGG----GGAGATGGAGAGTGGTGTCTCCTCCTCACCACTCAGAAGTGGGGGGAGTAGGAGCTATGAGGTCCTTTGCCTCTCAGCTCAGTGTCCTTTTTGGAGATGGATGA--------------AGAGAATGTGTTTGGGGGACAGCACACCCA-CAGAAGGTGGG--------CTGGAAGAAGGGAAGAT-GGGCAGGCCTCTGAGGCTTAGGGAAGATGTGATATGATAGAGTCAGG------AGCAT----------CTCCA-------AGGACTTTCT-----TGGGC-----AAGCTCGG------------GAGGAGGTGGCAT---------GGGAGATTTGGGAC----GAGGGGCATATGGGAAGGAGAT-GGGGGACAGGGGTGGGATTAGAAGC-----TATGTGTGGCTCCCTGCTTCCCCA--AGGGCCAGAGAGGGAGAGCTGCAGTCATCTGTTGAGG-CTGAGGCTGTGTGGCTGGAGAGCCACCCTCATGGGTGGCTGAGAGAGG---------------CAAGAAAGACCAGAACCCA--------------------GGTGCTGAGTGCTCCCAGCCCAGGCTCCCTTGGTAGCAATGGCTGTGGCAAGATGGCTGTACTGTGTCCCCAGAG----GTAGGTCAAGGGTTATGATGCAGAAACTGTAGCAGTGAAGGTACCCTGAAGACAGAGGGGTGGCAGGCAGAGGGCTGCTAGGGGGGCACTGCCAGCCTATGGCT---ACAAGAGGGGCACCAGCCAAATGCATCGTTTGCA-------AAGAGGGTT------------GAAATAACATGCTGCT------GAGCTGGAAGGTGAGGCCAGGGTCAGGGCCAGCTCCGGGCGTTGGACAG--AGT-GCAGCCTACCTGGCAATGTGGGCAGGCTGCAGGTGAAAGGGCTGTTCTTGCTCTC s bosTau2.chr5 31378241 899 - 76426644 AGGGACAAGCTGTCAGGGAGGAGAGATCAACTGAGAGCAGGAGGGGCCCCTCCTCCCTGCCACCCAGAGATGGGGAAAGGGTGAGTGAGGGAA------------CGGGTGAGTTTCCTCCCTGGGGCTGGCTGCTGGCTGGGAACCTCAGGCACTGGCTAAGGCAGAGAGGAAGCCCAGCTGGAGGTGGGGTTTGAAGCTTGAAGAAGGGAAGGTCAGGGAGTATTTTGCAGCCTGTGG--GGTGGGGCA-GGCACAGCCAAGGCACACACCATGAACCCTATACCCCACTCTGGCAGGGTTCTCTCCTGCTGGGCTCACGAAGGCTGGCCTTGAGAAGCCGAGAAGTTTGCACCTTTCCAAGGTGCGTGTTAGGACCGAGTAGGGGTGGAAGGCCAGGAGACAGGGGGGTGGAGGCCCATCCAAAAGCAGCAGTGGGTGCGCCCCCACGGTGTCCCAGCAGAGCAGGGAAGGAGGAGC-------ACCCATGGGGGACTGAGGA---GTTACAGGGCAGTTCCCCTC--GAGGGGCTGGAAGATGAGTCTGTGTTTAACATGGGGAACACAGGGATCCCTGTCTCCAGGAGGAGAGGCCGGGGCTGA-TGCGCTCAAACCTGG------TGGTGG--ATGGCTAAACCGGGGCAGCTGCGCAGG--TCATAGAGCACAGGAGGTCAAGGGCT---------------CAGAGGTTAAGG-GTTCCGAGGCCGGAG-------AGCCAGAGG----------------TGGCAGCCTGTGACTGGCAGGAGGGGGGCATGGATTAAATAAACAGTTTTCACTAAAATAGAATGGTTTATGCTAAAACAGAAGCACCGAACAGCACCCAGAGAGCTGGGAGGAGAGGC--GAGCCAGTG--GGCTCCGACC-TGGGGCAGCCAGTCGCTGCCTACCTGGGAGCGTGGGGAGGATACAGGTTAAGGGGCTGGTCTTGCTCTC a score=6323 s mm7.chr15_random 3880501 454 + 7075849 ACAAAGTGGCTGGTGAAGCCCCTCTTCTCCTCGATGTCAGCGATGTTGGCTGAGACGGCCACATCGTCTGGAAGCTGCTCAAAGTCGCTGTAGGAGGCCAGAGGGAGGGGA---TCGGTTACCACCTTGCCTGCTCTGGACACAGCCAGCTGATGGAGGCCTGCAC--------ACCCCATTC----TGAACACTGTCCATGCCTGGCACCTCACTGAGGCTGGGAACCCCGAGATGTCAGGGCAC-ACACAGGTCAAGCCCTGAGAATGAGGGGTGCGGAGCTGGAATTG-GTGTCACCA-----GCTGGCTTCTAGT--------------CCAAGCTACCCA---------AGAACTTGCCAGGTCCTGGTGCCCATTTCGTGCCAGCCTTGTGCCAGGCTCTGTGTCACAGGATGAAGTGTGTGCTGGGACTCCTGAAGGGGTTTGTATGGGTGTCCCCTACAACCCACAGTTAATGGACATCACCACTGGGGAG s bosTau2.chr5 31379606 421 - 76426644 ACAAAGTGGCTGGTGAAGCCTCTTTTCTCCTCAATGTCAGCGATGTTGGCTGAGATGGCAATGTCGTCAGGAAGCTGGTCGAAGTCGCTGAGGGAGGTGGGAGGAGAAGAAATGCTGGTTATCATCCTG------------------AAGTGTTGAGGGGCTGCAAGGTGCAAGGCCCTGTGCCAAGTGAACCC---ATATACCCAGCATT---CTCTGTTCAACACCCTTCACATGCCAGGCTGTGACACAGACCAGGC--------------GTCTGGAGTTGGAGCCACATGTCAACAACCATACTAGAATCTAGCAAATCTCTGTGGGGCTGCGTTATTCATTCAGGAGCAGAGCAT--CAAGCACCCCTGCCTATTAC------ACCCTGTTCTAGGCCCTGGGTCACC------------TGCT-----TCCCAGAGAGG-----ATGGCTG----------ATTACACCcagggaaaatcctcacagaggag a score=304 s mm7.chr15_random 3881224 622 + 7075849 ATGAGGCTGACAGACAGAGAGCAGCCCACATCCCCCAGCCAAGAGATCGGTTTGTTGACTATGCCCaagtaaggaaaaacttcagaaaggtggagtttgagctcttggtgggtcaactggaattcactggaatctaggaaggttcttccgggtagtggaaatggctcgtgctaaggttctgagccctgaggaagagtttagATTTGCTGAGAGCCTGGTGGGTCTTAAGGTGGATACGTTCATATGAGGGTCTTGAGATCAAGGAACTAGGTGGTTCAAGGAGGTCACCACAGGTGGCCAGCCATGAAGGAGGGGGAGAGACTTAATGAGACAGC-TCCATGAGAAGCTCCGACAGTGAAGGGTGATATCGGCCAGGACATGCAAATGATAGAGAACCCCAGCACAATGCTAGAGTAGCATTCCATATGTTCCTGCTGTTTTGGTGTTTTGTTGTTGTTGTTGTTTTTTTTTTCCTGGCCATTCAAGTGCCAGCCATGCTCA--ATGTTAAGTGTGTCTAGCTTGGAGAGGCATGA----TTGGCCTGGACCAAACAT--TGCTCCTATTCCTA-ttcccacctgcccttgaggctcaacacaaccatgtgactagctctggtcaatgagat s bosTau2.chr5 31380193 465 - 76426644 atgaggc---caggctgaggaggGTCTCCAGAGCCGAGCTAAGGAAT---TTTATAAGCAaca-gggagccatggacagcttcagaagag---------------------------------------------------------------agtgaaaa-----cgcaacagggctctgg--ctttaggatg---ccaactctggcagtggcgtggagag-aaaaaggagggca------------------gagactgggggacagagcgccactgggaggctctgacgtg-gtccagc--tgagagatgaggtgggcctgagccagacagtggggataagaagagaagACAGACAGGAGGGATACC----------------TGATAACAGACACTG--------------------------------TGCCATTTTTGTGCCC--------------TCTGCTTCTTCCTAACTAATCAAGCTCCAGTTCTTTTCACGATGACAAA---GCCTagccccaaggtgataggtcacttggcctgagccaaacataataatcccattgctgtttcccagacccacttgcagctaggagcagccatgtaacctgttgtgaccaaagagac a score=10012 s mm7.chr15_random 3881846 570 + 7075849 ggagttggggtggcatctgGAT---CCACAGCCACAGTTGCACCCATGAGGCAAAAACATGATGCAGAATGA------AAAATTCTGCAGGGCTGGCTTTGAGCCCCCTGAGCTATGGAACGAGTTGCAG------TCTGGACTT-TTACTGTGAAAAAGAAC-AACTGGTCATCATTTAAGCCAAGACCAGACCAGCCTTTCCCTGCAGTCTAATGCATTTCCAAGGGATAC-----------------------------ATGACCA--AGGTATAGCAGCCAACCTGGAC-------TGAAAGAAAGAGCCACGACAAGAGTGATGCCTGT------------TTCTGACCAGCACAGGAAGA-----GGCAGGGCTG----------CTCAGGCCTCACTAAGGTGAGATGTCTCT---------AGGTAGGCATCCAGCAGGAGGCTGGTGTGCAGGTGTGGAG-ATGGCAGG--GTGGGGCTGACGTGTG-----GTTAAA---------GTGAGAGCCACCTGCCTGTGGCTTATGGCTGTGGCTAAGACTTAAGACCCTTAAGTGA---------------ACTGGAGAGGGTTGAGAAGGGCAAGCAGAGAAAGAGGAAGCCGGCCACC-------------AGGCACAGCCAAGGTCAACCG--TCTGTCACTTGTGTACAGACCAGGAAGCAGGAAG s bosTau2.chr5 31380767 690 - 76426644 aaagtagatgtgacatctggacttgcagcagccaca-ttgcattcatgaggcaaaaacgtg----ggaatgatcacaggaatctctgggactctggtcctgaagtcactgagcggcagaaccagttgtgacctacctctgaacttctcattatgtgaaagcataaacctctgtttgtttcagccactatcagttcctctgttctctgcagccTTCTGCATTTCCAACGGATACACTGGTAATTTACGAGTCattccagagttacgaccagcagggtttggggactgtttggatatagaggtgaaagaaagggcagtgtcaagagtgacgcccacatattacccgtattgtgaccaggatgggtggaaggggagcagggttgatggacacattttggaacgtgctaatctgagaggcccctggggcacccaggtcatgatcctgca-aaagttggtgtgtggctctggagtcctgcagggagtggagttgaagaGGGTCCCAGCTGGATTGCGAGTGGTAAGAACCTTCTGCC------------CTGTGACTAGTGGTTAAAACCCCCAGGGAAGAGCAATCCGCGAGCAGAGGAGGGGATTGAGAGGGACAGATGGAGGAAGAGAAAACGGAACACCAAGGCGGGGGAGGAGGAGCAGCTAGGGTCACCCAGTCCAGCCGCTTGTAGACAGATGAAGAAATTAGAAG a score=4699 s mm7.chr15_random 3882972 407 + 7075849 GGTCCCCTGGGACCTGGTCTGTCCCAGGATGGTGTATCTGGATTCAGAAGTC---ACCAGGCAGTGACTGGGGAAGTCAGCAGACCAGCAGGGGCTGTCCC--------CCAGGCTGGGGCACCTCTGTGGTCACTGGGGCCTTCCCACTCGCTTTTCA-ACATG-TCCCATGA----GGACATCCTCTGAAAGAGTGGCCTCACCCACTTCCCC-----------------------------------CAGAAGCTGG--GGTGGGGCAGGAGGGAACTGGAAAGGGAAAAATAGCCGTTGGCCATTCTGGAAGTTTGGGTAACACTA---ATGGCTGAGAGTGCTCACACCACACCAGGAACTGGGCACCTACTCCTTGGAGATAGAGCCACCTTGGGGTAGGGTGATGGTGAGGCACCGAGAGGTTATGGAGCTTGCCC----AGGTGAGGTGAGTGGGATTCG s bosTau2.chr5 31381570 427 - 76426644 GGCCCCAAGTGACGTGGACTG---CAGGGATCTAACTCAGGACTCTGGAGGCTGGCCCAGGAGGTGACTCAGGATGGCAGTGGGCAGGCACAGGAAATCCCTACCACTCCCAGGCTAGCA-------------------GCCTCCCCACTCACTTTCCACACAGGGTCCTATGGTAACAAACACCCTTGGGAGAAGCTTCCTCCTCCACTTTCTCTCCTGAGACGGTGAATTTCCTGACTATTTCACCTTCAGTAGGAGGCCGGTGGGGCAGGAAGGAACTGGAGA-GGCAGAACGGCCCTTTGCAG----GGAAA--CAGGTAATGGTAACTACAGCTGACGATGTCCTAAGCACATGGAGCACCAGGGACC----CTTCTAAGACAGTGTCACCTTTTTCCAG------ACTGAGGTAC--AGAGGTTAACAAACTTGTCCCAAAAAGTAAAAAAACTGGAATTTG a score=4253 s mm7.chr15_random 3884570 587 + 7075849 GGCCCTAGGACCTGGGTCCATGGTCCTATCAGGGGCAGAGGAGGAGAGCCACCCCCCTCAGAGGGCGGGGGAACAGCTGTGGAAAGGGCAGAGTGGGCGGAGGAAACACTGAGCCCTGATAGTCCTTACAGGCACCATCT----GAACTCTGCACCCCAAGAAACAAGAAGGGACCCAAGCTTCTAGTGGCTACAGTTTCTAGAAGATTCAAGTTTGCATGTCTG--TCAGTCTCCTAGGAGAACTTGGGGGTGAGAAAGGCTGGAGTC-----------------ATATTATGC------------------AGCCTTACTTAGCACCCCAGTAACACTCTCTATAGCTATGGAAGG--------------------------------------------------------------------ACCCCCACCC-------------------------AACACTAA-----------------------------------------------------------------CTCTTGT--------TACAGACAAACCTCC--TCTGACCTTTGACCTACAGGAATCCCATCCCCTTTTCCAGAT---------------CCCACGAGTGCTTTGCT-CACACCTGGGTCTTGTCAGTCAGACCTGT-TCTGGTGACTCTC-AAGCAGTTCACATG-------GACACTTGGCTTCCTAACGTTGCTTTCTGCT-TGATCCAG-------GGGAC--GGTTCTGT-CATTTGGGTCTCCACATGCAGATGGGAACACAGGGCTGTCTCCATAAGAGACACTGAGCAAGT s bosTau2.chr5 31383712 810 - 76426644 GACCCCAGG-CGCGGCTCCATAGCCCCATGAAAGAGGGGGGAAGGGCACCTTTCCCCCATAGAGGGGCAAGCACAGCTTCCAGGGGACCAG---GACTGGAGGGAGGGGTCGGCTCTG------------GGCATCATCTCTCTGACCCACATGCCCTGAGAAACAGGAGGTGCACCA-GCCTCAAACAGCAGCTATTTCCTGAAGGTTCAGGTTTACATGCCAGGCCCAGCCTCCACTGAGGACTTGGGGGCTGGAGGAGCTGGAATCTGTGGGGGGACCTGAGGACATAGGGCTTGGCTCCTGCCTTCCTGAACCTCACCCCAGCCCCCAGCACCACCCTCTGTGGCTCTTGAAGACCATTCtttttctttttttggccgcactgcgtggcatgtgggatcttagatctctgagcagagatcaaacccataccccctgcagtggaagtgcagagttttaaccactgaactgctaggaaaatccCTGGAAGGGCATTCCTGAATCACCCTCCAAGCATTTGCATTTGATATCCCTCCTGCAACACATACACACACACACCTTCCTTCTGACATTTGACATTCAGGAATTCCATCCCGGCTCCCACTTCTAGCCGCAGAGTCCCCCAGGGGCCCTCTGCTGCCCACTTCAGCCAGACCAGCCTGACCCATCCCTGGTGACCCTCTGAGCCACTTCCATGCTTTTACCACACT---CTTTCTGATGTCATCTGCAGCTCTGATCCAGAAAGGCAGGAACCAAGCCCTATGTCCTCAGGTCCCCCCA--CAGCTCAGAGCACAGGCTGACCTACCGAGGAAACTCAGAGAATGT a score=14346 s mm7.chr15_random 3885380 1551 + 7075849 ATTGTGCCAAGCATCTAAGACCTGTTCAGGACAAGGAAGTGGAGTGAGGGGTCAGACGGCAGAGCCTGGGC--------------------TATCTGAACCTAAAGATAGGAAAACGCAGAGGCCAGTTTCAGT--------CTGAAGGGCAGATGGAAGAGCCGCTCCTGATTgcagtgtggaaccaggaacccagaacccaagcctagcacccaggacacctctgctccc----aggctctgccacccactcaccctgtggtccttggccacatccaagccactccccat-tctgagccttaggcttcttactggtgcataacactgccgacctACTAAGTCAAGGTTC---TAGAAACATCTGCTGGAGCATGCAGCTCC-------TGCAGTATCATTCAGC--AAGACCTTCAAATTTGACTCTGTGCTGATCCACTGATATCAGGTGACAGGAGGGACAGCCTCTTACTTCCCCATACCCACCCCCCAGGCCTATTGGGATCATTGAGAAAGCCTGGCAGGGAATAGAGGCAC-ACTCTCACCTCTCTGATCGCAGCTGCTGGGCCAGGGCCATGGCTGTGGGTAGTCAGAAAAGCAGATGGATGGGGGCCTTGCCCAACCAGATCCAGGCCGAGTTCACCTCTCACTTCCTCCTATGTGCATCTGAGAGCTTCCTGAAGCTTGGGGT-------GTCCCCAGGGGCAGCCTTTGAGGAGGTCCCGCCCTGCCCAGCTTCTCTGGACCCTCCTTGAAGTACCTCCTTCAGGCTTT---GAGCTGCCTGGCCCTCACACGTCTTCTCAGCCACTTCCCAGCTGCACAGCAGTTGAGGAAGTG-GCACCCTTGGGTGCTGGGCTTGCGTGAGGCCACTGGC------------TTTGGGGATTTCCTCAGTGCCTGTCTCTGGTG--------------------------CTGAGCTCCAC----------------------------CCACCATAGAGCAGTTTTAGCCCTGGGTAGTC-CATCAAGGACACTTGTGGACTT-----------------CCTCCTC-------AGGCTTCTTCCTGAATCCCTTTCTCAAGC----------ATCCAAGACCTGCCATTCATTCCTAAGGT-CTGGTGGAGATAGTGCTTTTTCCAGGAAGCTCTCCTGGTCCCCCTCCC------------------------TCTTATACTAGGAAGTCA-------------TTGTTTTATGCCCCAT---CTGGGGCTCTGGGCT--------------CTGAGATAC--------------------CACATTCAGCTCTCC---CAGAGCTTCCATCCACACAGAGGCTCTCCTTAC-AATCT--GCCTCCACCTCCCTACTCA--------------------GCTCTCAGAAAAGCCCCAAGCCCCCG---CTG-CTGGCTTCAGAATCCCCAAGGCCCCGTGGGCT------GCCTGCTCTCC----CAATCTCTCTTCCCTCATTGCCACCA---CATTCCC-------------------------------------------------------AATGCTCCTCTCCTATCTCCTGTAGGTCTCAGCTCAGAAGCTGC-------------CCTCTAAGAAAC---------AAACCTGTCCTCACCAGACCCTCCCTGCCACTCT-----------CCGGGCTTTTCCTGCGGCAAGCTCT---CACCAGCGGGGTTCCCTACCCCAGTGTGTTCCAAACGTGTGTTTGTGTGTTAGGCTTCTTCCAGGCCAGCAC---------TACGCTGCGGACACCCAGATTATGTGAGCAGAAGGAGGAAGTTCTTCGTCAGCTCCTTCTAA--TGCTTGG--------TTCTGTAGGGAGCTCTCCAAAG s bosTau2.chr5 31385337 1838 - 76426644 attatgccagagaagtaaggactacacagaagaaggaaacagggtaagtgtttggagggggctgttaaggaaggtttcttgaaggagttgacatttgagcc-aagccctggaAAACA-----GCCAGATTCTGTGCCTCCATCTAAACAGAAGATGAAA-AGCCATTACTCA--ACACTGTGgagtagtgaggtc----------ccctgggccccagacacctgagttcccgtccagactccaccacccactc-ctccgtgaccctggga-------aagtcactccccctctctgaacctcagtgtcttcacccatgcctgagggaagtgagccaCTACTAGGAGTTTCCTTTAAAAAGTTCT--CAGAGTCTGTATTTCTGAGTATTTGGGGTCTGACTCAACTCCAACCTCTCAACTTT----------TGA--CATTGATAAGCGGCTGCAGGACGGTGGGCCTCTGCC--------------CTGCAAGGCCTGCCGGGAACAGTGAGGAAGCCCCG-GGCGGGCAGCGCCCCTGCACTCACCTCTCAGCCCGAAGTTGCTGTGCCTTGGCCATGGCTGTCAGT--CCAGGGCAG-GGGTGGCAGAGGTTCT--CACGACTGGGCCCAGACCAAGGTCACCTCTCACTTCCCTCCA---------GCTAGCCTCGTTTAGGCTGTGGTCCCAGGAGTCCCCAGGAGCTGCCTCTGGGGAGGCC---CCCAGCCAAGCTTCTCTCAGCTCTAGAAGAGGCTCCTCCTCCAGGCCCTCTGGGGCTGGCTGTGGCCCATACTTCCTCTTCCCCACCATGCAGATGTACCATAGCTGGGGAAGTACACACTCTCTGACGCTGGGTATGTG-GGGTACACTGATTTGGCAGGGGCATTTGGGGACTTCCTCGATGTCAGTTCTTGGTGCCAGATCTTGGCTGGGTATCAGAGACCTGCTCTCCATCAGAGACTGGGCCTCAGTGCTGACTCAGCCACCAGAGGGGGCTTACATCCTTGGGGAGTCACTTCACATCCACT----GACTCATCacacccagcctgcaccccctcactgtcgagactttaccc--aacctattccctaagctgggagtgcgggcctccacctcaccttccttcccaaagtcctctctcagatgccacctcctccaggaagccttcctggtacccccaacaaaattagtgctcACAGGCACTTGTGTCATATTAGAATGTGAGGGTTGGTTTATCTTTCTCTATTCCCCCTTTCCTGGAATTCTGGGCTGCACTTCTCTCATGCCTAGATCCCCAAGCCTACTTGGGCCTGGCACAGCCATTTCTCCCTACAGGGCTGCcaaccagagtgagcatcacattacaaatctgagcatactcttccctgcttaaactttaactgcttcaccctgcactaggagaaagtccaaacttctagtcctgtctgcctccaaagttctgaacaccctactggcttccccagccccctctcctgggctatttccttcccacaatggcctctagtccatttctagaatgttccaagatgtcttcccctcttagccttcatgcaggctgtttctgctggaatgctcttc-cctgtctcctttagggctcatcttggaagtcacctcttccgggagaccttccaggaacctgaactctaaatatgtcccc------ctctctctgctattctctcccagatccctgtgcttctgctttag--agcattgagaactattgtaactccatatttgtttgtatt-------tttatatgtctgacaactgtcttcccagctagtgcagtgcctagcacgttgcaagtgctcacccaatattcagggaatgaaCATGAT-TTTGT--GGCCCCTCTAACCTGTATGGCTATAGAATTCTGAAGGGAGCTCTCCCAAG a score=6158 s mm7.chr15_random 3887046 610 + 7075849 GCTCCTATCTCCCCAACT------------------------TTGGAACGTGGCT--GTGGGGACAGGGCTTTCCCCCTGA-----GGAATCTGGAACGGCCTATGT-------------TTCTCACCTTAAATGGGGCT--GGATTGGAAGCAGTCTCAGACTCCTCAGG---ATCTGGCTCCAAGAATATAGAATGTTT-------TAGGATCCTTACTTTAAAA--TGTCCCCCCTCCATCCTGTCACCCTGAAGGGATCTTCTGGCCCTGACCCAGCCCAGAGAGGATGAACCTAGAGCTCCCAGGATAGAGTCTG--------------------------CCCAGTGAGAA----CTGCCCTCCCCGTGGCCAGGC--------AGGGC----------------------ATGGGCTCCTGGGGAGACAGAAACGAGGATGAAGAAAGTCACAGGAGGGGACAGGAAAGTGGGA-----GAGGGA--CACTCCACCAGTGACTGCATGTTCATCAAGGCCTTTGCACTGCACAGATAGATCAGGGTGGTAGAG-GAACGTAGAATGGACGGTCTGA-CCTACTCCCAGCACACAGAAGTACCGC-AGTTCACAGA--GTTAGCTCTTTTAAGCATACAAATCCCTGCTCAAGA-CAAGGAAAGGTGATCTGAGAGGTCTAAGACGAGCAGGAATTGTACCCATG--------------------------ACTGAGGATGGAGACTGATACCCAGGCCTA s bosTau2.chr5 31387331 747 - 76426644 GGCCCTCTGTCCCAAACCCAAGCTGAATTAGGGCCCGCAGGGCTGGGACGAGGCTCCGTAGGGACAGAGCCAGCCCGGTGGAGCCTGAAACCAGGATCTCCCAGTGTAGTTCTTTCGTTGTTTCCACCACACA-GAGACTGGGGATAAGAGTCATTCTTAGGATCCCAAGGGCTATCTGGCT-CACAAATGAAGGACAGCTGGCAGCCTCAAGCCCTTCCTGTAAACCTCATCCCCACTCCACCCAGCCA-CCTCAAGGGACCTTCTGCCCCAAACAGAGTTCAG---GGCAGAGCCCAAATC-CCCAGGAGGCAATATGCTCTGGGCCCAGCACTACAGCCCTGACCCAATGAGGATCTGCCTCCCTTCCTGCAGCCTGGCCAGGGTCAAGGGCTCTTCAGAAACCAAGATTCTTTATGGACTCCTTGGGAAGCAGGAACAACATTGGAGGA---CAGAACAGAAGACAAGAAAGGAGAAAAATGGAGGGATGTACCCAACCA---ACTATTTATCAAACAGGGCATTTGGAATACAGAGATAAAC----ATGGCAGGGTGAACACAAGTCAAAATTTCCCATCCTACTCCAGGCATATAAAAG--CTGCAAGATAATATATTTTTAAGTATTTTAAACATATCAAGTCCAGCTCAAAAGCAAGAAAGTGTAATTTTCAGATTCTAAGAAAAG-GGAACCTATACCAGTGAGAGGCACCCCACACCCAGTGGGAAAACCAGGGGTAGAAATGGGCTCATAGGGCTA a score=8057 s mm7.chr15_random 3887686 570 + 7075849 TGAGGCTCCAGTGACTGGCCA-------GAGACCAGATGCAGGTCACATGTCC--CACTGCTGGCAGGAAGTCCACCTTGAGCTCTCA-TGTGAAGCTGGATATCACAGCAAAC--ACCGAAGAGGGTTTCTCAGCCATTGGCCTGGG--TGCCCGAGGAAGCGAAGGAAGTTCTCC--AGCCACGGGTAGACAGAG------------------GGAGCCTCGAGCCTGAAGCCCCCACTGGTGTGAAATCCAGAGAAAAGCTGGCTCTGAACTGT-----------GCTGAGGAAGCAG-----------TTCGGAGTC-----------------------------------AGCACTACA---CAAAACTGCAAATC----CAGGCGCCT----------------------TGGACTT------CAGAAGAATTCACACCTGAGGAGCTAGACATGATTCAGA----GGCTCTGGCTGGGCCTCGG-GGCTCAGGCGTCCCAGCTTTTGGAGGAAACAACCAGGGGAGCA-----AGG--AGGGGTGCA-GTGGAAGAGGGGGGTCTGTGAGCAC--AGAGGTACAAG--CTTGGCCCCTGCAG------AGGAGAATGTTGGTCAACAGGTGGTCATGAAACA-GGAAATGGTGACATTGCTTCCACAAGAGAATGTCACATAGCACTAGTGAGAGACTGTGTCACAGCATGC s bosTau2.chr5 31388301 710 - 76426644 tgagccatcagggaCTAGCCACCAGTCTCAGACTAGGTTCAGGCTCTAAGTCCTGCTCTGCTGGCAGGAAATCAAATCTGCACTCCCAGTTTGAAGCTGGGTGTCAGAACTGATTAAAGGAATAGAACATCTCCACTATCAGCCTGGGGTCACTGCAGGAGTTGA--GATGCTCTCCCAGGACATGGGCAAAATGAGAGATACATATACAAGATCAGAGCCTCAAACCTAAAATATGCACTGGTGTCAGACCCAGATCCAAGCTACCCACGCAGTATAGATATCCCAAGCTGAAGTAGTAACATCAAAATACTTTGGATGCCATGAGCTTGCAAGGCAATAACAAAACTTCCCTGTAGACTTACAGACCAAAAATGCAAATTGTGGAAAGAACCTTTCCACTATGAAAAATAGCTTATAGACTCAGCATACCAAAGAATTCACACCCAAAGAACTAGAAATAATACAGGCAATGACTCTGTCCCAGTCATGGTGACTCAGGGTTCCC--CATCCGGAGGATGAAACTAAACGAGCAGTAACAGGACAGGGTTACGTGTGGCA----GGTGCCTGTGAGTTCCAAGAGGTGCAAGCACCTAGCTGTGGCTGGGGACCGGGAGGACGCTGGCCTGCAGCTGGTCAGGAAAAACAGAAGTGACAACGATGTTAGCAAAGAAGTATG--ATCTAGCACTGGCATGCGATTGTATCACCATATGC a score=13076 s mm7.chr15_random 3889060 495 + 7075849 gtgtgtgtgtgtgtgtgt---------------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt---------TGAGCCCTCTAGGCCACCTGACCAGGTcccctcagtcccccccttcccacactcccacactcagcccccctcccccccccccgaccccTGCAGGATTATCCTGTCTGTGTTCCTGACTCAGCC--TGGG-AGCCACCT--------GGGCAGCAGGGGCCAAGGGTGTCCTAGAAGGGACCTGGAGTCCACGCTGGGCCAAGCCTGCCCTTTC-----TCCCTCTGTCTTCCGTCCCTGCTTGCGGTTCTGCTGAATGTGGTTATTT-CTCTGGCTCCTTTTACAGAGAATGCTGCTGCTAATTTTATGT-GGAGCTCTGAGGCAGTGTAATTGGAAGCCAGACACCCTGTCAGCAGTGGGCTCCCGTCCTGA-GCTGCCATGCTTCCTGCTCTCCTCCCGTCCCGGCTCCTCATTTCATGCAGCCAC-----------CTGTCCCAGGGAG----------AGAGGAGTCAC------------CCAGGCCCCTCA s bosTau2.chr5 31390524 540 - 76426644 gtgtgtatgtgtgcatgttgtgtgttctgttttgtgcatgtgtttatgtgtgtgtgtgtgtgtgtAGGGTAGGATAAACCCTCAGTTTTACCTTCCC-GGTTTCTCAAGATCTTCCTTTCCCA---TCCC-----CAGCGCCCTCCACCCCAAAAAGCCTCCTGGGGA-----------------CCTGACTCAGCCACTGGGCAGCTGCCTCTGCCTCGGGGCAGC--GGTCCAGGGTTGTCCAGGGAAGGGCTGAAGGCCTGCCGTGGGCCAGCTCTTCCCCTCCCCAACTCCTTCTCTCCCTTTCTTCTGCCCATAATTCTGCTGAATCTGGCTATTTTCTCTGGCTCCTCATACACAGAACACTGCTGCTAATTTTATGCCTAAGCTCTGATACAGTGTAATTTGAGGCCAGACACTCTGTCAGCAGT-GGCCCCGGTCCTGCTGCTGCTGTGATTCCTGTGTCCCTCAC--CCCCACCACTGGTCTCCCgctgctgctgctgctgctgctgctgTGGTGAGAGAATGAGGCAGAGGAATTGCCAGGAAGAGAAGCCAAACCCTTCA a score=3408 s mm7.chr15_random 3889736 155 + 7075849 CTGGCATGTTTCATTTACAGAAGAAAGTTCTCAACCCCTGACTT-CTGTCAGGCTTCTTC-CACATCTCCCCAATGCTAGCCGCTTAGTGACCAGGTTAGAGACTTGAAATTAGCAAGTCAGAGGGAGGAATGAATTGCTAGAGGGAGTTAAAGGTA s bosTau2.chr5 31391245 143 - 76426644 CTCACGTGTTTTATTCACAGAAACAAGTTTGCAGGCCCTCCCTTCCCACCAGGTTACTTTGAATGTACACCCAAAGCTAACAGC------------TCAGAGGTTTGAAGCCAAGAGGTCAGGAGGAAGAA--AACTGCAAGTGTCAGTAGGAAGCA a score=13092 s mm7.chr15_random 3890132 552 + 7075849 CACAAAACATCCAGCACTGTTCAAGCCCTCCTTGTGTGGGCATAGGAACCATG------AAAATGCAGACAGCCCCATTTAGGGGACAAGGCAGAGAGCTGTCAGCAGTCAGGGCTAGGAGCCCAAACAGCAGGACC-------------------------------------TGAGAGGACCCTGGGACCC--CTTGC--GACGCTGGCTGTT--CTGCCATCTGCAGCAGCTGCT-TCCTTGGGAACAGAAGGAAAATCCCTGATTAGAGAGAGCAAGAGTCCCGGGGTTCCCTCATGCACCAAGTTCTCCTGTCCTGACCCACATGTGTCTCCCTTCATAATTTATGAGGGGAGTTTCACTGGACGCCTCCCTGAGCCATAAATAGCCATCGCTGGCCGATCCCAGGCAG----AGCCGAGTACCCAGAGGCTGGGG--GGAGGC--TGAAAAGGCAAATCCCATGAAGGT---AAGGCCCCACCCTCCC----------------GGAGGCAGAGCTGGTGTGAGGTCACAAGCATCACATGCCCCGGCACTGCC----------------GCCTTCTTGGCCACGAGTTTGTGCATCCAGTTTCCTAAATTGAGATA---ATATTTGTCTCTCAGAAGTATG s bosTau2.chr5 31392227 624 - 76426644 CACAAAATGCACAGCAGTTTTCAAACCTTTCTCATTCAAGTGCTGCAGGTCTGCAAGATAAAATGAAGAAACCCACCTCTGAGT------------AGCTGTTTA---TCAGGGCTAAGAGCTCCAGTGGCAGAAACAAGAGCATGATGATGATCAGGGGCTGGGGCAAGACTGGGAGATGGCCCTGGAGCTCATCTTACAGGAAGTCAGCAAGTGTCCACCGCCTGGAATAATGACTCTCCTAAGGAAGAGAAGGAAAATCCCAGATTAGACTGAGCAAGGTTCCTGGGGATCCCTTACGTACTGAATTCCCCAATCCTGACCCACATGTGTCTCTCTTTGTAATTTATGAGGGGAACCTCACTGACCTCCTCCCTGAGCCATAAATAGCCAC--CTGGCAGGCCCCAGGAAGCAGCATTTGAAGACAAGGAAGGTGTGGATGGAGCCAACTAGACAGCAAGCTCCCGGAAGGCAGAAGGGCCCTGCCCTCCTCTGTGATGTCTCAGCATGCAgcagagctg------ggtctggaac-ttaggtgccctggctctgacacacctgagttatgtaacctctctgaccatcagtttccttgttcatttttctaaatggagatgattatacctgcttcataggattatt a score=6411 s mm7.chr15_random 3890989 329 + 7075849 TGTGTTGATGAAGGAAATGAAAGCTTAGTCCAATATCAGGTACATAATAGGTGGAGA---------GGGAATTATAGATGTTAACATTATTCATGATAATTTCCTTAGTATGACTTGACCCCTCCTTTCTCTCTCTCCCCA-GCACATCTGCCTCCCATTTGCCTTGCTCCTGTCTATGATACAATTTATCATATTGAAATCC-CCTCACCTCCATATTTAGTCTCGTCTAGAACAGCTCCCCATTTGTTG---CATTTTTATGTC---------------------AATGAACACCAGGGGGCACTATGACTCTAGTCGGGCTTCCTTTCTGCGGCGCCACCTAGAGGAGGACTTAAGCATCA s bosTau2.chr5 31392965 324 - 76426644 taagttggtg-----aatgccaactcagtataatgcctggcatatggaagatggacagtaattgatggacatcactGATGTTAA---TGTTGATGATAATTTCCTTGATATGGCTTGGTCCCTTCTTGGTCTCTCTCCCCCTGCACAGTTCACTCTCCTCTGACT---------------TAAAACTTATTACATCAAATTCTATTTTCCCCCCATATATGTCATCCACTGTCACTGCACTTGAGTTGTGGAAACCGCTCTGTGCCTAATCAAAATCATTGATGGAAATTGACCACCAGGGGACGCTGCGAC-------------CTACTCTGCAGCGCCACCTGGAGGAGG----AAACATCA a score=9230 s mm7.chr15_random 3891475 572 + 7075849 GGGCCAGCTTGAAATGGGGCGGCTTTGATTACTCTTCCTTCACCCCCACACTGAGGTTCATAGATAGGGTGGATCAGGGTCTCTTGCCTGCTCTGGagatgtgaagactgaggcgctacgaggttaggaggctaaaata---------actcagtgagtggcggagagaggtgtagagctccactctggctgactccagaactcatgctgttgttaactgtgccatatgccATtcaatcaatcaatcaatcaatcaatcaTCCGCGACACAAGCGTTCATATGCTCCACTCTGAAGCAGGTA-ACAGTAGACGAAGACAAACTCAGTACA----TTGCTGTCAAGCCTCTCAGAACGCTGTTAAGGTACACTAATGAAC-CCTGTGTACAGCACGCCTGGACAGATGCATGCACACATTCACATATGCTTAGTTATGCATACAAACATGCCCCCTCATACAGCCATACACACCCATGCACTGGAGCTATTGTCTTACACACACATG-----CCACACACAGTCTTTGCTAT---------------AATGAAGGAGAGACTGGGAAACCCACCTTTAGTATCTAGTTTCTCTGATT-----TCCAGTGCAGT s bosTau2.chr5 31393588 570 - 76426644 agtccagcccaatacatgttggctctgattactgttacttaatcctcattccaacccctata------atatgtca---ttttccccctgctcttgagataaggaaaccaaggctctatgggattaggagactgaaccaaagttacttactggatgagtgatgaagtaagattttgaccttaaatctggctgatttca-aacccacactgtcaataaatgtgc----------tggactgGCTAAT---TCattcatatattcgcttctcaagcattga---gcatctcttctgtacaggtagaaaggatacggagatgaatctggcacagtagttgccttcatggaactcataccactgctgaagtacacatgtatgcaTCTGTGcata-cac------acaagcacacacatgcatccatatgcacc------tgcacacaagtgagcatacacagataggtgcacccacgcacgca-tggagacat--gcccacacacgcatgcatgcccacatatacactcaGGGATTCAGAGCAAAGCACAGGTTGGGGAGAAATCAGGAGATACATGTTAAGAATCCAGTTTCCCTGATTCTATACCCAATGCTGT a score=3361 s mm7.chr15_random 3892393 68 + 7075849 AAAGGGCACTTAGCTAGACCCTCATATAACTGAGGGCTTCATAAATATTTGAGG-AGAGAATGGAGAAA s bosTau2.chr5 31396525 69 - 76426644 aaaaaacaCCCAGCTGGAGCCTGATCTAATCAAGGGTTCAATAAATATTTGAGGAAGAAAATGGGGGAA a score=7809 s mm7.chr15_random 3900799 331 + 7075849 GTCCCCATTCTGAGGCCTAGGGGTCCTTCCTGGGAGCGGGAGATCTT-TAGGCAAAAGTG-TGGGGCCAGATGGATGTTCACGGCCATGTGGCATGTGGTAAGGGAAGGTTTCCAAGCCCTGTGGACAAACTCAGGTTGGGGGTGGGGGGCAGGAAACGGGTCACCCATTTTTTTCTGAACCTGTACAGGTTTCAAAATAAAAGCCTCCAAAAAGTAATGTTTTCTAGGTGGAGGAGACCTGCAGAGGGGCA-GAGTGGGGCACAGGGAAGTGGAGAGAAAAGAGGCTGAGGCCTGAGATGAGAGGGACTTTCGGGAGAGGAAGGTAAGGTTGT s bosTau2.chr5 31405584 297 - 76426644 GCCCCCATCCTG-------GGTGTGTGACCTCAGGGCTGAGGAACTTGTAGTCTAAAGAAACCAGGCCAGATGGGTGTCCACAG-----TGCCATGTGGTGAGGAAGGATTTCCAAACCCTGTGGCCAAACTCTG---------GGGAAGAAAAAAATGGGTCACC---------CTAGTGCCATAAAGTCTTCAAAATAAAAGTCTTCAGACGGTAAGGGGTTGGAGGTG-------TCCACAGAGCAACAGGACTGGGGACCTGGGGAGAAGGGAGGGAGCAGGTGCCGGGTGGGCGGGGGAGGAGCTTTCCAGAGAAGCAGGCACAGCTGT a score=21579 s mm7.chr15_random 3902731 545 + 7075849 