##maf version=1 a score=11854 s mm7.chr19_random 46 233 + 2598976 CCATCAATATTGACCTTGGGAGCAGAAATGTCCACTTCTGGGCCCTTCAAATCCACCCTGGGAACTTTAATGTCACCCTCCAGTTTGGGTCCAGAGATATCAACATCTCCCTTGACCTTTGAGCCCTTTAAATTCAAGTCAATTTCTGGCATAGAGATCTTGGGCATGCTTACATGCATGTCAGGCATTTTCAGTTTGGGACCCTTTAATTTTCCTTCAGGACCATGAACATC s bosTau2.chr29 31987764 233 + 45822729 ccatgaacatccacatctgggacatcaatgtccactttcgggcctttgatgtcaacgtcagggcccttgaggtcaccttccactttgggcagagatacgtccacatcaccctttaccttggggcccttcagattcaggtcaacttcaggcatggagatcttgggtgccttgaggtgcaggtcaggcattttaaacttgggacccttcagttttccttctggaccATGAATGTC a score=113856 s mm7.chr19_random 279 1580 + 2598976 AATATCTGGAGCATTTACATCTAATTTTGGGCTCTTTATGTCAAGAGAAGGGCCTTTCAAATCACCCTCTATATTTGGAATGGAAACATCCACATCTCCTTTCACATTGGGGCCTTTAAGATTAAGATTCAAATCTGGCATGGAGATCTTAGGAGCCTTTATGTTCACCTCTGGCATCTTAAACTTGGGACCCTTCAGTTTTGCATCTGGCCCTTCAATATTCACATCAGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCCTTGGGCAGGTTCACATCTACTTCAGGGCCTTCTCCCTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCACCTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGAACATCCACATCTGGAACATCAATGTCCACTTTGGGGCCTTTGATGTCAACTTCAGGAACTTTAATCTCACCTTCCACTTTGGGCAGAGACATATCCACATCACCCTTCACTTTGGGGCCTTTCAGGTTTAAGTCAATGTCAGGCATGGAGATCTTGGGGGCCTTGATGTTCATCTCAGGCATCTTGAACTTGGGGCCTTTCAGGGTTGCATCTGGCCCTTCAATGTTCACATCTGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCCTTGGGCAGGTTCACATCTACTTCTGGACCCTCTGCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCATTTTGGGCATCTTCAGGTGCCAGTCTGGGCCCTGCACGTCCATATCTGGAGCATTGATGTCCATTTTGGGACCTTTGATGTCAACATCTGGGCCTTTGAGGTCACCTTCCACTTTGGGCAGGGAAACATCTACATCACCCTTCACTTTGGGACCCTTAAGATGTAAATCT------GGCATGGAGATCTTTGGAGCCTTGATGTTCATCTCAGGCATCTTGAACTTGGGGCCCTTCAGCTTTGCATCTGGACCTTCAATATTCACATCTGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCATTGGGCAGGCTCACATCTACTTCAGGGCCTTCTCCCTTGAAGCCAGGCATGCTGAACTTGGGCATTTTTATTTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGGACATCCACATCTGGAACATCAATGTCCACTTTGGGGCCTATTGATGTCAACTTCAGGAACTTTAATCTCACCTTCCACTTTGGGCAGAGACACATCCACATCACCCTTCACTTTGGGGCCTTTCAGGTTTAAGTCAATGTCAGGCATGGAGATCTTGGGGGCCTTGATGTTCATCTCAGGCATCTTGAACTTGGGGCCTTTCAGTTTTGCATCTGGCCCTTCAATATTCACATCTGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCCTTAGGCAGGCTCACATCTACTTCAGGGCCTTCTCCCTTGAAGCCAGGCATGCTGAACTTGGGCATTTTTATTTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGAACATCCACATCTGGAACATCAATGTCCACTTTGGGGCCTTTGATGTCAACTTCA s bosTau2.chr29 31988399 1585 + 45822729 