CTTTTTTTTTTCCCCTATGCAGAGCTTTCTCATCTTCTCACAGTAGC--TGGTCCACCTATTTATTTCTGGTTTCTAGACAGCCTGGTGGCTGAGGAG-------GCTCCTCGTCAGCAGGTTGGAGCCGGGTACTCTCTCAGCCACTGGCT--TTGCCCCCAGTGCCGAGCCTCCCCCATGC--------TGCCCCTCGGAAGACTCAGCAAACCTGGTCCTT-GGCCTGCTCCACCCAACTGAGAGGGACACTACCTCGCCTTTCACGGCCAAACCCGGGACGCTGAGGCTTTGCCTCTCCCTGGACACCCAGGTCCTTTTAAGGAGTTATGCATCTTATACGTTTCTTAATCCCCCGACTAAATTTACCAGCTGTCCCTTGCAGCCAAGACATTGGCTAAATTAAACTCCACAGTAGTGAACACGGTGTATCAGATGCGGCTCTGTGAGCCCTGGTGGGGGCAGCCACACCCGACCTGTCCTGAGGCCTGGAGGTCAAAGCGC---------CTAAGGGGGCCTCTCTTTCCTCCAAGGCACTGCTGTCCAACTAGCTACCATGTCACCAT s bosTau2.chr5 31411802 542 - 76426644 CTTTTTTTTTTT-------------TTTTGCATCTTCCTCCAGTCACATTTGCCCATCCATTGATTTATGGTTTCTGGGCTGCCTGGTGGCTTTAGAGCTCTCTGTCTCCTTGTCAGCAGGTTGT-TCTGGGT---TGCTCAGTGACTGGGTGACTGCCCTCA--------CCATCCCCACGCAGAAACGTTGCCCCTGAAAAGACCCAGCAAACATGGCCCCTCGGCCTGCCCTGCTC---TGGAAGGCTTCCCACCTCCACTTTGACAGCCAACTTCGAGATGCGTCGGCTTTGCTTCTCCCCTGACATACAGCACCTTTTAAGGAGCTATGCATCTTATACGTTCCTTAATCCTCCAACTAAATTTACCAGCTCTTGCTTGCAGCCAAGGCATCAGCTAAATTAAACTTTGGAGTGGTGAACACAGTGTATCAGATGCACCCCAGTGCGGAGTGGTGGGAGTAGCCACTCCCTGTCTGTCCTGAGGGCTGGGGGTCAAAGCCCTGCTTTTCTCTCCAGGCATCTCCCTCCACTCAGAAACACCATTGT----CTCGCAGCCAGGACACCGT a score=5923 s mm7.chr15_random 3905282 283 + 7075849 GGCCTTGCCTGCTGTGGACACAGTGTCACATTGTGGGCAGT--------TTCAGCCTATG-----TCCTTCTCATCTAAAGGGAAGAAGCCCCTTTGTCAC-----ATCTAAACACAGTAAGCTCCTTGCAGCAGCAGCATCCTGTGACCCTGTGTCCCAGTCCTAGGCCACAATAGGATGGTATGGCTTTTAAGGACCAG------------------------CCCACGCAGATACCACACACCAGATCTGGCTCTCCACAGC----AGGGCTCCAGAGTGGAGCT-GCCCACTCTCCCAGAACTGAGCCAAGCATGTGCTCCATGTC s bosTau2.chr5 31415021 317 - 76426644 GGCCCTTACTGCTCTGGGCA--GTGACACA-----GGCAGTGAGGTCCTCCTGGCCAAAGGAGCATCCATCTTCCCTGGAGGGAGGAGGCCCCTCCATCGCTGGAGACTCAGGCCCAGCAAGGTTTGTGCATGGGC--CCAGCTGTGACCCTGTATCCCAGTGCCAGGCACCAGCTGCTCCACCTGGCCTCTGAGGACGGGGCTGGAGTGAAAGGGGACAACTGTCCTGTGCAGACACCGCAGACTGGGTCGG----TCCTCGGTGTTGAAGGCTCCAGAGTTGAATTGGCCCATGCACTCAGAGCTGAGTCAAATGTGTGCCCTGTGCC a score=5893 s mm7.chr15_random 3905810 402 + 7075849 CTGCAGAAACCATTCTTTAAGCCCAAAAGCA--CTTCCAGAGAGAGCAGAGCATCCC-----CAGGCTGCTGGCTCAGCAAGTTCACTGTGCTCAATCTCAGGAAGTGAGGATAAGAGCAGTGCCTGGAGAGTGCCT-GGTGCTGAGCTGAGGGTT-----------------TCTGAACACATTAAAGCGGGGAGCATGGACCGGGCCTCAGGAGGGGTGTTGAACATCCCTAGGCAGAGGAGTCTAGCTTCCTGGGAAAAGAT--ATCAGGT-TAAGCACACACATGTCCTC-TGGAATAAGATAATCTTTCTGATCACACACTATACACACACAAAAGCCTGCTCAAAGAAAACACTTGAAAACTATAGATCGGTCACAGGAGAGGAGCCCAGTGGCTGGCA----GCAGCTTTGA---TAACAAAGAGGGGAAA s bosTau2.chr5 31416116 400 - 76426644 CTGCATAAATC-TTCCTCCAGACCAAAATTAGCTTTGCAAAGAGAAGAGAGTTTCCCTCTCTCCACCGTTTTCCACTGCAAGTTAATTCTTCTTGAGTTCCTGGGATGACGGCAAATGCAGAG----AAAAGCTCTTAGGAGCTGAAATGATGGCTCAGCATTGTCAGGTCCTTTTGAATGCAATCAAAGGAAGAAGCTGGA---------------AGT-TAAAACATCCTTTGACAGAGGAGCCCATCATGTCAGGGGGGTATGCAGCAAGTCTGAGCAGATTAATTTCCTCCTGGCATAAAATATTCCTTCTGATCATAAA-------------GCAACTTGTTCAGAAGTAACTCTGGCAAGCTACAGAACTGTTACAGGAGAGGTGC----TGGCTGACAAATCACAACTTTGATGGTGACAAAAAAGAGAAA a score=5014 s mm7.chr15_random 3906627 156 + 7075849 aGTGAGCATCCCAGGATTCAGCTGTGTCCTTTCCTGTTGTTCCT------TGAAAGCTCACTTCCCCACTTACC-------------CCAATTACCCT-CCACAGTGCAGTCTGAACTAGGCTTG---TTGACC-AGATGGGCAGACACCCAGAGGAA---CCAGGGAAGaaagaaaagaaaa s bosTau2.chr5 31416517 183 - 76426644 AGTGAACACCCCTGGATTCAACTTTGTCCTTTCCTGTCATCCTTCAAACGTGAGATCTTCAACCCCTACCCTCCGCTCCACCAGAGACCATTAACTCTGTCATACCGTAGTGTGAATTAGACTTGCCTCTGACCAAGAAGGGCAGACAGCCAGATAAAACCCTAGGGAGGAAAGAGGGCAAAA a score=8300 s mm7.chr15_random 3908528 519 + 7075849 ATCCAGAAGAGCAGTAAAACTGAACACCCAAGCTCTCCT---GTCCCCTTGGAGAGAATCCCAAAGTCCGGGAAGCTGCCTTAT-CATTTCTTTTCCCATGATGCATTGC--ATGTTTATTTGGCC--TTGATGCTAGATCCATCAG-CATCTA------TATAATGACAGAGAGCTACTTCCACCTGTGCGTGAGCTAAAGAGGCAGGACGGGAGCTGCCCAGTGTTCCCACAC-CCCAAGTGAGAGTCTACATGCAAGAGTTTCTGC--AAGCGTCGTACAGTGCACCCATCAGGTTTCAT-GGCCATTGTTCACGAGTTGTTCAAAAAGCTGGAA---GAGAAGACTGGCTGGAAGAGCCA---GGCTTGGTTTTT-CTATACTTGGCT----------CTGGAGCACCTA-GTTGATCTAGCAAA----CAAGAGTG-----TCAAATGCAGGTTTGATAAGTGACCCTTGGCTTCTCCTTCTCTGTAATGTATGAAAAAAGATAAAG-GGAAGAAACGGGGAACTTGGAAGTTGAAGGTAGTTCCTTAGAAGGGtgttttg s bosTau2.chr5 31416856 565 - 76426644 ATTTAGAAAAACAGCAGAACAGCCTATGAGAGGCCTCTTTTTGCCCCTTTGGAGAGAAGGCTGCAATTAAAGAATCTTATTTACGTGTTGCTTTTTCCACGGTGCATTTCTCAAGTTTATTTGGCCATTGAATGCTCTATTTGTCAAACATCTGAAACAGTATGCTGAAATTGAAGGATTGTCATCTGATTTTTAGCTCAGGGGCCAACGTAAGAGCTGCCAACTATTCCCACATACCAAAGAGAGATTCTAgattggagattttctcttaaggagccagatactaaatactttaggctttgtgggccataACTTACGAGCCATTAAACAAACTATAACTCAGTAAAACTGGAGAGGGGAGGTGGTTGGCTGGATTTGGACTATGGTTTGCCCAGCCCTTTACTAGATCCCTTATGCTGGTCTTGCAAAAATTAAAAAGTGAAAAAAAAAAAAAAAAACAGTTGTGTGACTCTTGGCCTCTCATCCACTGGGAGCTAC-AAGAGGGTTAAAGTTGGAGAGGCAGAGAAGCTGAAGGTTGAAAACTTTTCTTTAGTGGGATGTGTTG a score=5490 s mm7.chr15_random 3918549 290 + 7075849 TCTCCTCCATAGCTCCAGCCCACACAAAGCATGGACTAAACCCTCCCCCAACTC-CTCTGAGTACTTTTGAGACAAGTG-GCCTTTCAGGAAGAGGTCACAGAACCCTGGTGGCCAAAAGACACGGTCACCTTGCTGTTCTTGGCCCTTAGCTCATCTCT-CTGGCCCAAACTTTGGCTCCTTCCAA-ACCCTGGTGACTCTGAGACCCA---CCCAGCCCTGTCTACGACTCCCATTCTCTGGGTTTCCCTTCTTGT------GCGGGTCCTCACTTCCCAG---AAGGCATGGGGTTTGTTTGC s bosTau2.chr5 31439059 296 - 76426644 TCCCCTTTGTAACTCCAGCCT--------CACAGACTGAACTCTTCCCTGGTTTTCTCTGAGCATCACTGAGATAGGTGAGCTTTTCAAGGAAGGGATTCA-AACTCAGGTGGCCAAGAGCTATAATCACCTCAGCTTACACAGCCCCAACCTCGGCTTTATTTGCCAGAGTCCCAGCCCCAGCTAGGACCACCTTGGGTCTGAGACCCCATTTTCAGCCCC-TGTACCTTTCACATCCTCTAGTTCTTCCTTCTTCCTTATCAGCAACTCCTGATTTCCCCAGCAAGGACATTGGGTCCAAAAGC a score=20511 s mm7.chr15_random 3919037 620 + 7075849 gtcctATGT-TAGAAGTTTATGACCTCTAAATGCCTTTCTCC---TCTAACTCACTGCCTctcacagcttccctaaccagctccattctatatatgaaaacactgaggccaagagaggcctactgactggctcaaggtcactcag--------ggacaGCATCA---------------------TATCTGGGCTCTCTTCTTACCTCCTGGGCTTT--------GGACCTCT---------------------------------GTGAGGAAGGGGAAGGGGGAGGGAGACATCATCTTAGGATCTGCCTGCTGGGAATGGGGCAGAGATTGCTT-GAGTTAATGTACGTCACCCCACACGACTAACCTCATAAATATCACTGGATCT-GCAGA-TCCACCTG--CGGCCAGCGTCCTGGACCGCAGCAGCTCTGTATCCTGTTGCCTGCCACAGCAGGTGGAAATAGCGTGAACTAAGGAAATCTCACCAGCGGAGATAACAGCTGAATGCTTGTCTCCTGGCAGACAGTGGCTAAGAGAATGCTGACCCACACACACATCGGTCCCTGCCCCCCTCcaggggctggaagg-cagagtgggcttt------------ggacataagtgcacat-gactgaccag----------------gctgtgtgagcctggacaaatgacttggcttctctgaatctcagttgtgttcatctgtgaaaagag s bosTau2.chr5 31439494 713 - 76426644 GTCATTTGTGTAGGATTTTGTATCCTCCAGATCCCTTACGCAGGGTCTCATTCAGTATTCATCACAGCTTCC-TCTTCAGctccattttacagatgaggaaactgaggcccagagaggcagagcgaccagctcaaggtcacacagcaagtaagtggcagagccagggtagggacccagggctgtctacctgcatgctcttaacactCTTAGGACTTTCTACCCGTTGACCTCTCTCTCTCAGGGGTGAAACTGCACTTAAATACAAGTTGGGGACCAGAGGGGAAACAAGGCCACAGGCTCAAGAC----------GGAATGAGGCTGACATTCCTTTGAGTTAATACACATCACTTCACAGGGCTGACCTCATAAATATCATTAGATCCCGCAGCCTCCACCCAGCCCGACAGGCCCCTGGATGTGAGGAACTCTGTATCCTGTTCCCCACCACAGCAGGTGGAAATAGTGTGAACTAATGAAATATCACCACTGAAGCTGACAGCTGAATGCTTGTCTCCTGGCAGACGGCAGCTAGCAGACTGCTGACCCACACACAC--TGG--CCTCCTTCTCTTCACCAGCTGGGAGGCCAGagcgggctttgggaacagcacaggacaggagtggaggcagacagaccagactctggtccctgcctgctgtgtgaccttgggcaagggacttgacctctctgaacttaagct-tttccatctgtaaaaggag a score=8258 s mm7.chr15_random 3919899 831 + 7075849 gaacctgaat---tcaggtcccctgcacccacataaaaatctggtggcctcaggag---agaagctggggtaggcagat--------------tgcagg-agagctgctctgactgagtcagcaaggcaatgaccctcgtgttcagtgtctcaaaagatgtggagagcaattgaggaagacagctgacattaacATGTGCACGAAacacactacacacacacacacacacacacacacacacacacacacacacacacacTGAAGCCAGAAGACAGCTCCGCTGCACGTGGTTTCTGCCTTTA---GGATGCCT-----GCTGGGGGTAG-------------------GGGATTAGGGTGG----GGGAGTTTCAAGTCCAGAAAAGCCACTTTGTGTCTCAGAGAGAAT-ATTCTCAAG--------AAGTGTGATGTCCTCAAACACAATGGCTACTCAAGG----GACCTCCCTCAT----------CCTGCACAGCTGTCCACTCCAGGACCCTCCTTGGTGATGCTTCCTGGCCTCCAAATGCCAGGACTCCATATGCATCTACCC-GGAGCCAGTCTCTCTCCATGTG-AGTCTCACAGTGCTGACACATCTCTAAGCTTGCAGTGTCCCTTGAGGCCCAGGCCCAGGCCTCCCCTGCTCTGCACAGTGAT--------------GGGAGAACCGAGCCCAGCTCCTCTCAGCCAGTGAAACCTAACCCCAGCCTTCCCCATCAGACCAACCCTACCCAGTGCAGCACCCACTTCCTCTTTCCAACAGGACTTGGACAGGAGAGTTTCTAGTGCAGCAGGGGACTGCCCTTTTGTAACCCTCCAGGGAT-GCAAGCCTGAGAAGGCAGCCAGTATGACACCAGGTGTGGTTGGGGAATACAGAGGAAGAACATCCT s bosTau2.chr5 31440367 838 - 76426644 aaacccgaatttctcatatctcctgcactggcaggaaggttctttagcttgggaagcccAAAAG-GAGGGTAATGGGATCCATTTCAGTAATGTGTAAGTGGAAGTGTTCAG-CTGAA--GGCCAGGCA--------------CAGTTTC---AGAGATGAAGGGAT-------GGAAG--AGGTGAGGTCAATGTGGGAATGTGACA---TCCATATGT-CCTACTCATCTAC---CTCATTACTGTTGAAAGAAACCCTAAAGCGAGGAGAAAATGCCATTGGGCTCTGCTGCTACCTTTAAGCAGAGGCCCAAGGGGATGGGAGTAGCTGCTTGTTAGGCCTCACAAGGGTCAAGATGGAGATGGAGATCTCAAGTTCAGAAAGGCTGCTTTAGGCTCCAGAGTGAATCATTCTGGAGAAGTTCAAAAGTATACTGTCATCAAACTCACCAAGGACTTGGGGCATAAACCTCCCGAGTGCCTGGCACACTTGGGCATCCTCCCACTCCGAGACTCATGCAGCGAATGGTTCATGGCTTTGA----------------------CCACCCAGAAGCCCCACCTCCTCCACGTGCAGTTCCCTTGGG------------TAGTCTTGAAG-GTGCCTTGCAGTCCAGGCCTCTGCAAcctctgccactgatagtgacctgtttaagggtcgtgggcaaccaggccaagctaatcgcagtcgatgaaactcagtcctgggaatactgatcaagat-------tttagggcagta--gactcccttttctccatagggcttggtcctgaaggtttacagtgctgcagggaaagaccatcttgtaaccttcaagggacagtcagtctgagcaggtatccagtgcaatacaaggtatttctgagaaat----agaaacagcattct a score=25137 s mm7.chr15_random 3923599 1346 + 7075849 CACCGAGGCCCCAG--CCAGGTTTCCC--------CACTGTGGGCCCCCGCCCAGTCTTTTCAGCCTGCTG-TGGGGAATGGGG----AGTGGGGCTTCCTTACCTCCGATCTCCCATGGGACTCTGGAACTCGGAAGCCACTGCCAGAA--TGGGACTCCATAGCTGACCACGTCAGCGCCC--GGAAGTTTGATTCGGGGTAGGGGTGAGGAGAGGAGCCTTTCATGGTGTG-ATCTCAGACACT--GTACCTTTCTTGTGAAACTCATCCATTCATTCCCATGTCTCCAAATTCAGACCTTGCACAG-CATCTGTAACCTGACCCTTGGAAACCAGGAAA-------GTGATTCACACG-----------CCTTTCTCCCTCCAAAGCACCCTTACCAGTGACATTTGGCATACATCATCAAGGGT--------------GCCTATCTCCCTCAAGTTCAAGCTTACCCCTTATAGCAGG-GCTACACAGCTGGGAAACTGAGACAC----TGAAGACGAGGCTTGTCCAAAGGTGGGCTACACCTCTCCTCCCGCCAGACACTGACATATTGCCTGGAAGCTCCAG-CCTGGTCCTGGCTGCAGTGCCAAAGCTGTGTGC-------TGCAGACCCATTGCACTGCC----------ACCACTGCCA---CAGGAGGTACCC---------CCACAATGCCTCAGGGTG---------------------TCTCTTCACCCCTA----------GCAACCCTTGTTTCCATCTTTCCCTC----------TTCCTTTCCTTGC--AAGCTTGGAACCGAG---TGTGGCTGCCACCCAAGGTGATCATGGAAGGCTTCATGCAAGAGGTGTGCCCTGCTTGGACCTTAGTGCTGGGTGCTGTAGGGAGGTAGAGGCCAAGGGTTATTAATAGGCCTGGCTCAATAGGCCTGGATGGGGGTGAATGTGATACAGACACTCAGCACCGTGGCTGGGGAGTACCTGACACCGGAAGGGGAGGGGGCCAGGGGCTG-GGGGAGCGCCACCTCCCAAAATAGCCAGGGCTGTAGACTATTTAAGTGGCTGTCCCACCACGAGTCTCATTTCCCAACAGGATCTCCCACCAGCCCAGCTTTTCTGTATAGGCTCCGGCCT----CTGCTCATCCAAGGTAAGCGGTAGCCTCTGAGGTTG---GAGGATGGAGAAGGTGGAATCAGGCCAATTGAAAAGGACAGCCAGGCTGCCATTTCTCT---AGAATCAAAATGGAGGTTG--------------------------TGGAGTACGGG------------ATCCCTGAG--TTCTCTCCGAGCTTCTTGGGTAGCCTGA-ATAAATACTTGCCCCCAAGGATGGACCTCAGCTGTCCCT-CAGATGGAGCTGAGAGGTAGAGCCATATGTCTGTGG----AGGTCTATTGGTTCTATCAGGGGAGCAGAAGGCAGAGGGTGAGAGGCAAGCACTTGGGTGAGGAGTTGATTGGCTAAGCCAACAACAT s bosTau2.chr5 31458363 1485 - 76426644 CATTCAGGCTCCAGAACCAGCTTCCCCATCCAGTTCACCCTCTGCTCCTTCC--ATCCATGGAGTCAACTGATGGTCAATGAAGGACCAGTACAGCTTCCCTCCAATCTACCTCGCATGGAGACTGGGCCTCCTAACACCACCATCAGGAACTGGAACGTCCT-GTTGACAATGTCAGCATCCTGGAAATTCTTTTTAAGGCTGGGGATGAGAAAAGGAAGCTTTCATGGTGTTCATACTAGACACTCAGTAAATATGTGTTA---------CATTCATTCATGCTTTTCAAAGCACACCCCTTGGATGGTCATCTCCAATCCAAGACAGACCACCCCAGAGATGTCTTAGTGAATCTCCTGAAAGCTGTGGGCCCTTGCTTCACAAAAGAGCACTTGCATGTGATTTTGGGAATACAATTTCAGGGGGTTCTTCATCCCCTGGCCCATCTCT---AGAGCCAAGTTTGCCtctaattgaactcattttacagacag-agactgagatgcaaagtgaggaaggaatttgtcagagaacatgcagAGCATGTGTTTCTAGGAGGCACTAGGTCATCTTATGAAAATGCTGGGTCCACTCCCTGCTCCAGT-CCACAGCTTTGAGTAGTCAATCGCAGAACCCCTAGCCTGTCTGTTTGCCTCACTCATGCAAGAGCAAGAGGGAGACAGGCCTGTACTGCAAGGCTGGAGGGAGAAGACTGAGTAAAAATAGGAATCTAACCAGCCCCATGCATGGAAGACAGTTCCTATTCCATCCCTCTGCTCGAGTGCTGCCTTCCTTTCCTTGTGGAATTTTGGAGCCTGGCGATGTTACTGGCATCTAGAGTGTTCATGGAAGACTTCATGGAAGAGGAGAGCCCTGCTTGAGCCTCAGTTTTGGGTGCTGGAGGGAGGCAGGGACTAGGGGTTATTAATAGGCCTGGCTCGAGGGGCCCAGG-GAGGGTGAATGTGATACAGACACCCAGCACCGTGGTTGGGAAGTACCTGACACCGGAAGGGGAGGGGGCTGGGAACAGAGGGGAGCGCCACCTCCCAAAATAGCCAGAGCGGAAGCCTATATAGGTGGCCATCCTCCCCC-AGGCTCACTTCCTGACGGGATCTCCCACCAG-CCAACCTTTCGGTCCAGGTTCCAGCCCTCCACCCCACACCTGAGGTGAGTGGCAGCCACCGGGGCTGGACGAGGATGGAGGGGAGGAGACGCG------------GGACGGCCAAATGTCCCCTTCCCTGCCAGAGACACAGGCTAGGCTGGTGACACAGGCTGAGGCAGACAGCCATGAAGTTCAGGGTTGAGAGTACAATTCCTGGGGTTTCCATCCTAACTCGTGGTGTGACCTGAGGCAAATTCCTCCCACTGG--------CTAAGCCCACCTTACAGAACAAGATG---GGTGGAGTCAGACATCTATGGACTCAGGTGAGGTGGCCCTTGCCTGG--GCAGAGGACACAGGAGAAAGGGATA---------TGGAGGGCTGATGGGCTGACCTAAAGACAT a score=11295 s mm7.chr15_random 3925365 263 + 7075849 GAGCTAAAGCAGCTGAAGGGTGCAGGACAGCTGGGGGGTCTGAAGTGGGCCTCATGCCCAGAGCTATGAAGTCAGGGGCTGTAGCCTAGGAGCCTTGGAAGCCAGCTGGCAAGCTGTGGCCCAAAGACGCTGACTCACCAGGAGGGGG--CAGCTGGAGCCAG--GCACTCCTAAGGTTTCCAGGAAGGGCAGCCTTCCAGGGCTCAGCTAGGGGAGACAGTGTTGACAGCAAGTTGTCAGGCAACTTGAGCTACTGGGCAGCTGGG s bosTau2.chr5 31460018 256 - 76426644 GAGCAGAAGCAACAG---------GGGCAGCTGAGGGGTCCACGGATGGCTTCACACGGTGAGAGATCAGGACAGGAGCTGCAGCATCAGTGCCTTGGAGACCAGCTGGCGGGCTGTCCCCTGAAGGAGCTGACTCACAGAGAAGGGGGCCCACTGGAGCCAGCAGCA-TCCTAAGGTTCCCAGGAAGGGCAGCCGTCCAACACCAAGCTGAAGGAGATAGTGTCAACAGTGAGT-GCCAGGGAACCTGAGCTACAGGGTAGCCGGg a score=36812 s mm7.chr15_random 3925666 1995 + 7075849 ACGCTGCCCACCTGCC-----------TCAGG----------TCCCACACAGTGATCCTCCCATCT----TTAACACA----------ACACATGACCAGAGAGA---AAGGTTATAGCTCAAGGTCATGGGGGGATTCAGCGTGACTC--------ACATTCAGAACTCTATG-TGTATGTCTAGTGCTCATATACACTTCGAAGGCTGCTAGCCACAGTCTGAAACTTTGGGAGACCTGAGGGAAGATGGCAGCCTTGTACTCTGGTCCCGTGA-GATGAAA-AATGTCCTGTTTCCCAGAGGTGATACTCTGATCACAAAACATGGTAATCAAAAAGTATGGTCTGATGGTACTATCCCTTATCCCCCAAATATGACCAACTTGAAAG-GTAGATAGCTATGCTGTGGGGCCTCTCTCACCTTAGCCTCCCTAATGGGAATTA---------GATGAAACACAACTCAGCTGTG--TCTGGCCCTGGAGAC-TAGAAAGTGTGAGAAAAAGAGTCTTCTGGCAGATAAACTGGTGCCCAAAAGGGTCTTCTGACAGAT-AAACTGGTGCCTTCTTCCTCGCAGAAACCAAATCAAGTTTCAGAATG---------TGGTCAGGTGAGGGAGGGATGGAGCCCAGACAGAGAGCCTCTGCACAGAGGAGCTCTGA--TAGTCCAACAACCTCCTCCCTGGGTCCTGTGGCTCAGGTTTCAAGTTCTTAACATTCAGATTTTTCGCGGCATAAATTTGCATCCAGGACAGAAGACAAGAGGGTACTGGAGGCGTGGAGAGACA--GAGTGCATAGCCCAGGGGCCACATCGGGGTGGAGGC-TGGTCAGCATCATTTT-------TTCCCCACGCGAGAGGACATTGTCCGAGATGCCCAGATCGGAGCCTCTCTGCC----------------TCCCGTATGCCCTTGACAGCGGCAGAACGCTCCAGTCTCTGC-----TGGTGGCCCTTTAGAT-CAGGAGATGGCCCCTGGCGGCGGGGTCCTGGGCGAGCCTCCTGAATGCCC--GGACCCC------------------------ATGGGCATGTG-------------GCCCGCTCAGC-----TTGGCGGTGCGGCGGGACTGAGCTGCTG-AGCTGTGCGCTGAGCCGGGCGCCCCCTGGCGCGGAGCCAGGCCGAGCGGGCGTGCGCCTGGCGCGCGACACTGCAGCGCTGGTCATATGAGCAGAAAGGATGAGGAGAACACTTTTTAATCTTTTCGCACTTGCTCTGCCCGCTCAAACAGTTGCAGGATGTCGATGACAGACGTGCTCAGCGCTGAGGACATCAAGAAGGCGATAGGAGCCTTTGCTGGTGAGCAATGCACCCCCACCCCACTCCCCGCGCCTGGCCCTGTCCCCTTGCCCTCTTCCC--GCTTCTGGGGCACCCCTCATCCCTCTGCGA---AGCCTCCCCA--GTTTCTTCCCTCACGCAT---CGGGTCTCCATCCTAG---GGGGTTAGCTCCTTGGTCCTAT----------GCTTTCCAAGAGCT-GCACGGACTGTGCTC--------------CCTGACTGAGTCTCACAAAGTTGAGGGCTCAGAAGAGTGG----CCTCTCCGGGAGAACTTGTGGGGGGGTCCAGGACCAAGTGCGAAGACCAGGGAGGAAGAAGCAAGGACCCAGACATCCT---------------CCTCTGAGAAGTGTAGAAGGGTCTGCAAGCCTGGGC---TTTCTCTTCAAGAGACCCCTTTCC-------------TTGGCCC--CCATTCCCAACAAGACTTTTCCTGGAAGGT--AGCCCATT------AGTGGAGATCCCCTCCCA------GGACAGACATAAGGGCACAGTGACCTTTCTGCATCAGGCACCCAGCCCTGCCCAGC-CCGC-TGCAGCTCCCCATCTGTACCCCCAGCATCTAATCCTTTTAGGTAGTCCAAGAGAGGGGTACCCACTCGGCTGTGTGATCTCTTTCCTCTAGCTTAGAT--------------------GTTCTTCCT-----CTGTCACCCAGGGAGGGAAACTGAGGCTGGGATAAGATT--CAAGCTGTACAAGGTCACCCAGTCCAGCACAGGAAGAATGAGATCTGAGGTGGCCTCAG------GTCTCAGTGCCCCACC--TTGGTGTGTAAAA-AGACAAAGCAACTTTTTTTCCCTCCAACTCTGGGCTGAGGGGAGACCATAGTTCT s bosTau2.chr5 31460611 2162 - 76426644 GCCCCGCCCACCTGCCCACACCTGAAGTCAGAGTGTTGAGAATCCACCACAAAGGACCACCCACATACCATCAACAAAGTGGAGggagactgaggcccagggatggcgaaggtcacaacccaaggtgacataaggacttactgcaaccccagatcttgaacccaggactcttgactccttgtccagtgctc-tGCACACTTTGGAGACAGCTGGTTGCAGCCTGAACCCTCGGGGAACCCTGGGAAAGACAGCAACC--AGTCTCTGGCTGCATAAAGATCAGGTAGTGTCATGTTTCCCAGAGATGAAGTTGGGGCCATAAAACCTG-TGTCTCGGAAGTGTGGTCTGAGGGTGGCACCAGCT---CCCCAAGCGTGAGC--CTTGAAAGTGCAGAGGGCAA------GTACCTTCTGCCACCCTCCCCTCCCCCATACGGTTTATAGGGGCAGGAGGAGTCCAGACCCGCATGATACTTTGGCTCAGGAGACCTGGAAAG------------------CAAGTAGTTAGTGGGGATCCAAGAAGGGTTCTTTGAAAAGTCAGACTA-------------TGAAAAAAATAAAATAGGTTTCTGTATTCCGAGTTCCTGACCAGATGTGGGA----TGGGGCACCCGCAGAGGGCCCTAGCA-------GCACCGGCCTATCCCTGCCACCACCTCCCGG-------TGGGTCAGGTTTCCAGACCTCAGAGCTTAGATTTT--GCAGCATAAATTTGCATCCAGGACAGACAGCG-GAGGCAGAGGTAGGAGTGGAGAGAGAATGGGAGTAGGGCCAAGGGGCC-CACGAGGATGTAGACCTGGCCCCTGTCGGTCCAGTATACTCCCCGAAGAGGCCGGACATCCTCGGAGGTGCGCGGATCCCAGACCCTGCGTCGCACCAGGCCGGCGCTTCCTGCTTGCCCTTGACGGCAGGAAAACCCTCCAA---CTGGGAACGCGGGAGCCCTTTAAATTCCAGGGTTTGCCCCTTCCCTTGGAGCCCTGGCTGCAGCCCCTGGAGTCCCAAGGAcccccggcagggcggggcgggagcggcggcgggaccgtgcgcccgccggcTAGCCCGGTCAGCACAGATCGGCGGCTCCGCTGGACTGAGCCGCTGTGGCTGCGCGCCGAGCCCCGCGCCCCCTGGCTCTGCGCCAggccg-gcgggcgtgcgcccggcgcgcggcACTGCAGCGCAGGTCATATGAGCAGAAATGATGAGAAAAGCACTTTTTAATCTTTTCGCACTTGCTCTGCCCGCTCAAACAGTTGCAGGATGTCGATGACAGACTTGCTCCACGCTGAGGACATCAAGAAGGCAGTGGGGGCCTTTACCGGTGAGCAGCGCGCTCCC--------CTCCGCAT----CCCTGTCCCCTCATCCATCTCCCTGGCCCCTGCACCCCCGTGGGTCCCGCGGCTGGCCAGTCTTCCCGGCGCTTCTATGCTCACGCTTCCGCCGGGCGCTAGCGGAGCGTGGAAGAGGGTCCACGGCACTACCCAAACTTGGCCCCGCCAGGACCTGGCGCAGACAGCGAGCTAAGAGGCCGGGCGCCTGGCCTGACAACCGAAACTCTGGGGCGCCAAAGGCTGGGTAACCGCGCTGCGAGGACTC------AGGTCCCGGACCAAGGGCGAAGACCGGGGTGGAAAGCG---GGACCTCTGGGTCCTTGTGAGCGCTCGGGGCTTTTCAAGGCACTTGGAGGGGCCATAGG--TGCGCATGCTTCTCTCCCCGCGACCCCTTTCCGGAGAGGGCTCTTTTCGCCTAGCTACTGCTTGCTGG---TTTCCTGAATGTCCAAGCCCCTTCTCCGGGGCTCAGGGCCCACCCCGCTCAACGGATCTGCGAGGGAGCGAGATGACCTTCCCCAAGCTGGCGCTCTGCTTTGCTCAGCGCTGCGCGCAGAGCATCCTCCGCGCTTGCAACTTCCAGCCTCCTCAGGCA--CCGAGAGAGGGGAAC-----GGACAGTCTCATGTCTCTGAGCTGCCCTGGACTTGAACGCTTAGCTGCTTAAGTtcctcctccctcctgtccccgagatggggaaactgagggaggcagagggttagaaacttgcccaaggtcacttcgcagggcagaagggggatgagcacgggggtcacctccaggtgctgtccccaTCCCCCTCCATCTAGTGTCTGAGGTGGACAGAGCAACTTTCCTCCCCTCCAGC------CAGGGAGGATACCTTGACTTT a score=76528 s mm7.chr15_random 3927693 3992 + 7075849 TGCTTTTTATATAGCTTCCTTCTCCTCCAGAC--------------------ACATACAGGAAGCTCCAAGAAGCCCCCC-------------------------------------ACCTCCC-CCTGGAGCACTATGATAACCCATTCACAGTGCCTTGAGCCACCTTGTCACCCTGAGTATGAAACTCAGCTGAG--TTCTT-AGAAGTCCTTCAT--CCCACCCCCA--ACCACTGGGATGGGTCTCAGAATCTGTG-CAGGACTTCTGGGTCCTCCCCTC-CCCCTCCCATGATGTGACCTTGACAGAACTATGTCCTCACAGAGTTGATCTTTCTGATCACAGTAT--GTAGCCAATGAGAGAAAG------CCGCCTTTCCATC----------CATCCTAGCTAGCATCCATCGCATGCCTGTGCACA-GCCCACCCAGCCCTCACCCAAAAGGCTTCATAGAAATACAGTTCTCAGGAGGCTGACAGTCTCCCTGTGGCTCATCAGTGTGTGTA-----------------TGGGGGAACCAAGAA-----GGGT------------------------------CGACCTTGGGCAAAGCATCCTTTCCTAG-CTGGGCTCCCTCTGTCCTCCTGT---------TCCCCACAACCATGCAGGTACCCTTTAATAAATGGTACA------ACATCTC--TTTCCCTGACTTTCCCGGTGCCTCTCCCCTGTCCTT-CTTTAACCTCCTCTTCCCCCTCAACCCCCAACAGCTGCAGACTCCTTCGACCACAAAAAGTTCTTCCAGATGGTGGGCCTGAAGAAAAAGAACCCGGATGAGGTGAAGAAGGTGTTCCATATTCTGGACAAAGACAAAAGTGGCTTCATTGAGGAGGATGAGCTGGGGTAAATTGAGG-------------------------ATGGGGCGGGGAGCAGGGCGGGGATGAACCTGGTGATAGCACCCAAAGT-TCCCAGCCACCCCTCCTAGCAAGCGGGCTTTGCTTTGTCCCGGGCACCAGGGAAAGATACTTC-----CTGCTTCCGGGAGGGTCAATCCCTCAGCCTGGAGTGCAGCTAACTAGGTTAAATTATAGCCACTTAATATCGCTAATGGAATGGAGTTACTTAATAATTTAATACCAGTGAAGGAGCACTTATTCTGACTGCTTCCCACCGCAAGCAAGGCAGGAGGTATTCTCCTCAGAGTGTCATTGATTTCTGTGGGGCTGAAAGGCACCTTCACTGGTCTGGTCTGCAGACCCCCCTCGCCTCTGGACCAGAACTGCAGCCAAGCAACTTCTGGGCAAGCCA-GGGAGGCAGAGGCGGCTCTG-GATCTTTAGGGTCCTTGGAGCAAAGCTCAGAGG---------------AGACTGGAAACCTGCATCAGCAGAGAGCCCTCTGCCCTAGCCCGCCTCAGCCACCTGGCCTGTATCTGATGACCCAGCTGTGCCTTCTGTTACTTTCTAGCCAAAACGGCTTTGAATTTTGTTAGAAACAGAAGGCAGAAGGTGTTCCGAGATGCATTTTAAGTAGGAACTTCCCTCAACCTATCCTGTCTCTCTTCCAAACTCTACCCCAAGGACACCTTCT-TCTAGAACCTTCTTCCACCTACTTATGTATGCCCGACAAGTACAGGCACAGGCGTGTACACATGCATG--CTAAGTGCTCCCCATCCTCCATGTATCACCATCTCTAGAGGGCCT--CCTAACTCCTCCTTCACC-------------ATGCTCCCCTCTGCCTCCTCCGTCTGGGTGTCCATCA----TTCCATCATACATGAGCATGAGGTCTGTCTCTGAGAACTTGCCCTCTTCCTCCTTTACCCA---------GAAAG--------------CTCATTACAATCACTACAGTGG-------------CCCCAGTAT---TTTTATGTAGTTATTGGGTAAGCAAAGGCAAGTGTGCCCTA----AACTGGTGTCAACCCTGCATAGAGGGCCATCC-CCCACCTCACACCCACC----AAGGCAAGCCACA--CAGGCCACCAGG-CCAACCCAGCTGCACACAGGTCTCCCACCACCTGCCGCCTGTCCCTACTTCC--CTGGCCCTCTGAGGATGCCAGCCCACTGTCCAGCAAGGTTCTGCCTGTGACCTTGACCTGACT----------------ACTTTTCTCCCCCAGGTCCATTCTGAAGGGCTTCTCCTCAGATGCCAGAGACTTGTCTGCTAAAGAAACAAAGACGCTTCTGGCCGCTGGAGACAAGGATGGGGACGGCAAGATTGGGGTTGAAGGTGAGTAGCCGTGACTCTAACTCTGGGAAGGCTGGGACTCTGGGGTATGCGGCTGTC-AAAGCTTTGGGCTGT------------TG---AAGGGAACAGGGGATGATATAAAAAAGAAAAAGAAAAAAAAAAAGACAACCCAT-AGGTC-----ATTCTGCCAAGTCCAAGTCTGCTAGGCAGAG-AAACTCAGCTATATATGTTTTCCAAAATGTGAACAACCCATAAGAAATG------------------CCCCCCCCCTTTCCCGCTGGGTAGGGGAATGTGGGAGGGAGAATTGGAGATTTTCCCTG--------------TTTTGcttagtttctgatccaggagctgcctacattggctgtgtgaccttgggcagtgtctgcccttctctgaaccagaggctcatgtctgtaatcagaggagat-aggcccactgatcGATCCCCCTGTACACCCCCCCCCAAGGACCCT-CAGGCCCTTGTAGTGTCAGATTCCAAGGATGGAAATTCCTTATCTACTGCCCTCCCTGGCGTCTCACCCT-GGTGTCTTATAACCTCAGATAGGGTTTGGttttttttttttttttttttttttGGCTTCATTCAAAT---TCCTTCCACCATTATAGGAGAGCCAG-----------------GAAAGACCCCCCCTCCCCCCCAAAGTACCCAACTCCCAGCTGGGAGTTAGGATGTGCACTAAAGA---------CGTGAGC----------ATCTTTGCTCTGAGCCCAGGCACGAGTCTGCTGGCCCACTACCCCGAGTCCTTATCTGGTCAG-CCTGTCTGGCGAGGCGTGTGGGGCACATCCTAGAACTGTCGGCTTTCTTAGCTTCGTGA-------------------CACTTTGCAGAGGGGCCA--CGAGGGTGATCATGGCCTTTGCCTGGTTCAGAGAGCTAGGACA----CGGGGCGTGA-----CAGGGC----------------------------------------------------------TCAGC------------------------------ATGCTCTG--------------GGGCTCATACCCCAGCCTTTTCTAGGGTCTCTCAtcatgtaacttcag------------------caggactcagcaatttcatctctgg-------gggacgatggttctcctctcat----------gaggaatccatgtgctaatatgtaaagtacttaagacaggaccaggcagagtatatagcaagtgcCTTCTGTGTGCCTGTTAA-----CTGAAAAAAAGTGGGGGGTGGGGCTAGATAACATTTGCTCTCCAACCCCCCAGGGTCCATTGTCGAATTGAAGCAGGTA-TTACTGAACACCTGTTGCCTGAGGGGAAAGGTCTGACTCCCACACTCCACTTCCCTTCTGCTCCTCACTACAAGTAACCTTGGCCA-CATCCCCTGCCAGTACATACCTAGGCTCTCTTGCCTGGCACGTGGGTTGTTGCAGGAGCTCACGTTGGGACCTG--------------------TAAGTGG-TGTGGACAC-AGATTGCTTTGGGGAAAGTACAAGGTTCCATAGGTACTCAGAAACTTTATTAAGGGGTTTTTAATGAAAGCGAGAATG-------------AAGTTCAGGTGCAGAGGGTGCCTTGGCCACCGGAC-ATAGCTGTTCTTCTTTTGGGT---GGCAGGAAGGAGGGGCCTTTTGAGGGAGCTGAGCAGACAGTACAGGAGAGACA-----------CTTAGCTCCTTGACAGCTCTTAGTGTGTCTGCCAGCAGCTGCA--CTCA--GAACCCCCTACTCCTCAGTCCCACGCCAAGCCTGGCGTCCCCTACAGCTCAG---------TTTGATCCTACTCCCCTTTCT--------GAGATAGG-----GCTC-GGAGCTAGAGGCAGGGTCTTCA-AGCTGGTTGCTCCCAGCCAACCTAAGTGATGAAGAAAACCAGGGCAGGCAGTTCTTGACCTGGTTCC-CTCCTGCCTCCCCAGCTCTCTG-CCATATTGGGTCTTCCAGAGCCAACTAAACTCTT---TCAAAATGTCTAGCACCAGGTGAGAGAAAGATAATTAGGACAgggactggtgagacgactcagtggctaagagtgctggctgttcctctagaggaccagagttcaattctcagcacccacatggcagctcgcacctgtctgtaactccatttctaaggatccatcgcaccgggca s bosTau2.chr5 31462819 4299 - 76426644 TACTTGGTCTAAGGTCGTTTACTCTCCCAGATTGTCCTTAAAAAAGAGCTCAGGGTACAGAATATTGAAGGGGGGCTCCCTTCCTTTCTGCTTGGCACTCCATCCCCTGGGCATGAAGCCTCCCTCCCAGAGCCCTGCGATAGCCCACCCACTTCTCCTTGACCCGTCTTGTCCCTCTGAG-AGGAAACCTAACTGGGAATTCTTGGGGAGACTTCCAGCACCCACCCCCACTCCCACCGGAATGGCTTTCTGCAGCAAAGCCAGGACTTCTGTGTCCTCCCCCCGCTCCTCCTACTAGGTGACCTTGAGAGAAACTTGTCCTCTCCGTGTTGAT-TTTCTGGCCACACAATCCATGGCCA---AGAAAAAGGTCGACCCTCCTCCCCAACAACAGACACACATCATATTCACTCTTCCTTCAATTCCCGTGCCCACCCCCACTCAGCCACCACCCAAAAGGCTTCATGGAAAC----TTCTCTGCCTTCAAATGCTACCCCTAC-CCTTAGCGAAGggtatagtcgaaggtggagggagttggggagccagggagatctgggtgcaatcctccctctgccacccatggctgtgcaaccttggtccaaacccccttgcctggcctggactccctcaGCCCTGCCACGGAGGTGTATCTCCTCCATCCCCCAGG------------ACTGGCCCAGCTGTGACACCCCCATTCTCCCACCTTTTCCCAGGACCCTTCTCTGTCCTCATTTTAACACCCTCCTCTCCAT---CTCCCAACAGCTGTCGACTCCTTCGACCACAAAAAGTTCTTCCAGATGGTTGGCCTAAAGAAAAAGAGCCCGGAAGACGTGAAGAAGGTATTCCATATCCTGGATAAAGACAAGAGCGGCTTCATCGAGGAGGAGGAGCTGGGGTAAACTGAGGCCTGCAGGGACTATCTTCTGTGGCTCTGGGGGAGGGAGCAGGGTGGGGGTTGG---GACACTTGCTTCCAGGTTCTTTCTGCCTGCCCTGCT---------------CTCTGCATCCGTCAC--AGAAAAGAACCATCTGCTGTTGCTTCTGGAAGAATAAAATCCTCTGCAGAAAGTGCAACTAACTAGGTTAAATTATAGCCATTTAATATTGCTAATGGAATGATGCTACTTAATAATTTAATACAAACTGAGAGGCACTTTTTCTCATTGCCTAACACCATAGCCAAGACAGAGAGCGCTCCCTTGAGTATTTCATTGATTTTCATTCCTCTAAAAGCCACTTTCCGCCATC----CCACAGACCCTTGCC-CTTCTGTACCATGATGGT--TAGAACAGTTTCTGGGCATGTCATGGGGTGCGGAACCAGCTTTGAGGGGTCAAGAGTCCTGGGAGCAAGGCAGAGAAGGTTATGACTAGGAAAAGGCAAAAAAATGACATCAGCAAAAATCCTCCCACCATAACCC-CCTCGGCCACCTGGCCCAAGTCTGCCAATCCAGCTGTGCTTTATGTAACTCTCTGGCCAAGACTGCCTCGAATTTTGTCAGGAAGAGAAGGGGGAGGGTGTGGAGAGGGGCCTTTCAAGTAGAGACTTCCCC--ATCCATCCTGTCTCTCCCCTAAACCATCTCACAAGGGTACCCTTTGTCTAGATCCTGCGCC--TCTACCTTCCCATGCCCAGT--GTGTATGCGCACGCGCACACACATGCAAAGTctgacttctgtttatcctctaggcgtcactttctccaggaagcctcccctgactCTTCCCTCCCCTTCAGTGGGATGGATGCACCATTCAAGCAACCGCTTTCCACTTCCCACCATTGCTTCCATCACAC-----TGTGTGGCATCTCTTGGAATACTTGACTTCCTCCCTGTTTTTCAACTTGGCTTCCAAAGACCAactctatgcccccatttctagcatgtccctggcacagagaagataccctggtatttgttttgttgactgaataaatAAACAAATTCAG--GTGCCCTAGCAGAAGTGAGGGCAACCCTTTGCTGAGGACAGCCTGTCCTCTGCACACCCATCCGTGAAGCTTGGCCATGGTGGGGCTACCTGGCCCAGCACAATGGCATGCATGTTCCCTGC--TCATCCTCCTCTTCGAGCCTCCTGCTTCCCCTGTGCAGACGTCAGCCCACCATCCA-CAAG---------GTGACCCTCACCTGATTCCCTCCCCCTTTTCTCCCTTTCCTCCTCCAGATTCATTCTGAAAGGCTTCTCCCCAGATGCCAGAGACTTGTCTGTTAAAGAAACCAAGACGCTGCTGGCTGCTGGAGACAAAGATGGAGATGGCAAGATTGGGGCTGATGGTGAGTACCCGTGAC-------CTGGGCACATCGTGGGTCTGGGATGTTTGGATGCCAAAAACTCAGAGCTATGTCCCTCCATCATGAGCAGGGGAGGGGGGAGTCCCGCAGTCCCCAAGATACGAAGAAAAATGGCAATCCGTGAGGTCTAAGAGCTCTGTCATGT--AA----GCCAGGCAAAGAAAAAATTGCTAT-----TTTTTCTAGATTTGAACAACCCCCAAGGAATAGATCctctctttctctctctctctctctctctctctctGTTGTGTAAGGAATCCAGGAGAATTGGGGATATTTTCTGAACTTTGTCTGCACTTCTGcttgggttctggtcgcagctctgcccaaatgggctctgtgaccttgggcagtctctctcctactctgggcctcagcctcccatctgtaacccaaggagatgaggccaactgat--------------------ccccaaggaccctactggctctcacattctcagattccaAGGATGGAAATTCTTTCTCTCCT---CTCCTCAGCATCTTGTCTTGGGTATCCTGTAACTTCAAA------------------TTTCAAAACCTGTTTTGGCTTCACTCAGGTATACCATTCCAGCACTGTAGGAGAGCCAGAGAGGGaaaaaaaaaaaaaaaaa---------------aaaCCAGCCAGGGATCAGCTGGGAATTAGGA--------AAAGAAACATCCAGCCTGACCTTGCTTTTTGAGCTTTGCTTTCAGGACAGGCAAGGGGTTGGTGGTCCACCATCCCACACCCTTCTCCATTCAGATCTATCCAGC----------ATTCACATCCCAGCATCTttatcttttgtagcatcacaacatccttaagaatcatctccattttgcaaatgggcaaactgaggttg---aaggtgcttgacctgctcagggaggtaggacataagtggggagtgaggattcagaaccacgcagctctttccaacATGCTACACCACATCTGTGCCAGTCCTAATGATGGTCCCTTCAGCCAGTTTAAAAGGAAACTGTAttaaatgcttaggctctgggcccgtgctgtctgggttcaaatcccagcccagcc---actttctcactgtgtgatttggggcaattcaagtaacttcttaggcctcagttttctcatctctgaactaagcataatgatgcttcctatctcattggattgtcagaggattacctgtgttaatgagtgatgtgtacagaacag---------tggtacagag-aagtgctatatacatgcctgttTAATTTTTTTAATAGCA------------GCTAGGTTACATTCATCCTTTTA-TACTCAGTGTCTA--GCCCACACCCAGCCCACACTTAATACACATTTGTTGCTTGAGTATGAAATCCAGCCCCCTATGCTCTCCTTGCTctctgctcttcaccagttgtgaccttgaccatcagctc-------tccacacctaggttcctgcatctgacaaacgg---agtgcacagttttatcctaagacctgcctgggctcattgtaaaaattaagtgGCTGGAGACACAAAATTGCCTTCGGAAAGGTACAAGGATTC-TGAACATGGACATAGTTTATTAA-AGTTTTATGCCAGAAATGAGAATGGAGCAACTCTAACAAGGTCAGAAGCAATGAGTCGCCTGGCCTCCCGTTGGCAGCTGCCCTTC--CTGGGTCTGGGAAAGAGGGAGGTGGTTTTAAAAGAACCAGAGCAGAGGGTGCTAGAGGGAAATGGGTGGCTGGTTCAGGTGATTG-CAGTGAATGGCACATCTCCCCACACCCCCATCCTCACCGGGTCACTTATCAGACAGTTCCACCCAGAACCTGGTTCCTGTCATGACCCCAAGCCAGGCCTTTGGACCTCCTTCCCATTTTTATTTGCAGAAATATGCTACAGCTCAGAAGCCCTAGGCAGGGTCTTCATGGCTGGCTGCCCACAAGCAACCTACACAATGAAGAAAAACCAGGC---CAGATCCTGGcctccctccttttctccctccctccttccctGCCCAACTCAGATCTTAAAGCCCTAATTCAACTCTTCAATCAAACC-----------------AAAAAGATATTT---------------------ACTAAGTAGC---------------------------------------------------------------------------------------AAATATCTACAGTACCAGGCA a score=9184 s mm7.chr15_random 3931849 1948 + 7075849 CAGGGGAGCACTGAAGGCAGTGCTCAGTAAGTACCCAATGAATGGTAGCTATGTCCTGTTAGCTACATTCTGAGTATGGCCTTGTGTacaaacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacacacacacacacacacaAATGGTCCTTCAGTCTGAGTTAGTCATAATTAAAAAGCTCAGGACCAAAGGATGTATTGGATTCCAGACACGTTTGGATTTTAGAGTATTCACGTAGTGTGGCCATGGTCCTGAAAGGGTTCCAGATTTCCATGCCAGGCAAGTAGAGAGGTTCAGGCAGCTGAGACA---TGGAATCCAGAGGCTAGAGTGGTACAGGTCAGGATCCAGCAGGCAGAGGTAAGTCCAGGCACACCCTAG-----CATCAGTGAACCCACTGAGGCACGGATGGTTAGGGAAGGTTTAGAGA-----------TTGGTTTTCC-------AGGAGCCATCAAGGGCTACTCCCTAGGTGTA----GTGTGTCTCAGGCTAGAGCTAGGCTGTGTG---GTGTCATCTCCTTTTCTCCTGGGATGACCGAGGACATCCATTCAGA------AAAGGCAGCTCAGGGAGGCCAAGGTCACACTAGGTTCGAGATCTAGGCTTCAACCGCAGTCTATCTGACAGCACAGTGGAGACCTGGGCCAAGCT-ATGCAGGCTGCATAGCACTTCAGGCTCCTGGAGGAACAGACAGCAGGAATGAGAGAGGGGACG------------AGGTGGCATTGTGTCATGAGG-----------ACCCTAGGGGCCTGTGCATCCCTAGTGAAGATGCACATGCCCACTTCTGTAACC----------CAGTTT------------GAAAAGGATTGAT--------GCCAAACAAG-AGTGCCATGGAGGAGACAGAATCCTTCTCTGGGGCCCAGAATGTTTTAT------------------------------------GGTCAGAGAATCTTGAACCCCACCTCTAGCTTAAGGATG-CTTCAAGTTCTGTTGGATCCAGG--CAACTCA---------------------AAGTGCCCACCCTGGTCTTTAGAACCAAGACTAGCTAACCATCCTG------------TCCCGG---------AGGTTCTTCTGCACGAACGACCTTGAATC-AGGACTTGG----------GCTCGGC--TGTGACCCTGAACCATGGGAGCAGTCACAGGTAGCTT-------TTCCTATGTGCCAGACAGTGCCCTCTGC-------------TGTCTTCTTAGCTGcctgtgaggtagataccactagggctcccactttagaggcagggagagtggggctcagagG--------------CAAGGAAGAGGGAGATGGTCAAGATGAGTGTTGAGGTCTGCTTGCTTGC--AGCAATGGCTCC-TGCTGCCTGTTCTATACCTGGGATGCGGTTGGAGCTTAGTCAA----CGCCTAGCATAAGATGGCATTAGATACTTACTTACCTTGTGGCTTGCTTCTCTCCACCATGCTTG--GGTTTCCCTAAAGCGTCTTCTTTTCCCCTTCTTCTGTTCTCAAcccagcactaagaagaaggcctggtgcacagtgggggaaaagagaaatttgtttagtgaatggatAGGAGACGGGAGAAAGGAATGAACGCAGGGATAAACTAGGAAACGAATGACTCAGTCAGTCATCCAATCAATCAGTTAGTGAGGGAAAGTCAAAACAGATGAATATGTATCCTGCAAGACTGCAGG---AAGGAGCAGGCCCAGCTCCAGCATGTAAAAAGACGCTCTGCATGCACAGGGAATAGGGGCTTGTA-GCCCCAGGTGATCTGGGAGTGCAGGGCCAGCAATGGCTGCTCTCCCCAGCT----CTTCTTGTCTCTCCAAGGA-GAAAGATGCTTGCGTGGTTCTTTAAGAGCCCAG-TTGCAGGAAGAGAAAAGGAAGACACTGTTATAGCAATGCTCCTTCAGACTCTGGTATCT----------------------AGGGCAGC-----TACTTCCAGGAAGTTTAAAAACATGTATAGATGTGATCAATTGCTA----ATGGCCACCCTTAAAAAGCTGGGACCCAGCAGGGAGAGGGAGGGG---AAGCAGAAAAGGA s bosTau2.chr5 31467226 1898 - 76426644 tatggcagtgcggagtgcagagcactgtaagtgctcagtaaacagtggc--tGTCATACTATTGCTATTCTA----------TCTGTGCAAG-GCTCACAGCTCTATG-----------------------ATACAGACACAAACACAGG---------------------------------------------------------------GTAAATACCAGGCAGAGG-CCGGGAGGTGCATACGA----------------------------------------------GCTCTGCAAGAG-----------------------GGAGACAG---CGGGCA-CTGGTGCAGACTAGAGACCATGGGCAGGTCTGCCACAGGCCAAGG---GGCAAGTGGAGGGAGGTCGAGGCGAGGGCTGGGTATCAGTCAGCAAAGGCACTAAGGCTGGGAGGTTTAGGGCATGTTTAGAAAGGGACTAGAAGCTGATTTGCTGAGGGTGGGAGGCAAGAGAGAATGATTACCAGGGTGAACGATGTGTGTC-CTGTCCGAAGCTGCACTCTGCACACACGTCACCTCACGTGACCTCGGGATGACAGAGGACACAGATGCAGATGCAGGAAGAGCGGCTCCAGG-GCCCAAGGTGACACTGGGGCCA-------------AACCCGGGTCTGTCTGCCAGCACAGTCCAGG-CTCAGCCAACCTGGTGCAAG----------TGTGGGAGTCAGGGCAGAACAGAAGAGAGGGGCGAGAGATGAAATGGGCAACAAGAACAGGTCACCCTGAGGTGGGGGGCCACATCTGGTACTCTGGAGATGAGAGGA-------TGAAGACACGCATCCCCGCTTCTGCCCCCGTGCACCATACTGTTTCTGGAGGGCGACAGGAAGGATGGGTGTGATGGAGCCCAGTAAGCAGCGGGATGGA--AGAAAGAGCCCTCCGT--GGGCCCAGAATTTTCTATTTTAGGCTCTCTGCTTTGCTGCCTACTCCCTCTCAAGGCCAAAGAATCTAAGCCCTGTCCACCAACTGGAGGACGCCTTCAGCTCCCGGTGGGACTTGGAACAATTTATGGAACTTGTCCCTGACCCTCAGGTGCCTGCTCTTAACATTAGCAGTCAGATGACTGGCCAATCCTGGGGTCTCTTCAATCCCTGGGACTCCCCAGGTGCCCCAGTGCATACACCCCTAGACAGAGGGCCAGGTTGCCAGCTAGCTCAGCTGTGTGACCTGGAGTAGGAACAGCAGTGACATCTAACTCCAATGTGCCCCCTtgcgccacacactgtgcttagcattttactcatttcatctccccagcttcttttgag---ggtactactcctatacccattttacagatgaggacactgagactcagagaggctaagggtttgcctaggaaga--gacaaggtcaagatctgagttcgggtctgtctggatccaaagcaagtgctctGGGCTGCCTGCTTTATCCAT------TCATTCATTCCAAGTCAAAAGGcatctaccat-agatgactttatttattgactta--ttgcgtctctcttc-ctctgggatggatgtcagctccacaaaagcaggaactttg--tttggttcaactctgaccccaacacctagaacagagc-----acatagtaggggttaaaaaaaa--agttcaatgaacgagt------------gaatGAATGAATATGTGTCCAGCCTGGGGATACAATGAC-----------------------------GAGGAAGTGT---GGTATATAGGGAGCTGTCCT---------CAGGCTAAGGGTGGAGACCCGTTTTTGGC-------------------------------TGCGGGCTTGCATGTAGCAGGTGCCTGGGGTTTCCAGAACCAG----GGGTACTGCCTCCATCTCTAGCTGCTTGCCCTTCTGCAGATGAGTGATACTTACCAGGTCCTTAAGTATCCCAGACTGATAAGAGTGGGTAGAAAGACAAAGTTCTAATTATAACCCTTTGCTTTCCTGTCTCTCAGGGAAAGAGATGGGAAAGTAAAGGAAGCTTCCTTACTTCCTGGAAGCTCTAAGACTTTTATAGATGTGGTCAATTGATACTCGACAGCCACCTTTGAAAGCCTGTTGCAGAGCTGGTAAAGGGGAGAGTTAAAGTAGGAAAGGA a score=2227 s mm7.chr15_random 3934404 204 + 7075849 AGCTGGACTTGCACACCACATGC-CTCACAGCCGGGCGCACTTGCATTTGTCA-----------CCCAGGCCCAGTGATGATGGCTCTGCTTGCTTTGTGCTTTGTGCCAACTACAGCTCCAGCACCTGTGCCCTGGGTTTTCACTCCTTTAGTTGA-ACACGTAGTTAC-------------------------------TGGGGTTGTAGGGATGGAGCCTTTCTGCTTCCTTCTGGCAAAGTCCT s bosTau2.chr5 31469814 243 - 76426644 AACAGGAACTGCACGCCCCATGTACACACACCCACACACAGCAATCCTTGTTAGTTTCCTGAAACCTGATCCCAGTGGCA--GATCCCATTTCCT--ATGCCTCAGGCCTGGTCCAACTCAAGAGCCCATGGTTTGC-TTTTTGCTTCCATGGCTGAGAAATTTAGTCACAACGATTGCCTGACCCTTGCAGTTGGTTCCATGTGCCTGAAGGCATTTGCCTTTTCTGCTTCCTTCTGGCAAAAATCT a score=38103 s mm7.chr15_random 3934781 1793 + 7075849 TTATAAACCACCTTGCTCCTCCATTGAAAAGGAATTAAATCCTAATCCACACAG-AAATAGAAC----TGTGAGATAGGGGGAGAGGGGGCAGGAAGGACAAGAGACCCCTGTC---TCATTGTGATCCCCACCTGTCTGCTC-TGTGGGA----------------------GGGTACCCATGAGGGCCAGCCCACAGCCCTTA--------------GGTGGACATTGTCTGGTCCTGTCTCACTGTCCCTCCCAGCAGCCCCAG---AGGCCAGGAGACAGGGgtctcagtcctcactgagagatgtgtaaactgaggcccagtgaatgttgagGGCCAGGG--------CATGCCCTTGGTGGGATGTGACCTGGGTCTCCTT-CGCACGGGCTTCCTCCCCGAAGCCGAGCTGAG-CATTTGGAGTTTGAAATGTTTCCGTACTTAGCAATCTGCT--CCTCTATTCCCGGGCGGACTTCCGCTAGCTCC-GGCCTTATGCTGCACTAGATAAGATGGAGC--AGGGAGAGGACACGGCACTACTTATGTAACCGGCCTCTTGAAAAATGGAGCAGCGGTCAGGGCGGAAC--AAGACGTCCTCTCTCTACGCATCCCTCTCCTTTCCCTGCTAAGGCTGCAGCTGGAGTCAG-AGGCAGGGCTGTTCCAATCTG-TCTTTGATCAGTA-ACGCAGCCAGCC-----TCCAGCCTCCGTCAGCCTCCTCATGGCTGAG----ACCCGGCCTCAGTTTCCCC--CACTTACATCCCGAGGATCAGA--GCCTGTGAGGATGAAATGGGA-------TAAGGTAGCTGGAACCGTCTGGCAGAGAGCGAGTCCTCAGGACTGTTGAT--GCCTGTGGCTGCCT---GGCTTGACCCCAAGTGACCCCGCCTCCTCATCCTGCAGCAGGAGAAAGTGATCC-TGTTTGCGGCACCCATCTATAAGAAACTGAGCCCTGGAGCTATTTTGAGGCGAGGTGAGGTGATAAACCAGGAGCTGGGCCCTTGCTATGGTCATCAGAACGGAGGGAAGGCAGGC--CTTCCAGACGCTGACTC------CCTGAGTCTCAATTTCACTCGGGGCTATCAGCCTTCGCTGGCCTCACCTGTCAAGAGCTTCTAAATTTGTCCA-TCCCCACAGCACCCAGGACTGGGGCAGCCCTAATTAGGCTAATTTCAGTTTCCTAAGGG-AAGGAGGAGAGTG-----GCTCAGCCT-----CCTCTGCCTCCCTCCTGCCATGCT--CCCTTGTGTCTCCCTCTCTTTCTGATTGGATAAAGACGACATCAGAAAG--TGTCCTCAGGAGGATGGCTTGGGATTGTGCTGTTCCCATATGTTTTGCAGGAGAAAGAATGT-TCTAGATTTTCCTAAAGGAAGCATGAGCTTCATACCTCATCAGTAACTGACTTGGTTGTACTCATTCTGCGTGCCAGGTGCCTCTCATCTGTGTCCCGTGAAAGTCTTTCTCATGACCTTA-----------tatagctgtccccattttacagatgaggagactgagg--------------------------------------tggggttctaacttgGATT---------GTGTCAGGTGCTTACACGAGGTTGGCTGTTGGGTGTTTGAGTTTCCTAGAT----GGTCTGACTCCATCCTGCTTGACCTT--------GATTTGGGAGATTGCTATAGGAGGTTC----------CTTG--CCAATTGTGCTGTGGAGGTCCAAGGGAGATGGCACTACCAAATGCTACCAACAGCCACCTCCTCCTATGTGCCAAGCACTGTTGTGTGCTTCCTTGGCTGCTCTTCAGGAAAGTGGCATGAGCTGGCATTATC---CCCACTTCACAAA---GAA-------------AGACAGCACG--GTGGCCCATGGCTACCTAGCC------AGTAATAATGGAACAAGTCACAGG--------TCAGGGTGGCTGTGTGGTCATGGGAGGATGCC s bosTau2.chr5 31470762 1927 - 76426644 ttaTAAGCTACCTCAA-AATCCTTTGCAAAT-AGTGGAATACCCACCCTCAAAGGAAATGAAACCAAGTCTAAGACAGGAAGACAGTGAGAAGGACAAA-AGGAGAATCCTGCCGCCTCCCTGTAATTCCAGCCCTCCAGCCCCTATGGGGTTTGATTTCCAAGGCAGGCAGGAGGTGCACACCAGGGCCAATCCGCAGCCTTTATGGCAGAGCCCCGAGGCGTGCAGTGTTTTGTCCTATTTCATTGCCTCCTCATCCGGGCTCAATACAGTCTAGGGGACGGagtctgtgatccccagtgagagatgtgaaaac--aggccccgcagatgtgaagtgtcaaagtcacacagcaagcccttggccgaatggaacctgggtgtcctgactctgccactccctccaacaggctgagctgGGACATTTGAGTTATAAATGGTTTCTGTGCTTAGCAAGATGCTTGCTTTTATTCCCGTGTGGACTCTCCCTAACTCCCAGCCTTATGCTGCACTAGATAAGATTTAGCCAAGGGAGGGCAGGCAGCACTTCTTATATAACCGCCCTCCTGCCAAAAGGAACAGCAGTGAGGGGAGAAAGAAAGATGTCC--------------CCTCTTCTGGCCCTG--GAGGTTACAGCTTAATTCAGCACTCAGGGCCTTTCATTTCCAACCTCTGAGAAAGAGACGCATCCTACCATGAGCCAGGCCTAAATTATAATCTTCCTGGCTGAGTGGCGcttggcctcagtttccctgtaagtaaaat---ggggataagaaGGCTGGTAAGGATGAAGTGGGACGGATCCTAGGGTGGT-------GCCTGGCTCAGAGGGCACCCCCATTACTGTTCACCGACTCTTCACTACCTTCCGCCTTGACCTCGAATGACCCAGCCTCCCCGTCCTCTGGGGTGGGAAAGTGATCCCTGTTTGCAATACCGATTTATAAGAAACCCAGCCCAGGAGCTATTTAGAGGCGAGGTGA-----TAAACCAGAGGCCTG-CCTTCATCCTGCTCCTCACGACAGAGGGGAGGAAAGCGTCTTCCAGGCGCTGACTCAAAGTTCGTTCGTCTCACTTTCCCCTCAGGCTATCAGCGGGTGCTGCGCTCACCTGTCAATAGCTTCTAATTTTGTCCAACCCCCACAGCGCAGGGACCTGGGACAGACCTAATTAGGCTAATTTCAGTTTCAGAAGGGAAAGGAGAGGACTGAACCCGCCCATCCTCTGACCCTTTGCCTGCTCCCTCCTCTGCTCACCCCCCACCTTTCCTCTCTTCCTGATCAGATGATGAGGACACCAGCCAGGTGGCCCCCAGG-----GGCCTCAG---GTGAGGTTTCC------TTGGCGAAGGTAGGGATGCACCTGAATCCCTCT---GGGAGGAAGGGCT----------------------CTGAATGTCCCCCCAC------CCAAGAACC-----ACTGtaccttgtg-tagtcctcactgtcaccctacgaggagatactctcagtgtccccattttacagatgcagaaactgaggagcagagaatgagtgtctGTGGACAGGCACATGAGGGATGGGACCCTAACTCGGATGGGATAGACAGTGTCAGAAACATGCATCACATCAGTGATTTGCTCTTTGGGCTTCCTGTGTCTTCTGTCTGTTTCCATCTTCCT--ATCTTAGTCTCAGGATTTTTGTGATTACGGTTGTTATTTCAAAGCCCCAACCTGTCCCAGTGGTGCTGAGGAGATCCAAGga-------actaacatttatt-----tatacaccatctcctatatgccaggcatctatctgtattttctcatcgggtcttcccaagagctgtgtaagtagacgttatcatacccattgtacacatgtgaaaactgaggctcggagacgtcaggtagtgacctacggccacccagcccaggcaggatgcgatggagcaagattcagacccagCTTCCAGGATTGTTGGAAGGTTGTCAGCAGGTGCC a score=15805 s mm7.chr15_random 3936692 1522 + 7075849 TTGAGGTATAGAAGTGGCTTGATGACAGCAGCTTCCAGGAGCTGAGAGCTTTCTCAGCACCAGACCTGTGACAGGGAGCTGTGGTGCTAGCGG-GATGAACAGCCCCAAGAAGCAGCTAATCTCCTGGGTTCCGCTTTGAAGGTGAGGAAACGGAGACA---------GGAACATCTAG-CCAAACTCACG-----AGGAGA--GGAGCTATTGGTTCCCGTTCTCCCCTGCCCGCACCCTCTGCTTGCTCCAAATGCCAAGTTAGACCAGGAAG--------TTAGACCCTTTGTAGCTGAGATGGGAG---------------GGATGAGACAACTGGTCCAGGGAACCAA--AAGGACAG---CAGAACAAGA--TCCCACCTCTACCCTCCTACACCCAGTTTGCTTCTGGGACCCAACTGACAAATCAGTTGACTTAGACTTT-CAAGGTCTCTGTCTGTC-----ATTTGATTTTCTTTGGGGTGAGAG-GGTATGTTTTAGAGGAGAC-CTTTGCCCAGAAAGCTGATAGTTGATTGGC-AGTTCCTAAGAGCATTGCC------------------------------TGACCC-TGCTTTCAATTTGTCTAC--AGCGCCCTGACCAGGGTTCTAGGAGGGGATAAAATTAGAATCC--------CTTCTAAGAGCCAGGCTCCGGGGCCTTAAGGACATCCTAGCGAACTCACAGAAGATCCTGG-GGTCTGATGTATTGGGCTTTTGAAAACCTCATAAAGCTAAAACATACTAGCAGGCTCCCAAAAGCCCAAATTCCCACC-CTGGGGAGCCC--TCATCAGTATCCC-TGGTCCTCCAC-CACTGGCTGCACCCCATCTTGTTTAGACCTCTCCCAATCCTACTGATGCCAGCTCACGGGCAAGAGATGAGAGGACTCTTT-CTGAGAAGCGGTCCAGAGCCCATATTCCCTAGTGTGACTGT----------------------------------AAAACCTTGCTCCCCTCTGA-----TATCCTGTGAGCA----ACACTGGGGAATTTTATTTCT------TCCCAGAA----------------------------------------------------------------------------------------------------TCTGGGCTGCTGGCCTGGTCA------------TTGGGCTCACACAGGAACT--TTATGAGGTCAGAGGACAaatcatagccctgtcacttatttttttatctgaccctgac-------tgcttcag-cctctgttttcctt-tctgtaaaatgggaatca------------------------------------------------------actgtgTACC---------------------ACCCTTCACCCCGCTCCCCTTCCATTCATTCAACGTCCAATTAGTGTCACCTGAAGGGTGTTAGGCCA---CTGG-----GAAAGGGATGAACCAGGGAGATGGGGC------------GGGGATG-----------GGGTGGGGACCAACAAAAATAAGCAAGAAGATAAATAAGATCATGTTGTGGTGTGCTGTGCTGAGGCTAATGAAAGTCATAAAAATGGGCCAATGAGACAGAGCCAGCAGTGGCGATATTTGAGCCAGGACGTCTGTCACTCTATACCTAGGTTAAGGGAGGTCACAAATCTCCCCAGGAAAGAAGGACTATGAGAGtgagtga--------gtgtgaccatgttaaagctgagct---ctgggacctcagtttctccatcagaaaaatgcaggcaagaatgtgtctatccgtggcagtcgtaagaattccatgaggcaaC-CCTCCCAGGATTCTTCTCACGGAG s bosTau2.chr5 31473250 1829 - 76426644 TTGAGCTATAGAAACATCTTGATaataacagctaccaaatgctgcatgctagctacagatcaagccagtgataagg-gctttagagctgcttcctctgaacagcccaaggagcca-----------------cactttacagatgaggaaactgaggcacagtgaggtgaagcacctagtcccaggtcacagaagcaagaaatgggagttgagggtt------------gactcccagctcctg--tgctccacactctgGAGGGGAGCTGGAAAGGTGTCTTCTAGACCCAAGGCTGCACAAATAAGAAAACCCAGACCTGGCAGGGTGAGGTGTCTG-TCCAGGGACATGAGTAAAGGCAGAACCAAAACCAGACCTCCATCCGCTGCTGTCCAACCCCCA------TGCCAGCCTCCTACTGCCAAATCACTCGACCTGGACTTTACAGAGTCTCTGTAGGTTTGCTTGTTTGTTTTTTTCTCAGGAGAGACCTAGACGTTTTAGAGGAGACATTTTGGTAGGAAGGCTATTAGTTAATTGGCTGGTTCCTAAGAGCTCTGCCCTGAGAGAGGCACAAAAGGAACAGAAGCGGTGACCCCTGCCCTCGATTTGTCTCCCAAGTGCCCTGCCGCCGGATCTGGGAGG--ACAAAATTAGAATCCTGTGTTTTCTGCAAAAAGCCAGG-GCATGTACTATTGTGACACCCTGACTGCTTCATGGGGGATCCCAGAGGTCTGTTTTTAGAGGCTTGTGAAAACCTCACAGGTCGAAAACACCTCCATAG-CTCCAGAATGTCAGACATTCTACTGCTGGAGGGTCCCATGGTCGGTGTCCCCTGGTCCCCTTCACGCTGACTGC----------------------CCCAA--------ATGCCATCTGGTGTGAAGGTAATAGTCAGGCTCTTTGCTGAGGAGCAGCCAAGAACGTGTCATTTCTAGGGTGAAGGTTAGGGGTGGCGTGGATGGAGGTCAGGAAATGGAAAGGACCAATTACCCCTCTTGACAATTACCCCATGAGCAGGTGATGGTGGACAGACTCATGTCTCCTTTATCCCAGAAGAGAATGACTCAGTGCCCAAGGACAGTCTATGCGGGCTCCAGCCAGTTTTTCAGATCAAATGGCAGGTTGAAGCTAGAGAGATTTCATGTTTCCATCTGACGTGAGATACTAGCCTTCTCAGGAGCGGCCTCTCTACCTTCATGTAGGGGCTGTTCCTGAGACCACAGCcaaatccctgctcctgtccctt-ctatgctacatgaccttgacacttgacctctccaggcctccactttccccatctataaaatgggaatcatcccactcgcctcctggggctgtcgtgagaattatatgcagaaagtcagtacttgctgaacacctaAGGAGGACTCATGAGCCATGCCATCCATTCatccatctgttcaccaatttggcatttgtttacaggcatctgctgggggccaggtctgttctgttgcttgagagttgtgagcaagagagatagtgccccctgacccctgggggtttacagtgtggtagggggagactgaaagaaataagcaattacacgagtaagatcatttcagagagtgata-----agtaccacgaagtaaataaaaaacggctaatatgacag-tcatgggGTGGCAATATTTGAGCTGGTGCCTGTGTCACTCTAGACCCAGGTCAAAGTAGGTTGGAAACCTCCAGGGTAAAGAGGGA-----AGTTTGAATCATGTCCTctgtgcgatcttggtcatgc--aactggactgcagcctcagtttccccccttataaaatgcagacaaaagcctctct-cccatggaggaagtgagaacttaatgagatggtaaatgcaaaaatgcttcccacagAG a score=1760 s mm7.chr15_random 3938315 331 + 7075849 AGTCCTGCAAGCTCTGGAGGCCTGTGGCTAAGAAGGCAGGCCCATTGACCTGCC-------TGGGGGAGATTCTGTGTATAT----CTGAGTTCCCATC--GATACTTCTTG----CCATTAAGTCCCAGGGCCTTTTGAGATTTCAGGA------------------GCTCCTTCATCTGCA-TGGACCCTCAGGGTCGCCCACCTTGAGTCCCAGCCCAGACTTCCATA--TTCAGGGAC--ACTG----CCTTAAGGTGTGGTGTCTGTCACCCAGGTC----CC-------------AGGCTTTGTCCCCTCAGAGCCAGGACCAGGAGAGCTGCATGGT-ATGGCTGATCTTGCTGGGGTCAATTTGAATATTTAAAGTGTTATTTCT s bosTau2.chr5 31475303 384 - 76426644 GGTGCTGTAGGTTCAGAGGAGCCCCTGGTGAGAAAGCGGACGCTTTGA--TGCCTGGACTGTGGGAGGAATTTTTAGTGTTTGATGATGGGTTCCATTCCTGACATTCACTGTGATCCCTTAG--CCCGCCACCCTGAGGGTTTTCAGGACGAGCAGGAGAACTCTCCCCTCTCTCACCTGGATTTGATCCCCA--GTCCCCCACCTCCAGGCC---ACCTGACTTTCCTGGCCTCAGGGACTAGCTGGGGACAGGAAAGGGTGGCGTCCATCTCCCAGGTCAAATCCCGAAAAGATGAGGAGCCCTCCACCCGGCGGGGTCACTGGCAGGTCACTTCCATGATGATTCCATGTGTTGTTTAGGTGGTTTTGTTTCTTCACTTGGTGATTTCT a score=4193 s mm7.chr15_random 3938691 315 + 7075849 CCCAGCCTCCCTGGAGTTAACA-TTTATGTAAC----TGCAGTACAG-GGTGACACATGAGGAGTGGCATACACGGATGTCCTGTACACAGACTGGGCA-GCCAGAGCTGACCTCGGGGGTGCTCCCAGGATCCTCTGGTGGCCTTT-CAAAGCTGCTTCACA-CAGGTCTTTCACTCATCTCTGGTTCCACTCAGGGAATTGGCTCTGCCTCCCGCCGT-------------GGATGTGGAAGGGACGAAAGCATCCTAG-AAACTGCTCCAGGAAGGGCCT--AAACC----TCTCA-------------CTGGTCTCATGCCACAATGGTGCATTTCTAGAGGTGATGGGAACT s bosTau2.chr5 31475720 337 - 76426644 CCCAGCATCCCCACTGATAACATTTTACATAACCATGTGCATTGAAGAAATTACCCTGGGAGGTTTTCACA---GTATGTATCATACCAAGCCTGGGGAGGACAGGATGAACCTCAGGGGAGC-CCCAGATACTTCTTGTGGCCTTTGCGAAGCCACTTCACATTCAGTTTTTTGTTTGTCTCTGACT-------AGGAATTGTTACTGCCCTCTCCCTTCACTCCAGGGCCAGATTGGGGAGCGGACG-------CCCAGCAAACAGGGCCGGACTGAGCCTCGAAATCTAGTTCTCAGTCCCCCCCTGTGCTGTCCCCACATCACACC--TGCGTTTCCAGAGGTGACGGGGCCT a score=15628 s mm7.chr15_random 3939262 482 + 7075849 TTTTCTTTTGCAGAATTCTCCACTCTGGTGGCTGAAAGCTAAGTGGCGCTGACTGCTTGGGTCCCCCACCTCTCCATCCCCAACGCCCC-ATCTCAGTCCTTCTCGCGGCCCTCCTGAGTTTCTGTTCAGTTTGTTTGTGTTATTTTTTACTCCCCCATCCTCTATGGCCCTCGGATGACGCCATTCTTCTGG-AAATGCTGGAGAAACAATAAAGGCTGTACCAATCGGACACCACCTGTAGGGAGGACCCAGGCCTGGCAGGGTGTTGGTTTGGCAAGTTTTTTTTCTTTCTTTTTAGGGCAGTGG--GGGTATAG-TAGAAAAAGTGAGAT--AAGTCAAA-GGACAACGCCCCGATATCTCCTGCCTGCTTGgtactgagtgctcatgtgggccacctcgttcaatctctgcacctttcccacaaggagatgggggtgatggatcgtccatcttaaagatacagaaactgccttttaaagagCAGA s bosTau2.chr5 31478575 451 - 76426644 TTTTCTTTTGCAGAATTTTCCACTCTGGTGGCTGAAAGCTAAGAGGCTCTGACTGCCCAGATCTGGCTCTTCTCTGCCCTGAACGACCCGATCTCAGCCCCTCTCGCTG-CCTCCTGCCTTTCT-----GTTTGTTTATGTTATTTTTTACTCCCCCATTCCCTGTGGCCCTCTCATGACACCAATCTTCTGGAAAATGACAGAGAAACAATAAAAGCTGTACCAATCAGATTCTGCTGCT--GAAGGAGCAAGGTCTGGTAGGGCGTGGATCC------TCTTTTGACTTTCCAGGTGGGGGTGGGGCAGGATATAGACAGAAAAGATGAAATGGAAGTGAAATTTACTGAGACCC----TCCTCTGCCT--TTGGta---------cat---ggcttgcccattc-atcgctgaaaccatccatcaagta------attcatgaaattcccattttacagatgtggaaactaagtcctggagaggaaa a score=2765 s mm7.chr15_random 3948966 88 + 7075849 AGCTGCTAGCTCTCCGCAGCTGCTATGAGATTGCAG---GGACTCAGCAGCTGACAGACCAGCATAGCAGTAGTTCTGATTGTGCAGGCTC s bosTau2.chr5 31484662 91 - 76426644 AGTAGGTAACCATCTGCCACTGGGAGGAGAATGCAGCAGGGAAGCAGCAGCCAAGGGACCAGCGTGGAAGGTGCTCTGATAACGGAGGCCC a score=7824 s mm7.chr15_random 3949077 384 + 7075849 AATGCTCTATCACATTCTGTATTCACCGCAACACCCGCTGTGCTGACTTGGCCGCTCTCCAGCAAGAACCCAGCTCCCCTCTCTTATTGCTCCTGCTTCTCCAGGTCTCAAGCCACTTGTCACTTGTCTCTCtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtAAGACTCACATCTGTGAACTCTCGAGAAAGGAGCAGAGAACGATCAGTTCCACGGATTGCTCTGGAGAGAGTTGCCTAAG-------------------------------GATGAGAAATGTCAATGTCGCTGCTGCCTTGCAAAATCC-------CACGCTGGAGCAGGGGGTCAGCGGCAGAAGGGCTGCTC-CCCAGTTGTCACAAGCCTCCACGCTTTGTCAACAAGGTTAGAGAGA s bosTau2.chr5 31484989 357 - 76426644 AACTTTCTAGCTTTTTCTATATTCACCACGA---------TGCCAATTTGGATGTGCTCCAGTGAGAAG-----TGGCCCCTCTCACCACAACAGCTTCTCCAGGTCCCGGGCCACTTGTCACCCTCTCCTCT------------------------------------------------AAATCTCACATCTGTTAACTCTCAAGAAATGAGCAGAGGGCAATCGGTTAGGCAGAGCACTTCAGAGACAATT--CTGAGATGGTTGTGAGACTTATGGGAGCCAGTGCCAGATGAGAAATTACTTTGCTCCAGCAGTTCTGCAAAATTCAAAGCTTCTTGCTGGAGCAGAGGGTCAGTTATTGAAAGGCTTCTTGCATAATCATCACAAAAGGCC-CGC-TTGTCAGCATCGCcagagaga a score=6742 s mm7.chr15_random 3949556 550 + 7075849 TTTATTTCTGCCCAGAAGGCGTTGCCTCTGGGTCTTACATTCCTGGCAAGGGAAGCTTCCT--GTCTTTGGAGAGTCTTCAGATCATGAACTTACCTGCTTGATTATTCATTGGTTTTGGAACAAGGTGCTCTAGAGTCGTAG---TCACTGGTGGGTGGCACCTGTCTGGAgttta--ctgtgtcaccatgcaaagtgttctctgtg-----catatttaggccgtgcatctc-----ctcagggtgggttctgtgatcaattccgtcttacaccacaggagacagaggctcagcctggtttccaagccctcccagggccgcccagcctgcagctgggagagtgaggCTCGG----GGCAGATGGGAGCACTAACCCCAGTCCTACAGTTTGTCCGCCA------GTCTGATGAGTGTCTCA------------GAACCTCCGTGCCCTCCTCTGGCAAACGGCTGCGCCG----------------AAGGAAGAAGCTCCAACAAGGCCAAGGCCTTGG-------------ACAACTTGGCATCTGCATTTTAGCTTTGCAAGATTC--CAAATGTTTGTTCCTACCAGATCAGATCTGGTGAATTCTAAAATTCTT s