AATATCAggagcatcaatatccagtttggggcctttgatgtccacctcaggagccttgagatcaccctcaactttgggcagagatatatcaacatcacccttcattttgggacccttcaggttgaagtcaaggtcaggcatggagatcttgggagctttgatgttcatctctggcattttgaacttggggcccttcagtttggcatctggaccttcaatgttcacatctggaacatcaatgtccaccttgggtccggagacgtctatgtcggctttgggcaggttcacatccacttctgggccctctcctttgaagccaggcatgctgaacttgggcattttcatcttgggcatcttcaggtgccagtctgggccatgaacatccacatctgggacatcaatgtccactttggggcccttgatgtcaacttcagggcccttgaggtcaccttccaccttaggcagagaaatgtccacatctccctttactttgggtcctttcagatttaagtcaatgtcaggcatggagatcttgggagctttgatgttcatctctggcatcttgaacttggggcccttcagttttgcatctggaccttcaatgttcacatctggaacatcaatgtccaccttgggtccggagatgtctatgtcggccttgggcaggttcacgtccacttctgggccctctcctttgaagccaggcatgctgaacttgggcattttcaccttgggcatcttcaggtgccagtctgggccatgaacatccacatctgggacatcaatgtccactttcgggcctttgatgtcaacgtcagggcccttgaggtcaccttccactttgggcagagatacgtccacatcaccctttaccttggggcccttcagattcaggtcaacttcaggcatggagatcttgggtgccttgaggtgcaggtcaggcattttaaacttgggacccttcagttttccttctggaccatgaatatcaatgtcgggagtgtctatgtccaccttgggacctgatatgtcaatgtcagctttaggcaggttcacatccacttctgggccctctcctttgaagccaggcatgctaatcttgggcatttttatcttgggcatcttcaggtgccagtctggaccatgaacattcacatctggagcatcaatgtccactttggggcct-ttgatgtcaacttcaggggcctttaggtcaccttccaccttaggcagagaaacatccacatctcctttcaccttggggcctttcaggtgtaaatcaaagtcaggcatggagatcttgggggctttgatgttcatctctggcatcttgaacttgggacctttcaactttccttctggtccttcaaggctcacatcagggccttcgatgtccactttgggtgctgacacatcaatgtcagccttgggcaggttcacatccacttccgggccctctcctttgaagccaggcatgctgaacttgggcattttcatcttgggcatcttcaggtgccagtcagggccttgaacgtccacatctggagcatcaatgtccactttgggacctttgatgtcaacttca a score=3762 s mm7.chr19_random 1859 55 + 2598976 GGGAACTTTAATCTCACCTTCCACTTTGGGCAGAGACACATCCACATCACCCTTC s bosTau2.chr29 31990205 55 + 45822729 gggacccttgaggtcaccttctacttttggcaaagatacatccacatcacccttc a score=84777 s mm7.chr19_random 1914 1133 + 2598976 ACTTTGGGGCCTTTCAGGTTTAAGTCAATATCAGGCATGGAGATCTTTGGAGCCTTGATGTTCATCTCAGGCATCTTGAACTTGGGGCCCTTCAGTTTTGCATCTGGCCCTTCAATGTTCACATCTGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAATGTTAGCCTTAGGCAGGCTCACATCCACTTCTGGGCCCTCTCCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCACCTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGAACATCCACATCTGGAACATCAATGTCCACTTTGGGGCCTTTGATGTCAACTTCAGGAACTTTAATCTCACCTTCCACTTTGGGTAGAGACACATCCACATCACCCTTCACTTTGGGACCTTTCAGGTTTAAGTCAATATCAGGCATGGAGATCTTAGGGGCTTTGATGTTCATCTCAGGCATCTTAAATTTGGGGCCTTTTAAGCTTCCCTCTGGACATTCTACATTGAGTTCTGGGCCCTCAATATTCATACTGGGACCTTCTATATTAATGTCTCCTTTTGGTAAATCCACAGCCACATCAGGCCCTTCTGCTTTTATGCCAGACACACCAAACTTGGGCATTTTCATTTTGGGCATTTTTAGATTCCATTCTGGTCCATGAACATCCACATCTGGTGCATTAAGTTGAACATCTGGTGCTTTAATGTCCACTTTGGGTCCTTTGAAGTCTCCTTCTAAATTTGGGCCTGCTGCATCTAGGTCTCCTTTGACTTTAGGACCCTTCAAGTTTAGCTCCACATCGGGCATGGAGACTTTGGGAGATGAAATGCTCAGAAAGGGCATTTTAAACTTGGATCCTTTCACTTTACCTTGGACTTCAACTTCTGGAGCATTAATATCAACTTTTGGAGCTGTTATATCAACATCTGGCTTTTTAAGTTTGACATCCACTTCAGGTGTTTGAACTTTGGACCCAGAAAAATTAAATTTAGGAAGCTTAAAACGAGATTTCTTTGCTTTCCCATCAATATTGACCTTGGGAGCAGAAATGTCCACTTCTGGGCCCTTCAAATCCACCCTGGGAACTTTAATGTCACCCTCCAGTTTGGGTCCAGAGATATCAACATCTCCCTT s bosTau2.chr29 31990482 1133 + 45822729 actttgggtcctttcagatttaagtcaatgtcaggcatggagatcttgggagctttgatgttcatctctggcatcttgaacttggggcccttcagttttgcatctggaccttcaatgttcacatctggaacatcaatgtccaccttgggtccggagacgtctatgtcagccttgggcagattcacatccacttctgggccctctcctttgaagccaggcatgctgaacttgggcattttcaccttgggcatcttcaggtgccagtctgggccatgaacgtccacatctgggacatcaatgtccactttcgggcctttgatgtcaatgtcagggcccttgaggtcaccttcaactttgggcagagagatatccacgtcacctttcaccgtggggcccttcaagtttaaatcaatgtcaggcatggagatcttgggagctttgatatttatgtcaggcatcttgaatttggggccttttaagcctccgtctagaccttccactttgacttctgggccctcaatgtccattttgggaccctctatgttgatatcgcctttcggcagatccacagccatatctggtccttctgcttttaacccaggcacactgaacttgggcattttcatcttgggcatttttaaattccagtctggaccatgaacatccacatcAGGTGCATCCAGATGAATTTCTGGTGCCTTAATATCCACTTTGGGTCCTTTAAGATCACCTTCTAAATTAGGACCTGCAACATCTAAGTCTCCTTTGACTTTAGGACCTTTCAGATTTAACTCCACATCAGGCATTGACACTTTAGGAGATGAAATACTTAGGAAAGGCATTTTGAACTTGGGTCCTTTTACTTTTCCTTGGACCTCAACATCAGGAGCATTAATGTCAACTTTTGGACCTGTTACGTCAAGATCTGGCTTTTTGACCTTGACATCTACCTCAGGTGTCTGAACTTTGGAGCCCGAAAAATTAAATTTAGGAAGCTTAAAACGTGATTTCTTTGACTTTCCTTCAATATTCAGCTTAGGACCAGGAATGTCCACTTCTGGGCCCTTTATATCCAACTTGGGAGCTTTAATATCACCTTCCAATTTGGGCCCAGAAACATCAACATCTCCCTT a score=121633 s mm7.chr19_random 3050 1781 + 2598976 CTTTGAGCCCTTTAAATTCAAGTCAATTTCTGGCATAGAGATCTTGGGCATGCTTACATGCATGTCAGGCATTTTCAGTTTGGGACCCTTTAATTTTCCTTCAGGACCATGAACATCAATATCTGGAGCATTTACATCTAATTTTGGGCTCTTTATGTCAAGAGAAGGGCCTTTCAAATCACCCTCTATATTTGGAATGGAAACATCCACATCTCCTTTCACATTGGGGCCTTTAAGATTAAGATTCAAATCTGGCATGGAGATCTTAGGAGCCTTTATGTTCACCTCTGGCATCTTAAACTTGGGACCCTTCAGTTTTGCATCTGGCCCTTCAATATTCACATCAGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCCTTGGGCAGGGTCACATCCACTTCTGGGCCCTCTGCTTTGAAGCCAGGCATGCTGAACTTAGGCATTTTCATCCTTGGGCATCTTCAGGTGCCAATCTGGGCCATGAACATCCATATCTGGGGCACTGATGTCCACTTTGGGACCTTTGATATCAACTTCAGGGCCTTTGAGGTCTCCTTCCACTTTAGGTAAAGAAACATCTACATCACCCTTCAACTTTGGTCCTTTCAGGTTCAGGTCAATTTCTGGCATTGAAATCTTGGGTGCCTTAAGGTGGAGATCAGGCATTTTAAACTTAGGGCCCTTCAGTTTCCCTTCTGGTCCTTCAATATTAACATTAGGGCCTTCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCCTTGGGCAGATTTACATCCACTTCTGGACCTTCTCCTTTGAAGCCAGGCATGCTGAACTTAGGCATTTTCACCTTAGGCATCTTCAAGTGCCAGTCAGGACCATGTACATCAACATCGGGGGCACTGATGTCCATTTTGGGACCTTTGATGTCAACCTCTGGGCCTTTGAGATCACCTTCCACTTTGGGCAGGGAAACATCTACATCACCCTTCACTTTGGGACCCTTAAGATGTAAA------TCTGGCATGGAGATCTTTGGAGCCTTGATGTTCATCTCAGGCATCTTGAACTTAGGACCCTTCAGCTTTGCATCTGGACCTTCAATATTCACATCAGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCATTGGGCAGGTTCACATCTACTTCAGGGCCTTCTCCCTTGAAGCCAGGCATGCTGAACTTGGGCATTTTTATTTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGGACATCCACATCTGGAACATCAATGTCCACTTTGGGGCCTTTGATGTCAACTTCAGGAACTTTAATCTCACCTTCCACTTTGGGCAGAGACACATCCACATCACCCTTCACTTTGGGGCCTTTCAGGTTTAAGTCAATGTCAGGCATGGAGATCTTGGGGGCCTTGATGTTCATCTCAGGCATCTTGAACTTGGGGCCCTTCAGTTTTGCATCTGGCCCTTCAATGTTCACATCAGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAATGTCAGCCTTGGGCAAGTTCACATCCACTTCTGGGCCCTCTGCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCATTTTGGGCATCTTCAGGTGCCAGTCTGGGCCCTGCACGTCCACATCTGGAGCATTGATATCCACTTTGGGACCTTTGATGTCAACCTCTGGGCCTTTGATGTCACCTTCTACTTTGGGCAGAGAAATATCTACATCACCCTTCACTTTAGGACCCTTAAGATGCAAATCAAAG s bosTau2.chr29 31991618 1786 + 45822729 TTTTGAGCCCTTCAAATTCAGGTCAATTTCTGGCATGGAGATCTTGGGCATGTTTACATGCATGTCAGGCATCTTCAGCTTTGGACCTTTTAATTTGCCTTCTGGGCCATGAATGTCAATATCAGGTGCATCTACATCCATCTTTGGCCCTTTGATGTCAAGAGAAGGCCCTTTCAAATCACCTTCTACATTTGGAAGTgaaacatccacctctcctttcactttagggcctttaagattaaggtccagatctggcatggagatcttaggagctttgatgttcatctctggcgtcttgaacttgggacccttcagtttcgcatctggaccttcaatgttcacatctggaacatcaatgtccaccttgggtccggagacgtctatatcagccttgggcaggttcacatccacttctgggacctctcctttgaagccaggcatgctgatcttgggcatttttat-cttgggcatctttaggtgccagtctgggccatgaacatccacatctgggacatcaatgtccaccttgggggctttaatatccacttcaggaactttcatctcaccttccacttttggtaaagacacatcaacatctcccttcactttggggcccttcaggttaagatcaatgtcaggcatggagatcttgggggctttgatgttcatctctggcatcttgaacttaggacccttgagcttcccttcaggaccttcaaggctcacatcagggccttcaatgtccactttgggtcctgagatgtcaatgtcagctttaggcaggttcacatccacttctgggccctctcctttgaagccaggcatgctgaacttgggcattttcatcttgggcatcttcaggtgccagtctgggccatgaacgtccacatctgggacagcaacatccactttggggccttttatgtcaacttcaggggcctctaggtcaccttccaccttaggcagagaaacatccacatctcctttcaccttggggcctttcaggtgtaaatcaaagtcaggcatggagatcttgggggctttgatgttcatctctggcatcttgaacttgggacctttcaactttccttctggtccttcaaggttaacatcagggccttcaatgtccaccttgggtgctgacacatcaatgtcagccttgggcaggttcacatccacttccgggccctctcctttgaagccaggcatgctgaacttgggcattttcatcttgggcatcttcaggtgccagtcagggccttgaacgtccacatctgggacatcaatgtctactttgggacctttgaggtcaatttcaggtcctttaaaatctccctctaccttggggcacgtgacatccacatcaccttttatctttggacctgtcagattaagatcaatatctggcatggatatcttcggagttttaaaatgcatttccggcattttaaactttgggcttttccactttccttctggtccttcaagatgaacatcagggccttcaatgtccactttgggacccgagacatcaatgtcggccttgggcaagttcacgtccatgtctgggccctctgctttgaagccaggcatgctgaacttgggcattttcatcttgggcatcttcaggtgccagtctgggccatgaacgtccacatctgggacagcaacatccactttggggccttttatgtcaacttcaggggcctctaggtcaccttccaccttaggcagagaaacatccacatctcctttcaccttggggcctttcaggtgtaaatcaaag a score=14335 s mm7.chr19_random 4831 285 + 2598976 TCAGGCATGAGAGATCTTGGGAGCCTTGATGTTCATCTCAGGCATTTTGAACTTCGGGCCTTTCAATTTGCCCTCTGGTCCTTCAATCTCAATGTC---------------------TGGCCTGCTCATGTCCACATTTGGCCCTTTGAGGTCTCCTTCCAATTTGGGAACATCTACATCCACCTCCCCCTTTATCTTTGGACTCTTTAAGTGAAGATCAATGTCTGGCATGGAGATTTTGGGAGTTTTGAAGTGCATGTCTGGCATCTTGAACTTGGGGCTTTTCCATTTACCTTCTGGGCCTTC s bosTau2.chr29 31990068 305 + 45822729 tcaggcatg-gagatcttgggagcctttaggtgcatctctggcatcttaaatttgggccccttcaatttcccctctgaaccttcaatgttaatatcaggagtttcaacatctacttttgggcccttgatgtccacctcgggacccttgaggtcaccttctacttttggcaaagatacatccacatcacccttcagtttgggacccttcagattaaagtcaaggtcaggcatggagatcttgggagctttgatgttcatctctggcatcttgaatttgggacccttcagttttgcatctggaccttc a score=5780 s mm7.chr19_random 5123 132 + 2598976 ACTTCTGGTATGTTGGCATCCAATTTGGGGCCCTTGAGATCCAGTTCTGGACCCTTTAATTCTCCTTCAATCTTAGGGACTGAAACGTCAATATCTCCTTTGATTTTAGGACCCTTTAAGTTGAAATCAACA s bosTau2.chr29 31990380 132 + 45822729 acatctggaacatcaatgtccactttggggcccttgatgtcaacttcagggcccttgaggtcaccttccaccttaggcagagaaatgtccacatctccctttactttgggtcctttcagatttaagtcaatg a score=34757 s mm7.chr19_random 5255 510 + 2598976 TCAGGCATGGAGATCTTGGGGGCCTTGAAGTGCATGTCAGGCATCTTAAATTTGGGGCCCTTCAGCTTCCCTTCTGGCCCTTCAATATTCACATCTGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAATGTCAGCCTTGGGCAAGTTCACATCCACTTCTGGGCCCTCTGCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCATCTTGGGCATCTTCAGGTGCCAGTCTGGGCCACGCACATCCACATCTGGGGCATTGATGTCCACTTTAGGGCCTTTGATATCCACATCTGGCACTTTCATCTCACCTTCTATCTTGGGCACTGTCACATCCATGTCCCCCTTGACTTTGGGGCCTTTCAGATGCAAGTCCACATCAGGCATGGAGATCTTAGGAGCCTTGAAGTGCATGTCAGGCATCTTGAACTTGGGGCCTTTCAACTTTGCATCAGGACATTCCAGATCAACATCAGGTACTTCCACATCCACACTTGGGCCTTTT s bosTau2.chr29 31993404 510 + 45822729 