bosTau2.chr5 31486482 585 - 76426644 TTTATTTCCATGCAAAGGAAACTGCCTTCATTTCTTTGGTTTCTAGAAAGGAAAGCTTCCTAGGCCCCAGCAGATGGCCAAGGTC---CATTTA---AGTTAATCATTCATTCA-TTAATAACAGCGTATCCTAGagtagtagaaaccactggt-------atttgttgggtgtttattctgtgcctgcat-caaatggtttacagaaattatcctgtttaattctcacagctctctctctcatag--------gtcactagtcccattttacagatgatgaaacggaggctcagctgaggtcttgagctctcccaaggccacctgaccagtaagcagtggagctggatgtggaaacagacgatatgaattctaatcccactctaccttctcattaaccatgtgatgtcagacacgtctttcaaagcatttaactgagcctctgttttctcctctggaaaatggATGCACTGTTAAAGTTTGAGAAAACAGGAAAGAGCTTTGA-AATGTCAGCCCTTTGAGAGAAATCTCCACACGACTTGGTATCTATTCTTCA--TTTCAAATATCCCACAACTGTTTGCTTTTCCCTCTTGAGATCT---------TAAAAATCTT a score=6981 s mm7.chr15_random 3951000 458 + 7075849 CCAGTCCCATT-----CATCCTTGAAGGGCCCTCAGCCCTGTCCTGTGGGCCACCAGAAGGC-------GTCTTTTCAA--GCTGCTGTGTGCTGGCC-ACAAAGGCTCCTTTGTGGTGTTGGTGATAACACTCAAAGTTACCTGGAGGAGGTGCTGGGGAACTGGCCTCAGAATGGAGTCTATCTTGGTGGCAGGGAAAGCTCAGGTTTTTGCCCAGAACTTTATAGTTTGCAATGCATATCGTAGGTGGTAGGAGCTGTCAGGCTGCACCTTCATAGTAGCTATTGGAGAGAGCAAGAGACTTGTGTGTGTG--TGTTCCCCT--GCCCAGCCAAG--AAGTGGCTCCTCCTGTGTGA---CGATCACAGAAAGATTGTGTTCAACAGGGGGACACTTGGGAAAGAAGGATG--------GGGA----------CAGAGCCGAGAGGACT-------GTTACACATTAGAGAAACATCAGTGACTGTGCCAGCTTTGGGGTAGAC s bosTau2.chr5 31487393 472 - 76426644 CCAGCCCCACTGCTTCCATCTGGAAAAGGCCCTTGACTCTGCATT--------CTAAAAGGTATTCCCAGTCTGTTCAAAGGCTGCCAGATGCCAGCCCACAGATGCCACATTCATGTGCTTATGACACGCCCCAAGAATCCTTGGAGCAAGAGATGGAGAACCAGTTTCAGAAAGAAGTCGATCTTGGTAAACCTGACAGCCTTAAACTTTGTCCAGCACTTTACAGCTTGCAAAGCATGCCTGAGGCAACAGGTGGTATCGGTTTTGAGCTTCACAGGAACTCT----------GAGAGGCTGGGGTGAAGAATTGTTCCTTCAAGTCCAGCCACATCAAGTGG--CCTACAGTGGGAGTTAAGTCATGGCCAGAGCATACTCACCAGGGAGCGCCT--GGAGGGCAGGCTGATAGCCCTGGGGGCTACCATCTCACTGCAGGGAGGACTCACTCCACCCATGCATTGGAGAAA-------------GGCAGCCTGGGGGTAGGC a score=20110 s mm7.chr15_random 3952143 1599 + 7075849 GGAAAGGACAAGACACACTGAGCATAAAACATGC---AAGAGCGTGTCTGAGCTTTCACAGATGAGCTGTCAAAGGGCTGTTTaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGCCTCGTGTGACT--GGAGAGCTGATATGCTCTACTTTAAGTAAAAGAAGCCCCAAAGACCAGGAAAAGCCAAGAGCCCTCAGCACCTGCCTGTGGCTGGC-GTTTTCCCCCGGCGACTGCTGCCCCCTGCTGACCAAATCAGCATACGGCAGCCTGCCCAGCAGGCAGGACGCACAGCTATGGGCTCTCTCACTTTGCATTCAGAACACAGGGGAGGTGAGTCAGTCCCACAGCTACTGCTCTTTGTTGAGATGTCCACTGCCAAGCACTGCATCAGCAGAGACACAATCAAGTGGGCCCGCACGGGTGCCAGGCACATAGACCTCAAAGGTCATTGCCAC-AGGAAGCGTCGCACCAGA------TGTGGTGTTTTGCCTTA--AAGCCAATTGTAAAGCAGAGCATGGCTGCAGCCTCAGGCAGCCCCCT--GGGGACCCATCA-CATCCCA--GGCTGTGCATCAGAGCCGGTGT----------TTATGAGTTCTTCTGCTACACATCTATGTTC------TGTCATGGGAACAGGGAGGCCAACAACTGAGCTACTAGGAACCAAGGGACATGGGGGTGGGGGTGGGGAACagagagagagagagagagagagagagagagagagagagagagagagaTTCAGACCTAAGCAGTGTG-GTCCAAAGACCTCAAGATTTCCATTTC-AAATCAGTA-GCCT-----------TTTCTAAGTGagcagtttccatccatgaaagagtttgaccccaaggggacatttggcaatgactggagacatttcattgttgtctacagaggtgtgatgatttgggtagctagtgggt------cagagATAC---------------AAGCTCATAGTGGCTCCCCTTCCCC----CTGCCCATATTAAAGTATCAGCTGTGCCCAGAAGAAACCTGGCTCAGCCTGGCACAGGGTCTCCTTGTGGGGCTGTGTGAAGCTGATGCCAAGCTCTGCTTTACCGGTCCCCATTCACAAGAGCTGCAAAGTCCCTGCCTTCTCTGCT----CAGCACTGGCTCGGACCTGCATGCACCAGTGACTGAGTCTTAGTACCCAGAACTCATTCTTCCTGAGGCC-----CAGTCTAAACTATACGAGGCACGCCTCCCCTAACC---------GTCTCTTTTGTACCCA-----ACCATTTTG------------CTACTACTACCCTGTGTGGGTAAATGGACCCTAAT--GTCATCTAGACAGAGGGAGTAAGGACCTGGAGCTGTTCACAGTGTGATGATGGAGGAACCTAGGCTATGCAGTGGGCCCGAGCAGCCCATGCCTTCTGAACAGAGTGTGGCAGCTGTCACTGCCTGGCTACGTACTGCAGCTC--ATGCATACCGC-TGTCCATGCTGTCAGGAGTCCCATGACCCCAGAACGATCCGAAGGTTCCTGGGAACAACGTGTCAGCAGCTGCCTCTACAACCCACTCTCAAGCAAAGCCTTCTGTGCAAAGAACCCCCTCCCCCCCACACACACACACACGTCAATGTCAGCACCCACAACCCCGCCTCCAACTTT-GGCAGCAGCACTGTTAACCC s bosTau2.chr5 31489650 1490 - 76426644 GGAAATGGGCAGACATGGTAAACGTAGAATGTTCTAGAAAAGCATCTCTAGGCTCCTGCAGATAAGCTACCAT-GAGCTGTT---------------------------AGAGGAAACCTCGGGTGGCTCTGGAAGGATGATTTGCTCAACTCGGAATACTTGCAGGCTTGAAAATTAA-AACAGCAAGG----TTTGGCTCCCTCCTGCAGCAGCCAGCATTTTCCCAGCTGCTACTGCCCCCTGCTGGTCGAATCAGGATATGGCAGTCT-CTGTGCAACTCGGGCTC-CAGCTCAGGGCTC---CACTTTGCATTCCCTGCGCACAGAAGGTGAGTCAGTCACATTTCCTCTGCCCTTTACTGGGGTGGCCACGGCCAAGTACTGCATCAGCGAAGGCATAAACAACCAGGCCCACGTGAACAGTGAAGAACTCAACAGCAAAGGTCATTACCATGAGAAGGCAGTGTACCAGAGGCAGCTATGACACAGTGCATTATGCAAATAATTGTAAAACAGA-CGCCACCGCTGCTTTATAGATCATCCTTGGGGGCTTCACCGCCATCCCAATGGCTGTTAATGAGAG-TGGTGTTCACTGAATCTTAGGACTTGTCAGGCCCCCAGTCTAGATCCTTTACTTGTTATGTG-----------TAACAGCTGATCCTTGTCGCACCCAGAGATGCAGGAATGAG-----------------------------GAAacagagcttaaaaggcaaagaagggttcaaacttacacagtctgagtcccgatccttgcAGATTTCCATTTTAAAATCAATATGCCCTACACATTGAGTTCATACATcagtggtcctcatccatggataattttggcccccagggaacatctggcaatatctagaggcatttgg--gctttcataatgagggagatgattctggcatctagtgggtagaggccagaggtgctgcaaacagtctacaatgcacaggatggcccccacaacccagaaatagccaatgcaaaatgtcaacagtgcggagatgaa---------------------gaaatcctAATCTAAATATGTAAGATTCCTACCAA-------TCCACTGGCCCTCTCTT-------TTGCATTGTC--------CTCTGCCAGGAAGGCATTAGGGAGAATCTGC------------------TTTAATGTACCAAAGGTATTCTTCCTGAGGATTCATGCTGGATAACTCTCAAGAGGCCTTTCCCCACTAATTTCTCTTAAAGCCTCTTATGTCCCCAGCAGGACTGTTTTGCATCCAACAACCCTGCTAATACACTCCACAAGC-ACTGGGCTCTAAGGAGTGGCCCAGGCAGA-GCAGAAACCCCCTGGAACCAC-------------------------------TGCAGTGGGCACGGTCATCCGGGGCACCGTGCGTGGAATACTGCGGCTGATG----CTGGCACTCAGCCGCAGCTCAGATGAACGCTGCTTGTCAGAGCTGTCGGAAAGCATTCAACCCCAGGATGATTGAATGTTCCCTGAGAACAACTTGTCAGTAGCTGCCTCTCCACCTCCTTCTCACCCGAAGTCCT----------AGCTTCCT------------------------AAT-----------CAGCCCAGTCCTTGGTTTTGGGAAGCAGTGCTATTAACTC a score=2138 s mm7.chr15_random 3953914 120 + 7075849 cccttcccaagtgggcatagggccccggattcaagt------cccaata---ccacagacaaTAAAGAATAAATAAAATAAACAATTGGTGCTTGT--------CATATTACCAGAAGAGTAAGCCCTATGAGATTC s bosTau2.chr5 31491258 110 - 76426644 CCCTGTCCAAATGGCCATGGAACCCC---TTCCAACAATAAGCCCATTACCTCCACAGG------------------------AATTGGTGCTTGTTGAACGAATGAATGACCCGAAGGGTAAACCCGAGGAGATTC a score=7021 s mm7.chr15_random 3954199 358 + 7075849 ATTCGTCTCTTCAAAAACACCCCCCCCCCCCGAGTGTCTCGCCgtgctggggactgtcctagaggccaat-gaccaaaagctattgagtgtctcttctcatgaggctaactttcaag----tggagaattctgcaaagc-------------accctggcacatcctttccaccagtggccaaggccaggaagacagtacagtaaagcaagg---tcaagctgccaaatggaaagaaagtctttccattgaatggctagggatggacggctagggacatgccactggggcttc------------gagctgaaagtcatggggaacagagctctgcagccatgctaggaacattacgtgtaaaggccctggggtaggGAAGTTCTCAAGGA s bosTau2.chr5 31491368 378 - 76426644 attcattcattcaaaagta------cttcctaagtatctcaccatgctgggcacgacctgagatgctgggaggacaaaaaagatcacatccctgttctcatgaagcttatcttctagtggatggagactgatacaaggcaaataaataaataaacatggaaaacaataccaggtagtgttgaatgctaagaagaaagcacagtaagacaaggagttgagtctgatagattgggagtaattctttaaaccagccacttgggaaggcctctccaaggagat---agggaggcctttatttgcacaaagagctaaaggtactgag----aaagtcatgcagccatggtgagaacagtcagtgcaaaggccctgaggtaggaagggtcttgggga a score=13252 s mm7.chr15_random 4005420 409 + 7075849 ATCCAGTG--AAACACTACAGCGTACAAAACGTTGACCCTGAAGAGTCAAGAGAACAGGAATCC-TCAGTTATAAGCATGAGCACTCTCACCCCTCGGGGGC--GCTCCTTCCAAGCTTCGAAACCTTACTTTTCTAAGGACAGTTGAACTATC------------AGACTTTGTGCGCACAGAATTCTATCACAACGGTCCGATCCATTTTTGTCTGTTCTATATAGGTCTCCAATTAGAGTCCCATCTCAAGCAAATAGCCATGATAATTTAAATTAATTTTGAGTAGCTTGAAGCTGACAGCCCTAGCATT-AAAATAAATGCTTTTGTTACGGAGGTAATTTATTTACATGGTGCTGTGAGCTGCCACCTCTCTTGGATCCCCTTTAATCCAAACCGTGCAGTCTCAAAAGAGGTGACGTAAT s bosTau2.scaffold4491 50833 411 + 65155 ATCCAGTACCAAATATCTCAGTGAACAGAATGCTGACACAGAGAAGACA------CAGAAGTCTGCCAATCAT---TACAAATACCAATATCCCTCCATGACTGGTATGTGTTAAGGTCTAAAAGCTCATCTT------GAAGATCGACCCATTTTAAGAGGGAGTAGGATTTGTGGACTTGGAGAGCCACCGCAACGGTGCAGTTCACTTTTATCTACCATGCTAAATCCTCCAATTAGTTTCCCATCTCAAGCAAATAGCTGTGATAATTTAAATTAATTTTGAGTAACTTGAAGCTGACAGCCTTAACGTTCCAAATAAATGCTTCTGTCCCTGAGTTAACTTATTGATATGGTGTTAGAATCGACCACCGTTCTTGGATCTCCTTTGAGCTGAGCCATGTATTCTCAGCAG-GGTGACGTCAT a score=2415 s mm7.chr15_random 4005848 69 + 7075849 GTCCAG-ATCCTTCCTTATCCTCCCGCTGGGCCTTTCCCTGCAGCCTCCTGGTTGGGTAGGAGTTTGATG s bosTau2.scaffold4491 17180 70 - 65155 GTCCAGCACCCCTCTGCAGTCTTCTGGGGAGTCTTGTCACACAGCCTCCGGGGTGGATGTGAGCTTGATG a score=5968 s mm7.chr15_random 4005932 108 + 7075849 AAATGGGATTTCACTTCCATGCTGATCATGGAAATTTCCTGGAGAAGGACAGTGTCCCAGAGGCTTCT------------GGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt s bosTau2.scaffold4491 17539 120 - 65155 AAAAGTTATCTCATTTCCTTACTGATCAGGGAAATGTCCTGGGGAAGGTCAGCGTTTCAGAGTGTTCTTGTCTGGGGGAAGGgtgtgtgtgtgtgtgtgtgtgtgcatgcatgtgtgcat a score=52544 s mm7.chr15_random 4006040 1026 + 7075849 gtgtgtgtggtgtTCAAGCTGTATGTTCAACCTGGAAGGAGCTATACTGGAGACTGGCAGGGAGAAGGGAGCTATTTGGTTCCTAAA---------ATGTGCCTGTATT------TGCTC--------------CTTTCTCACCAGGCTGGGTGTTGTAACTCCAAGTCTTTGTTTTTCCTCTTCCTCTTCCAGGTGTGAATGAGCCCAAGCAAGA----CCTGACACCTGCTGAAGAAACAGCCAGATTTCCACGTCATTTGCATGAACCCTGCTGTGAAATGAACCAAGCAAGGACTTGTTAGATACTTCCTCCTTTCCCTTGCTGAGCACTCCCGGGCCG----TTGTTTCAGTGTGGTT-TAATTGT--CCTGTCCTTCTTTTGCCAAGGCAAACACCCCAGCCTCACAGGAGGCATCCCTAGAGCTCATCTGCTGGCCTGAACATGAACATGGGCAGAGCTGATGATTGGGAGCCTTTCCAAGGGACTTGGGTCCCCACGGGGTCCAG---GGGGAAGCAGGACCTCTCATGATGCTGGTGTCTGGGAGTGAGCACCATGCCCATCACCCAGGACAATGCTTTGCTGCACCTGCCCCTCCTGTACGAGTGGCTGCAGAACAGCCTGCGGGAGGGTGGGGACAGTCCCGAGCAGCGGCTCTGCCAGGCGGCCATCCAGAAGCTGCAGGAGTACATCCAACTGAACTTGGCTGTGGAGGAGAACACAGTCCCACCAGAGCACAGCCCCCCAGAGATGGAGATCTGTACGGTGTACCTCACCAAGCAGCTGGGAGACACTGAAACTGTGGGGCTCAGTTTTGGCAACATCCCTGTTTTCGGGGACTATGGAGAAAAGCGTCGAGGGGGTAAGAAGAGGAAAACCCACCAGGGGCCAGTGCTGGACGTGGGCTGCATCTGGGTGACAGAGCTGAGGAAGAACAGCCCAGCGGGGAAGAGCGGGAAAGTTCGGCTCCGGGATGAGATCCTTTCCCTGAACGGACAGCTGATGGTCGGAGTTGATGTCAGTGGGGCCAGGTAAGCAAGGGTTTAGCACCCAACCTGTGAT s bosTau2.scaffold4491 17999 1041 - 65155 gtgtatgtg----------tgcatgtTCACACAGGGTGGAGGGA-ACACAGCAATGGGATGGGGAGGGGCACTG---GGTCCCTGACTCAAAAAGCAAGCACCCTTCTTCCGTAATGCTCTCCTGCCACGTGTTCTATCTGAGAAGGCTCACTGTTGTAAC-CGGAGTTTTTGTTTTT-----TCCCCTCCCAGGTGTGAACGAATCCAGGGGAGGTCACCCTGTCAC-TGCTGGAGGAACA-CCTCATTTCCAGGTCCTCCGCACGAGCCCGACTGGGAAATTAACCAAGCAGGGACTGGTCGGACACTTCCTTCCTTTCCTCATTGA-CGCTCCAGGCCCAGCGATTGTTCCCCTGTTGCTCTGATTGTGAACCGTCCTCCTCTTGCCAAAGCAAACAGCCTGGACTGG-AGGAGGAGTTCCTCAGGCCTGTCTGCCAGCCTGAACATGAACGCAGGCCGAGCAGACGACAGCCCGCGTTCCCCAGGGACGTGGGGCCCTGCGGGGCCTGGCCCTCAGGAGCAGGTCCTCTCATGATGCTGGCGCCTGGGAGTGAGCACCATGCCCATCACCCAGGACAATGCTGGGCTGCACCTGCCCCTCCTCTACCAGTGGCTGCAGAACAGCCTGCGGGAGGGTGGGGATGGCCCAGAGCAGCGCCTCTGCCAGGCGGCCATCCAGAAACTGCAGGAGTACATCAGGCTGAACTTTGCTGTGGACGAGAGCTCCATCCAGCCCGACCGCAGCCCCCCTGGGATGGAGATCTGCACCGTGTACCTCACCAAGGAGCTGGGGGACGCGGAGACTGTGGGCCTTAGTTTTGGGAATATCCCTGTGTTTGGGGACTATGGGGAAAAGCGCAGAGGGGGCAAGAAGAGGAAAACGCACCAGGGCCCTGTGCTGGATGTGGGCTGCATCTGGGTGACGGAGCTGAGGAAGAACAGCCCAGCCGGGAAGAGTGGGAAGGTGCGCCTGCGGGATGAGATCCTCTCCCTTAACGGGCAGCTGATGGTCGGAGTTGATGTCAGTGGCGCCAGGTGAGTGGGGG---AGCA-CCAGCCGGCAGT a score=8814 s mm7.chr15_random 4007287 616 + 7075849 TTGGTTTGTTCTATTATTTTGGGGGGTTGGTTCTGTTTGCTAAGAACACCTATATTCAAAGCATTTCCCTTTCCCT-GAAACTTGGGGTAA-AAAGGAAACAAACACTATGTG---AAACTATAAGAAATGTCCCATTGAACGAG----TCTCTATCAGTCAGCTCAGCATCTCATTGGCAATCAGAAGCCCAAAGCTGTGGTCCTAGGTGTCTTG-------------CATATCAACTTCACCTACAACAGACA---CAGGACTCCC---AGAGACTTCAAG-----TGCAGACACCCACCCTGACATATTTTCTAACC------ACCCACCCTACCACACCCCA--------------------------------CCCCCAACACTGTAGGAAGTTAAGACAGGATAGGTTGGGTTGTTTCCCTGGTGAATCTggcttcccagaaacactatcaa-ttcagagataggccaggtgggctcatagagctcagaaaagct------ctcatggttccag-tttatccctttgaaaagatgaagactgaaaccagccatggggaa-gtctaagagtaaccctgtgccagttttcagttgccacctcgtatcagcagtatacat-ggtactc--------------cgagatg------cctatgtg---------------caggaaagctcacacaaggcgtggtgcccagggtttttat--gggattggtca s bosTau2.scaffold4491 19178 706 - 65155 TTGTTTTGCTTCATTCTCT--------------------CTTAGAAGATTCAGGCTCAGAGTTTGTCCTTTTTTCTCGAAACTTGGGGTAAGAAAGAAAAGAAATAGTACATGATAAGAGGATGAGAAGTATTACATTGAGGGAGACCCTCTTTTCTACTCAACCCAGCATCTTACCTCAAACCGGAAGGCCATAGGTTGGGTCCTGGGTATGTTTTCATCTGCCTGTCCCTATGACCTTTGCCACCAACTCACAATTCAGAAGCCTCTTGAGATGCTTAGAAATGTCTTTAGACCACCACCCTGCCATTTCCTCGTCCTGGGAAGACCCCTTGGATCTCATCTCAATGAACATATTTCTGTTTTCTACCCATGTGGCCACTTACCATGGCAGTAAGTTATGGTTGGAC-TGTTTTGTTGTTTCTTGAGTGAATTATggttcccaagaccaccttcagcttctatgattcactaggagaactcacagaactcagaaaagctattatactcatggttatagttttattacaatgaaaggaatcagattaaaatcaaaggcgcatagcatccaggagagaccaggagcaagcttccagttgtcctctcctggtagagttatgcagaagtactcaattctcccagcagcaatgtgtgaccacatatatggagtactggggaagactgaagagctcacccaagtcttagt-------gtttttattgggggttagtca a score=4504 s mm7.chr15_random 4008354 269 + 7075849 ATGAGAAGCTTAAAT---GGGAGGGCTCTACCATATTtaccttgcccaaaattacccaagtaatagaagacagaactg-----ggatttgaacccaggta------------ggtctagcttcacaatttttcctccttaccacggtgttacaTCTGGAGTTTT------GTAGTCTGGTGTATAATTTCATGAATGGTTTATGGCTGCACAAAACACCTCTTTAGTATAACCACAAACATCAGGGGAAACA-----TAGAACAAGCCAACAAGGCTT---TCTACATAAACCAACAAGGAAA s bosTau2.scaffold4491 21707 288 - 65155 atgagaaccttgaccacagagagggc--------atgtggcttacacaaggccgcctgggaaa---gaggcagaaccaactgtgaacttgagcccagccgccgccacagcctggtctgtgatcttgagccctgttctgaaccacC---TCAAATCTCGGGTCCTTGTCATGCCATCTGGTGCTCAATTTCATGGATGGTTTACAGCTTCACAAAGTACCTCCTCGACATAATCATAGACAAAAGGGCAGTAAGTGACGAGAACAAACT-CTAAGGCTCCTACTTACCCAAATAGACAAGGAAA a score=3478 s mm7.chr15_random 4009494 191 + 7075849 tcctttagtctacagatgcagagccTGAGTGTGTGGAAAGCTATTACTGGCATTTTAAAGAGTTTTTGAGTGTTTTCAAGATTTTTTTCCCCACTCATTGTAACTGACAATTT-------------------CTACTTTGATGTGTGAAGATTTGTTCT-AAGAAGTATTGAGTAGGAACTAATGCTCTACCAAGACACACACATACCTCT s bosTau2.scaffold4491 22060 208 - 65155 TCCTTTGGCAAACTTACATCTAGCCTGAACTTGAGGACTAGAAGCACAAGGAGCTGAAAGTGTTTT-GAACGTTCTCAACATATCCTTTTTCACTCTTTGTAACTAACTGTTTGCTTCAACACTAGATTTTCCCACATACCTATGT-AGGTTTTGTCCTAAAAAAGTGGTGAGTGGGAATTTG-GTTCTGCAGAAACCCCAATGTACCTCT a score=39292 s mm7.chr15_random 4009695 1638 + 7075849 TAATATAAGAAACTCTTT--GGGATAGCTAGTCTACC-----TCTCAAGTTTGCTTCTGAATTCAAAATTGTTTTATGTGAtattataggttgagttgtatccc---cttctccaaactcatatgttgaaatcctaacttcc---------attgcttcagaatacaagcttgttcagaagtaaaaccattgcacatgta----gttaagatgaggtcatactgaagtctgggtgga---taatgcagtgtgattgttgtccttatc--aaaagctaatttgg--actccaaca----cagagggaaaatgacatgtcaagac--aagttatgctgtcacatgccaaagaactaccaggag-------------------------------agaggactgaagcag--ctttgtccacagcaccagggaaacctgg----------------------------------ctctgctaacctcttgatcttatacccctagtctctagagctgtgagattataagtttctgtttcctgagccattcagtttgtggtagtttattacaacacccttagagagctaacacaAGCAGTACGTTGACTTT----------------------------CACCATCTTCTGTGAAA------CTCTGATAACTTTAAAGAACTGTGTGTGTGGGTTTAGGAGGATGCTTCAATGGTTGCCTGTGTG--GAGTGTGGGAGGAACAGGTGCAAAATGTAGATGATGAGGTCATGGTTG-CTTATTTCAGAA--------------------------------TTACACG--------------CACAGCCATGAGTGGGTTTGACAGCCCTCTTGTA----TAGAACCA-------------------------------CACATCCGTAGAACCCAGGTCTGTAGGAGCCTCCTCCACAGCTAGTGCTCTTATGGTCCACAGTGTGCTTC-AGGTGCCCCAAGAAGTT------------------TCTGAGGGATGACAGCTTCTTCCTTCTGTGAACTTCA-GAGAACATTCTGGAAGAATGAAGACTATCAGTCACATGTGATGTCACATTCCCCGCCCCTTAAAGACAAAGCTGGTAATTACATGGCAGAA-GCCTCTGTTTATAAAATTCTTGGCTACC-ATTCTGGAAAAGATGGGATTTTTCAAAATGTTCCGAAATGTTACTTCTGTTTGGTGCAGGAAGAAATGGGGA-AGGTTTTTAGATTAGTTCCTACAAGGAATATTCTGTAACCCTAGTCACCCCC----------------TCCACTAGCTCTCTATAAGTAAACCAGATCTGTTCCCTGGAGACAGATTATTCCAAATTGGTAACAAAATGTGGAATTAATTAAGATGGAGCCCATATACCCCGACAAGAACAAATGGACTTTTCTGAAACGTAAAGAGGCCCACGTTTCGTTTTTAAAATGTTTTTGTTTTCAGAATGTGGGCTT----TGGAAATTTTTATAGGTTAATAAATGTGAACA---TAGCACAGTCCAGAGGACACAGGCCTTCTAAGGAGTCAGGGC-GACTTCCAGA----------AGCCTTGTG----ACTGTTCCCTTGGCATGGGAGGCTGACTCTGTTTTCCTAATAAGAGCTGCTTGGTGGGTGAGAGAAGATGATTTA-TCGACACGGTGACTATGTAGCTGGCACAAGGAAGATACCCAGTCCAGAGGATCTTTTAGCATCTCGCCCATCCAGCCTTGGGCAACCTGAACCCACAGCACAAGTCACAACAGAGAATAGGCCTTTGAGTTGGAACGAAAGAACCTCAAACCCTGC-CAGCTCCTCAGACACAAGAGATGATAGTGACA-------GGACAGTGGTCC--------CCTTTATCCATGGACAGTCCCT s bosTau2.scaffold4491 22401 1901 - 65155 TAATAAGAGGCACACTTTTGGGGCAAGCCATTCTGCCCCTTCTCTTGAGTGTGATGTTGAATTCAGAAATCTCTTAGATGAtgttatgggttgaattatgtgtcatgcccctccagagtcacctgttgaagtcctaccctcctccccacccaggacctgagactgtggctttgtttggaagtagggttgctgcggatgtatttagtgaagatgaggccctatgggaatagggtctgcccctggtccagtatgactagcatccttatataaaaggcagatctggggacacagacatgcacacaaggagaatgccatgtgaaggctggggtcaggctgccacaagacaaggaacgaccagaagttaagaagttctgtagggtctatggggtcacaaagaattgga-cagtacttagtgaacaacaagagagggacctggaacagacatttctcccatactcgagggagtgtagctctgccaacgccttgatcttggactgtcagt-gccagaac---gaaaagacaaatttctgttgcttcggctacttggtttgtggtactttattgtgacgctct-agcaaactaacacaCGTGATATTTTGACCCTGTCACCTGCGGCTGGTCAGTTATTCAAACAATTTCCTCCCTGACAAGGTCACTCTGGAAACTTTACAGCATTGTGGATGTTTTTGGAAGAGGACACTCTGAAAATTGTGTGTGGGTTAAGTGTGGGAGGAGCAGGTGCAAAATGTAGAAGATGAGCTCATGGTTGGCTTATTTTAAAAATTAGCTTAGGGGCAGTTTGGAAAGATCATCCCTGCAGGAAGAGCAGAGAATTCACAGCCATA----GGTCTGACACCCGTCT-GCAGCCCTAGAACCATTTTCAGAGCTTAACCTGAGAGCATCTCAAACTTATCCCCAAACCGCAGACCCCATTCTGCTCTCTCCCTGACTGACACTCCCAAGGTCTGCAGTTTGCTTCCAGGCTCCCCACGTAGCTCTGGGAACCCCTCATGCTTTTGAGTCGTGACAGCATCACGGTGGAGTGAACTTCTTGAGAACTTTCCGAGGTGGGGAGGGGTACCAGTAATGGGTGCTGTCACA--CGCCGCATCTTGCAGGCATGGCTGGTAAACACATGGAGGAAAGCTTTTGTTTGCAA--TTCTATCATACCTACTCCGGGGAAGATGAGGTTTTCTGGAATGTTCTA----TTTATATCTTTTTGGTGAAGGGAGAACTGGGAAGATTTTTTTACATTATTTCCTACAAGGAATACTTTGTAACCCCAGTCCCTCCCCTCCACCATCCCTCCCTCCCCTAGCTTTCTATAAGTAAAGCAGATCTGTTCCCTGAGGACAGATTGTTCCAAATTGGTAACAAGATGTGGAATTAATTAAAATACAACCCACACACCAAAACAAAAACAAGTAGCCTTTTCTGAAAAGTAAGAGGGCCCATGTTCCA--CTGAAAATGTATT--TTTTCAGGGTATCAAACTCAACTGGACTGTTTGGTACATGAGTGAATATGAGCAGGGCAGCACAGTGCAGAGAACACATGGGCCTGGGCGAGGCGGATCTGGCTTCTAGACCCATGTGCTGGCCGTGTGGGCAAATG-ACCTCAGCCACGCAAGGCTGA---TGCTTCCCCCAGCGGGATCGTTTAGTGGGTGAGCTGAGAAGATTTACTTGATGTCCTGAATAGGCCTCTGGCACATGTCA-ATGTTCAGTCAAAGGTAGCTTTTCACATCCTTCCTGGTTGGCCTCAGGCTACCTGGACCCAGGGCAC-AGCCTGAACTAAGAAAAGGCCTTTGAGTTTGAAGGGCAGCATCCGTGTGCATGCttagtcgctcggtc-------gtgtcagcaacgcccccatggattgtagccccccaggctcctctgtccatggggattctcc a score=36895 s mm7.chr15_random 4011558 1311 + 7075849 TAGCTTCAATGGTCTGGGTGCTGGCCACTTAAGTCAAAGACA---------CATACAGGCATAGGGTCTTAAG-TGCTCCAGCCACGATAGTGCCAATGTGTTCCTGGAGTATGAGGAGTCTGTACGATCCCAGAAGAAAATCT----CACTGGGCAGATA-TAGGCCAGACATACTCAAGGTGACTGGCCAAATGGCACAGAGACACGCCATGCAATAAAGAGTAGCTGAGTATCAGCCCTAGCCAGCAGCAGCCTTCAATCC----CCTCTGCCTCCAAATCATGTGTAAAAATAAATTTAGGGTTGGTACAATCTTAGA--CTGGTTACCCATGGCAACCTTGAGTTCTGTCTGGATTAAAGCAGA-TTTAGGCAGAGTGTCAAGAGGGTATGAGAAGGTGTTACTTGGAGAAATGACTGCAGGTGGTGATGTAGTAGGAGACAGAGAGAAAGGAAGATTCTCCAATTATAGCTTTATAATATGGTCCCTGGGGCCGCTTAGCACAGGG----TCTTGTCTCCCTGCATGTGTGCCCAGAGGCACCTAGTACTCCATGCAAGACTATATATATAGTCTATAGG---------TGGTGACCTAGAGATATTAACGAAAGGTTAAATTTTACTCAGCATGCTCTCTAAG------------------------------AAGATTTCCATTGCAGAAAGTTAAAAGGAAAACAAATTTCAGCATTTACAATTCAATTATCTGGAAAATTGGCCACGTGGAACAGCCCATTCCCCTAAGGATGTAGGCTGAAAGAAACAGCCCATGA--CCCACATG-GTACCCAGCTCCATTCTTTTCAGCCTGCTGCCTTCTCGTGCAAGTTCTTTTCATGGCTTGGTTTCTGGAATCTCTTCCAG--CTCATTCAAGTCCTACTTTC---TGGTATCACGGAAGAAACTAAGACTCGGGGGAGTTCTTTCCTGAGGTCATCTATCTTCCCAGAGATCAAGTTT--ATGCCTTTGACTCAGAGTCAATAACTTTTTTTTTTCAAACCCATAAATAATAACAAATGGCATTGGA------------TAGTTTTCTATATCCTGTAGTTTGTGATCAAA-ACAAATAGAAAGTTAAGTTTCTCTACAT-TTCATAC-----------AAAAGCAGGG--GTCACACCCTAAAAACCTCCCGTCT---CATAGGTGTAGCTTGTAGCAACTTGGTGACAAGAGTCATTGCT-GCTGTTGGAAAGAAGCACGGAGCTTGCTTTCCCTAGATTTCTAAGTGCCACCAGGCCAAGGCAGTGGAGAATCTGAGAGCCGTCGTCTGCCATCTTGTGGTTGAAATCAAGCACTGTGAGA-GAGTGTGCTGGAGCTGTCTGTCCCCCAGCTGGGTGTGCTTCACAGCTGTGCTCTT s bosTau2.scaffold4491 24521 1368 - 65155 TACCTGTAATGGCGTGGGTATCAGCC-----TGTAGGAAACAATGCTGGTGCCTGCAGGAAAGGGTGCTGGAGCCGCTCAGGGCCAGACCGCACCTTTGAGTTACTGGGGTGTGAGATACATACATGGTCCATGGAGAGGGGCCAGGGTACTGGGCTGGCAGGAGGACCCAGGAGCTTAGGGACATTGGCCAACTAA-GGAGAATTACTCC-TGGGCT---GACTAGCTGGATGTCAGCCCTGGACAGAGGTAACCTTCAGCTCAGTACCACTGCCTTTAAATTGTGTGTAAAATTAAATTTAGGGTTGTTACAAGCTCAGATTCTGGTTACCCATGGCAACCCTGAGTTCTCCCTAGGTTATAGCAGATTTTAAACAGAGTGTCAGGAGGCTGCTAGAAGGTGTTACTTGGAGAAATGACTGCAGGTAGTGAT---GTAGGAGACTGC-AGGAAGGAAGAATTGCCAATTATAGCTTTATAATGTAGTCTCTGGGGCCATTACACACAAGGGTCCTCCTGCCTACCTGAA--TATGCCCATAGGCACCCAGTGCTCTATTGGAGACTGTATGTATAGTA-AGAGGTAGTCATCCTGATGACCTAGA-ACATTCAGGAAAGGTTAAATTATA-TTAGTTTGCTGTTTAAGGAGCCAGAGAAGCGTGTAATACACTTCTGAGAGATTTCCATTACGGAAGGTTAAAAGGAAAACAAGTTTCAGCATTTAAAATTCAATTATCTGGAAACTTCATCAAGTGGAACAGCCCGTT-CCCGAAGGATGCAGTGTCCATGGAGCATTGCAAGGGTCTTGCATTCGTGCCCA-CTTCTTTCTTCTCTGCCTGCTTGCCCCACGTGCTGTTTCATTTCATGTCATGCTTTctggaaggcagcccagatttcatctgagtcctgttttctcatagtaccacgcaggaaactaaggttctgggaggaggtttcctggggtcaagag------caaggaccagaattcagggcctctgactcaaattctagaac--tttttcttcaacact----ATAGTAACCAATGAAATTAGATTTCCTTTTTTTTTTTTTTTTGCACTTTATTGTTGGTTGTAAGATACAAATTGAAAATCACATTTTCCTGCATATTTCTACATCCATTCTCTAAACGGATGGTAGTTACATCT--AGAACCTTCCTTCTCAACAAGAGTTTAACTCTTAGCAGCTTCATCA-GTGTGTAAGTGATGGCCATTGG--------ACTGGGCTTTCCCTCC--GGTCTTCCACACGTTTTCTGGGCAAGGCTGTGGACCATCCTCT-GCCATCGCCTGCCACCTTGTGGTTGAAATCAAGCACGGCACTAGGAGCTTTAAGAAGCT---TATTATTAGGCTGTGCGAGTTTCTCAGCTGCGCCATT a score=2507 s mm7.chr15_random 4013486 66 + 7075849 CCCAGCCCTGGGTCCACTTGCTTTTGGGACGGAAGAGATGATATGAGATGGGAGACTTTCTCTGAT s bosTau2.scaffold4491 26560 62 - 65155 CCCCTCCCTGGGTC----TGTTCTTGTGAGGGGAGAGATTACATTAAAAGAGCCACTTTCTATGAT a score=10472 s mm7.chr15_random 4013788 589 + 7075849 GCAGCGCACCATGCAGATGTGCTTCCT---TTCCTTCCAACCACCTGCTTCGC-TGATACCTGACTTGGAACTGAATGCCGGTGCGGCCATACACTCCCACCCAGGAAGA-GGAAACCCCCAATGCCTCACTTCAGATACCCACTTCTAAACTGTTAGAAGTACTTCTAGGAATTGCTGTCACTAGGAAGCATAAGGAG-----------GGAGGCATCT-GGCGTGATTAAAGTACTACT-GTCTGACTTCATACCCTCCCCCGT--GGGCATTTCTGAGTCTTTTGCAGGAAGGCTGACTTCTGCTTCACCTTTCTTACTTGAGTATTGAACGCGTT-TGAGCATTTCTGTTCTCTCATGTTTGGGTACTAAATGTCCCCAAGTGATTTTCAATTTTTCTTTCACAAGAGGGTCTTTGAAATCCAAGCTTTGGTGCCTGGATTACCTCTTACCCTCTCTTAGAGACTTCTGAAGGGAGGCAAGACACCTCACAGCCTGGCTT----------------------------TCACAGAAATAGAAAGCC--AAGGCTCTATCTTTCCTTGTTCACTTTGTG-TAGCT-----TTGAGAAGGGCCAGTAT----TGTAAGGACCCAT-----------------GTGTATA-------CAATTTAAACTACAAC s bosTau2.scaffold4491 26640 652 - 65155 GCAGAGCTCCATTCAGAGATGCTCTTTAACTTCAGCCCAGTAACCTGGTTCTCCTGGTAGCCCCATCAGAGCTGC-TACTGGGGGACTGATTCA-----ACCATGGGAGATGGAAAACCCAAGTATTCTACTTGAGACACTCACTTTGAAACTCTTAGCTGTACTTGTGAGAATCATTGTAACTGTAAACCAGAAAGAGAAAGAAACGCTGGGAGCATCTCAGTGTGATCATAGTGCTACCAGCCTGACTTCGTATCCTTCTCTTTCTGGACACTCTGGGGCCATTTTCAAGAATTTTGACTCCTACTTCA--TTTTATGTCCAGATATTAAATAAGTGATAAATATTTTTATTCTCTCAT-TTTGAGCACCAGATGCCCCCAAGAGGTTTTC--TTTTTCT-------AAAGGTGATTG---TCCAAGCTTCAGCACCTGTTTCGGCCCTTGTC-TCTCTTTGGTCTTCTGGAATGGAGACAGATGACCACATGGCCTGGCTTAGATGTCCCTAATTAACCTGTTTGCCAAGCCCAGAGGTTCAAAGGCTTGAATCCCTGTGTTTTGGGGTCCACCTAGTGGTTGCTGCCTTCTTGTAGGGGACAACATCTGATATCAGGACACATACGCGTGTGTATGTGCAGTGTATGTTTTTTGCAATTTATAATAAAAc a score=896 s mm7.chr15_random 4014410 49 + 7075849 agaatt----tgggaggcagaag----taggtgaatccctgattttgagaacagcct s bosTau2.scaffold4491 27322 57 - 65155 agaatcctcctgcaatgcaggagaccctggctcaatccctgggttggaaagatgccc a score=8618 s mm7.chr15_random 4014592 587 + 7075849 ATAAAACAAAACATATGTTAT--ATAGTTACATGGAT-TTTGAATGTGA----------TCTTCCTCCAAAGATTTTGACTATGCGAGTTTGACTTATGTTACTTAAATATTTAAAAAAACAAACAAACAAAAACCATGACTACTGGTGACTTTTTGGGTGGC----CCTAATACTGTTGAAAATAATGGAG-------------TGTGGGGAAGTGGGGTT-------CTCCAAGACTCAGATGAATAG--TCAAGGCCTGCCGTGATGGCCTAATCCTCC-----ATCTCCCCTAACAGGGGGATCGTGGTCTTTCCTTTGCATCATCTCCAGAACTTAAACTTTTTTCTCCCCCCCCCATCCCCCTTTGAGGAGGG--GAAGGAGATGAAGGAGGCTGAGCTCTTTCCACGGCTTGGGTAACCGTTCAGTCAGCCCTTCCTTGAGCTGGGTATGA-GGTTAGACAGGATGAAAGGAATCGATATTTATTAGAAAAGCCTTGGCCTTTGCCAACACAGGTGTCTACTCACAAAAGCTCTGAAAGGACAGCTG-------TGAGGGAGCAGATGGGAAAGAGATATCCCTAAAGACTCAA--CCCATATAAAACCAATCTCTGTCAAACCTGAGGGCGAGTC s bosTau2.scaffold4491 27615 616 - 65155 ACAGCACAAAACATGAGTTTTCAAAAGCTACGTATATGTCTTCATGAGACTCTTCTTTGTCTTTCTCCAAAGATTTTGAGAGTATGAGTT-AAGTGATGCTGTTTAAA-----------ATAAACGATGTGGAGATGTCACTGTTAATGGTGTTTTGGATGACAGGGCTTTCCAGTGTTGAAATGGACAGAGCAACACCCAAAGGTGTGAGTATCTGGGTCTTTTGTACCTCTGGGTCACAGACAGCTAGAGGCAGGGGTGTCAGCAATAGTCTGATTAGCTGGCTTATCCCACCCAA-AAAAGAATGAT--TCTATCATTTATAACATCTCTTGGACTTAAATTTAGCCTTTCCAGCCAGGTC-----TGGGGGATGGCAGAGGGAGATG--GTGGGCTAGGCTCTTTCCTAAGCTGAAGTGTGTGTTTGCTGTGCCCTT---TAAGCTGGACTTGAAGGCTAGTCCATTTAAATGGGGCTAGGATTTATTAAGAAACTTTTGACCTTTGGGGTCACAGATGTATTTTCACAAATGTCCCTGAAGGAGGTCTGAACTATTTTCAGGGGAAGA--GGAAGTAGGTGTCTTTAAAAACTCAAGCTCCATTAAGTACAGGTCTCTGTCAAACTGCATGGCAAGTC a score=6632 s mm7.chr15_random 4072558 324 + 7075849 TCATCCTTT------GTGTATCTGATTTTTAAAGA------TGACATAATTACATAGATAAAGTAAAGCTATCCCATTGTTTTACAAGGAAA------CGTAGTAAATGTTTTGTCCTTGGGATTAGCCTCCCCCCATTTCTCTTA-----TACAGCTTGCCACGTGGGTTCTGA--AAGTCAGTTGAACTGAGAGGCGTCTCTTCTGCCGCTGGAAAGTGTCTGACCCACTGCTGCACAGTTATGATTGTAATCCTTGTTATTAATATGGATTCATTGGTTTGAAAACTGAAGTTCTTAGGTAGAGAACAATCAATCAAAAAGAAAGAagatagatgatagatggtag s bosTau2.scaffold300 506125 331 - 555214 TCATCCTTTTCATATGTGTGTCTGATTTTTGGAAAATGAATTGAAGCGATTATCCAGATAATTTAAAGTCATCTCTTTGCTTTATGCACAAATAACACCAAAACAAATCCTCTGGTATTAGAA--------CCCCTATTCCTCTTAATGTCTGTAAATTGTCAGGCAGGTACAGATGGGGCTTATTGAACTAGGACCTATATCTTCTGTATCTGAAGGGTGTCTGACATATTGATTCCCAGTCACACTTGGCATTGTTAATAAGAATATAAATTCATTAGTTTCACA--TGA--TTCCTGGGTAGA-----ATCCATTAAAA-GAAAGTGAATAGTTCACATTTTCTAT a score=6518 s mm7.chr15_random 4073051 409 + 7075849 ttgatagCAAATAGATTTCATAGTAATAAATACTAGAAAATGCAGTTGATTGTTCAGTAC-----------AGATAAAAATACCCAAGAATGTAAGTCACTGT-TTAATGTGGAGATAGTGCCAATCATTTCATTGTGCTAAACATTTCAGCATGATAAAATTGTTC-AATTGGCAAAGCATAAGGAATTTAAAGTAAATAAAAATAACATTTTCATTAGTCATTAATTTTCA-TTAATCACATTCTAAGCCTTAGAACATGAATCAAAAGCATGG--------------------------CTATAT-TTTGAATACTA-------TATAAGCTATCTTTGTAGACAATACAAAATAAAGCAAAGAAAACCATTTTTAGTTTGTAGATTTACCCTCCATAAAGTAATGCT--TATGG-TACAAAGTCTGTAAGACCTATTTATTATGAAG---AGAATTTCT s bosTau2.scaffold300 506631 430 - 555214 TAAAGATTAAATAggttgtagaaaaat--------gtgaatatacttaatgcttctgaactgcatactttcaaaaaAAGACACACAAAAA----AATCATAATCTTGACATAGAGCATGTTTCAATCATTTCA--------AATATTTTATTATGATAAAATAGTTTTACTTAGCAAAGCattaa-aatttaaa-taaaaagaagtaatattttaattaGTGAAAAATTCAAAAGGAATGATATCCTAAACTTTAGAATATAAATTTAAAGCATAAAATTTAGAATGAGAATCTAAGCATCATTATATATTTGAGTACTACAAATATTATAAACCATATAGATGGACAATAATAAGAAAAATAAAGCAAG------TTATTTTATAGGGCTGTATTATATAAAAGAATGCTATCATAGACATGAAATCCTAAAGAAC-----ATTATAAAGTTTAAATTTTCT a score=13979 s mm7.chr15_random 4073650 678 + 7075849 GCCCTCTTGCATGCTTAACTATGGCTCATCTCTCATTTGTTGCTCGAAAAATTAGAATCTTGTGCTGTCTAAGAGATAAAACTCATCAATGAGAAGAATGGTTTCTGAGGCATCAGAGTGTCAGGAGTGAGGTTCTAGGA-GTCTGTCCTTACCTGGCCTGCATGGAGGGAAGGTCGGGACATCAGTGAATGACGAGGACCTCAGACGCGTTTGAGACAAAGTTGCCACTAAAAGCAGATTGCAAATGCAGGTCACTAAGGAAGTGGGCCTTTTGTCTAGTCTGAC---TGCGATTCTGTTGTTTGGAGAAAAAAATTCAGATCTCCAATTTAAACAAAAACATTTTTTCCCTTATTTTTATCAATCAAAACAGAGACTGACTCTGG---GAATTATAAATTAACCTTATTttcattcaactcagtaaatattccttgaatgttgactgtgtattagacattctgttaggcacAAA-ATGCCACCTGTAAACTCGTAGTGGGTGGAGATCGATGTAC--ATAAATTGCAGCTTTGCAAAGCCCAAAGGCTGTTAAACACATTAGGCAGAGAAGCACTGGGGTATGTTGATGCCCAGATGGGCAAACTGTGTTCTCAACTGGCTCAGAAAACAATATGTAATAAAGTTCTTA----AACTGCC---------AGCATGCTTTTATTTTTGTAGATGCTTACT s bosTau2.scaffold300 507181 655 - 555214 GCATCCATGCATACTTTGCTAAGACCCCTATTTTATTTGCCACT-AAAATGTCAATGTTTTACAGTAGCTGAAAAAGAAAGCCTATCATGAATGAGAATGGATCTTGAAAAGTCAGAGTGTCAGACTTGAGGTTCTAAGAAGTTCTTTATTATCTGGCCCAGAAGGAGGGAAGGCTGGGAGGTCCGTGAAGGATGACAATGTTAGTCACTTCTGGGACAAGGATGATGCTAAAAACAGATTGCAAACTGAAGTCAATAGGG---------TTTTGTTTATCTTTTCATTTGGATTTTTGCTGTTTTG-GAAAATTTTCTTTGTCATCAGTTTAGAAAAA----TCTTTGC----ATCTTTATTGATTAAAA-ATAGTGTGCCTCTGGTGAGGATGATA------------------TCAGTTTAGTAAATATT---TGCATGCTCATCATGTATGAGACCCTCTGTCAGGCATGAAGAtgacctcaaggagctctcagtgga-ggagacagacatgcgtataaacaGCTGCATGGCAAGA---AGAGGGCCTGTGATCCATCATAAAAGGAGTCACCAGAATGC-TTGGAGTGTAGAGAGGCAAATTGAGTTACTGATTTATTCAAAACACAGCATATGATAAAGCTCTTAGAAAAAGTGTCTTTTTAAAAGGCAGACATATGTTTAAGGAGAGGCTTACT a score=7108 s mm7.chr15_random 4074328 392 + 7075849 CTTCAATGGCCA-------------------------------------------GTTGGAAAGCt---------------------------------------------------------------------------------tttttttaaaaa---------------------aataatttCACATTCAGTATA--------------------ATAGTCACAGCTATACCTACCTCCTTGAGACTGAGGATCTGTAGTATGAAGCGTAACAGATGAAGACCTTACACGCTTTCTCAAGAAACCAGTGAATTCTGAAAGAAATTTCATAGGAATGGTAACATTGCTTAAAATAACA--------------CACAGTACAGTAGG------ATAATCAACCCTTACGTGCTTAGGTCAGTGTTTTACAACGTGCTGACTCTTGAAGCCCAGAATTAAATAGTAGCGATGTTAA---GGTGATTATAGGCCGACAAGTGTCTCATATTAGCATGGAACAGGTAGAAATGAGT--CTTCTGCAGGAAAGTATTCAT--ATTCTAAAGTGCTGCAGGAAAT s bosTau2.scaffold300 507966 584 - 555214 ctacgataaccattgttaacactgtggcttatgtccttttggttttttttccaatgttgataagttaaattttaaatcataactcactgtattctatagactgctgttttcacataacaatatattagaaacaccatccaatggatatatttttaaacattaCCTGTCTGAAAATTTCCTAGTAGTATCACACTCAGAGTACACATAGCAGTGAACACTCAACAGCCCAGACTATACCTACCTCCTTGGTTCTGAGAATCTGTAGTATGCCAAGTAAAAGATGAAGCCCGGACACGCTTTCTTGAAAACTCATTGCATTCTGTAAGAAATTCAATGTGAAGGGTAAAATTGATTGCAATAACAAATTAGTTTCAATCCATGATATGAGAGGAGAAATATAATTTCCTTTTCTCTAGATATATCATTGTTTGACAATATGTTAATGCCTGAAACTCAGTTTTAAATATTGGGGTTAATAGCTTGGTCATTATAAACTGACAGGCATATCATCCTGCTGTGAAACAGTTAGAAACAAGTTGCTTTGACAAAAAATTACATATAAATTCTGAAATTGTATAGAGAAT a score=8588 s mm7.chr15_random 4074743 447 + 7075849 TACTGTTCTCCGGTCTCTGCCTGCCATCTTTC-----------------------------AAAAACCAGGAAAACCATTAAGTATCATAGAGCCTGTGCCACAAGTCCAAATGCCTGTGCTTGCttttttttttttttttttttAATAAAGTTTGGGGTCAGTGTTGTGCAAATTAGAACGTATTTCATTACCAGGCTCTGCCGTTTCTTCCAGGCTGTCTTCTGCAGGTCTCTGAAAAGACATGAAACTCCCAGTGAAAGTGGAATATTTTCTGTTTTTGCATCAATTTTCCACCCTGTTTCTGTATTGAGAGAATTTTCAGGAGCCAGAGCTTTTCAGCTCACAAGGACAAAGCAACACACCATAGTTTCACCAAGAACATGTCAACAGAGAAGTCTAGCCCAGTGGTCACAGATTTCAACGACTATGGAATCATTTCTAAGTGGTTGTTTTAATGCAGATTTTTATTTATTT s bosTau2.scaffold300 508609 370 - 555214 TAATATTCTCAGGGACCTATATGTCATCTTTCAAAACAAAAGCCAGTCTATCTGTGTGCTTAAAAACAAGAAAAATGATTAGATTTGATATAGTCTGTGCCACATGCCAAAATGTTTTTGCCTACTTGTTTCTTGAT---------AAAAAGATTG--------CTTTTGAAATATAGGATACAAGTCATTACCACGTTCTGCTGCTTCATATAGGATGTCATCTGCAGGTCTCTGGAAGGAAACAAAGCTGCCAATGAGAGCTGAGTGTTTGCTATTTTCAAATCACATTTCCACCCTGTCACTTCA-TAAGAGAGTTCTCAAAAGCAAGGTCTTTTCAGCTAGGCTAGGAAAAGCGGC-----------TCACTAAG-------------------------------------------------------------------GGTTG----------GGTTTTTCTTTAGTT a score=14144 s mm7.chr15_random 4075374 504 + 7075849 CAACATCACATAGATTCTTTAAG---TCCTTCAAACCAGTATCAAAACTGCATGCTGGAGCT--TTTTATACCCAGTTTTAGGCTCTTTCGGTAATGAGGAACAA-AGGAAGTCTTTACCATCCTAATCTTTTTCTGCCCCCCTCCCCCCCCATCTTTTAAAGACACTCTAAATAAGCATATTTCTTTAG-ATAGAGCACTTTACTCACAAC-------------------CTACAGAGTTCAACCAAACTGCTGTCCCTGAATCCAAGCTACATGAACATT-----------------CTGTGGGGAACTAGACAAACTCATGCAGC--TACTATATCTTAGTATAAACACCTCCTTAGAGGA-----TTATTTATCAGAACCAAAA---------------TATCCTGATCTTACCTTAAAATTGTGTTCTCCTTTCTCAAAAACAAATATTGGCTGAGCAATGACATATTTTTCTGTAAAAG-AAAAGAATAGTCAAGAAATCAA--AGCACACTGATGTCTCCAATGCCACCTAAAAATACTTCAAGAAAGGTTTTTTTTTTTTTTTT s bosTau2.scaffold300 509095 556 - 555214 AAAAAGCAAATGGAGTCCTTAAGATTTCTTTTGAATCATTAT------TGCAGTTTTGAACTTATTTTATATCCA-TTTTAAGCTAGGTCAATGGTCAGGACCCATCATGAGCCCTAACTCTTCTAATCTCTTTCAGTCCCTCCCCCTTCCC---------AGTCACTCCAAAAAAACAGATAATTTTGGTAAATATTATGTTATCCATAGTTTCAGGATAAGGTCTCTGGCTTCCCATTTCAGCCAAATTGCTACTAGTAAATCCCTACTATGTAAATATTCTCAGTTACAACTCTTGCTATGTGAAAAAGAATAAATTTATGCAGCATTGATATAATTTAGTACAGCTAGCTTCTCAAAATACAGTCTTCTTTGTCAAAGTAAAAATCAAACAAAGAAAAGTAACTTGACCTTACCTTAAAAGTTTGTTCTCTCTTTTCAAAAACAAATATTGGTTGAGCAATGACAGATTTTTCTGTAAAAGAAAAAGAACATGCAAGAAATCAAACAACACACCGACATTTCTAACACCAACTAAAAATACTTGAAGATATTTTGGTTTTGTATTTTT a score=4290 s mm7.chr15_random 4128077 110 + 7075849 AAAATGCTGCTGAAAATACCATATTAAAACATTAC-------TGAGTTTATCCAACTGCTGCATGT--TTCTGAGAGTTCTGTGGGTACTTTGGGCTCAACACAAGTCAAAGAACTGTT s bosTau2.scaffold300 495642 118 - 555214 AAAATGCTATTGAAAA-ACTATATTAAAATATCATGACCAATTGAGCTTACTTAACCATTGCATATAATTCTAGGATTTCCTTGGTTTCCTTTGATTTAATGCAAATCAAAGAAGTATT a score=28429 s mm7.chr15_random 4128414 1194 + 7075849 CTCTATGGGTTTCATATCTATTATTCAAACAGATGGGACATGCTTCCCA--AAGCCTTTTACAGTTAAAGA-----ACTTGTGACTTTTAACCCAGCA-CTAAGAAGTG------ACTTGAACTGAATGCTAATTAATTTGCCTTCAGAGATGTAACAACAGTTCCTC-TAAGGTAAT--------TTATCAAAAGCTTACCAAAACTCTTTCTACCATGTTTTCTCCAAAAACGAAGTCAGAACTGCAGCTTGTAAAAGAACACTTATCTTCCTTTGGTTGGCATCTACAGAAAAGAAAAAAAAAAGTGTTTGGTATCTTAAATTT-------GTGGATGGAGCCACTTTCAGCTTTAGCTGGTAAAATAATTAGGTGGCTTAATATGTTTTTATAGAACA---------CTGC-----TTTGTGCAGATGAAATGGATGAGAAGCGAGAGGGAAAACGTGAGCTAAGGACTCCCAAGGGTAATATTCAGAAGATTGTTGCTGACTGTTACAAGATTGGAGTTGACCTGTGTGGATGATCTCATTCACTACGTGGGCTGCATGCTCAGCTAGAGGGCTGCCCGGCCCTTATCTGGTTATACTC--------CAGAC------ATCTCTA----TCATTAGTCTTTATCCCAAGTGGCCAATGATGCTGCTAGCACTCCAAGCTCTTAAGGGTCTTATCAA------------------TTATTCTTGAGTGTGCATTGCCTTAGT----TCTTCTCCTCCAAGaaattttatttttatattaaaaaataattGTTCTGCACGACGAACAAAACCAA--ACATGTAGCCCTCTCTTGGTAGGTAGATGCACGAACGGTTCTCAGTGCATCCCTCTGACCTCATAGTTCTT-----------TACCTGGATTCAGCGTACTCATGTGAGTCAGCATTTGTCCACAGCCAGTTTGTGTC--CTTTCAGGCAAAACTTTCCAGTCATCAACAGTGATACTAACTAACGTGAACTTCTCACTCAACACATGCGCCCTGCTTTCCTC-TTATCTGCACAACTAATGCCAATTAATCATAGCCAGCACCACAGCTGATTAGAAAGAGGGAGAAAGGACGTCAAGGAAAAAAGGAAGGGAGATTAA-----TAGCAAGATAACTTGTACC----------ATAAGTTTGGCCATATCTTTTTGAAATATTCTGACCCAAGTCCATGAGGTAATGAAGGCTATACAATATTATACTAATGATAATGAAGTAGCTGAGGTATTCTGAAGAGCTTTCTAAACTAAAGTTCTTATAAAAt s bosTau2.scaffold300 495806 1243 - 555214 CTCTGTGGGCT-CTTGTCTATTATTCTAACAACTAGAACTTGCTTCCCAGGAGAATCTCTCCAGTTAAAGATAGGAAAATGTGCCTTTGAACTCAGTAGTTAAAAAGTATGCTCCAGTTTAACATTGTTTTAATTAATTTGCCTTTAGAAGTG-----ACAGCTCTTTATATAGTAATAGAAACATTTGCCAAAATCTTACCAAAACTCTTTCTACCATGTTTTCTCCAAAAACGAAATCAGAACTGCAGCTTTTCATAGAATATTTATCTTCACTTGGTTGACATCTATGGAAAAG----AAATAAGCATTTGCTATTTTAAATGTAGTAGCAATGGATATAGCCATATTAAACCTTA----GTGAAATGATCAGATGATTTAATAGATTTATGTAAAGCATAAAAACATCTGCTAACTTTTGTTTATCTGAAGTTAATGAGAAAT--GAAGAAAAAGATGAAATAGGTACTTCTGATGATGAAAGTCAAAATAT--CTGACAGCTGTTACAACACTGGCCAAGACCAGTGCAGA-----------------GAGGCTGTGTGATCAGCCGGGGAGCTGCCCAGTCATTATCT--TTGTGCTTTTTCAGCGCTGACTCTCTGGTCTCCAGTCTCCACTCTCCTTTTCCCCAACTGGCCA---GTGCTTTTAGCCATGCAAGGTC-TAAGGGCAACAGCAAAGCCAATCTCTTTTCTCGTTACACTTGAGTGTGCAGTGGTTTAGTTTAATTTTTACCTTCCAGAAACTTGA-----ATGTTTAAAG-----TGTTTTGCATAGCG-ACAAACTCAAAGACATGCAGCCCTCTGTTGGCAG--ACATGCTTCAG-GATCCCTACTGCA-CCCACAGCATGCACAGTAGGTAAGTGCTGAGGTACCTGTATGGGCTCCGGTCATGAGA-CCAGTA--TGTCCACAGCTAGTTGCATTCCTCTCTCAGATCAAACATGCCC-CCATCACTGGCAATGCTAATAAATATTCACTT-TCACTTTGCATATTTCTACTGCTTTCTTTGTTGTCTGTCCGATTTATGTTAATACATTAT----AATGCCAGAAATAATTTAAAAGAGGGAAAGAGAGAATACCAGGGAAGAGGAGGAAAGGCTAATTGAGTAGCCAGATATTTAATGCCTAATTAAATAAAAAGTTTAGCTCTACCTAATTTAAACATTCTTACCCAAGTCAATGAAACAGTAGGGACAATCCAATACCAGGATGATAATATACAAATATTAGAGACATTTTTAAAAGCATTTTAAACTTGTATT-TTATAAAAT a score=3188 s mm7.chr15_random 4130212 104 + 7075849 AATGTTGTTAACTTATTCATACGATATCAGAAAATTACAGTATATGGAGAGTTGAAGTGGTCAAAGAAAACAAAAAGGTAAAGGAAACATTTTGGTTTTCTCAT s bosTau2.scaffold300 497064 95 - 555214 AATCTTAGCAATTTGTCTGTACAATGTCAGAAAATTATTTTCCATAAATAATTTTATTGACGAAAGAAAATGAAA---------GAACATTTCCGTTTTCTCGT a score=12744 s mm7.chr15_random 4130685 994 + 7075849 GATCAGTAGACAGCTGGATTGAGCTTCTGGCATTTGGTAAATTTTCACTTAGTAAACTAGAGGAACTTCCAACTTCAGAAATCTGGAAAAAGGAAAAAGAAAAAAAG--AATGAAGAAACCCATCTGACTTAGACTTGCT-----------CATTAGAC---------------------------------------------------TTGCTATGT---------------------------------------------------CTACAGCCACACGTGTTAATCG---------------------------------------------TTTCCTGTGTCCAGATACACGCC--AGCCCTTCCTGCACCTCATCCCACGTGCTCCTC---ACAGGTCTGTGCGCTCCGTACTTCCGCTGCCCACAGTTTACATGCGAGCCGACTGACAGACCTTAGAGAGCTCA--------TCCAAATCATACACCCAAGCG-GAAATGAAACT-AAGTACAAGTCTTTCTGATCCCAGAGACTACATTCTTCTTATACCCACAAAGCACA-------TGGATA-------TATTCTATCCACTGGGCTTAATTATTATTTCTGGATCAGTAGAATTACTTTTTAGGACTATTTAATCTCTGAAAATATCCTAAGAACTCCA-------------CTAGTGTAAGAGGAAACTCCGTCCATCTCTTCATCCTGACATTTTCCATGGGTAACTGAGCCAGCTGAAGCTGGTTTTGAGCATCTACATAAGGTGCATAGTCTATATTAATACCATAAATGTGGGGAAGAGGGATTTTAGAGTTGGAGTAAGTCTAGCTATAAAAAACTCATCTGGTCCAATATTTACTGTGCTTTTGGACATCTCTCTTCCCCTGGTAGGGATTTGAAAATTTGTTCTGGGGGTGAGTTCATGTTTTCAAAGTCAGGTGGGTTCTGTTTCCACTTGAATTTTTATACCAATCAATAAAAGTATTAAT--GTTTCCCTCTTATAATGGGATCCCAAAAGCTGACAAAAGTCTA-CAAGAGAGCATGTGT-------------------------ATGCTGATAACCTTGTTACTAAAACAAATTTCCCTTCAGTCTAAATGATAGACTT-TATTCTTC--GTTGGGTAAAGAAGTTTA--AGGTATGTTTGACTTGATAATAAATGGAGATTG--------CAGAATGTAAG s bosTau2.scaffold300 497198 1174 - 555214 GATTAGTAGACAGCTGGATTGAAATTCTGGCATTTGGTAAGTTTTCACTTAGCAAATAGGAG----TTCC--CCTCATAAATCTG----------AAAGAAAAAAAGTCCATCAAAAAGTTCATTTAAACT-GCCTTACTATATATAAGAGCATTAGACAAGGAAACACTAGCTATAGTTAAattctgtaggcaagaatcctggagtgggttgccattttcttctccaggggatcttcccatcccagggattgaacccagctctcctgcactgcaggcagatgctttaacctctgagccaccaggaaagccttAGCTATAGTTAAATGAATAGAAACcttactatgttcaagtacagtcctaaacatattctatacactatctcatatactcctcaaaacaactctctacactttgtacttctattatccacactt--caggtgagcagactga-----cctaataagcttaaataatggtcagaactgggcaatcagaagagggctgacattcaaacatcggtctgcctaaaaccaaggattg---tgcactAGCATTCAGAAATCCCACCTTCTTTTGTTACTTTTACCTTTTTAGGCAGCGGACTTAAATCTCATTTCTAGACTAGTAAATATGTGTTTCAGGACTATTTAGCCCATGGAAAC-CCCTAAGAGCTTCACCATTATTGCCACCCAATGTGAGGGGAAATTCCT----TCTCTTCCTCTAGAAACTTTT-----GTGATCTAATCAGTCATTCCATCTGCTGTGTATATACAT-ATGCACCTTATCTGCATTAATG-TGTAAATGAAGGAGTGTGCAGTTTTAGAAGTGGAAGGAACCCAG-----------TTATCTGATGTGGTGTCCTCAATGATTGTGGACATATCCCTTCCTCCACCAGGAATTTTCAAAGATGTTGCAAGGACG----CCTAGTCTTTAAATAGGGT------TGTTTCCACTTTAA-TTTTATATCAATCAAAAATAATTTTGAGTAGTTTTCCATATATAACAGAAT-TTGAGAGCTGAGAAATGTGTGTCAAGAGAGTATGTGTCATCGGTTAGCAACGAGCAAAGTACATGCTTATGACTCAGTCACTCAGATGATTTATCTGTCAACCAAAATGGTAGTTTTAAACTCTTTAGGTTGCTTGGAATAGTTTATTAGGAATTTGTTATCT-ACAACAAGTAACCACTGATTAATGACAGAATGAAAG a score=6166 s mm7.chr15_random 4133525 345 + 7075849 ATTTATCAAGTTTTGATATGTG--TCAATAAAGAATATAAG---------TCTATAAA-TTCACTTTAGAATAATTTTCACAGTATCTACAAATTACATCCACTTAGTCAAGCTGGAGTTATAGAATTTCATTTCATTG--TGTCTCTGACGTTCCAAAGACCATCATAAAACAGA--AAAGTCAGTAATAGGCATATCCAGCTGGGCTTCTCATCTAGCTGGGAT-ATCCCTATTCATTAGACCTT---TAAATTAT----GAAGAAATATTTGCAAACCAGAG-CTGGAG----CCTTTCTGTTTTATAATTTAGGCAGAAAA---AAGTGATA-AATAATAAAttgcagtcttgagattctgaattc-agtgccca s bosTau2.scaffold300 498375 374 - 555214 ATTGCTCTAATTTTGATGTACAAATTTAAAAGGAACATAAAAATAAGGATTCTATAAACTTTACCTGAAGATCATTTTCACTGTATCTATACATTATATT-ATTGTGTCAGAATTCTGACATAGTGTCTTATA-CATAGCTTACCTTTAGATCTTCAAAAATCATTATTAAACAGAGAAAATTCAATGATGGGCATATCCAATTAGACTTTTCACCAATTAGGAATAAATTCTATTCAT---GCCCTAAATAAGTTATTTGAAAATAAATTTTTGCAAATGATAGTCTAGTAATTTCTCTTATGTTTTATTATTGAGGAAGAAAATACAAGaaatatattaataaattttattttaaaaCCATGGAATGCAAGATCTTA a score=4958 s mm7.chr15_random 4134089 243 + 7075849 AAAAGTCATGGCAAGGAACAAATATCATTATACTTTGGATGTAATAACATAAT-AAAATCTTGGCCTAT-ACTTACACCATACATCATTCCAAAGT---GTT--GTGTAAAATTTCAAAAA-------------------TTTCCTTACAAAACTTAAGACTAATTTAACACCTTACTCTCCAGTATTCCTAAATAGATAAA---------------AGTAATTACAAAATTATAGTTGATAATTTTTAGTAATATACTAATCTAAAATT----AAGATTGTGTTTTA s bosTau2.scaffold300 498749 283 - 555214 AAAAATCATGCCAAGGAATAAATATTAATCAGCTTTTGATATAATGTGTAAGTAAAAATTTTCATCTGTAATTTATAGAACATGCTATTCCAAAATCAAATTCAATATAACATTTCAGAAATTAGTCAACACATCATAGTTTTTCTTATACACTTTAAAACAAATTAAACAACATGCATCAC----TTTTAAAATAGGtaaataatttatataatatggtgattattatact-taaatgaaaatatttaataatatactgatttgacatttttaaatattttaattta a score=16720 s mm7.chr15_random 4134364 1090 + 7075849 attgattaaattattattaaaaatCACAATGGACCTCACAAAAATCCTATCTTACAAAGAAGAGGGCTTGGAAGCATAACAATTTTGGAAACTGCTAAACACGTTCAAATCCCTTGTTTTCACTGACGG----TAGAGTACTGGGTGCCTGGTTTGGTTAAGT-------GTAGGTAGTTTCTGTGCAAGACTGATTTCCAGTCTGCTTTCTTCTTTAAT-------CAAAATGGCTGATTATACTTCACTTCCATTTCT--------TACTGTCACTGTGTTCAG----GGAAAGCCAG-------TTGAACAACCTCAAGTGATT-----GAAGACAAATGGCTGACGGAATAACTCAAATTCCCACC-ACCTAAGCTGTGTCCCATTCCTCCTGAGTACC----------ACAGCTAGAGCTGCAGCTGCAGAACCTTCTGGAGCCCCACATCTGCATGCC--CCACACAAAGGCTCTCGCCTTAGGAGAGCTTGCAGTCAGGGATTCAGACCTTCCGGTGTTCAGAAGCGAGAC--GTCTCTG-----GAAGCTGTTAAATTCCCCTACTCCACCCTCTGCACCCTGTGTATGTAATTTTTGCTGCTGTTATCCATGAAGATGTGTC------------TAGTGTGAACTAAGCTGACAAAGCTTGCTCCACTCTGATGTTGGACAGCTGGGGATGCAGAACA--------CCCTACCCATTATTTGACTACAGG-TTCCGCCCGTGCCCATCTCACTGCCCCCCTCCCCCAGCGTTTTATACTGTCATCATTCTGGCAGTCCTACTACACTCA-TGAGTTCCCACTGCC----TGCCGCACAGTTTTTCCA-CTTGGGAGTGAC----------AGCAACTACGAAATCTGGTCCGGGGAGCACTCTCTCATTTCCTAAGATTACCAAGAACATTTCACTGTTGCTTCTGTCACCGGGGATTTTTCTTACCTCGTGCTCGGCCTTTTCCTTAGTTTTGTAGGATTTCAATGCACCGGGCCCAAATGTTGTGCCTGCTTTCTGACAACTCTGAGTTTGAGACGGCTGCAGAACAGCGGGTCTTAGAACCTGTTCAGAAGATCTCATGGGGGGTCCTTGAGAGAGCATAATGAAAAGACCAATAAATTGTTAATGAAATGCTCCTTTGTCCCTATTTTTAAATAAT s bosTau2.scaffold300 500608 1145 - 555214 ATAGGTGAAATGATTTTTAAAATTCACAATGAGTCTCATGAAA-TCATAGCTTACAAATAAAAAGAACTGGAAATATAAAAATGTTGGCAAATGCTGACCAGAttcaactccctcactt-cacagatgaaaaacagaaggttgggagctttgtctaagaatgtaaacacagtagatagtggtagaggtagaattagtacTGATCTGATTTTTT--TCAATGACTTGACTAAATGATTGGTATTTTAACACTTCAGCTTAAAATGAGAACACTGTTCTCATGTTCAGTCCAGGAAAACAAAACCAAACTTGATCAGCCCTCAATAGTTTAGCTGGAAACAACTGACTGGTGGAATAATTCAAATTCCAACCTATCTATCTGGCATCCCCTTCCTCTCAAGTATCTACTTCTGGAAGACACAGAACTATAGCAACAGAATATCCCCATACCCT-TATCTGTATGGTGTTAGTAAAATGAGTGTCTCCTTGGAAAGGCCCACGAGGAGTGATTCAGAT------------GGAAGAGAAATTGGTTTCTGTCTCAGGAGCTTCCCAATCCCTCTCGGTTACACTGTG------GAGAAAGT--TCCTTGCTTTTGATATCCATGAAGATGGGCTGGAGTGGATCCATGCTGTGATCTAAACTGGCAAGGCC----ACACCAGCATGTCTACCAGTTGAGGATACAAAAAAAAAAAAATTCTTTTCCTTTTTCTGATTTCTGACTTCTGGCCCTGCC-ACCTCAGAGACCAC-------AAGACTTGCTCCTGGGAACAGCCCTCCAATT-TAGTACAGTCACTGAGGGCTCTTGGCTATCTTGTCTAGCTTTTTTTCCAGCCTGTTAGCTGCTTCAGCATCGGGTAGCCCCAAATTCTGGATGTGGGGACCCACAACAATTTATCAAAAGAAGGATGGGAAATTGA-GATCAGTCCTACCATAGGAGGTTTT-CTTACCTTACTTTTGTTTTTTTCTTTAACCTTACAGGATTCCAACACATGGTCTCCAAATGATTTTCTCACTTTTATATACCCTTGAGCTTGAGGTGGCTGCAAAATAGCAGGTCTTAGAACAAGCTCAGAATGTTTCACAGGA---CCTTAAAAGAACAGAATTAAAGGGTCAATATATCTTTAGTAAAATAAT-TTTCCTCTCAATTTCTTACTAAT a score=2802 s mm7.chr15_random 4135492 61 + 7075849 ACCAAAGTCAGTGCAGTCCGTCAATTGCCCGCTGCTCACTTTTTGCCTAGCTTTTTGCCAA s bosTau2.scaffold300 502082 61 - 555214 ATCAAAGTCAAAATAGCCAGTGAGTTGCCTACTACTGTCTTGCTGCCTAGCTTTTACCCAA a score=3663 s mm7.chr15_random 4135565 135 + 7075849 TTAGATCATGTGGCTTGTCTAACCAAATATGTTTATCCTTCATGTTCTGTCACTCTGTCCTGTCTATATACACCCAACACCACACACACACACACAGAGGTGGGGGAGAAAGAGACATTAAGATATGTATGGTAA s bosTau2.scaffold300 502293 99 - 555214 tttgatcatgggaCTTTGCTTACTAAATACATT---CCTTCATGTTTTGTCACTCAACCCT--------------ACCACCATGCACGCACATAC-------------------ACAGTAAGACATGGATGGTAA a score=25311 s mm7.chr15_random 4237845 964 + 7075849 CACAAACaaaaaaaat----aataaatttaaaCTTTTCATGACAAAATTATAGCTAATTTCATGAACATATTTTG---TACATTGTC---------------ATTAGTTAAAATTTTAAATTGAATAATCTGTAGTTTTTCTTTTCACTTTTTTAGTCTTGCTAAGGAAAACATCACAAAAAAAGTTTTAGCTATAAGCTGGCCCTACTGAAAAACAACCTGTGATGTCTTTATTGTGTAAAGATTTCCTTAACTGAAATTTTA-TAGTGTCTTAGAA-ATATAGGATTTTCTATTAAAAATTAGACTTGGGAGAACCAATCCATTTCACATTGGCCACCAAACAAACATTAATTTAAGCCCCGTCTTGGCTCTATTCGCTTCTGTCTTTCATTTTATTTCG---TTTGAAAGTCACATC-ATTTTGTCATTATATTTTCTTTTCTTGTTCCAATTTTAGTTAATATTTCCCCACTGGCTACTTT-AGATTTTGTTTATGGAACTTTATCATTGTTAGCTAGCTATTCTTCTTTCTTTCTTTACTTT-------TATCACAATGGTTTCATCTAATTTTAACTAAAATTTCAGGATATGATTGGAGCAAAACAA----------------------AATATAACAACATAGAGATATTT------------TTATATGTTCTGTTATTACTATTTATCTTTTCTAAGAAAGATTCCACTGAGAATGCATTCTGTTGGGAAAGCAATTCTGAAGAATGTCAGCTATTCATGAAGtaaatttaaatatattaattttaCTTCTGACAATAAGATGACAAGAGTACTAAATCATGTTGTATCAGCAAAAAA-CTACAGAAATGTAAAAAATAATGCAAATAACACACATTATTAATTAATATCTGCTATTCTTATACCAAAGCAAA---ATTTTGAAGCCTTTGAGTAACTTTATCTAAGAATGAAATTAATTATATCACTCTGTGG---ACTACTGGCTCCTATATTATTAAGTCAGTATTAGTTAAAAATATACAAGCCTGG s bosTau2.scaffold9271 6107 977 - 28863 CACAATCATAAAATAAGTCAAAAATATTTAAACGTT--GTGGTCAAAC-ATGATAAATTTCATTAATAGGTTTTGATGTATGTAGTTTAACCTAGAGCTGAGAACAATGAAAATTATCAAATAAA--ATCTAGAATTTTA----------TTCTAGCCTTGT-----AAAATATTTTCCAAGAAGTCTT---CATAA--CTGTTTCAGTGGAAAACATCATGTGAAATCTTTAATGTGTAAAGGTTTCTTTAACTCACATTTTAACCTTGTCTTGGAATATAGATGATTTTTTATTAAATGTTAGACT-GAGAAAATCAATCCATTTCACATGAGCCATCAAGTAGTTATTAAATTGAAACCTATCT-----------------GTTTTTCATTTTATTCTGATGTCTTAAAGTGACATTTCTTTTATCCATTTATTTCCTTTTCTTTTAGCAATTTTAGTTAATATTTCCCCCCTGACTACTTTTAGCTTCTGTCTTTGGAACTTTATCATTGTTACCACACTATTCTTCTTTTTGTCTTTATTTCAGCTAAGTTTTAGAATTGTTT--------TTGAACTTATATTCCAAATAATGCTTGGAGAAAAAGAATAATACTACAGTACTACACTACAATACAACAAAGCAAAAATATATCTCAATAAAGATTTCTATGGTCCAGCAATAGTATTCATCTTTTCAAAACAACATTCTGTTGAGAACTCCTTCTCTTGAGGGAGCAATTCTAAAGAATTTCTGCTATT----------GTTCCAATATTTTATTTTTTAGCAAGA-AATAAGGCTACAAAAAGCCCAAATCAACTTGCATCAGCAAACAATCTACTGTGATGTGTAAAACACGGCAAACCAGACAGTTTCTTACCTAAAACTTTCTGTT-TAATAGTAAAGTAAACCCATATTTAAATATCTGAATATTTTTATCTAAGCATAGAAAAAATTATAGCATTTTGAGAAACATGACTTTTTCCTCT-TTATTAAACAAATATTAATCTAAAAGGAACAAGTACGG a score=48156 s mm7.chr15_random 4240079 1578 + 7075849 GTTCTGTA----GAATTGTTTGAATACTAATAAAAGCCACATTCCTCATGTATTTGTGATGACAAATGCTAAGTG---GTGGGGTTCCAAGAAT-CCTCACAGAGGTA-AATCTGTCACTGTCTCTATAATGTTAAGGCCCAGTCTCACATTTTATGGCCTCATATTTGCCAGCAAACTCGTCATTCTGTTTTCACCATCATGCCTTAGATGACAAGCGAAATAAACAACATGAAA-TGATCTTTATGTCTAAAACTAACGAAAAGGTGTTAATTAAATAAGGTTG---ATTTAGAAGTATGATCTTTATGGAGAAA------GTTCAAATCTTTATTACCCTTTAGAAAT-CATTCTGAGAAT---GAAAGCAAGAAGGGTTAGCCAATGAATTTCTCCACTGAGAAATATTTTAaaaatacagtttagaaatatgaaatcaaaattcatccaaggtcacgcaagtcgttgctgtagctaagacaaggatgttgatgtcttggctctcagctccatttcttctctctacAGTAGAGTGCATTTCAGTTTGCCATTTATCTGCCAAGAAAATGTATTAGTTAATAAGTGCTTAGAAGCTGACTTCCTGGAAAACATCACGGGATGCCTTTCTTGTGTACACTTATGTTTAATTCAAATCTCAGACTGCCCTTGGAATGCAAATGAGTGTGTTCCTCTCAGGTTAAGTGGTAACAATGTGACAGAGAATAATTTAAAATGTAAGCAGTTTTATTAGTCATTATACAGAATGCAGAACTCAGATATAATCTTGTGGGTTTTTAACATTTTATCTTTTTTTTTTTGTAAAGTAGAAAAATGGCTTGGCTTTTTGAAGATCATTGAGCACAATGAGTTATAATT--AATGTGAAGGATATTAATTCTACTTACTTTCACCGAGCTTGCC-------CACCAACATGTGTATCCACACTACAAAACTGTGACTCAGTTTCCCTCTTTGAAT-CATGAATAG---AAAA------TATTACAAAAATAAATTAACATAATCTCCAACAG---GTCTAGAGCATGCAATG--TTCCATTCATGTTTGGATTTTCTGGTATTTGAATATAAAGTAGCATAGGCTTTATTCAAGAATTAAAAACATAAA-AGTTGTTCTTTAAAAGAACCCCAAAATGCCACCGTTATTTTTTTTTCAGGCAGAACTAGTCCTAAATTCCCCCGTATATGTATAATTACACACAGTTATAGAAAGCATATTATTCACATTTGAAACTCTT-------TGACAAAATACTTAAAAAAAATCTTCAGAGATGTTAGGGAATACATTTAATGATTGCTCAGCAGAAGTTTTCCTTGGGGAATATTTAATCATTAAAGCTTCTCAAATATTTCATTATCATTTCATGCAGTTCCCTGAATAATCCTGTCCCTTGTTAATTCAATAATTTATGCTGAGGCTGATCTTATCAACT-ATGTCCCCAGACATTTTTTAACTAAGCAGATATACCATTAGTGGTGGACTTGATTTGGACATTTTTAACATTTCTGTATTTT--CCTATTGTTTATTAGCAATGTTGCAATACTATA--TCCTGCAGGAAACATTTCAACTGGGTAAACCAGAAGATATAAGTTGGA s bosTau2.scaffold9271 9213 1558 - 28863 GTTCTGTGTGCCAGATCATTGAAATGCTAACAAAATCCACGGTCTTCACACATCTGTTATGAAAAATGCTGGGTATCCATGGGAT---AAGAAGGCTTTATGGAAGGACAATCTG-CAGTGTGTCCATG-TGATAAGA---------ATGTTCTTTATGCTTATGTCT----------------------------CATTATTCCATTGGAGATAAGGAAAAGGAATGAAGCAAAAATGATTTCTG-GTTTGAAGACAGTCCAAGGGGGTTGATTAACTAAGGTGGGGAAACTAGGAGGATTGCCATCTTTGAAAGAAGGGCTGTTACAATAATCATTTTATTAAAAAAGTATATtttaagtctctaaatagctatataagttgtctcatcaattccctcatattgaa---tagaaaaaatatgacccagaaatatgaaataacgacttctccaaggtcaggcaagttattgtg-----tcagattaggatgcagaa----tagccctcagttcagtttctttccactgacacgcAGTATATTTTAGTTTACGATTTATCTGCCAAGGAAACATATTAGCTAATAAGTGCTTAGAAGCTAACTTCCTGGAAAACATCATGGGATGCCTTTCTTATGTACACTTATGTTTAATTCAAATTGCAAACTGCCCTTGGAATGTAAATGAGTGTGTTCTTCTCAGGTTAAATGGTAACACTGTGACAGAGAATAATTTAAGATGTAAGCAGTTTTATTAGTTATTATGCACAGTGTAGAAGAGAGATACAATCTTGTGGA-TATTAACATTTTATCTTTCTCT-------AAGTGGAAAAATGCCTTTTCATTCTagggatcatatggcataatgaaacatacctagagtttggagtcaattaattataccttggctcagc---cttgtcttgggtacacaagctcacacacacattctattccactgagcctcagtttcctttctgcaacgtatgaataagttaaaagagtgttattatgaaaattaaacaagatagctcctaagagaatgtctagagcataatatgcatttattaaatgttagttttaACCAATATTAGAATATAAGATGACAT--GCAACATGC---ATTTTAATTCACAAATGGTTGCTCTTTGCAAGAACCTTAAAATGCCACCTATG---TCTTTTCAGGCATAACTACTTTCATAGTTTCGCTTAAAGATACTGTTACATGCCTTTTTAGAAATGTGATTATTCACATTTGAATCACCGGGAGGAATGataaaaaataaataaataaatCTAGGAGATGTAAGAGTATAC-TTTAATGACTGTTCAGC---AGTTTTCCTTGGGGGAAATTTCATCATTAAACTTTCCCAGGTATTTTATTATCATCTCATGCAATTCTCTGGATAACCATATCCCTTGTTAATCCACTAATTTATTTTGAGGCTGGTCCTACTGACTCATGTCCCCAGATGTCTTTTACCTGAGTAGAAATACAGTCAATTACAGAGTTCCTCTTTAC-CTTTTGACATTTCTATTTTTTTACCTA-CGCTGAATATTAACATTGAAAGTGTATATGTTATGTAGATAGCATTTTAACTGAGTGAAAAATTAGACATTTGTTAAA a score=5027 s mm7.chr15_random 4259296 245 + 7075849 TTTTATTCAAAGGGAAATTCCTGGGTTCA---GGATTTGCATGAATTAAAACTACTAT---TTTGCCAGGAAAATCATCACACATAGAAATTTTGACATTTTGCCTTGTACTTAATTTACAGTGGATTGCTGGTATCTAAGCC-------------GTCTTTCATACTGAGATATCATTTTTACATGACATATTTTATTTCCCATCAAAACAAAGGCAATTCT------GTATTTTACATTTATTTTCTTTCATTACATGGCACAAACCA s bosTau2.scaffold6942 25095 268 - 41832 TTGTATTAGAAGTGTGGCTTCTAAGTTGAATTGGCTTTGTTTTAACAGTGACTTTTGCACCTCTGTCAGCAAAATCATTGCCTTTAGAAATTTGCTCATTCTGCCCTATGTGGGCTCTACAATGGATTACTAATGTCTGAACAGGTAGCTGCAAAGGTGCTAATTACTTGGATATTGATTCTCCATGAGATATTTTAGTTCCCACTGAAGTCGAG--AATCCTCCCCCCCTTTTTTTCCCCAAATTTGTCTCATTACACAACAGACACCA a score=10406 s mm7.chr15_random 4262257 681 + 7075849 TGCCTCTAATATCCTTCTTGT-CCAAAACTTTCTGAGCA--TTTTCTCTAGTGGCCCATCTT---TGTAAAATTGGCTGTCTGCTTGATGATAATATTTCACTGCCATCAACTGACAGCAGATGCCCCACATGATTTACTTTACTCTGTTGATATTTCAATTATTCTAGTAAGGATTAGTTCCCCTATGAAACAAGAAATTATGCCAAAATATTAGTTCTGCATTTCTCTTTCATTTCTTAAGCAACCATCAAAGTATCTACAAACTGAATAATTATGAATTCATCTCATGGGACAGCATTCTCTAAGCT----------------AAGTAAATGGC--TAGAGTCTGAAAATTCTTGGGAAAAACACTGCCACAAACACAGGATTTCTTCGTAAGTAAAAGCCAACAGTAGTGGAGA--GGTATCCAAAGCTAGGGGATCAG----GGATAAATATA-----AACTTGGGTAAACCACAGGAAATTGTTAACCACAGATG-----------GTTTTCAAT--------------------------------TTTTTGAACAACACACTTATACACTTCATTGAACTTTAATACATGAATATCCTGTGGTGGAAGGGTAACCTTCATCAAA-----CTTGCTTGTATACAGGAAATTTAAAGATGTC-----GCAGGTACTGACACTTGAATTTATACTTGTTTCTTCATTTTTCCAAGTCT-----------ATCTGGTGTTTCTAACTGAACCCTTGGTAAATTAGAATATTGTGTT s bosTau2.chrX 36160073 765 + 48857030 TGTCCCCAATATCCTACTAGTTCCCAAATTATCTAAGATATTTTTCTGTAGTTGGCGATTTTATCTGCAAAATTGGCTGGCTCCTCACTCATAACACTTAGCCACCTTCCTCTGACAACAGATGTCCTAACTGTTTTCCCTCAGTTTGCCAATATTGCACTTTGCCTAGGGAGGCCTTATGGCCCTGTGAAGAGAGGAATTTTAACAAAGTGTCATCTCTGCATTGTTCTTTAGTTTTTGAGTGGGCCAGCAAATCATCTGCATGTTGCATGATTATCCCTCTA-CTAGTGGCATGAATTTCTCTACATTTTCCTGTAAATGATAAGAGAAAATAGTGGGAGAGTCCTAAAACATTTGAGGAATCCTTTGCCATAAATGCTGTACTCTTTTTTAAGCAAACACACATAAGAATATAGATCGGTAT-----GCTAGAGGAACAGAGAAGGAGAAACAAAACCAGAATGCAGATCAACTACAAAGAAAAAAC-ACTGCAGATGCAGGTATGAAAGTCATGAgtgagaacagtgggaggcttagggactacaggaattaatggacaacaggtttacttacttctctaagatcttgcacaaaatgatttagtggttaaa----catcttcctaaaatttcccttccttctttactataagtatgggagtattacagggcaagTA-TCATGTTCATCTTTTTTATTGTCTCCCCTTTTCTCTAATTCTTTTATAACAAGTTTTATTCCTTCTAACTGACCTCTCAACAA---GGAATATTGTTTT a score=3295 s mm7.chr15_random 4263621 66 + 7075849 ACTAGCACCTGTCTATTTTATGCCTCTAATGACTTCAAGTGCTTTTGGAATACAGTACATTAGAAA s bosTau2.scaffold7470 28038 66 - 38447 ATTAACACCTAAGTGTTTTATCCATCTAACCACTTCAAGTATTTTGGGAATGTATTGCACTAGAAA a score=20918 s mm7.chr15_random 4263726 488 + 7075849 ATTCAGTGGATTTGCACATTTCCACATCTGAAATGAAACTA-AAATTGAAATATAATATGAAAGAATAAAAGGCATGAAAA-TTATGTAATTGCTGTAAAGGGAGAATTATCATCAGAATATTAATTGCTATGCATTACAAAAC-ATACTTTGAAGATACTGAGTGCATTTTTCCATCAAACTGGAAAATTATTTCATCCCAGCATAACTACAATATAAGCTTAAATATAGTTATAGCTAAAACATCATTTTGCACAACATTAAGCTTGCAAATGCTTTTTAAAATTTTTGATGCTTCTGTATTTTT-AAACAACCATGATACAATTAATTTCTACTCTACAAATAGACAGCTAATAACCATAGGCAAAGCATTCAGTCCATCACACAGCTAATGTAGAAATAGAGAACAAAATATATAAGACATGTAA-AAGTTTGAGTGATGGTAAACCATTCACATTTGCATGTGAATA-ATGAAAAATGAAATATGAATC s bosTau2.scaffold7470 28217 483 - 38447 aTTCAGTGGTTTTGCATGCTCCCACATGTGAAATAAGACTGTAAGTAGAAATATAG-ATGAAAGAA-----ACCATAAAAAGTTATGTAATTGCTATAAAGGAAAA----TTGTCAGAATAATAATTCATACACATTAGAAAATGATACTTAGAGGATAGTTAGTGCATTTTTCCATCAAACTGAAAAATTGATCTATTTGAGCATAAAGACAACATAGGCTTAAATATAGTTTTAGCAAATAGATCATTTTTCACAGTATTAAGC-CAAAAACACTTTCAAGGATTCTTAATGCTGCAGTACTTTTAAAACAACTGTGATGCAATTAATTTCTACTGTGCATATAGGCAACCAACAACCATAGAAGCAACATTCAGGCAGTTATAAACCAAATACAGAAAGTGTGAACAAAGTAAGTTAGAATTGAAAGAAACTGGGGTAAAGGAAAATCATTCTGGTTTACATGTAAATATATAAAGACTGAACTGTGACTC a score=12589 s mm7.chr15_random 4264793 886 + 7075849 AAAATGTCCAATTTGTCTTTACAATAATTAAATTTGTGTTCATTTAAATAATCAAGAGTACACTTTCAAATATTGAAGAGTAAGCATCATACATTGTTTTAAATGCTCAATGTTTTTCTTTAAA-----TTCAATTTACAATTTCAAGTATCCATGCCTT-----------CAAATCTTGAAATG-----------ATGTGATATATC--AACAAACCATGACATTTTTATGCCACTGTGAAGTTAATGACTTGTTATGAGTAGTAAAGCCCGGT-----ATATTTGAAGTTGTCAAATGCTGCTGTTAAGATG-GATTTGTTATTAGGCACATTGGAGCATTAACTTGATTCAGTTTCCCTTATCA---CCTATTAATGAATTGGATTTCCTCAAGAAACATGGTCTGTAGAAAGCTACTAAGTCTTATAAAA---TGTCCTTACTTATGGTTTTACTCATAGACACTTGACTTTATTCTATCAATGCAACCTTCTA--TGTTTGGGGTACTACTGGTTGGTTTCCTCCCCAACCTCCACTTTTGTTCT----------------------CCTTTTGGTGCTTAGA-----AAACTCTTTTCTTTTTTAATATTAATGCCCTGATTCTAGTCACATGCCCTGCAATGACTAATCACACAGAA----ATTTTGTAATATATTTTTTCAAAAATATAAGACATATACACATATAAGTT-------ATCTGGGCTATAATTGAGGTACATAATGCA--GCAAGCCTAGAAAACCACAGCGAGTGAGTTAGTTAGATTCCTAAA---------GAATATTCAGAATTTGTAAT-----CTTCGAACCTCAGAAGAGATTTGTAGATCTATATAAGCTAATGATTATTAATCAGGTTATTATACTAGACATAATGCATAGTGGATGATTGTCACCATCAAAGAAAGCTTCAGTAAAGAAAACTGTATGAAACACTGATTGGCTAAA s bosTau2.scaffold7470 29723 896 - 38447 AAACTGTTTTGTTTTTATTTTCCTTAATTAGGTTTTGTTTTCTTAAAATGATCAAGAACATATTTTCAGATATTTTAGAATGAATGCTACA---GGTTTTAG------AATTTTACTACTTAAAAGAATGTGAATTCAGTGTTTCAGTGGTCTATACATTTTCCCACTACataaatttttgaatatatatatatatatataataaCTCTGAACAAATTAAGGATTCTTTGTGCTTTTTTGAAGTGGGTGGTTTCTCATGA----CAAAGCCTAGTGGGAAATGGTTCAAATTGTGGAAAGCTGCTTCTCTGGTATGTTTTGTTACAGGGCACATTGGATCATTTGCTTGGCTCTATCTTTTTGGTCACTTCCTCTAAACAAATTGGATTTTCTAGAGGAGCTTGGTCTGTATGCAGCTGATAAGTAGAGCAGCAGGCTATGCTTGCATTTGGTATTCCTCTTACAACTTTGACTTCATTCTTTTCATCCAATTTTCTGGTTGTTATGGTTTGCACTGATGATTTTCCTCTTCTGCCTCCTCTTTTCCTTTCACTCAAATACAATTTCTTGTCCCTTTCAGTGCTTGTAATAATAAGGTGCTTTGTCAAGCAATGCTAATATGCTGTCTCTAGTCATACTCCTTGAAGTGACTCATCCCACAGAAAGGCATTTTGCATTGCTTCCCTCCCAAAATATAG---ATAAACAACTACAAATCTTTGGGAACCCAGATTAGAATTTA-GTATAACATGCAATGCAAA---ATAAAGCCACACTAATTGCATTA---AGGTTTTTAAATTTCTGCCTTAGTGACCTAAAGTTGTATTTGAGGTTAGAAAATTCCTAAGAGATTTACAGATCCATGGA--CTG-----TATTAATTAAGCT--------------------------------------------GGAAGC-------------ACAGGAGGAGGCACTGTGTGATTGAA a score=10004 s mm7.chr15_random 4265834 1095 + 7075849 TCCATTAAAAAAACTA----GTGTCCCATCTGTCCTAAGTACTGTAGCCTTTGATTCTAAACCTGATTTTCCTTGTGAGAGATAACCAAAAATGACATTATCTATAATAAAACAAAGAAACTGACAGAATATTGAAGAAAAGGAGATTGAATGCTTATAATTGGCAATTCTGGTTATTATAAAGTGATATATTTGAATTTGGTAAAAGAATAATACAGTTTCAA-CAATGAAGTTTAAAAGAATGATTCTCATTGTATTATTCAGCAGATGCTGAAAACGATGAGGTTTG-AAAGGTGAAATATTAATCTTTCATTATTTTTAGGATTAACTCTATAGTTAAAATTCATTTGCATTATAATGTGTAATAAATAATTAAATACTAACCTGTGATCAAAACAAAAAGGAGAACAAAATTTTCTCTGTTAGGAAAACAAGCAAATGATGATA--------ATACACTAGTTGGGGAATATCTACTTTCAATTACAATTCCCCATCTTCAAGCCAGAACAAGGGCAG---GCAAACCTCAAAAATAGTAGAATGTA------AGAAATACACATAATACAATCAAAAGGAACATATGTGCTTACCTTCAAATGTGAATATTTTCTGATCTCTGTTGCTTTGTTATCACTATTTGAAGAGCCACAGCACAT-AGTACAGAGGTGACTGTAA-AGCTTAGTCAG------------TAACTTACACCTAATTTAGTTAAGCAGTTTTCCAAAGAATATA----CTATTAGCCATTGCCAT------------------TAAAAGGCTTATTAATAAATAACCATAATAGCTTATATCATTAATAACAGTGAATTAAGAAATGGGTTATTTATTCTTTTGATTGTTTGTGTGATA--------------ACATATATGCCAAAATTAAAGAATTGGTTAAACTGAGCTATTTCAAAAGTTATGATAATATTAATTTTACTTAGACTTTAAAATTTCTATGAAGCA----TTTAAATATATTTTACACTACTTTTATTATAT--TTGCTTTAAGATGTTGAAAAATTATTGGAAAAGTAAAATGCAATATGTAAGTATCAAACCTTGATCAAGCAATGATGGAACTTTACAAACACTGAGACACGCATTTAAAGAGTTTGAATGTTGAACTTGGAACTAAGA s bosTau2.scaffold7470 30649 1050 - 38447 TGCACAAAAATAAATATGGCATATCTTATCTAT--TGCTTGCTATAGACTTAAG----------GATTTTCTCTGTG--------------------------TTAATAAAGT----------------CACTGGAATGAAGAAGATATGGTTTTTGGAACTTGCAATTCTGGTTATCA-AACATG-TTTATTTGAATTGATGAACACAGAAACATAATTTCCATCCATGAA--TTGAAAATACTATTAACATTGTATTACTCACAATAATGTGGGACAAATGAGGTAAATAAAGGTTATATATAAACCCTTCATAATCTTTATAATCCACTCCATAAGTCaaataaatatgtatta-aatatattataa--aatCTAATTCTTAAATGTTATCAGAACAATAAATCTAGGAgtgtcgtgtgtg-tgtgtgtgtgtgtgtgtgatgtgAATCAATCTATACAGAAGATGGGAAGTAACTAACTTC--TTAAAA-TACTCATCTTCAATCCAGAGTAGAATTAGCTTAAAAACCACAATAAT-GTGCATTTTAAACTACAAAAATATACACAGCAATATATCAGGAGata---------------aaattt--atatttttttatGTATTTTGTTTCAG----ATTATATAAAGA-CAGCAGCATATAAGAGGAAAGATAGCTTAAATAGCTTAATCAGCCATAACCAAAATATCTTACTTTTAAATTAGATAA----TTTTCCAAAGGCTGTAATGCCTATAGAATACTGCTATGTCAACTCTACTTTTCCCTACAAGG--TACTGTTTTACTACCA-GATAAATTATATCATTTAAAAAAATGACCTATAAAATA--------ATGCTCTT--TTGTGTGTGTGCTAATTTCTCTCATTGTATAGAGATGCCAAAAATAAAAATTTAGTTTATCTTAG-TGCTTTAAAAGCAAATACAAATTTAATTCAATTT---CTTCA------TCATGGAGAAAATCTTTAATTGGATTTTAAGCTATTTTCGTTACATAGTCACTGTAATTCTTTGCCCCAGTATTTGAGAGAGAAATCTAGAAAAAATTATACTGATGCTTGCTCAAAT---------GCTTTTCAGGCTTTGAGAACTGCATTTTATCATTTAGAGTATTGAAATAGCTGCTCAGA a score=5890 s mm7.chr15_random 4280678 753 + 7075849 TCAGTTAAGCATCCATATCTGCATGTTTGCATATAAAAGTAAGGTAACTTACAGATACAACTAGACAGAATTGAAAGAATACATCAATGTTTATTCATTATTTTTTGCTTT----TCAGAATCACACTGTGAATTGTAGTTTGGATAACATTATTTTCCCTTTGTTATCTAAATTGGAATGTTAACAATACTCTAAGTAAATGTGTGCATTCT-AATCACATTGTCTCTTTTCTCCTAATAGTTAATCAAGTTTATGTGAATTTCCCTGCCCAG-GATCTGTGAATGATGATGCAACATCTCGCTTGTAAAGACAAATAGTAAAGGATGTATGTTAAGTGCTC--CCTTTATCTCCCACTCACAGCAATGGAGGT-GCCCATGGGTTCCAGATGTTCTCATA----GTGATACATTTGCTGTCAGTGTGGAAACGATATGTTATGGCCACAGTTCCTCTCATACAGACATAAACTTTACTTCTTTCATTAAAAGAGTCTAGTCTGTTCAGACA-AATTCACAGTGCACAATTTCAAGATATGAAATATAATTTGTTGTTTTACAAACTGGGTAAGTGG--AATTTTTTCCATCCCTGAAAACA----------CAT-----------------GTGTAC------AGAACTTTGATTTTATTGCTTGATTTTTAAGTAATGAGAACTAATTAAATG--------------------------TCGTGAAATATATTGAAGGAGTATTTTAGGATGTATATTTTGCTACATGACAAAACTAAAAAATACTCAGTTTAAATGTTTCTAGTCAGCAAAATATATG--TTTAAA s bosTau2.scaffold10257 4192 793 + 24496 TTAATTAAGTACTGATGTTATCCAGATGGAATATAGACAT---GTAAATGCATAGTATAATTAGGCATATTTGAATCAGTTCATTATATTTTA--AATCATTTTGTCCCTTAGCATAGAAAATTTATAGTAAATTGTCATTTCTGTTTCAGTTCTCATTTTTCACCATACAAATTTTTGTAATGAAAATACAT--ACCAAGTATTCTCTTTCTTCATCATATTTTCTCATC-CTCCTG-TGGTTAGCCAAAGTAATGTTTCTTATTCTGGCTAGTGAGTTCTGAATGATGATATAAG---TCACTTGCAGAGAGACACAGAGAAAG--GTACACTCAGTTCTCGATCTGTCTTTCCCTGTTGCAGCAACTGAGGTAGCCAACATGGTCCTGAAGTTACCATATAAGGTGCTTGAATTGCTGTCAGCTTGGATCCCTGGGTCTAAAAACAGAATCCCTTGCTGAGATCTCTGTAGATTGCTT--GTCACTGAT---GTATGACCTATTCAACCCTAAGGCATAGTTCATACTCTTAAAACATTAAAT-TAACTT-----TTTAGAGACAGAATAAATTGTAAAGGTCCTCCTTCACTGGAAAAGAGGTTAATTCCATTGCTAAATTACTAAGCAGTGTACGATGAGAGATCCTTGATAATAGTGAGTATTGTGTAGGCAGTTATGAGTAATGCAATAGGTATAGTTATTCTGCTCAAGTTTCTTCTTAAAAAATATTAA-----CATGTTA---TATTTATCTAATTATCTAACAAAACTCAAAAGTACCAAGTTTGA----CTATACTCAGCAAACTTTATGGCTTTAAA a score=45418 s mm7.chr15_random 4283003 1060 + 7075849 TGTATAATACTTA--ATGAGATTATAATAAAAATGACAATTAAGTATGTATAACTACAGAGTCATAG-----CAATAAAAATTAAATTGTTTAGTGAATTTATATTACTTTCTTAAAGAATGAC--AGCATTAGGCACTAA---AGCCCAGGGATCAGATTTGTTTCTTTGTTATTTTAAGGCTGGTTTTATCCTGTAGGCTTTCACTGATAATGGACTCTGATACGTTTTTGATATACTGCTTGAAGTGCCAATACATGTCTAAAGAAATAAGGATAAAAGCATTATTATACTAGTTTTTCAAAAATAACAAAATAGAGTGAGTATCACAAAACTCCCTTAAACAAAAAGTATGAAAGATCTGTAAGCATCTCTCCGTCAGTGAGATCCACGACCTGCCACCATTTACCCAATTAGCTACCTT-AGGAGATAATGCCACTCTGGAGTCATCTTA-TCAGCTTTCAAGCACCAGTC---AGGAGAAGAATATGGAATCAAGATGAGCTG-GAAAATGGCTCTTTTCTTCTTCAGATGCTCATCTCTGTGGGCAGACATCAATATCTATTGCAGGAGCAGTGTGAGAACTCAGTACAGATACAGTAGGACTCCTGATTTCCATTTTTTTCCTCAACTTACCTCAGTTCTGAAGTTCATCAGCTTCAGGGAAGTGCCGTTACTTCCCACTGAGTCCTCATTTAGCTCCTCATTTCAGTCAAGCTTCTGCTATAAAAGGCATGTCATTATTCAGTGTATTAAGGCATGACTTCGAGGA--CCATTCTCATTTTGGCTAGCAGATTTTCATTTTAAGAGGAAGATAAGCAGTGCATTTTGATTTTTCACCCCATGAAATTTCTCCTCACCATGGGCAATGGTACTTGAGCTGCCGTTATGTATCTCTGATCACAGTTTTATTCATCTTTTGTTATTTTTGTCTATTTAAAAAGAATAATCC-AATATTCAACTATTTTTCAACCCATGCTTTCATATCTACTTCAATTATATTCTTTAAAGGGATATCACATTTTTGAAGCAAATAAATATGATGTTTAAAGCAAATGACTATAAT--TTTTAAAAt s bosTau2.scaffold10257 8340 1060 + 24496 TGTACTAAACTTATCAGTAGATCACTGTGAA---GAAAATTATG-ATGTCAAAATTGAGTGTCATATACATTTGATCAAGATTAGGTTATTAA---AATTTTG-----TTTTTGGAAGATTAACTTGGTATTAGATAATCACATGACACAAAGAAAGGCTTTATGTTCTTGTT--TTTAAAGCAGGTGTTACTCTTTAG-TTTTTGCTGATGATGGAATATGACAAGTTTTGGATACAGTGCTTGAAGTGCTGATACATGTCTAAAGAAATAGGGATAAAAGCATTATTATAGTAGTCTTCCAAAAATAACAAAATTCACTCAGCATTATAAAGCTTCCTTAAACAAAAC-TACGGCATGACTGAAACTACCTCTCCATCAGTGGGAACCATGACCCACTGCCATTTATCCAATTAGATACATTCCAGAGGTAATGGTATTCTTGAATCATTTTACTAAGCTTTCAAGCAGTACTTTTGAGAAGAATAATATGGAATCAAGAATTGCTGAAAAAATGTCTCTCTTCTTCTCTAACCATTCATCTCTGTAGGCAGGCATCAATATCTATTAAATTATCAGTGTGAGGGCTTGCTAAAGATACAGTAGGACACCTGATTTCA--TTTTTTCCTCAACTTACCTCAGTTCCAAAGTTCATCAGC-TCTGGGAAGTAGAGTTACTTCCCACTGAGTAGTCTTTCAGTCCTTCAGCTGACTTGAATTTCTGCCATAAAAGCATAGTCATTATTCAGTGAATTAAGGCATGCCTGTGAGCAACCCTTTCTCATTCCAGCTAGTAGATTTTCATTTTAAGAGGAAGACAAGCAATGCCTTTAGA-TTCTCACTCCATGAAATTTCTTCTCACCATGGGTGATTATGATTGAGCTGCCATTATACATCTTTGATCACATTTGTATTCATCTTGTGTTA-TTTTGTCT-TTTATAAAGAATAATTCAAATAGAAAACT-TTTTTAAACCCATACTTACAAATCAATCTGAATTATGTTCATTAAAATGCTGTAACATTATTGAAGCAAACCAAATAAATGCAAATAGTGATTGACTATGCTGCTTTTAATAT a score=2836 s mm7.chr15_random 4286451 113 + 7075849 ACTCATTAACAGAATTGTGTTGTGCTACTTGTTCAACAGGAACATCTACATGACATTTCTGCTCCAGACAAGACAATGCTTTCATTCCT-----CAAAATGTGAATACAAAATGTCCT s bosTau2.scaffold10257 19463 110 + 24496 ATCCATTAATGCACTTATGTATTAATGCCTAATTAAAAA--------ATATCACATTTCTACTTCAGGCCAGACACTATTTTAATTGTTAGTGATAAAATATGGGTATGAAATCTCCT a score=13884 s mm7.chr15_random 4286748 873 + 7075849 AAAACAACAAAAAAGAAAGTCCACCTGATGAAAGTACATTATAATTTTATTACATATATCTCATTAATTAGGCAAATTTCTTTGTACAGGTCAAAGGTTTCAATATAATCATTCTTCTGAGATTCTCC---TCCATGATAAAA-GCAGTATTTGTCATAT-AATGCAATAT-TTTCTGTATGAAAATTCTATTTCTATGGAAAAA--------TTACTCAGCAAACA------TAAACAGACTTTTTGAGTGTTAAATACTTAGGTATGGGGGTTCAAAATATTTATTCATAGGGATATTTCTA-AATATCACAAAACAAATGATA-CAGCAATCCCATCTGTTT-AATAGCTAG----------TGGAGTCACATGATAAGGATGGACGTTTGCTGGGGCAAATGT-TTATATTTGAACATAC--TTGGGA----------------ATAATATATAGAATAGTGCCCAAAAACATTTGATGATATTTAAAAGGCTAATGTGCTATTTACATTCACCTGAATTTTATGCTCAAAACTATATAGATTTT---TTTCTTGTTTTAA-------AATAAGAAAATAATGATTAACTGGTTATATAAATGTTTTTCTTATATTTGAATTGGCATTTTGAATATGTGTTTAAAACAT--------TAAATTGGATATTTGAAAGGAAAGGTCCA----------TTTTTTCCTC------------AGACTACTCTTTATTTACTAACACGTATTTTCCCTATTATTC-----CTAAAACATTCTTTTTATATTTTCCAAGTATATGACATGGCCAAAATTAAAATTCAGTTCTTTATTCT--TTTG--GAACAATTTATC------GCAATTTTAGTATACAGGTTATTTTTGAAGCACCTCAATGTGTCTTGAAACAAAAGACCATTCATCTTGATTTCTCTTCTGCTATGCTA------TACAGAAGTTTTAGTAATATTAGACTAG s bosTau2.scaffold10257 19596 952 + 24496 AAAATTCTAAAAAACCAAGTGAAATTGGTGGTTTTAAACCACA-TTTTAGTGAATAGGCTATATTAATTACGTACATTTCTCTGCAAACCTGAATGAATTAG---TGGTAGGACTTCTGAGACTCTTTAAAGTCAGAATGAAATGGAATATTTGTCATCCCAGTGATACATGTTTATAGATACAGATTCTTTTTCCATGAAAAAAATGGTAATTTTCTCAGTAAATAGATTTCTAAACAGACTCTCTGAATGTTAGATACCTGAGTTGATGGTTTCAAAATATTTATTCATGGAAACTGTCCTGCAAAATCACAGCACAAAAGAGACCAACAATTCTGCCTATTTAAATAGCAGAAACATTTCTTTGGAGTCAAATAACAAGAATGAATTCTTGCTGGAGAGGAAGTCTTGCATGCAAACAGACTTTTGGGATAATGAGTTGAATGCTAGAATACACTGAGTAGCTTTAAAAGTCATCTGTAGGCATTTAACAGACGTTTATGCTTTTTAGATTTGCCTCaaatttattttt-------ttttaattttGAACTTATTGCTTCAATTGAAATAACAACAGAAGTATAGTTAACTGGTTATAAAGAAGGCTTTAAGTGTTTTTAATTGATGTTTCTGCAATGCCTAAAACACATTTATATAGTAAATTTTATACTTGGGAGAAAAAATAAAGTACTCTTTTTTTTTTTTTCTTTCtgtaacagatattgcactttcttccccaatattcattttccct-ttattctctgtttaatgcatcctatcaatatttaatagacaaatgacct-cctataataaaagctggatttctcattctcctttgcCCAAAAACTTGTCCTTGCAATAATCTTGGTTTGAAGCTGATCTTT--------------TATATTACTGAAAAAG------TGTCTTTATTTTTATCCAGTTCTGTTattggactataaatgtttta-taatattgtgttag a score=3760 s mm7.chr15_random 4287622 294 + 7075849 ATATTTAGGCTTTCTTGCTGAACAAGATACAAAATGCAATTAAGATTTATC--TAATGGCCAAAAACTCCGTAGAAGTAAAATCAGAATCACTCATATATAGGTGAGGGAAATATAAATATGTAAATATTTATTTTCATGAATCATAAGCAATGCTATTCTGAATTCAATGTCACTTTGTCCTTGTCTTAGTTATCAGTAACTGGGTCTTCTTAATAGTAAGTGTGTTACACATTTAGAGTTCAATTTATACTGTTCTCATTATTTCTTTTGTGCTTGGGGAAGAATAAAGTAAAA s bosTau2.scaffold10257 20888 220 + 24496 ATATATAAGTTTTCTTACTGAACAAGATAAAGAATAGAAGGGGCATTTGTCCTTGATGGTC------------------AACCCTGAATTGCCTATACATATGTGAGAGAGA-------------------------------------------------GGGTTTGTGGTCACTCTCAGCCTAACCTAATTACCACTAATACACTCTCAATACTATGAATTATACCACATATTCA-----TAATCCATACTG----AATGATTTTCCTCGAGGTTTGGGGAAAATAGAGTAAAA a score=29421 s mm7.chr15_random 4304958 1189 + 7075849 TTGTATTATCCTTATTCTGAAAAAGAAGAATCTGAGGACACGACAGTCAATAATTCATCTTAATTCTCATTGTTGTATGCTGAGGAAGCAGTACCCATACTTCCTATCATGTCTGTTGGATCTAAAAATATGACCTTGCTCTCTCTTTTTCCCATAGATTACCAATGAATTATATTAACAATAGTTATAGTTTGTTATGTGATGAAAAATACGTATAAATATTTAGAAAAAAAACAGGTGTTTCATTCTAAGACAATGCAGA------------TTTCACA--ATCAGGTGTCCT--CCAAACTTGGTAGCAACACTTAAACATGGAATAAGTTCTACCTTTAAGGTTGTTACTAGGGTGCACCATTCATTTTCTGT-CAATATTTAAAAGAATTCCAATTTG------TATGAA--TTTCTGAACACAAATAGGATACAAATAACACTTCTTTCTTAGGGCAGAATTATCTTCATTGACCACTCCAAAAAGATAATGGAAATATTATGTGGAAGAGATGCTGTTCAG-------------CAGAGC-TGTTAGGAGCAATTTTTAGCTTTTTTTTTTTTTTTTAACAATAAATGACATTAAACACACCCAGTTGTCAGATTGCCATTCTGTGGTGAATATTCTGGCTGTGAGAGTTTTC-AAAGCATGAGGTCAGCCATAGCAGCATGGAAATGTAGGCGGGCCTGTCCACCAGAGGAGGTTAGCATCTCTTTTGTGTGTTTGACATAAATCTTTGTGCAACAACAAATGTACCTCTATTCCTGCTGTTTTTAAAATGCGAGCTTTGTTCCTTTTTGCCACTTCTAAAGCAGATGTATCACATAAGAGGGTGGGAAAGCAGAGCAAGAACTCAGCAACTATTTTAAGAGTGAATATCTTTTACTCATAAAAGGATCCTAGAACTGTATTGTACTACTAAGAGAAATATGCTTTGACGTCCCAGTTAGGGTGATCAAACTGAGACATGAGAG---ATGATTATTAACTTCGTTATGACACTATTGAAAAACTTAATAGACTCAGTATTTTCAGTGCGGAGTTAAGTTCTATTC--ATATTCTTTACCTTATTTCTTTGCCT---AATTAATTCAT-GCTTTTGATGATAACATTTCATTGTTTC---TCTGTGG-------TACATAATTT---TCCATGTGTACACAAACAGAATCA-TTCATAAATATAGA--------------------CACATGATTCCAGCAACAATACTATAAGATCATAGTCTG s bosTau2.chr1 59610453 1176 + 102834029 ttctattatacctattccacagatgaagaaactgagtgcagaaagttaagtagttttcctgaggttgaatagtcatatgttgagtatccagaattcaaac---ctatcttgattttagaattta------tagctttaccaTCT----TTCTGACAATTTACTATTGAATCATATTGATTATAATGCTGGTTTATTAC----------ATATGT-----TGTTTAGAT------CTTATTCCTGATTCCAAGACTACAGTGACATAGCCTTACTTTTCACAGAATCAAATGCTCTGTCAAAAGCTG------AGACTGAAATTAAGATTAACTTC--------AGATGATTTATAGGCCACATGGATTATTTTCTATATAACAATCACATAAATTATATTTTAATTTTCTATAAACATTTCTGAAAACAAATAGCATGCAACGAGCATCCCAGTCTTGG---AAAAATAGTTTCATTGAACAATGTTAGAAAATA---GAAATATTAGTGGAAAGAGGTGCTGTTAAGAGATACCATTTATTAGAGCCTGTTTAGGACAGTTTTTAGCCTTTTCT---------AAAGGTAAATGACATTAAACATACCCAGTTGTCAGAGTGCCATTCTGTGGTGAATATTCTGACTGTGAGAGTTTTCCAAAGCCTGAGACTAACCATAGTAGCATTTAGGTGGAGGCGTTACTGTCCACCAGAGAAGGTTAGCATGCTTTTTGTTTGCTTGACATAAATCTCTGGGCAACAACAAATGAACCTCTATTCCAGCTGCTTTTCAAATGCAAGCTTTGTTCCTTTTTGGTATTTCTAAGGCAGATGCATCACATGAAGGGGTGGGAAGAGAGAATGAGAACTCAGAAAACATTTTTGGAGTGAATATTTCTCACTAA-AGACAGATACCACAACTGTATTGCATCAGTAATGCAAATATTC-TTGACTTTTTAATTAGAG------ATGTAAGTCAAGAAAATGTATAATTACTAAAATT-TAGTGATTCTAATTAAATA--------------TAATTTTAATGC-------AATTCTTTTTGAAGATTTTTAGTTTTGATTTTTTCTTTATAAAATGGTCCATAGTTTTTGTTAAGTACTATGTATTCTACCTGatatataggtatatatacacacttcatatatatatatacacacacacacacactccatatatatatatgtatatgtatTTACACATCCGTATGATTT---TAATAAAACACTGAATTTTTAATCTG a score=7844 s mm7.chr15_random 4306318 607 + 7075849 TTTTGTTTCTTTTACTTTGGTCTTGAAGATGATTTCATTACACAATTGTGTCCATGCTGAATAGAAACAATATCATGTGCTTTTCCCAAATTGTAAAGTTTC-----ACATCACCATTTCACTTTAAGGCTGTTCACATTTCCAGAGGGATGGTAAATGGTAAATGCAGTACCTGGCTCCTGTCCTTGTTTTGGTCTTGGCTTTGGTAGATGAGTTTCAGGTGTTTTTAATTGTTTCAGTTTTCTGTAGAA--ATGGCTTTGGGGCTCAGATGTGTGTCTCCTCATTATAGCATTCTCACTTGTAGAAGAAACGTTTTTACTTACCTTGatttaaaaaaaat-taaaaattCATC--------TTCCATTTGT----AATTATTTTGTGTATCTATTAAGATTATCAGTACAATCAATAATTGTTTTGTGGTTCCCTTTCGAGACTACTTTGCATCTTTTGAACAAAGTAAGT---AGCATACCTCAACATTCTGC-----TTTGTCTGCTAGTATAATAAGAATGTTGATTTATGACAAATTTTTGAATTTATTAAGTTCTATACAACATTAATAATTTTATGGTAAATGCTT-------TTTGAGGAAAGCTATTTTATGTGATTtgtgtgtgtttctgt s bosTau2.chr1 59611826 610 + 102834029 ttgtgataattttcatctgtttctgaaaatcattccattatactgtcatatcaatgatgaattgcaacagttttacccgccccttgccaattattacatttctaaatttatccctcttttaatataa----gttaataagtgcaaaagaatgataaatgg---gcacaatatccagcagctattattgttttggtcctggctttagtggctatgtctcaggtgtttc--attgttccactattgtgtatgatgatggcttttggcct-gtatgtccattatctcattgatgtagttcctattg----------atttttgaatgtctttctgtagtatatgtgttgaattttgtcaagtgccttttcattgtttgcaaaaaatgatatttcctcattagatttattaaaatgagaaatatttgctatatattttccacccttgaacatttttgattttctgggataagctaatttaatcttgttttaacaatctcctaaattctgtttacaaatgtaat--tttttttcattgatgtcag----------taattgaggttgatatgtagttacttcttttaggggaaagtccttattaaatttgagtgaaaatgttatacatgatttaaaaataattttgt a score=4304 s mm7.chr15_random 4311372 305 + 7075849 CCTTGCTAATATACA--TGTTAAG-AAAGATTTAATAATA--TTTTCTATTGATGTC--TCATTCCTGTGTAAAAAACATAATAAACTATATATCTT-AAGTATGAAAGTTAATATAATTCATATCTATGTTTATTGAA---------ACATAGTTTGAAACACAA--------GAAAAATAAGTATAAATTTAAATAGAAAGTAGTACGTGAGCACATCCACTTATTATTCAAAATATCTTTATTAACAGGAGGACACTTGTAAGTAGATTTGCCAAAGGACAAATTATTAATGGGTGGAGGATGGATATGAGAAGTCTGAAGGTCAAT s bosTau2.chr1 59620174 307 + 102834029 CCTATTTAATATACAGTTATGAAGTAAATACTTAAAGTTGATTTTCCTTTCACCATCAGTCATTCATTTATA-----TATAATAATTAGCATATTTTCAAATATAGAGTAGAATATAA-----------GTTTATTGAGTAATGACTGACAGAGCTTAAAATAAAACATGGGGAAAAAAAGAATGACAGTTATAAATAGTAGGAAATAAGTGTGCAAATCAGTCTTACAGCCTGATGAACTTGATTAATGTATAGTTGCTTTTCAGTAGATTTGCAAAAGGAAAGCTCATTG--GGTTGGGGGGTG-----GAGAAATTGTAAGCTCAAT a score=20674 s mm7.chr15_random 4375508 670 + 7075849 GAAAATCAGCTTTCAAAAATATAA--TGACATTAAA--TACTTTCTCTTTTG-AGCTTAGTTTTTGGCTCGGAAAATTACAT--GTTGGTTTTTGTTGTCGTTGTTGCTGTTTTCGAAAAAGGGATGATAAAAATGTCAA-TGCCATGGTCATTACTCTTCAATTCATAAGTATCTGCTCACTCTGTGACAGGCTATA-------------TCTCCTAGACCCACACTTGAGGGCACTGATGGTCCA--CTGCAAAAAAAGT---------AAACTTGTTCTCCTACCTGGGGTGCCCTCTGATGTCTTTATTCCCATCCTGCAGCAGTACTGTGCGATCCCGTAGTCCGCAATCTTCGCAATGATGGCAGCATTGGGATACAGGGTAAAAAGCAGCACATTGTGGGGCTTCAGGTCACGGTAAATAATCATGGCTGAGTGGAGATACCTGCCAGAGAGTACACAGGAGGTCTTATCAAAAAACGGTCATCCTATATTAATTTGCTCAGATTTCTTTTCAATATGT-TGTGTTCTTCATGCAAAACGTCAAGAATAGTGTGTTAACTTTGTCTGTGGAAGTTGAAATATATACTGCAAACAGGCTTCAAAGCGTA-AAGATCAACACTACAAAGCAAGGTGAGGCTTCTTCCCCATAACTAAAGCA-----TCAAGCCTGGTAGGCAACTGGAGCTTTAACACACAGCC s bosTau2.scaffold3032 58688 678 + 93130 GAAATCCAACTTTTAGAAACATAACTTGACATCAGACATACTCTATGTTTTATAATTTGACTTTTTCCCTAGAAAATTACATCAGTTGATTTTT-----------TGCCCTACTGGATACA---ATGATCAAAATCACAAATATACTGGTCACGATT-----ATAAATGAACATCTGTTCACAGCGTGATAGGCTACAGTGTTCTCTTGAGTCTCCTGAACTCACAACTGAGGGCAGTGGTTATCCATCCTGAAGAGGGAATTATCACACAAAGCTTGT-CACCTACCTGGAGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATCCCATAGTCCGCAATCTTGGCGATGATGGCAGCATTGGGATACAAGGTGAAAAGCAACACATTATGGGGCTTCAAGTCACGGTATATAATCATGGCCGAATGGAGGTATCTGCCATAAAATGCACAGGAAATTGTATTAAAATGTGATTATATCATAAT-ATATTTTGGCATTATTTTTTAAAATATACATATTCACTAGGAAAAGCATCAA-AATTCTGTGCTG--TTTTACCTTCAAAGTTAAA--AGATACTATAGAAGGAAATCAAAATATGTAAGCCCTGTTTTACAAAAT----TTATGCATTTAAAACA-AACTAAAAGACATGTTAAATTCTGATAAGTGATTTAAACTTTAAGGCACAACC a score=7347 s mm7.chr15_random 4377427 551 + 7075849 TTTTGTTACAACTTTCATTTATCTGTTTTGATGTTCTTAAAAATTGTGCAGAAAATGGTTTCTTTAGTTTTTAGAATTGTATCACTTATCTTTGTTGTTTACCTTTTTCTGATTATTATTATTCCTAATGTTTTAAAGAATGTTTTCTTCTTTTCAGCAaaataaataaataaataaataaaataaaaaaataaaaaaataaaaaaaATCAAACTGTAAGCTCTCACCTAGCTATTATCTCCAGCCC---TGGGGATACAGCCTACTGTACAGCTAATTCTTCACTGCTAAGGTTAATAAAGAACATC-TGAAC----AGTCAGGAAGGCAAAA--ACTGTCTTAGGAGGAACAAAATCTGGGTGTGAGATGGTG----TCAAAGTGT-----------------------------------ACCTGGATTTGA---GCATTTTGAGCAAATAATAGAAATCACTTAATATAA------AATGCAATGTTTTAATCTTGGCCAAGTATTATCCACTCTGTGAACGTGGTCGAAGAACACACAGTTTCCCAAATGCTAAAATAACTATTCTCCCTTCTCCTGAGAAATCTTTAAATTCCTGATTTTCCC s bosTau2.scaffold3032 59509 521 + 93130 TTTTGTTATAACTCTCATTTAT-----TTAACAATTTTAGAAGTTCTTCA--------------TAGCCTTTAAAATTCTATCTCTC--CTTTGATATTTTTTTTTTTCTGAATAAAATATTTCCTAATTTTTTGGAAAATGTTTTCTACTTTT--------TCAATAGTTAACAAATTAAAATAAAAGA--------------------------------CTTTTTTGGCTATTTGTACTGTATCATTTGAAGATGCAATCTACTTTAAACCCAGATCT--ACTATGAA--TTACCAAAGAACAACTTGAATTGAGAGCTGGAATGAGTAAACCACTGTCTTAGGAAAG-------------GTGATGTGGGGACTTTTAAAGTCTTTCCTTTTAGAAATTGATCCATTCAACCATTGGCAACCAGAGTTTGACATTCACTGTAGGTGAAGAATAAAAACTAGCTAATACAAAAAAACAAAACTAAGTTTTCCTCTCAACCAGATCTTGTCCATTTTAGAAACATGGCCAAAGAGCTATCACTAGTCCTAAAACTCTATTAACT----TTCCTTACCC------ATCTAAAAAATTCAGATTTTTCC a score=29139 s mm7.chr15_random 4378012 1021 + 7075849 ACTGAAAGGACAATTTTTCCTGGAACTTAATGAGGATTGTTAAAAATCCTTTGTTTATTTCTGGCTTGGAATTTGGTTAAGATTATATTTATAAATATTTACCTTGTTACCTCCTACCAATCATTGCTGG-GGCCTTAGGAACAGAGAA-CTGTCATGTCTGGAAAGTTCTACTGTGGGATGGCCCAGAGTGAATGCGTCATTTCACTCCATCAACCTCTGGGCTCAACCTCTCTTCCAGGATGTGCTCAGGGCAGCACAGCGCTGAAACGATTCGCTTCAGGATATACAGTCTGGGCTGATCAATAACACAAGTGCACTAATGAAGTTGACCTTAACAACA-GTAATTCCGTTGAAAGGGACATTTACCGAGGGCTTACTGAGAGGCCATTAGCTGTCTT------------GAGAAAAGCCAAGAGATTAAGAATTTTAAAAGTTAAG-------TATATGTCATCAAATATCATTCCTAAACCGCCATAACACAGCCCTCTCTCTGG-TACAGGCAGAACACAGGCTCCCTCAGAATACCTTTGGAGGACTAAAAGAC----AGTCAATTTCAGATCATGTCATTTGAATATCAAGGTTATCTGGTTTAATTACAGTATTCCATTATAGAATTTAATCTTAAAAGTGCAATTATAATACCCTGTAATAGAAAAGAAAAAAAAAGCTTTTGAAATTTTAATAAGCACAAATCACTTCTCACTGGCAAAAATTCAGACAAATGAATTAAGGCATTGTTTGGGAATAAGTATTGTCAAGTATTTCATTAACGTAAA----CTATACTCGG-TTAACCAGTCTTTAATCATCACTATTATAAGAATTACTAAGAAGCCCCTATCTTTGTAATTTAAAGCCAACTTTATCTAATCCTGAATAT-ATTACTCTAAAAATAGAATGCATTCATGTCTTTAACAAATATGCATTAGATATCTGTGAGGTTCATTCATTAGTGGACACAAAGCTATCTTTATAGATCTGCTTTTAAGAGGGTCCTAATCTAGTAAAAGACAGTGCTTAGGTATACTAAGA s bosTau2.scaffold3032 61016 1020 + 93130 ACTGAAATTACATTTTTTCACAGAACTTAAGAGAGGTAAATTTAAATCCTTTGTTTGTGTCT--TTTGGTATA-GGCTCACTTTATATTAATAAATATTTGCTCCATTACTGAGTACTAATCACTGCTAGAGGGATTAGGAGCAGAGAGGCAGAAATATCCTGAACTTCCCATTGATTGATGACCTAGAATGTATGTATCATTTAACTTCATCAATAGA-AGATTC--CTTCTCTTCCAGGATGTAGTTAGAACATT-TGACATTAGGCCTATTCCTTTCAATAGACATATTTTTGGCTGA-AAGTAAGAGAGATATACTAATGAAGCTGACCTTAACAATAAGTAATAGGCTTAAAAGAAAAATTTACTGAGGGCTTACTGAAAGGCCATTAGCTACTCTTATCCTGTTGAAGAGAAAAGCTGGGAGATTAAGAAGAA-AAAAGTTAAAGCCAAGTCATACATTATTGAATAGCAT-CCAAATCCTTCCTATTGCATGCCTCTTTCAGAATATTTAAAGACTACAGACTCTCTCAAAACACTTTCCAAAGGttaaaaaaattaaacttaattttaaataatGTCAGTGGGAAGGAAAGATTATCTGGATTAGTTAAAATGTTCAATTATAGAATTTAATCTTAAAAGCATAGTTTTAATAGCTTTAAATAGCAGAATAA--------CTTTCAAAACATAATAAGTACAGATGTTGCCTTAGTAAGAATAATTCAGCCA---TAATT-ATGTATTATATGACAATGATCATTTTCAAATATTTTATTAAAACAAACTGGCTAAACTCAATTTAGTTATTTTTAAATTGTGATTGTTATTAATGTTGCAAAGAAACT----TCTTTGTAACTTACAGTAAACCTTATCTCACCCTAAAGAGAATTATTCTAAGAACAGAATATCttcattcatttaacaaatatatattgggcacctatgagaggcagtccctgg-ggatataaagccatcctcgtctccctgatctt--tagggccacaatcgagagggagaga-----tgggtattctaaca a score=3116 s mm7.chr15_random 4379130 622 + 7075849 AGGCTTTAACCT------GAGGCACACATTCTCTG-----CCTGTCCTTCTTCACAGCCTGATACAAAGTTTTACATGGGGTAAGTGTGCAGGAAACACAAGTGAACTCAGGGTGCTGAGGCAGAAAAAGATGAAGAGTTTACGACCAGCCTGGCTGAAGTGGACTGGCTCCAGCGTGAGTTTCTGACTCTTAAAACCAAAACCAAATGAGCACATGCCAATATGTGTAAGGAATGCTTGCTCTCCGTGAGGAGGCCGAGCTGTAAGGTACGGATGGCATGCATGCAAATCCTTGTAGGA-ATGAGTTTTCCAGA-----AACCTCGGTGAGAACAAAGGTG-GACACACGGAAGTCAACCTGGTTAGAATGTGGACTAG-AGACATGGCCCAGAGTAAGGCTGCAAAGAAACCCAGGGCACTCATAAAGGACCGCCACGCTGTGACTCCACTGAGCTGAGAGGACCTTAGGCA--CAGCACACATAAAAAGCTTCCATGCTGTGACTCCACAGAGCTGAGATGCACATTACAGGTAAGTGGAAAGACCAGGGATTCTCAAGTATAATTAGATTTTTATTTCAGG----------GGAAATGTTCCGAAAATTCCCTACGGATACTGGATTGA------AGTAGAAGCATAAAAATAAA s bosTau2.scaffold3032 62118 497 + 93130 AGTTTTTAACCTTGATAAGAGCAATATAATCTCTATCTTTCTTTTCCCTCTTCAGCAGCCAGTGTAAAGTCCTGCGTGGAGCA----------------------------------GAGTCAAAA---------------------------------------------------------------------------------------------AACATGTGTTAGCCAGGGCAACTCTTCATGGTACAGTCAGTCATCACGGTGAAGACAGTATGTGAACAAATTCCAGAGGAATATGAGTTTTGTAGGCGGACGATTTTTTTGACAAGACAGGAATGACAAATGCAAGC---ACAGACATGGATGCCAATGAGAAGTCAAGCCCTTCAGCATGGTTGGAACGAGGGCAATGGAAT---GAAAGGA----------------------GTCTGGAAAGGC---AGGCAAGAGGCACACATAAAGAGTTCTGAGGCTATGAC----AGGAATTTAGATGTATTTTCCAGATAACCTGAAATTCTAAGGAGTTTCAAGAATACTTAAATTTTTATTTTGGAATGATATATCAGAAATATTCTGATAATTACCTATAAATATCAGACCAAGACAGCAGTAGTGGCATAAAAATAAA a score=5258 s mm7.chr15_random 4381199 205 + 7075849 AAATAGCACATCTTCAGTTTATAAACGAAAGCTT---GAGGATTACATGAAAAATTTGAGGAAAACCTGGGACCCAGGATCAGTTAAATCAAG-AAAGTAATTGTGATAGCTTTGGAAAACAGTAGCCTAGAGG-GCTCTTTACTGAACTCAGGTTGCTCTGAGGCTCCCCCTGGTGTTCAAAAGCAGTCACTCCACCCTAACTCCAAAT s bosTau2.scaffold3032 66624 210 + 93130 AAAAATCAATTATTCATTTTACAAATAAGTACTTTGGGAGAATCATGTAGATGATTTGGGAAAAAATCAGGACCTGGAGTAAGTTAAATTAAGGAAAATGACCAATACAGGTTTTGAAATAGATAAGACATAGTTACACTTTTCCTAGATTAATTTAGTACAAGGTTCCCCCTGGTGTTCAAAAGTAGATACAGCAACCCAGATCAAAAT a score=26894 s mm7.chr15_random 4382099 1328 + 7075849 aaggatggctacaaAAC--CAGGAGATGAAAGAAAAATGCAGAGAGGAGGACCCTAAGGGTTGAATTTGGAA-GCTGACAATTA-----------------GCACCAGGTTTTCAGCATCACTCATAGTTTTCAGGCT------------------------------AAGAAACAGGTAGGGGTCAGAAAGGCAAAATTAACGATTACTAAATGTATGCAACAGCGATGTA----------------------CCAAGGTCTTGTGTCTGGAGGGATGGGCCTCTCAAAGATGGCGCCTAG----CATCCAGATACACGGTGGACTGTGATTCTGAGTCACGTGACG-TATCCACGTGGAATCCAACATACTATTCTGATCTGCTTCAGGATTATGGACTAGTTTTCATGATTAAAAATTTTTC----TACTTCATACTTTCCTTGATGTTTGGTGGCCTGACATAATTATGTTCCCAAGGG-----GGTAGCTATCTAGGGTTCAGATCAAGGGC--------AGGAATTCTAGGATTGAGTGCTACGACCACCAGCCGTGAAGGGT-TGTGCTCTCTTTACC-------------------AAACTGGATCAAGGAACTTACAGCTAC-CATCGAAATGGTTAG----------------CAGAGTGCAGCGAGGGAGTGACGTTCTCAGAGCCTG-GAGTGGACTCAGGGTTACAGCGCCCATGCGTTAAGTAGAAACCGGTG----CTAGCCCGTTACCTCAGGCCGTCGGCCACATGCAACGCGATCCTGTGCTGGAGGGTTCTGGTGAGGCTGGCTTTGTCCTGCTGCAGCAGGCGATCCAAGGAACCTTTGGAGGCCAACTCCATTACCAACATCCGAGGACGAATACCAGCCGCCAGCAAGGATATCAGGCTGGGGTGGTGAAGGTGACAAAGGACCACCAACTCCTGCAAGGGGCCAGAAACATGTGAGTCT-------CACTCACTTC--ATCAAGGATCCATCACCTGCCTGCCTGTCTGCCCTTCTCTGTGATCAGCTTTCTCAGAGCGGCTGGACTATAGTAAA-TGCCCCCTTGTTCTTTAAGGTTTTTAATTCTTCCCA--TTTTCAACAATATACAGCTAATTTTGAACTGATGCT-CAGATCACATATTTAAGTTCTATTTTTCCTTTTGATCTGCTTACACGAGACCAGTTGATATGGGGATGGCCCACAGA-GGTGGATGTACTAACTGGTCATGTT-GTCCTACCCTCTAAATTCTAGTTAGCGACTTAATCGTTCTCAGCCCTGGGCTCTGAGCAGCCTACTGCCGGATCAACCAAGC-TGGCG--GAAGGAAGC---------TAGTCTCTGGTTTCAAACCCAGGAAGTGTTCTAAGGACACATGATCAGTTCCACAGGACTACATAGC---GCCCCCTGCCT--GAACGCTCTAATGCCTTTCTACTCCTTGTTAATTCAAAGCCCATGCA s bosTau2.scaffold3032 67942 1462 + 93130 AAGGATGACTCCAAGCTGACTGGAGTTGGGA-AGGGGTGGAGAAGGGGGGAATC-AAGACTTTAATTTGGGATGTCTTCAATTATTACAGACAAACTCGGGACACTATACATTAAGTATTAGACACAGTGTAGAGACTGCAAAAAACAGAATCAGAGATTTAAAATACAAAAAACAGA---GAATTAGAGAAATAAAATCAAAGGAAAGTAAGTACATTAAGCAGTGATTTATTCCAGTCTCTATCTCCAAAGGCCATAGTCTTTTCTCTCTGCTGTGGTGCCTCTCCAAGGCTCTGTCTGGGTACCATCCAGCTGCAGGGCTGG-TGTACCTCGGAGACACACCATGGTCTTTCAGGACAACCCAACTTAAATAATTCGTCCCTTTCAGAAATCTGACTTCATCTCTCCTCATCAGAATTATCCATGATAACTGAAACTTTCCTTGATACTTTGAAGCCTCACCTA--CATGTTTTTAGGGGAGGGAGGTCAATGCCt--ggttaagatcatgggctctggagcaggacttccggattcaaactctacttctgttagctatgaggggggcatgcttttcttactcttattttatgaaattacaaaatctgaacagggaaatggtagttttacactcaaatagtttgtgaaatattaCCAGGACACATTGTTACAGGGAAGCGCTGTCCTCAAAGTCTGAGAGCAAGTTTGGGCTCATATGTATTATGCACTGAATAGAAAACAGCATGACCTAATCAATTACCTCAAGCCATCGGCCACATGTAGCACGATTCTGTGCTGCAGCGTTCTGGTAAGACTGGTTTTGTCTTGCTGAAGCAGGCGGTCCAGGGAACCCTTGGAGGCTAATTCCATCACCAACATTCGAGGACGAATCCCAGCTGCCAGCAAAGATATTAAGCTGGGATGGTGGAGGTGGCAGAGCACCACCAGCTCCTGCAA-AGTCAAAAATCATTTAAGAGTAAATAGACCATCACTTCTTACCCAAATACCTCCTTCCATATGTCCATCAACACTT---GGAGAACAGTTTTCCCTGAGTTACCGGATTATAGCAAACTATCCATTTCTTCTTTGAGCTTATTTATATTTTCCACGTTTTCAGAATTAAACCACTGGTTTTGCAACTACACTGTGAATTAAACATTTAAGTTCTCCTTTTCTGTTTGCTTTGCTT-TATCAGAACATTTAATGCTGGGACAATACATACACTGTGGCAACATTAATAGTTCATGTCAGTCTTACCTACTGAATCTTCCTTAGCCACAGATTC-----------------CTGAGCAGCC-ACTACT-GATCAACTGCACTTGGCGTCTGAGGAACCGCCTGCCTATTATCTCTGGTTTGATGACTAGAAAGTTTTACAGAGAAGAGTATCTATGTCTACAGAAATATCTGGCATTGccccccatctaaaaactctctgttgacttcctgttacttttagattgagatcccatgca a score=16094 s mm7.chr15_random 4384173 603 + 7075849 TATGACTTAATTTAATAACATCACAGCACTTCTTACTTGTCTTAACAGCCTAAGAGATGTGTGCTTATTAAAAATCTTCACAGCCACTTCCTCTCCTTCGTAGGCAGCTCGATAAACGGATCCAAAACTTCCATCGCCTTTTGAGAAGAAAACAGGAAGCATCTT-----ATCTTTCCAAGCAGAGAAACCGAATCCATCTCGGGAGCTAGGGCTGTATATTGTATACCTGTTGTGTATTT---AGAAAACTCTGACGCCTTGTTT---ATAGAATGAGCCTCTTTGAATGCTTCCCCTCC---CTTCCAATCAACAAGCCACTGTCAAGTTCACCGACGGATCTGGTGTCCAGCCTTCCTAT-TTCCCTCTATACAGGATCTATGAAAACACGCCACCACTCCTCTGTCTCCGTCTCTTCATAGGTGAATGGAGTTTGCAC-TCTTCTCCGGCAGCACAAGCCACTGCCTAAATGATATCATATA---------------------------------TGACTTCCCAAACCTCAAGCCCAGCCCACTGAAAA--CCATGCTGTTATTATTATTTTTTTGCCTCCAA-----TTTTCTGTCCACTTTCTGTACATCTGATAAAAATAAAAGGAAA-TGTTTTCACTATCGTTATGAAGT s bosTau2.scaffold3032 71606 628 + 93130 TATTATTTAATGTAATAATATTGTTGCATTTCTTACTTGTCTTAACAGCCTAAGTGATGTATGTTTATTAAAAATCTTCACAGCCACTTCTTCTCCTTCATAGGCTGCTCGATAAACAGACCCAAAACTGCCATCACCTTTCAAAAAGAAAGTACAAAGCACTTGGGTTAATCTGTGCAAGCAGAAAAACTCAATAAAT---------------TGTATCTTTTGTAATTA-TATTTGTTTTGAAGAGAAATCTGACCCATGAGTTTCACTACATCAagtcttctttaatgcttgctcttccttcttctactccaggaacca-----agatgcaactaaagattttgtctctagcctttctatcttccttttatacacttcctactcaattacctcatacattccctaacttcatctatctctgtatgcagagaattttcacatttaaatctgtagtcatagctac-acctgaactctaccctatatttacagctctgtgttggagataagcactggcgtgctcttctgaatctcaactgcattccatcaaaagtcccat-------tcattatctttt---ctccaaaacagtttttatcctacctttcatatatctgataaaaacaaaataaaactctctttgtggtcattctggagt a score=22392 s mm7.chr15_random 4387226 825 + 7075849 AGAAGTTGAGTATATTACCAATTTAAAAGCTTCCGGTTTTAATCCCTCCATT-----TTATGACTATC--GGTAAGAGTTGTATATTCTCCTATG----------------AGTTTCACTACAGAGAATGTATTCTTCTTCTGCCTCTTCTCCTTGGGATGGCAGATGGCTATTTCATATCAATCAGCTGAAGACTTCCCTTCTGC-TACCTCATTGTTCATGAGC--------AGAGCAAGCTTGGAGCCAGATTCCGTAAATACCTGTGTTTCCTTCTAGGCCTAACCTCATGGGCTAGTCTACGAGTGTGTATG--CAAAGCAAATCCCAGACATGCAACATGACAAGATTTTAAACCATATCATCCCAAGTGAAAATTACTCTATCAAGTATATGAAGCCAGCATAGATCAAAAAAAGATATGATTATA-----ATGTTTCCAAAGTCAGGAGGAGAAAATGGCATCCTGCTTGGTTTTGTTTATATAACAAAGATAGTTACCTAAGAGAAACTCTGGTGCTTCCTCAAATTCCAACTCATCATTGTTCAACATGATATTTCTAGGCAGGTCAGCCAAGATCAAGTCCGGAGCAATCTGGGATATTGGAATAGTGAGCCTTGGTTGGTCTGGATTTATTAACAGGTCTCCTAAGAAGTATGTAAAACattattttaaaaaaaaaatttGTAAGGGTATACA-AAATTTGTGGTCCTGGCTTAAGAAGA----CACATTTTGAAAGATTTTTCTA--------------------CTAGACTTAGATTTTTCTAGAAAAACCTGATAAGCTCATAAAATATTACTATTAATGTAGTTAGAACTTTAAAGACACACTCCTCGGTTGACTCATTGTGTGGAAGAATTC s bosTau2.scaffold3032 74710 864 + 93130 AGAACTTGAGTACATCAGCAATCTAATACTTTTGAATTTTTAAACCCAAATTGGTTTTTGTGACTATTTTAATGAAAATTTATGATTGTTATATAGAATAACATAACTGCCACTATCACTGCATAGAG-GTGTTCCTCCTTTATTTCTTTT--TGCAACTGGAAAATGGCTGA-----ATTACTCCTCTGAAAATTTCCTAACTGCCTTCCCTATCACTGACAATCGAACAGTTAAAACAAATGCAAGGACGTGTTTCATAAA-ACCTGTGCTTCCACAGAGGTGGAAAC-------CTAGAGTACAAATGTGTGTGAGCAAAGCAAATTCCAGATTTGTAACA---CATTACTTTAAAATATATTATCCCAAAGGAAAAACATTACA-AAAATATATGAAGACACTAAAAACTATGACAA--TTAAATTATATGTGAATATTTGCTAGATTATAAATA-AAAACCGTACCCTAATTTTTATTCTCAAACCAACAAA-ACAGTTACCTAAGAGAAACTCTGGAGCTTGTTCAAATTCCAGTTCATCATTATTCAACATAATATTTCTAGGCAGATCAGCCAAAATCAAATCAGGAGCAATCTGAGATATTGGAATTGTGAGCCTTGGTTGATCTGGATTTACTAGGAGGTCTCCTGAGAAGTACATAAAACATTTTTTTTAAAGATAAACCTTTAAGATTGTACATAAATTTGTCCTTTTGATTTACAGAAATAATCACATATTGTCTATGCTTTCCAATCACTCTTACGTTCACTTTCCAATCTTATTTTTCTCTAG-AAAATTTGAGAATGTTTTAAAAGTTGAGTTACTCTCTATTTGGAAGTTTAAGAACTCATTCCTAGGTTCACTTACTAGAAAGTAGAACTC a score=16151 s mm7.chr15_random 4389691 240 + 7075849 AGAAGAATTTGTGAATTGTGTCAAAACCTAC----CTTCTTCAGCCTTCTTCATCAACTCATCAAGCAAGATCTTCTGATGTTCTTCACCATCATTAAAACTGTACAATGCCCATTTCTTCAACAGAGTTTCTCCTTCCCCACAAATGTCAATCTCCAGTAACCCGGGAAACCATTCTTCCATGAGTGAGTCAATATGATCCACAACTCGGCCCAGAAGAATACAACCTACATTag--agagagaa s bosTau2.scaffold3032 75960 246 + 93130 AAAAACATTTGTAAGTTGTGTCAACACATACATACCTTCTTCCGCTTTCTTCATCAAGTGGTCAAGCAATATTTTTTGATGCTCTTCACCATCATTAAAACTATATAATGCCCATTTCTTCAGCAGAGTTTCTCCTTCACCACAAATATCAATCTCCAATAATCCAGGAAACCACTCTTCCATGAGAGAATCAATGTGGTCCACAACTTGGCCCAAAAGAATACAGCCTATGTCATCCAAAGAGAA a score=17575 s mm7.chr15_random 4395148 831 + 7075849 AATTAATTTCCTCACCTTTTCTACAAGACGGAACTGTGATTTTCAAGAAACTCTCAGGTCGATTGTCTAAGACTTCAGAGCCTACCAGACAGTATGCTTCTGGAGACCAATTCAAGTAGATGCCTTGCCGCCAATACATCCTGTTAGGGCGTAGTGCTCTCTCTGAAAG-------------------------------------------------------------TTTAAATAGATCCATATGCATCCACTGATTACTAACTACTTCATTAACTAAAGGGG----GGAAACTGCCACTTATACATTAAGTAAAAATAAT----ATATATTTGTTTTGAGATGAGCATGCATTAACTTAATTTTGAGACCTTCT---TCAAACGGA----TACAAAATATTTCCTTAATATTTCAATTGTACAAGTTAGTTACTTTGTATACTACCTCATATATAGTACAAACTCATGAT---ACACAGTTTGACATGGttaatatat-----aaataatcataaataagtttttagtcttttttttaaaaaatCAATTCTCATATTAACACCATTCTTGAACTTTGAAGTGCATTTTAACTACCTTTTATATTCATTGATACCAAGAAAGACAAGCTATTTTTCAAAAACCAGTAACACTTGTGT-CATCTTTTGTCCAACACTCCTCCCAAATATT---------TCCCTGTAGTGTTATAATGCTCCTTACTTTGAAAATAAAG--------------CTTACCATATACACATAAT------TTCACCCTTTCTCTAAAGTCCCTGAGAGAT----GAGCAGAAGAGAGCGATCAGAGTTCTTCTCTTAAAAGGCCAAGGCCTGTTATATTTGCTGAGGAAAAGCCTCTAGTT-ATACATTGGTTATTTTCATATTATTCTTTGTTGATTtgtacatgtgtatgtatatgta s bosTau2.scaffold3032 76312 937 + 93130 AATTAATTTCCTTACCTTTTCTACAAGAGGGAACTGTAATTTTTAAGAAACTCTCTGGGTGATGATCTAAAACTTCAGATCCTACCAAGCAGTAAGCTTCAGGAGACCAATTCAAGTAGATGCCTTGCCGCCAATACATCCTGTTTGGGCGAAGTGCTCGTTCTGAAAGAAATTTCGGTTCAGTTCagtcgctcagtcgtgtccgactctttgcgaccccatgaaAGAAATTTAAATGAACCCAAATATAGCTATTAGTTATTTGTTGTTGCATAAACTGTAGGGGAAAAAAAAATCACTGCACATATTACAAGTGACAGTAACAGAGATGTATTTGTTTTGA-AGGAAAGTAC-TGGAATTGTTAATGATATATTATCTGTTAAATATAATATTACATATTTTATCCTCAAT-TTTGAAATGAAATAAACAAATGCCCAGTAGATTACCTACGACAGATTTCAGGTTCATGGTGTGAAGCAGTTTAACATATGTAATAGATGAAAAAGAGAATCATAAACAGATTCCCATAACTTTTAAAAAGAGGTTGGTGGTAATGCTAAAACCA-----ACACTTTGATGTGAG--GTAACTATC-TATATGTTGATTAACTGCAAGCAAGATAAGGTTTATTTCAGAATACAGTACCATCTACATAAAGCTGATTTTAAGCACAAAACAGAAAAATTATATGTTCCCCCTCGGAGCATTAGGATCTCTCTTTCTTCCAGGAGGAAGAGCTGGCATTGTAACTTATAATTATAGCATGATAAAGTCTTTATTCTTTTTTGTAAACCCCCCAGGGACCATGCAGCAGAATAGAGCTATTGTAGTCCCCACAGAGAATGGTTAGGACCTGTTAC-TCTATTAAACAAAACTCCCTGACTGAAGGGGTGGTCATTTCTAGCTT-TTATTTCTCCACGCACGCATGTGCATTTGTGTGTA a score=14660 s mm7.chr15_random 4396500 459 + 7075849 TGTGTAAGAAACTGTGTGTGTTGAATGCTTAGACCAATGGCTCCCACTATA-CCCCTCCCTTTAAAATGATTGCTTCCTGTTTCCCAAGTCTTGGGAAGTATAAC-GTCACAGCTGATGCAAATATATCTAATGTAAGAAC-----------TAAGACCTTTTCTTCCAGAAAATTGCAGAGGTTG----GTGCATGCTCATGTGTTGCTCACGCT---------------------------------TGTCTTCCAAACAGGCTAACTCTGGGAAA-TGCCATGCTCCTCTTAGCA---TTTCTTTCAAGTTTGTCCCAATAGTAG--CTTTAGGAAGTACATACCTCTGCCAGAAAGCATGAAGGGTGAGATTTCAAGTAATCGGTTAATCAATCTTGACCAAAATCCCATGGGAAAGTACGGCATTTCGTACAGCCGGATGATGATCTCAGAGTTCTCACAGTGGGGGAGCTCTATCACTGGCCTGTGGTCAGACAAGCTGCAAAGGACAG s bosTau2.scaffold3032 77249 504 + 93130 TGTGTAGGGAGATAGGTGTTTT-------TACGCCAATGACTC----TGTAATTTCATCTTTTAAAATTGCTGCTTCTAGTCTGCTTTGGTTTGCAAAGCAAGATAGTCATACACATCGTAAATGTGTCTAAAATAAGTACACATGGACTTTGAGGAATTTTATTCTTAGCAAATTTCATGAATTTATCCGTGTATATTTTTATATTGGCCATGCTGAGGTCTTTTGAGCTTATTTCCTGATTTTCAGCTGCATTATAAACCAGTAAACTCTAGGAAAATGACATATTAATTTTAATACGCTTTCTAACTATCTTCTCCAAATATTAATTCTTCATTAAATACATACCTCTTCCTGAAAGCATGTAAGGTGAAATTTCAAGCAACCGATTGATTAATCTCGACCAAAAGCCCATTGGAAAATAAGGCATTTCATACAGTCGAATGATAATTTCAGAGTTCTCACAATGGGGAAGCTCTATTACAGGCCTGTGGTCAGACAAACTAAAGATAAAAG a score=5756 s mm7.chr15_random 4397042 298 + 7075849 CCTGGTGGCCTGAGCTTTTCACTGCCTCAATGCCAAGGAA---------ATAACTACTCCAGACAATGGCAT--TTTAAAAATATTAATCTCTTGGCATATGATCTTC-TACATCAAGAATTTGGAGGTCACTTCATCAACTCAAATATATGCACAGATGGAGTAGATGGATAAAAAAAATACAATAAT---GTGTACT-----AATACATTAAGACAATTAGT---GCAAAGGCAGATATTAAGATTACGGAAAACTTGAATAAATACGTGTCCTAGAAACAACTACATATCTACACTTGGAATTGGCTGT-ATCCATTAA s bosTau2.scaffold3032 77789 310 + 93130 CATTTTGACCAGAGTGCTTTACTACTTGAA-ATCAATGAACTGATGATGATAAATATTCTAAGCAATTTTATCTTTTAGTAATGTTA---TTTTGCTACATACTCTTCCTACTTCAA-AATTTAATGGTTA----ATCAATTCAAAT-CATGCTCAGATATAGT-GATATATAAAAATTTTTCAGTAATCCTGTTTACATTATAAATAAATTATTATAGTTAGTTATGTATAAAAAG-TAAAGGGATTATATAAAACTTCAAAAAATGCATGGCCTAGAATCAAGTGTATATCTGTGTTTAGAATTAGTTACCATCTATCAA a score=22652 s mm7.chr15_random 4397445 1069 + 7075849 TCATTTAAACTCTCTTGGAAACTCAC--TTTCCCC---------CTTAAACTTCCATTA-TACAATATAAGTGCTAAATTGCCAAGTGAAGATGGATGCACACATGCACACACTG--CTTTACCATTAATCTGTACCAAAAACAATGTGCAT-GTTAAGCCAAATAGCCACTATATG--CATGAAATCATTTATC-----CTTTTAAATATTAATCAACTGCAACTTTTCTTTTAAAATATATGTCATGTGTTGCCAAAAAGCTTACCAAAGCTGAAAGTTAAACATTAGTGTATCTATTACAGAAAAAAAAAAGTTACTTTGTCAACCAAAATAATGTAATCTGGTGAATTTCTATTGG--------ATTTTTAAGGTCTGTCTTACCTGCTTGGAACCAGAAGATATTCTTCCCCTATTGGCAATGCGATCTGAAATTTTTCTAATAGTTTAAAGTATTGCATCATATAGTTCTTCGGGAATCGCTTCTTCTTTGAAAGGAATTTTTCCACATCTCTCCGGGAAATGATGCCCTTAGGATGTTTCAGACAGCCGTCTACCTTCACTGTCAAGATCTGAAAGATTCCAACT----CACGATCA---------CTGTCTAG-------------------------------------------TTAGAACA-----------GTCAGG-------CAAGATCAAATT--TCTGCC--GCAGCCAGAT-AGCCTGGGATCC------------------CACTGGGAT-------------------ATCGAGTTTAGAAGCATTTGGAGA---------ACTAAAGAG---------------AATTCAG--AATTC-TTGGTCCCAATCCCAGCACTCATTCTATAGTCTCATCACAGGCATATTCCTATACATTCCTAGAAATTATTGTCTAAATAGTCACC-TGACAGGTTGACCATATAGA------TTGACATTTCCTTGACAGG-AGTCAACTTCTATCAATGG-AAGAGAGGTAGTATGACCACTCC-----------------TGGTTACAGGCTTCCACTGACCG------AACGTGAGTTAGTAAATCAGAAGAGAAGCAGGAGAACCTGC-CCTCTAACATAACACCTGGGAGAATTCAA---------CACCATTGAAGCACTGGATATTA-CTTTCCAgttaagaatatgaaggtggctccaaaggacctaagtccaaattcaggctctaccactggctgtagaatcttaggaaaggtagttactgttttt s bosTau2.scaffold3032 78189 1254 + 93130 TTATTTAAAGACTGTTGAAAACTCACCATTTCTCCAGAATCTGCCTAATAATTCCTTCAATATCATATAAGGAacatacatacacacacagcaacacacacacacacacacTCTAATCTCCACTATTAACCTTTCTTAAATAAACTGAGCATTGTCAAATCAAGTAATAATTATATAGATATAAAATCAGTCATTTACATCTTTAAAATGT----CAAGTGTAG-TTTTCATCAAAAGAAAATGTTATACTCCAGTACAAAGTTTACACAAGAAAAAA----AAAATTAGTACATTCATCATA----AACCAAAGTTACTTTCACAACTAAAAGAATATA---TGGTAAATTTCCATAGGGTAATTAAATTTTTAAGTTTTGGCTTACCTGCTTGGAACCAGTAAATACTCTTCTCCAATTGGCAAGGCAATCTGGAATTTTTCTAGGAGTTTAAAGTACTGTGCCATGTAGTTCTTTGGAAATCTCTTTTTCTTTGAAAGAAATTTTTCCACATCTCTACGTGAAATAATTCCCTTAGGATGTTTTGGAAAGCCTTCCACTTTCACTGTCAAAATCTGAAAGGTTTAAACTTATACATAATCATAGAATTCGTTTTCTGGGAAGTTCTGAATTTAAAGAATTTCCTTTGCTCAGTACAAATGATCAAAACAATTCTAATGTTGTCAAGTACAACACAGGACCTAATTTCTCTACCTAGCAGCCACGTAAGCCTAGCATCTTTCACACACCTACTTACACACAGAAATTATTAAAATAAGTGAGTGAATCCAGATCAGAAACG-ATGGAGATCCTCTGATACCAATGAACCACAAGCCTTCCCCAGTTCAATTAATACATCAGTCTTTTGCCCCACATGCTTATTACAGTCTCATCAATAATATATTC--------TGGAGGAAATTATCTTCCAGGCTGTTATCACCACAGATTTGCAACAGAAATGCTGCTTTACATTTATACAACTGGAAGTGGGTTTCCATTAGTGGAAAGAGAGGCAGCTTAGTAAATTAAGTGATTCTCAAACAAGTAATCACTGAATTTCAGTGGACTCCatgcagtctgagtca-taggtcagggataaagcttgagaatctacttttttaacaagAAACTCTGAAGATTCTAATGTGTAGACCATAATTTGAGCTTTGATCATCATcacagcaattaaaaatatga-----gttgagaagaattcaggttcaaatccaaactctactgccagttgtatgaccttgagaaaggtatttaatttcttt a score=7374 s mm7.chr15_random 4402830 219 + 7075849 AACAATTCCTGCCCTTGCCTCAGTGACTCGTGGAGGTGAATACCCCTATATATTTTTGCAGA-TGAGTATCAGACAAACTTGCTCTTATTTTTACATGGCTATTTATGG-TGTTATTCCCTT--------------------TATTTCAATGTATCAATACAAACAAAAGCGATAGCTGTCACTTCTTTGGTAACAAGAAACTTAAATTACCATTTTTACTGAAAATTTAA----ATCTTCCAAA s bosTau2.scaffold3032 85624 228 + 93130 AATTATTTCTGCCCTTGCCTTGAGGATTCATGGAGGTGAATACCTCTATTTATTTTTACTGATTTAGTGTCAGGCAAG-TCATTCTTGTTTTCACTTGATTACTTATAGCCGTCATTCTCTTTAAACCTTAGTAAAATAACATATTTCAATATATCAGCATAAATAAAA-TGAT-----TTACAT------TAATAAGAAATTTAAATCAC----TTTACTGACCCTTTAGATCCATCTTTCAAA a score=5361 s mm7.chr15_random 4404118 397 + 7075849 TTAAATTACAGGTCAAATCAGTGCTAGATATAAGG-----CTACCATTTATCTCTCACTAACTTTAAGTTAGGGAAACAACATGAAAGAAAATATAATTGTCCTTATT------TAAGAGAAGGCACAGAAGTTTAAAACAAGAG--------AAAACTGATCA-TGCATAGAAGAGAT-------------GTCCTCAATCCAGAGACTGTGCCCCTAAGACAGGGCACCAT----------TTCATACACAGTCA----------------ACTCATGCCAT---CTGCTGCACTTGGACAGAAATGTGGAAACCAATTTAAGTATATCTACCATTAAAACAGACACATTGCAATAAATGTCAATTAC--ACTG--ATGTTGAAATGTTCTCTCCAGTGCCCGGGTATAGGATTTAGCCTCAACTGAGTTTCCTCTTCAAAATCAGTTCCCTTTTATCTTT s bosTau2.scaffold3032 86367 437 + 93130 TTTAATTAC----CAAAT--GGGTTAAATATAAAATTTCACTAAAATTTATTGCTCATTTTTACCAAACTACAAAAGCAATGtaggagataatattgttattattgttattttacaagggaagaaacaaaggctgaaaacattaagcaatgtcaaagttgataagtatttaggagaaatttgaacacaggttgtaatgactctagagtttacgctt--------gaccactgtattTTCTGGCTTCATTCTCATTGAGTAGATAAGTAATATCACACTTTCCATGGCTTATTGCATTAGGGTGAAAAT-------CTAATTTTAAAATATCTACCAGAATATTAGCAACTGTCCAATTACAATTAATTGCCAACTGTAATGTTTCAATATGTTCTCAGGTTCCATGGTATAGGGTTTAGCACTAAATGAGTTCCCTCTTTAAAATAA-----CTTTTTTCCTT a score=6460 s mm7.chr15_random 4404515 515 + 7075849 AAATAGATTTAAGCAGTACTATTCAAGATTACTTAGAGAAATTCAATTAGCATTGTGGTTTAAATGGGAGAGACCTAGCCAATATGAAAAGAGATAATCATGTTAGAGACTTGGGGAGCCATGTGTAAAGCTGCAAATTATGTTCATAAATGAAATAATGGCCAATGAATGTAAGAGCTAGAGGCCTCGTCCCTGAATTCTTCTGAACTATGGATGAGTGAAACACAGTGGTCCTTAGCTGTGGCGGCCCTGTATGACCCTACACTATCTTGAAATGTCCAGACAGAATTTTACTTGCCAACGCTGAGATGGTAC--------------------------AGCTATA-----GTCTAGAAAGTAGGTTGACAATATGATGCTATCAACCC------TACCGAAAAGACCCACT----------------------------------------------------------ACAATTTTTTTT-------------------TTTTGGTATTTGTTCTACATAAACTCATTGCTAATGTACTATTATTG---GGAGTTATTTTCTGTGTTAAACATGAACAGAAAACACAATAATCACCAACATAGCTTTCAAAAGTATAAATAGCTGGAG s bosTau2.scaffold180 2602 588 + 666311 aaagaaATTTAGGAACTATCACTCA-GATTATCTGAAGGGATTTAATTAACATTGTGG-TTAATTAGAAAAGAGATTTCTAATGTAAAAAGATATATTTTAGT-------------------------AACTATAAATTACACTTATAAGAAAAATAGCTTCCAGTGAGTACACATGCTGAAGACTCCCTCCCTAAGCTCATTTCAATTC---ATGATTCATCCAcagtcgtcctcc-ccaaggtgattttgtact-tcctaaaatatttggaaatttctgggtacatttttgctt-ctcatactgggaaagtactagagggtagaggccaaagatgtagacgccatactggcgtctagagggtagaggccaaaggtgctgctatcctcctacaatgtacaacaaagaattacctgcccccaaatgtccatagggctgacattgaggaaccctgAGCTAGTGTGTTGTTTGAATGGTTTTCTGTGGCAAATCTACAGAGAGGATTATGGTAGCTAATTAATATAAACTCATTGGTAACTGATTATTATTGATAGAAGAAATTTTCCATATGAAATATAGACAG------CCATAACTACCAC-----TTTTCAAAATGCTAAGCATTTAGAG a score=9621 s mm7.chr15_random 4405397 320 + 7075849 AATCTCTCCCAGCC----AGTCTTC-CCTGTCAAGTGGTTCTTTATATT-------CACAGTA------GTCCCAGCCTTCTCTGATCAAAAACACTAACATGCTAAATTCTTTGGGTAACCCCTACTCTGCTCTTCAACTGTTGCCTCTAGTTCCCCAAAG-ATAAAACACCAACCTGTGCCATGACTTTACAAAGCCACTTGGGTTCCACAAAGTACAGGTCACTTAGCTGCAGGGCAGGGTCTTGAAAATGCAGAAGAACTCCTGCAGTGGAGAGTCATCAAGCAGTGAGAAGTGGGATGTGGAAT-----AACACAAAG-----CCCCAGAGACTCCAGTGTAGC s bosTau2.scaffold180 3979 321 + 666311 aatctttcccagcatcagggtctttaccaatgagttagttcttcacatcaggtggccaaagtatttggagtttctaccttaacTAAACACAAACTCTATAAACCTCAGTACTCTAGGT-----------------------GTTACCCCCATGCCTCAGAAGTATAATATACCAACCTGTGCCATGACTTTACAAAGCCACTTGGGTTCTACAAAATATAAGTCGCTTAACTGCAATGCTGGGTCTTGAAAATGAAGAAGGACCCCTGTAG----GAAAAATCAAA-AGTgaaacatggaatttggaatatgaaaatatcaaggggcttcacagagaatctagcccagc a score=30811 s mm7.chr15_random 4406232 1133 + 7075849 ACCACACCAGTGATAATGCTT------ATATAAAAGCAACATTCACACAAACATGAGTTAATGTAA-------AAGGATGTTGTTACATTGTTGCATTGTGAGTCG---GGTGCCTCATCATAGCAAATCTGGGTCCCAGAACCCATATGTCTTCCTTCATTCCCACATAAGGATTCTTTCTTACTTTGTCCTTAGAACATTTCTAAGTATACATTTTTTTTTA-GATACGGTATATGATTCAATATTCATATACATGGTGGCGTTTCCAATAGAAAAGATCCATCATTGACCTGCTTAAGAATTTTATTGACGTTCTCTTAAATTTTGAATACGGATTACACACAAGGTTCAGATATCTCTTCA--AACTGTCATGGCGGGACACTGGAGACCAGAACCCAGGGTG-AGCATACGAACCCGACTCATTTAGGAAGTGAACGGCGTGTGGGAGCTCGTTCTCATCCAGCTGCAGCTGATGTTCGTTCACGAGCTGTAACAGGTGTTTCCGGTTAATCACAGGAAACTCAGTCGGCACAGCTTTCCGCTCTGATAAAATGATTTTCTCCAGTTCTACGTAGCAATCTGGAATTAGCTGCCCAACCACAGGCTGATCTCGGATCTATGAAATTACAAATGACAAGGTGTTAAAAAAAAACTATTTAAATCACAGATAGGT----TATATGGTAAATTCAGCCAAAACAGTTTTTATGCGGTGCACATGGTTTGCtttttttttttttaataaaatttaaatatGATACATGATGTGAAACCTATCTAAATGGTAGTGAACAG--AAGATGAAATT----AAAGTAAGAAATTTATGGACATAG-AGTCAATTTGGAGGGGAAAATCTGTGAATAAAATAGCATGGAAATAATTATCTAGTAATACAAAAATTCTATTTCAGAAATAAAGGCAAATAACTAACCAAGAATGAATGATCT--CATTTTGTAATACACTGAGTTAATATGCAAAGCACCGGGGTGGGGGTAAGATATAAGTC--TATTATGAAAGCTTGGGATATTTCTTTCTGAGATAAAAATAT----AACCACAAGTA---------------------------------TTGGACTACCGAACTGTAGACATCAAGAGTTAGAACTGGAAACACA----ACATCTCCTCACCAAGT--TGTTTTTTCATGGAATTTGAAACTCTGGAAAAT s bosTau2.scaffold180 4416 1133 + 666311 ACCATCACAATAATAATTCTCCTGCAAGTGTAAAAATAACTTCCACATACAC-TAAATTCACTTGATACTATGAAGGATATAGCT-------TGAACTTAGAGTCTCACAGTTCCTGA--ATACTACAGTCAAGCTCTAGAATCCACGTGTTTTA----ACTCTGGCTGAGAGACTTTTTCCACTACTGTCCTTAGATAATTTCTAAAT-----TTTTCTCTTATGACATAATATATGATTCCACATCAGTACACATGATGATCTTTCAAAAAGAAAAAA-ACATCAGCTACCTATTAAAGAATTTT-TCAATATTCTTTTAAATGT-------AAATTCTATACAAGGTTCAGATACATTTTCACCAACTCT-ACTGCAGAGCTTTGAAAA---------AATATGTAATAAACAAACCTGATTCATTTAGAAAGTGAACTGCATGAGGAAGCTCATTTTCATCTAACTGCAGCTGATGTTCTCTCACAAGTTGTAATAATCGTTTCCGGTCAATTACAGGAAATTCAATTGGCACATTTTTACGCTCTGATAAAATGATTTTCTCAAGTTCTACGTAGCAGTCTGGAATCAGCTGCCCAACAACAGGCTGATCTCGGATCTATGAAATTACAGATGACAAGCTGT----AAAAATCCATTTTATACATCTATGTGTCAGGTAGTTGGTAAATTCTGTGCTAATCATTC--------AGAAAATGA----------TTATTTTTAATAAAATCAAGATGCAATGTAAGA--------CTAATTGAATCGTGAGAAATAAATAAGATTACCTTAAAAAAAGAAAAAAAAAAATGAACACAGAAGCCAATTTGGAAAGAACTATC---AAATAACATTGTATGGAAATAATTATCAAGGTATTCAGAAAATCCATGGCGAAATCCAGGACAAATCATTAACCTTAAATAAAGGACCTACTATTTTCTAAGACATTAAATCTACAGGCAATAGAT-------ATGCTAACATAAAGGTCAGGATTGTAAGAGCTTTTGGACTTTATTTTTTAGATGAAAATATCCACATCCGAAAGTAAAACTAAATTTTGTTCTTGCTATTTGCAAAATGTAATATTAGTGGGATGTACATATCAACAGTGAAGTCTGGAGACAGACATGAAATTTCCTCACCAAGCTATGCTTTTTCATGGAGACCTGAACTTGGAAAAAT a score=17524 s mm7.chr15_random 4830973 864 + 7075849 CATAAAGGTCAGATC-AAAACCTTTTAACCTGATGACATTAGC-AAAGGAACCAGTATATCAT-GATGCTCAAATACTGAATCCTG-GCCCTGACAg-------aggaaaaaaagaagaag--accaaagaacagagac-------aaaagataaaaaacaaggaggtgtggcatgctggaagaaaagaagtgtttcagagagtaggatctgtttaagtgtgtcaaatgttgctgctctttcaagtgtgatacagccagagCAGGCTGCAGACTGAGTTGAAGGTGCAGGCATAATAATGACAAGTGTGGCAGCCTGACCTAAATTTTAACAGTGGATATGAAGTGAGGGAAGTGTTATGTGAGGCATTTTGAAGTGAACTTTTAAAGACAAGTAGACTGGGGCAAGCTGTCTGATTACAAGTATACTATGAGT-CAAGGGCATGATACTAATGGCACTCTGGGATGTGGCTTAAGGGCACAGGTCATTAAGGAG----CCTCAACAGAATGAGAAGGTCTGGGTGAAGATCTCTGAAGAGTGTTAACTACTGCCTGGATTAACCTTGATGCACTCAAGGAGTATCA--GGAAAAAAGAATTATGGATAGTTGAAGAGGCTGCACCATCTAGAAAGGTCTTGGACTGACAAATGAAGGTAATAATTACAATTTCAAAGAGAAAAGTGAAGCTGATCTCACTCCTGT--AATACACCAAAGATACTCCAATTATTATAATAAATGCTCAAAATTGCTCTTGATTGAATCTTCATTTCTTGAATTACACATAAAAGGCTACAAGAGTTATCTTTTAAG---GAAAGT--ACATGAGA------TAAAAAAGAATCAGTCTTTCTGATC-TTAATAAATATTACAGGA-AACTGGCTATTTTGACAGAA s bosTau2.scaffold1395 224491 841 - 248814 cataaagataatatctaaagccattaagactgatgatatcagccaaaagaataagggtataaaagacgctcagttagtgaacattgcaacatgccagtgagtttaggagaaaatgcagaagcaacacagaaacagtgattattgtgaaagggagaaaaccaagagggtgtggcatcctg----aaaaaaagtatttcaaggaagagaaagggatccagtgtggcaaatgctgtggctaagtcaagtacaatgT--------CAGG-----------------------GACATCATAATGTGAAATGTGACAGCGAGATCTAAACTC-AACAGTAGATACAAAATGAAGAAAAGGATATGTAAGGAATTTTGGAGTACATTTGTAa--------------ggaccagatgattgatggaaagtagggtgggagggaaaggaaatgattcacatagtgctcaggcttttagcttaagaactt-ggccagcggggggaagccctctacaagatgaggagtataagacaaagatctgtgaagagagttaattcacggttattttgacttttatgtgcttgagagctgtctatgtgaaaaagagt-------agttgaacacatggcgtt-tgtagaaaggtct-gggttggtgaGTCAAGATAATAATGATACTTATAAAGAGATGGATGGATATAAACTCGCTCTTGCCCAACATAATGAAGAGAGTGCCACT--TACAATTAATGGCCTAAATTGTTCTCTATTGAATCTTTATTCCTTGTATCCTGTATTAA---TCTTAAAATTTATCAGTCATGACAGAAAGTTTACTTAAAAGGCAAGTGAGATAAAATCAATGTATCTAACCCTTAGTGAATATAAAACAATAAATAACTATTTTGACTGAA a score=27606 s mm7.chr15_random 4831929 1471 + 7075849 TCACTAAACTTACTTTTCCTCAGTTTAATTATTTGGAGGACTACTAGCCTTATATAGTTTAAA---CCTTTGA--------AAAAAAACAGACAAGATATTCCAGTAATGGAGAATAATGTTAAAAAGAAATGTATATACTAATTCAAAAGTAAGGGAGATT----ATTTTTTAAAATGATGATATCTGCTTAA--ATATATGCATATC---------------TTATTTGGCTAT--GTGTAGGCC---ATTTGGTGTGCTGAATGATACAATATATCTGGCAAGAATAGTTAGTATTTTATAT---AAAACTTTCCATGTGGTAGTTTTGTATTTCTC------TGTTTACATTGCTTAATGCAACATATAAGTTTAATGGAAGGATTCTGTTTTTAATTTTTAAGC---TCTGTGTGTAAATACTACTTTGATTTTTGTCCCCCAAATGTTTCTGTTATGTGAGGTATCCCCAAATGATGAGGGTGTAGGGCGACTGCTCGCCTCTCTCATTTTCAGGTGAAAGCCTTTCTTCCCTTGCTT------ACTGGCTGGTTTGTAATTTACAATGT-------------------AGAATTGCCAGGAACAGAATCAGGCATTTAAGGCAGCCTATACATCAAGTAGAACAAGTAATGC-TTAATGAA-GCAATGTACCACAA-ACTGCATGCAAGGTTCTGATTCCATTGGCCTACCTGAGATTTCTTCGCCATGT-GTTATTTATGATTTGAAGAATGATTTCTATTAGAACACAAGAATCTAACTAGGAATGATTATGAAACAAAGCCAGAACTTGAAAGGCAATTATCAGATCATATAATGGCTGAGGGAGGAAG--TAAATAAGGCATTGATTTAG--ATTTTTAGGCACTTTTGTATTAAAACAAACCTAGAAGTCACGCTAATTT-GTTGATTTAGCACCCATCACTGTTTATTTTCACCCTATTCATTCTTAAGGTTCCAAAGAACCTATGACTGTGTTTCTACTGACTCAAACA-CGCCCCTCACAATTAT--CCCGAAGGTCTTACCAAGACACTGTTTG-GCCTCATCTTCTGTGGCATTTCCCTGT-AGAAACATTTGTAAGGGGAGTTAGCTAAAGAAGAAACAACAAATGCAATCAGACAGAAGCCACAAGTCTGGGATGCCTCAC-CATATGGCTAATTAGGATACTGTGTGATGGAGGAATATG--ATATTTCTACTGTAAATCAGCAGCAGCAGCACAATACACCTG-----------------GCATGAGAATCTTTTTTCCTTTACCTACCTTATACAACTTCAAATTTAGGCTGATTCTCCTCCACCTATTGCATTTTC---TTCCTGGGTAAGAGCATCACATTCACTCAAGGCTGCAATTTAAGAACTATATCTTGTTTCTTTAA--TGCCTTTTGAGATATTCACTCCAAAGTCACTGGACCAGTTATTTCTCAAATTCTAAAGATATTTTCAAAAGTATATGGACTGTGCTGAGAAGGTTC-CTATAAACCACATCAATATTCAGAGTTTTGTGGAAGG--TTAAAGACCATATGGAGAACCT s bosTau2.scaffold1395 225438 1533 - 248814 TGACTACACTGAATTTTCCTCAG---GAAAATTTGAAGGATTTTT---CTTACACAATATAAAGATTATTTTAGGACACTTAGAAAAGTAGGCTACATGCCCCAAAATGGGAAGAAAAGGATTTACAGAAAAAAAAATAATGTAAGAAAGGGGAAGTAGATTTAATATTTTTT----------TAGTCACTAAATTGTCTATCCACATCCTTCTTCAGTCATTATTAATTAGCTATCAATGTGGTCCTTCATTTGTGAAGCTATATCCCACAAGATATCTGGCAACTAGAACTAATAAAAAATATTTGAAAGTCTGCCCTATTGAAGCTTTATATTCTTAATGTCATTTCTACATTCCCTAAAGTAGCATTCAGGCTTAAT--CAGAATCACTGTTTTGGGTTTTGTGCATATCTATGTGTT-------CTCTCGTTTTGAAGTTATGGATGCTTGTGTTCTGTGAGGCGGACCAGGTTCTTACAGCTTGGGAGTGGCTGCTT-----TCTAATTTTCCTACTGAAGTCttttttttttttttttttttAATTGAAGCACTTGCCATTTGACACGTTCTCCTTTTGTTTCTTACTAGGACAACCAGGAA--GAAAGAGAACTCTCAGGTGGCCTATGGAATAAGTAGAACAAATACTGTGTTAATTAATGTAATATATTGGAAGATTGAATGTGACAGTCTGGTTTGCTGGAAATATTTGAGAATACTTC---ATATAGCTATTTAGAATTTGAAGAATAAGTTATATTAGAGAACAAGAAAATAATCAGACAGGATTACGGAACAAGGATTGAACCAGGAAAAGCATTAATATGGCAAATAATGG-TGAGGAAGGAAGGCTAAATGAGGCATTGATTTAGTTATTTACAGACTTTTTTCTATTAAAATAAACCCAGAAATCATATCACTTTTGTTGATTTAGCACTTTTCACTGCTTATTTTAATGCTGTTCACTCTTACAGTTCCAGAGAACCTATAAATGTCTCCCTAGTACCTCAAGTGCCATTTATCAAAGTTACTGCCTGCA---CTCACCAAGCAAGGGTTTATACATCTTACTTTGCAGTATTTCCCTTTCAAAAATAATTCTGAAAGAAATTAACTAAA----CAGCACCAAATGTGAGTAGAGGTGAGTCAAAAGCCTGAGATATTTCATGCATATGGACAATTGAAAAGGTGTATTAAGGGGAATTCTGACATATTTTGACATCAATTCAGAAGAAGTAGCAGAatatatatatatatatatatatatatatataAAACTCTTTTCAATTTTACTCCATTTA-GTAATTTGAGATGCAAACTGA---TCCTCAATCTGTC-CATTTTTGCATTGCTTTGTAACAGAAATTTGTCTACGTGAGCCCTTAATTTAAAACATACATTTTTACTTCTTAATCTATCCTTTGTGGAACCTTTGGCAAGGTCACTGAATCAGCCATTTCTCAAACTCTGAGGCTATTTTCAA------GCAGACTGGGTCAAGGGATTTTACTACATACCACAAAAGTATTCAGTGCTTTTTTGAAGGGCTTATGAACTGTCTTAAGAAACT a score=14156 s mm7.chr15_random 4838314 997 + 7075849 CCTTATTGCTTGTA--TCCATGCACTCTATTGAAGCATCACACCAACTCCTTTGTGTCCAGTCTTCATTCGGCTGGTGTCTCAGCATGACTCACAGCTGACAACAAAGATTGTTCTCAAACTGTCGGAGTCCACTAAGTACAGAACACAGTGTGCTCTCCTCTGTAG--GCCCATGTGCTCTATGCATTCACAGTGACTTAATTGGTCTCCAACGTGTTTCCTACTTTCTTGTTGAATATGAAGAAAAT---AAAAGCTC-ACAGGTCTCAGTATCTCTGATGTCTTTCTCTACCTTA-------------AGGCTTTCTTTCCATTTTGCCTT-------------TAAACAGAATTCAATCATAAAGCAAACACACCAGCCC-----TCCTATCTTAACAAATGTTAAACACAACCTATTTTACGCCAATTGCATTTTGCATATGAAAACTACAAATTTCTACCAAATTAGAAATCA-GAAAATAATCCAGTGGC--AATTTAATGATGTCATTAATTCAGTTGACAATGATTGGATTATGAGCTATGAAGTAACTCAGAATAGAAATAATTACAGAAAATATTTTTAAATTTGATATACTCAGAGATTAGAGTGTAATAAC-------TTCACATTTTGTAATCAAATTACTCCAAAGTGGAATATCAAAAGTAACCAAACTTTTACCCCCTCTTTTCTTCCTCTTCCGTTTAAAATTTGTGCAGTAGAGTAAGGTATAAAGGGATGGAGGAATTATCCATTCAAATTTATGGCTAATCGTCTTCTTTGGACATTTAATCATGTGATGTGCTTTCCAGT--GTAAATATTTACAAGAAACTTTGTGTGACAGCCCACTTTACTTGGTTTTTACTTGTATTTTGGGTTCTTGGTCTATCAAAGACCTGGCCAATAGGAAGTTCCAATGATAGCTTCAAGACATATTTATACCCTTTCCCTGAGATAAGCATATAGTGGCTTATAGAACTGTAAGCAATGCTAAGCTTGTCTACATTTCTAAAACCTAGTACTACATTGTACTATTT s bosTau2.scaffold1395 232214 933 - 248814 CCCTATGTTCTGTAGGTACATGTCTTCCACTAAAACATCACACCCATGTTTTTGCATGCATTCTCCAACTTCCTGCTGTCTCTCTCCACTTCACTGAAGGTTGCAAAGGTTGCTTT--GACTGCTAGAGACCTCTAAGTAGAGAAGATAGTGTGATGTTGTACGTAGTGGCTCATGCAGTGTATTCATTTACATTG-CATAATTACT-----------TAACTAGCTCCTTACTGTAAATAGAGACAATCACAAAATTTCTGTATATCTGGGTCCCTGTAATGTCTCTCTTCTCTATAGTAGGTTTATTATAAACTGTCTTCAGATTTTACTTTGCAGGCCTGTCATTAAATAGAATT-AATAAGGAAGCAAAGACATCAGCCTAATTTCCATATGTCAACAGATATTAAACACAGTCAATTTC-CTTCTATTACATTTTGCATGTTAAAAGAACAAAATTCTGACAAATTGGAAATCACCAAAATAATTCAGTTACTTTGTATAATGAAGTAATTAATTCtgtgagggttgactgcgttaatacatactaaat-gttcagaataCAAAGGGGTACGGCAAACAGTACCCAAGATCATGTGCTTACAGATTAAAGAG-AATGACCTTTTTATTAATGCTGAATAACTAAGTTAGTTTAGCCTGGATTAT--------ATCAAACattt--------ttttttt--------------aatttatttaG-AGAATGAGGCAATGAGGGAT---GGGACTATCTGCt--aattaatatttaa-----attatttaCCAGCTAAAGATATGCTGTGGTGAGAAATGAGTGAGCTCTTGGATGGAATTATG---------CTGCTCCAGTAACTTCTCACTTGTCTTTTGGGAAC---ATTAATCAAA-------------------------------TTCAAGACAAATT----CCTTTTCCCTGAAGTATACTTGTAATGTCATGTGGGAATTTAA-----GTTAAACTT-CCTATTTTTTC---ATCTATCATCATATCAGGCTATTT a score=21773 s mm7.chr15_random 4841436 746 + 7075849 GGAAAGATTGTACCCTTACAACCCCTCAAAGAGGAAGCCTTCCATTTTTGAAAGTTATATTAAAACATGAAACTACAGGAAGATGTGATAAACAAAGGGTTATTAATATAAGATTGAACCAGGTGATTTTCCTTCATTTGAAGAAACACAGCAAAACAAGAATCAAAATCCTGAGAGCAAGTAGAAATGTAAATTATCATCTGTCTTT-TATCTTCTACCCATCCTCCATCAACATTCACTACCTGCCCATTCAATAACTTGTTTCACTATTTTTTGGCTCACCTTGCCAACTACCTCTGAACATAATTTTGAAAAGAGAAGTAAAGGACATATTATCAAGTTCTAAAGAGTTCTACAGAATATAATTCTC-AACATAATTGCCTTGAAATGTAACA--TGACTTTATGGGTTTTGGTGGAGGAAAACTAAGACATTGCCATTAATTCT-AGTAAAAGGATGTATATTTATTGTAGGTGATAAAGGTGATGAAAAAGTTTCATGAAGGTAGGGAAGGATTTC-AGCTTAGTAAAGTGCCAATGGATTGTGAAAGATTACCCAATAAAACCACTATTTGCTGAAACAGGCTTGGCTCAATCGAT---TTTCAATTACTAAGCTAAAAT--GTCTTCCCTTGACTTTTATATGGTCTGATTCAGTTAAGACAATAAATTCTATGGAAAAACATTACAGACAGTGGATTTATAAGGATATCTAATTTTGGAGCTTAATTACCAATAATTAATCATCTCTT s bosTau2.scaffold1395 234573 686 - 248814 GAAATGATTG---CTTTGGAAACCCTTAATGACAAATCCTTC-ATCTGCTTAAGCTTCATTAATAATTAGAAATATAAGTAGCAACTTAATGCTAAATCTAATTAATAAGTGGTTAAATTAAATGAATATGATGTGTTTGGGCCAAAA----AAAAAGAAGGTATAAATCCTGAGA--AAGCAGAC-TGTATGTAGGCATCTATCTTTCTGTCTTCT--------------------------------------------GTTTTACT--TTTCTGTTTTCTATTCCATACTGTCTTTGAATATAGTTTTGCAAAGGTATGT----------TTAACAAGTTTGACATGATTGTATAGAATATAATTCTCCAAAGTGGTTGCCTTCAAGAGTTACAATCATTTTTATGTGCTTTGGCAGAGGAAAAAATAGACATTCCCATTAATTTTCAGTCAAA--ATGTATATTTATTATAGGTGATGGCAGCAA-GAGAATGTTTCCTAAAAGTAAATTGGGATTTTTCTCTTAGCAAAGTGCCAACGAATTGTGAAATATTACCCA-TAAAACCACTATTTGCTGAAATAGGCTTGGTTCAATCGATGATTTTCAATTACTAAGTTAAAAACAATCCTCCCTTGATTTTTGTATAGTCTGATTCACTTAAGGCAATAAATACCACAGAAAAGGATTATAAGCTGTGGATTTACAAATATACCTGGTTTTGAAGattaattaataaatattatttacatttt a score=11911 s mm7.chr15_random 4842764 701 + 7075849 TAGTATCTCAAATATCTTGTATGT---TTTTCACATAAAAACACACAACAGATTTTTATT-CAAATGTTGTCTTTG---------TTGTACTGGTATATGCATTGATAAATGTTATGTTCATATGATTTGTCTCAAATGTATTATAAAATATACATAGAATTTAACTTTTAGCT-CTTTACACGTAAAA-GTTTGACTATCAAATTTCATGGTCACTGCTA-----------------------------------------------------------------ATCACTAAGCTCAAGA----------ATGTGTAATCAGTACAGataaattttaaa---atattacaatctata--------aat-taaaatatttatataaaGATGGGAAGCCACCATAGTCAATATAAAGTAAAAAAT----------GTGTTCAA-GTATGCTTTTTCCTAGCCTCTACATTTTATCACACAGTGTATATAGATACATATAAATTAATAACTATATCATTT-TATAGTAAAAGTATGAGAAGAGAGTAGCTGAAAT---------GTATTTTCCTAGCTATATCAGTAATC--------------TACAGATAGATCTCATTG--------ATTTACCTAATAAGCAACTTAAAATTTATA-GTACTATAACTCTTCTCCTCCAGCTAGAAATGACAAAATAAATACCGTCTTCTCTCAAGCAAAACTGAGAGAAAAGTGTTAAGTCTAAGCCATCTGTGAAT-TTTCTCTAATGAGATGTTGTTCCTCTGGGGAAAATGCAAG-AGGAGCTTTAGATCTGTCCAGACTGCAAGTAGAGATTTGATTCTCT s bosTau2.scaffold1395 235259 829 - 248814 taataGTTCAAATGCCATAAACAAACATTTCCATTTAAAGATGTATGATA--TTTTTATTACAAATGATTTTGTAGGGAAAATATTTTAATTTATTTCTGTGTTCATAAATGTTTTGTTCACACGATGTATCTTGAGGGTATGAAGaaatttatttttgatttaaattttaattattttacttttaaaaCATTTGACTATTAATTTTCACATACACTGTTACTTCTAAAGAAGTATAAAAGTTATTTATATTGATAACATCTTTAGATGTTATCAATATAAATGTTGTCAATTAGATAAAGATGTTATCTTAAGATGTTATCAATGTAAATTAAATTCAAACTAATATTTTCATTTATATTGTAAATAATACAAACTCTGTATACAAAATTGTGGAATCAGCATAGTCATTATT--TTTAAAAATCCACTACTCTGTACTCTATGTACTCCTTTATTTTTTGTCTGGATTTTTTCATACTATGT-TCTAGTTATTCACATATTAGTA----TATTATTCAGATAGTAAAAACA-ACGAAAACGACAACTGAAATCATGACAATGTTCATTTTTAGCCAAATCTCTGCTCCTATTGACATTTTGTAAGCATGTATTTTCTTTTGTATCTTATTTCCATAACTATGAATTTACCTTTTCTAAGCAATATGACTC---------AGCCAGAAATGACACAATAAATGCCATTGCCTCTCAAGCAAAACTGAGAGAAAAGACTGAAATCAAAGCCATCTGTGCCTCTTTCCTTAATAGAGTTTTGCTCCTCTGGGGAAAACGAAGGTAGAGGCTTTGGGAATCTACAAATTGCAGGTAGAT-TTTTATCCTCT a score=5344 s mm7.chr15_random 4847171 626 + 7075849 ATATACTCCAATAACTAAACACTTCAGTGCAGATGAAAGCAAAATGC-CAAAGCCTGT----------------CTGAATTATTCTGGAGCAAATAT-CCTGGAAGCCCAGAGC-AGGACAG-----GTAAGTTGAAAGAGG--------TCAGAATATGTACATGATTT--------AGGGTAGTCCTTGATGT----ACACAGCGTCATGGCTAGGA----------------TAAAATTT-----------------------------TGATGAACCTATTTAAAGGAAATTGTGATTAAGCCTATATTGAAATGAAGGTTCTCTC--------------------------------------GGGTAGATGAAATAAATTAATAAGAA-------AGAGAACATGTTATGTTTCTCCTTTG-----------------------ATTGCTCTGGCTCCTTTAGAACCTCTGGGTCTCTGAAATGGTAATACTAGTTTACATCAAACTGGCTTTCAACTTCACATGTGGGAAAAAAAAATCAACAAATTTCATATGG--AGCATGCATGCACAAACCCCAGCCATTCAATGGGCTTG----AACTGTTTTAATTTGTTTACAATAGTTGCTAACAATGCATTCATTAAAATTAGAATACTCAGATTTACAGTGGG---------TTCATGCCTTA-----GTGGACACAAGTGGCTGATTTCTTTCATTT----CTTTCTGAGCTG-AAAATACGAGTATAACATTAGCAAACTTTTGTTATTCCTGACAAGATAGCATGAGA s bosTau2.scaffold1395 236440 802 - 248814 ACATACCCAAATGAGTAAGGGCTATAAG--AGATGAAAGCAATATGTTCAAAACCTGTTTCTTGTGCTGTGTATCTAAATAATTCTGAGTCACTTATGTCTGGAAGCCCAGGGCTAGGAGAGCCACAATAAACAGAGAGCAGACGACTCATTAGAGACTGCTCTTCCTTTTCCCATGCAGTGGAGTTCAAGGTTCTCTGACACTGGATCATAGCTAAGAAGTTATTATTATTATTCATGATTTAATTATTATTAGATCCTTATTGTTATATATGATCTACTTATTCCATGGAAGTTGTAATAAGCTAGACACTGAAATGCTTATTTTCTTTATGTAGATCCTCCAAAGAATCACataaatttaaaaaaaaatagaaaaaaaaaatatatGAAAATAGGAACAGTGAACAGAATGCCTGTTTCCTTTGCCAGGGTTTGGTATGGCCAGAACAGCATCTTGGCTTTTCTAAATCTGCTGAACCTCTGAAATAATATTGGCAGGTTACATCACACCAGCTTTCAACTTCTGATCTTGGCAAGGAATTGCAATAGCTTCTAGATGAATAGTGTGTAGCCCCAAGGAGAAGTCATCC-ACACACTTGAGACAACTG--CAGGCTGGCTtagcttactggctaagcgcctgttctctaaaatgagaatgtacaggtttgttaccggctttttcacttaattctttatgaatgtggaca-aattacttaacctctttgtccttcagtttcctaacctgtaaaataagataatagcagtacctttttcatagtactactgagaggataagatgaga a score=33907 s mm7.chr15_random 4855965 646 + 7075849 AGCTTTAAAGTTCTATGACTATATTTGCATCAGTATTTATTTTCTCACACATTTAGTAAACTAACTCTCTGCATATCACCTTTATACAGGCAATGGAAAGGGAACATATTCTACTAATTAAGTGCCACACTGGATATCTCTTCTCAAGTT-TCCTTCCTGTATATTTGAAACACACCTTTCAAACTGTGGGAAAA-GTGACAACAAACCCCAGTGCAACTCTCTGTCTTTGAGAGAACCAGTTATCCTGGTGTCTCAGGCAGCAAAATCAATTCATGTGCTCTGTCACTCTTAGAAAG--------AACATGCTGTCAGCAGTAAATTCTACAGGATATCCCCAAAGTCAATTGCTTCTTCTATTTGGGATTAAGATGAAAGCAAATTGATCCTTTTCATACATAGAGGGAGCATAAGAGAAGATACAATTTCAGTCTCCTC--------ATTTTTTCCCCTGACTGACAGATTTCTCTTGCCTGGCTAATGTGAAAGTCCTCAGTAATTGAAATTCTTGCTATGACATATACTTAGACATAACCAACAGGAATGCAATTTCCATTTTAGCTACCGTGCATGCTAGAAAGAAGAAAATGTATTTATGAGCAACTCAT-TCTGAGCACATT---GTAAAGACTAAGGTAACCCTTTGCAATGTTTTAAC s bosTau2.chr20 32040157 665 + 42952723 AGTATTTAAATCTTGCAATTATATTTAAGTCAACATTTCCTTTCTTATATATTTAATCAAATAATTCTTTGTAAAGCATCTGTATGTGAGCAATGGCAGTTGGATATATCATATTAATTAAGTACCACAATAGATATTTCCTTTCAGACTATCCTCCCTCTA-ATTTGATATAAACCTTTTAAACTGCAGGAAAAAGTGACAACAACCCCCAGAGCTCTGCTAGGTGATTGAGAGAATCAGTTATCCCAGTGTCACTGGAAGCAAAATCAATTCATGTGTTCTGTCATCCTTAGAAAGTACTCTCTAACATGCTGTCAGCAATAAATTTTACAGGATTTCCCCAAAGTCAATTGCTCCTTCTATTTGGGATTACGATGAAAGCAAATTGATTCTTCCCATACATAGAAGAAGCACAAGAGAAGACATACTTTTAGTCTACTCACTTATTTATTTATTTATTTTACTGACAGATTTCTCTTGGCTCACTAATGT-AAGGTCCTTAGTAATTGAAATTCTGACTGTGAAATATATTCAGGCATAACCAACAGGAATGCAATTTCCCTTAAAGCTACC-TTCATGCAAGTAGGCAGGAAATTTATTTTTGAGTAACTTATCTCTGAGTATGTTAAAAAAAAAAAAAAGGCAACTCTTTCTAACATTTTAAC a score=7554 s mm7.chr15_random 5376838 318 + 7075849 AAGATTATATTCTGCCTAGATAACTT--CTAAGCCAAAGTTCTGTTTAGGT---------AGAACGGTTGAATCTTACTAGAGAGCCTCAAGTCCATGAATTACAATCATCACATCATTCTCT------CCTCTAGGTAGGAAAC--TTTCATTTTCACAATAGAAATAGATTTCATTATGATCTAATGTTCTCCCAATAAAGAGGCCTGGGGA-AGTTTTGGGGTTTCCAGGGTAAACTAATACTATTGCAAGGTATGTTCCTTTTTAATTGAACACTTTCTTGTCATTTTTTTTTCCTG---AATGATATTTTTCAG-CTTCAGAACTACAAAGGCATAG s bosTau2.chr5 15981318 317 - 76426644 AAAATTATCAGCTGCCTGAATTACTTGTTTAGGATGAAGTTCTATTTAGCTGGAGGCAAAAGACTGGTTTAATATT-TTCCAGAATTCCAAGTATTTG---------TATAACATCATTTTCTGTCATATCCTTATGTATGAAATCATTTCAATTTCATGATAAAA-----TTTCATTATGACACACACTTCTCCCAAGAAAAACTCTTGGGGACAATTTTGGGGGTTTCCAGGTAAACTGTTACTAGTACAAGGTA------TTTTTAATGAACTATCTCC----CCCATTTTTTCCCTGTAAAGTTATTTATTCTAGTCTTTTGAACTGCAAAGATACAG a score=16191 s mm7.chr15_random 5378718 674 + 7075849 TGGAGGGGAGAGGTCTTTCAAACTAATGAATGGTTATTCCTAGAATAGTTAATTTCTAAGTGAAACTAACAGTGCTTCCTGTAAAGGCTGAGTATTATACAGCAACCTGTGAGACAAGAATACACTGAAAAGTACCTTTCTGGTCAGTACTTTAGATATTGATGTACAGAATACACTTAAGATCTATTTTTTCATTGCTGTGGCTTTGGGGAAGTCCACAGGCTACAAA-ATAGAGC-------TTTAACTGTGCAGTAAGAGTTT---ATATTGAAAAGTGGTAGCAGGGCATCCAACTTTTACTAAATTGCTTAAAGAGAATTCAAA-----------GGCAACAACGAGAACATTATAATAACCCAACAGTGTTCTTTGTGAACAGTAATTATAACTAGTAGTTAAAAATCTCAGTGAAAAGAACTTGAGATCTTTTACAGATTAGCTACTCTAAGCAAGACCCCTCCAGTAGCTTCATTAATTGAAGGTAATTCCTAGTATCAGCTACCAAGTACTTACAAATGATAATATCATCATGTTACCTAC--AGTT----AATG--TGATCC--AGAGAAAACTGAAATC-----GGGGTCATCTTTAGCAGTGATGTTATATAGGCTTTTACTCAAGGTCACAGTATTTTTTTATATTATTACTTACTCACTTTGGCAAAAGAATAAGCTAGTTG------TATCACAGTTGATGG s bosTau2.chr5 15981888 636 - 76426644 TAAAAGTAGGGGGTCTTCCAAATAAATACTCAGCTATTCCTCGAGTTGTTAATTTCTAAATGAAACTAGAAATACTT-----------------------------------------------------------------GTGGCTACTTTAGAAACTGATGTATAGAATACACTTGAAGTCTATTTTTG-ATAACTGTGATACTGGGGAATTCCATAGAGTAAAAATATAGGGTGTTTTCACTTTACTGTAAAATATGAGCTTTTGGTATTGTAGAG--GAAGATATGCATCCAACTGT-ACTAAGCTCCTTATAGAGAATTTAAAAAATCAATCATGCCAACAAACAAAA-ACTACAATGGCTCAGTAATATTCTTCATGAACAGTAACTGTAAATAGGGCTGAAGTATTGAAAGAAAAGGAACTCAGAATTTTTCATGCATTAACTATTCTAGGCAAGG-CAATGAGGTAGCAATGTGAGTTTGAGATGGTTCAAAATCT-AGTCACCAAGT-----CAAATTATAATGTCATCATTTTAGTTACCTAATTTAGGAATGTTTGATTCTAAGAGAAAGCTGGAAACTAACTGGAATTGTCTCTAGCCATGTGATTATACAGGCTTTCACTT-AGCTTATAG---ATTTTTCTGCTATTATTTATTCATCTGGACATCAGAATAGGCTAACTGTAATTATATCACAGTTCATGG a score=9531 s mm7.chr15_random 5534793 444 + 7075849 TCCTTACATGTAAAGCCATAAAGTCAGAAGGAAAATAAAGTATATATagagagagagagagagagagagagagagag---agagagagagagagagagagagagaACTTTAAGCGTTGTCTTAGAAAGCTTTCCATTACAAAAGTGAAGCCAACA-TACAAGCC-------ACTGCTGGAACTTCATTTACTCATCAGTAAGCCACAA-CTAATCTAAAAAGTTGACTGCCCTTGTTTTATTCTTTATAATCAGCCAAACTGGGTATTTGAAGAATAAGATAAAACCAAATAACTCTTCCCTTGTCCAATTACAAAATTAAAGTAGTAAATTTATTCACTCTTCTGAGAAAGAGAAATTGAATTAAAATATAGTGAGTCAGAGAACTGCCAGAAGCCCCCGTCTTATGATCTCTTGCTTACAAATTCATTCTAA---------TCAGA----GAAGCTTCTCTCTATAA s bosTau2.chrX 30342921 429 + 48857030 TCCCTTTATGAAACACACTGAAATCAATAG-----CAAATAATAT-----GAGAGAGAGAAATACATGGCCAGGCAGTTCAGTGACAAAAACAAAACAAAACAAA----TAGATGTTGACTTGGAAAAATGTCAATTATAGAAACAAAGCAGGCAGTACAAGTCTGCTAGTATTGACACAACTTTATTTGTT----AGTAACTCACAAGCTAATCTGCAAA------CACCATACCTTT----TCTGGAACTGGACAAATAGGGCATTTGAAGTAGAAAACAGAGGCAAATAACTCT----------GATTACACAATTAAAGTAGAAAATTCATTTACTCTTCTCAGAAAGAAGGGCTGTTTCATAATGTAGTGAGTCAGAGAAGTTCCAGAAACCTCTGTTT--TTAGTGTTTACTTGCCAGTTATCTCTTAAAtggtggctcagatggtaaagcgtctgtctacaa a score=15217 s mm7.chr15_random 7075271 286 + 7075849 AGTAGACTTAGTTCCAGAACTTGAACATCTTGTGCATTTTTTTTTGTATATTGAGAGATTTGAAT---------------GATGACTTTGAAGAGGAGACCGTGGAAGGAGGCCTAGAACTCGTCATAAAAATTATATGC-TCTGTCAACAATGTGGGGCTCTGAGTTTGAGAACGGCTTGGTACCTGGTTAAGAACAATCACAAATCATTACTGCTCATCATTCTGAGCAAACAGAACTTCTGATAATAGTGTTTTCAAGGAGATGAATCGCTTAATTTATACTTTTCCAGTCACAAACTG s bosTau2.chr20 8771232 298 - 42952723 AGTAAACTTGGTTCAAGAATTTATGCAACTTAGGCACTTTT----GTCTATTGAGAGATTTGAGTTGATGTTTAAATGGAAATGGCTTTGAAGAAGCATTTGTGGAAGCTGGTCCAACGTTCTTCATAAAAATTATATGCCTCTGTCAACAGTGTGGGCACCCAAGTTTGAGAATGGCTTAGTACCTGGTTAAGAATGATCACAGAGCATTAGAGCTCATTATTCAGAGCAAACAAAACTTCAGATAATAGTATTTTCTAGAAGATGAGTTACCTAATCTGTACTCTTATAGTCACAGATTG