tcaggcatggagatcttgggggctttgatgttcatctctggcatcttgaacttgggacctttcaactttccttctggtccttcaaggttaacatctgggcctttaatgtccatcttggggccagagatgttaatgtcagccttgggcaagttcacatctacctcagggccctctcctttgaagccaggcatgctgaacttgggcattttcatcttgggcatcttcaggtgccagtctgggccttgaacgtccacatctggagcatcaatgtccactttgggacctttgatgtccacatctggcactttcatttcaccttctatcttgggcagagaaatatccacatcccccttcactttgggtcctttcaggtttaagtcaatgtcaggcatggagatcttgggagcctttaggtgcatctctggcatcttaaatttgggccccttcaatttcccctctgaaccttcaatgttaatatcaggagtttcaacatctacttttgggcccttg a score=6523 s mm7.chr19_random 5765 156 + 2598976 AATTCTCCCTCTAATTTTGGCACTGTCACATCCATGTCCCCCTTGACTTTGGGGCCTTTCAGATGCAAGTCCACATCAGGCATGGAGATCTTAGGAGCCTTGAAGTGC--ATGTCAGGCATCTTGAACTTGGGGCCTTTCAACTTT------------GCATCAGGA-CAT s bosTau2.chr29 31991205 169 + 45822729 AGATCACCTTCTAAATTAGGACCTGCAACATCTAAGTCTCCTTTGACTTTAGGACCTTTCAGATTTAACTCCACATCAGGCATTGACACTTTAGGAGA--TGAAATACTTAGGAAAGGCATTTTGAACTTGGGTCCTTTTACTTTTCCTTGGACCTCAACATCAGGAGCAT a score=797 s mm7.chr19_random 5921 24 + 2598976 TCCAGATCAACATCAGGTACTTCC s bosTau2.chr29 31991511 24 + 45822729 TTCAGCTTAGGACCAGGAATGTCC a score=46370 s mm7.chr19_random 5945 825 + 2598976 ACATCCACACTTGGG-CCTTTTAATTCTCCCTCTAATTTTGGCACTGTCACATCCATGTCCCCCTTGACTTTGGGGCCTTTCAGATGCAAGTCCACATCAGGCATGGAGATCTTAGGAGCCTTGAAGTGCATGTCAGGCATCTTGAACTTGGGGCCTTTCAACTTTGCATCAGGACATTCCAGATCAACATCAGGTACTTTCACATCCACATTGGTCCCTTTGATGTCAACTTGAGGGCCTCTGAGATCAGCTTCCATTTCTGGCACAGAAGCATCTATCTCTCCTTTCAGTTTGGGCCCCTTAAAATTCAAGTCCACATCGGGCATAGAGATCTTGGCGGCCTTGATATTCAACTTAGGCATCTTAAATTTGGAGCCTTTCAGTTTTCCTTCTGGACCCTCAATATCTAAGTCAGGAACATC--AATGTCCACTTTGGGTCCTGAGACATCAATGTCAGCCTTGGGCAGGTTCACATCCACTTCAGGGCCCTCTGCTTTGAAACCAGGCATGCTGAACTTAGGCATTTTCACCTTGGGCATCTTCAGGTGCCAGTCTGGGCCACGCACATCTACATCTGGGGCATTGATGTCCACTTTGGGGCCTTTGATGTCCACATCTGGAACTTTCATTTCACCTTCTATCTTGGGCATTGTCACATCCATATCCCCCTTGACTTTGGGGCCTTTCAGATGTAAATCTACATCAGGCATGGAGATCTTAGGAGTCTTGAAGTGCATGTCAGGCATCTTAAACTTGGGACCCTTCAGCTTCCCTTCTGGACATTC------------------------------------------AATATCAATATCACC------AACATCCACATCAACTTCAGGACCC s bosTau2.chr29 31993914 874 + 45822729 atgtccac-ctcgggacccttgaggtcaccttctacttttggcaaagatacatccacatcacccttcagtttgggacccttcagattaaagtcaaggtcaggcatggagatcttgggagctttgatgttcatctctggcatcttgaatttgggacccttcagttttgcatctggaccttcaatgttcacatctggaacatcaatgtccactttggggcccttgatgtcaacttcagggcccttgaggtcaccttccaccttaggcagagaaatgtccacatctccctttactttgggtcctttcagatttaagtcaatgtcaggcatggagatcttgggagctttgatgttcatctctggcatcttgaacttggggcccttcagttggtcatctggaccttcaatgttcacatctggaacatctaaatg-ccaccttgggtccggagacgtctatgtcagccttgggcagattcacatccacttctgggccctctcctttgaagccaggcatgctgaatttgggcatttttatcttgggcatcttcaggtgccagtctgggccttgaacatctacgtctgggatatcaacatccactttggggcctttgatgtccacatctggccctttcagatccccttcaactttgggcagcgaaacatccacatcccctttcaccgtggggcccttgaggtttaaatcaatgtcaggcatggagatctttggagttttgaagtgcatctcaggcatcttaaacttaggacccttgagctttccttctggcccctcgagactcacatctggggcttcaatgtccaccttgggtccagagatgtcaatatcagctttaggcagattcacatccacctcagggccc a score=67654 s mm7.chr19_random 6770 1111 + 2598976 TTCAATTCTCCCTCTACTTTTGGAAGAGAAACATCTACACCACTTTTCAGTTTAGGTCCTTTCAAATTAAGCCCAACATCAGGCATAGAGATTTTGTGTGTCTGTATATTCATGCTTGGCATCTTGAACTTGGGACCCTTTAGTTTCCCTTCTGGCCCTTCAATATTCACATCTGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAATATTGGCCTTTTGAAGATTCACATCTACTTCTGCACCCTCTCCTTTGAAGCCAGGCATGCTGAACTTAGGCATTTTGACCTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGAACTTCCACATCTGGTGCC------TCTACTTTAGGACCTTTGATGTCAACAGCAGGAGCTTTTATTTCTCCTCCCACTTTTGGAACTGAGACATCACAATCTGCTTTTACCTTAGGGCCTTTCAAATTCAAGCTAACATCTGGCATGGATATCTTCTGAGGCTTTATGTTCATTTCTGGCATCTTAAATTTTGGACCTTTTAGTTTTGTATCTGGACCTTCAATATTTACATCTGGAACATCGATGTCTACCTTGGGTCCTGAAACATCAATGTTGGCCTTGGG------GATGTCTACTTCTGGACCTTCTCCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCACCTTGGGCATCTTAAGGTGCCAGTCTGGGCCATGAACCTCAACATCTGGAGCATCAATGCCAACTTTGGGTCCTTTAATGTCCACATCTGGCACTTTTACTCCACCTTCTACCTCAGGCAATGATGCATCCACATCTGCTTTTCCTTTGGGCCCCTTAATATTCAAGTCCACATCAGGCATGGAGATCTTGGGGGCCTTGAAGTGCATGTCAGGCATCTTAAACTTGGGGCCCTTCAGCTTCCCTTCTGGTCCCTCGATGCTCACATCTGGGGCCTCAATATCAACTTTGGGCCCTGAGACATCAATGTCAGCCTTGGGCAGATTCACATCCACTTCTGGGCCCTCTGCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCATCTTGGGCATCTTCAGGTGCCAGTCTGGGCCCTGCACGTCCATATCTGGAGCATTGATGTCCATTT s bosTau2.chr29 31994923 1123 + 45822729 ttcatttcaccttctatcttgggcacagacacatccacatctcctttgactttagggcccttcaagtttaagtccacatcaggcatggagatcttggggcccttgaagtgcatctcaggcatcttgaacttgggacctttgagctttccttctggaccctcaaggctcacatctggggcttcaatatccaccttgggtccagagatgtcaatatcagctttaggcagactcacatccacctcagggccctctcctttgaagccaggcatgctgaacttgggcattttcatcttgggcatcttcaggtgccagtcagggcccttgacatccacatctgggacatcaacgtccactttggggcctttgatgtccacatctggcactttcatttcaccttctatcttgggcacagacacatccacatctcctttgactttggggcctttcaagtttaagtccacatcaggcatggagatcttggggcccttgaagtgcatctcaggcatcttaaacttaggacccttgagctttccttctggcccctcaaggctcacatctggggcttcaatgtccaccttgggtccagagatgtcaatatcagctttaggcagattcacatccacctcagggccctctcctttgaagccaggcatgctgaacttgggcattttcaccttgggcatcttcaggtgccagtcagggcccttgacatccacatctgggacatcaacgtccactttggggcctttgatgtccacatctggcactttcatttcaccttctatcttgggcacagacacatccacatctcctttgactttggggcctttcaagtttaagtccacatcaggcatggagatcttggggcccttgaagtgcatctcaggcatcttgaacttgggacccttgagctttccttcaggcccctcaaggctcacatctggggcttcaatgtccaccttgggtccagagatgtcaatatcagctttaggcagattcacatccacctcagggccctctcctttgaagccaggcatgctgaacttgggcattttcatcttgggcatcttcaggtgccagtcagggcccttgacatccacatctgggacatcaacgtccactt a score=37909 s mm7.chr19_random 7881 558 + 2598976 TGGGACCTTTGATGTCAATGTCTGGGCCTTTGAGGTCACCTTCCACTTTGGGCAGGGAAACATCTACATCACCCTTCACTTTGGGACCCTTAAGATGTAA------ATCTGGCATGGAGATCTTTGGAGCCTTGATGTTCATCTCAGGCATCTTGAACTTGGGGCCCTTCAGCTTTGCATCTGGACCTTCAATATTCACATCAGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCCTTGGGCAGGCTCACTTTT------GGGCCCTCTGCTTTGAAGCCAGGCATGCTGAACTTAGGCATTTTCATCTTGGGCATCTTCAGGTGCCAGTCTGGGCCTTGTACATCCACATCTGGGGCACTGATGTCCACTTTAGGGCCTTTGATATCCACATCTGGCACTTTCATTTCACCTTCTATCTTGGGCACTGTCACATCCATGTCCCCCTTGACTTTGGGGCCCTTCATGTTTAAGTCCACATCAGGCATGGAGATCTTGGGTGCCTTGAAGTGCATGTCAGGCATCTTAAACTTGGGGCCCTTCAGCTTTCCTTCTGGTC s bosTau2.chr29 31996670 570 + 45822729 tgggacctttGATGTCAACTTGAGGACCTTTGAGATCACCTTCTAGTTCTGGCACAGAAACATCTATCTCTCCTTTCAGTTTTGGTCCCTTCAAATTCAAGTCCACATCTGGCATGGAGATCTTGGGAGCTTTGATATTCAACTTAGGCATCTTAAATTTAGAGCCTTTCAATTTTCCTTCTGGCCCCTCAAGACTCACATCTGGGGCTTCAACGTCCACCTTGGGTCCAGAGATGTCAATATCAGCTTTAGGCAGATTCACATCCACCTCAGGGCCCTCTCCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCACCTTGGGCATCTTCAGGTGCCAGTCAGGGCCTTTGATATCGACATCTGGGACATCAACGTCCACTTTGGGGCCTTTGATGTCCACATCTGGCACTTTCATTTCACCTTCTATCTTGGGCACAGACACATCCACATCCCCTTTGACTTTGGGGCCTTTCAAGTTTAAGTCCACATCAGGCATGGAGATCTTGGGAGCCTTGAAGTGCATCTCGGGCATCTTAAACTTGGGCCCCTTAAGCTTTCCTTCTGGAC a score=16688 s mm7.chr19_random 8439 283 + 2598976 CCTCAAGGCTCACATCTGAGGTTTCAATGTCAAGTTTAGGTCCTGAGACATCAATAGTAGCCTTAGGCAAGCTCACATCCACATCTGGACCCTCACCTTTGAGAGTAGGCATACTGAACTTGGGCATTTTCATCTTTGGCATCTTCAGGCTCCATTCTGGGCCTTGCACATCCACTTCTGGTGCTTTAATATCTACATTTGGACCTTTAATGTCCACATCTGGAGCTTTCATCTCTCCCTCTATTTTTGGTGCAGACATGTCTAGATTTCCTTTCATTTTGGG s bosTau2.chr29 31997462 283 + 45822729 CTTCAATATTTACATCTGGGGCATCAATGTCCACCTTGGGTCCTGAGATGTCAATGTCAGCCTTGGGCAAGTTCACATCCACTTCTGGGCCCTCTCCTTTGAAGCCAGGCATGCTAAACTTGGGCATTTTCACCTTGGGCATCTTCAGGTGCCAGTCTGGACCATGAACTCCTGCATCTGGTGCATTAATGTCCACTTTTGGACCTTTGATGTCAACATCAGGGGCTTTAATCTCTCCTTCTACTTTTGGAACTGTAACGTCATAATCTCCTTTCATTTTAGG a score=249310 s mm7.chr19_random 8722 4549 + 2598976 TCCTTTGAGATCCAGATCCACATCTGGTAGAGACACCTTTGGAGCCTTGAAGTGCATCTCAGGCATCTTAAATTTGGGGCCTTTCAACTTCCCTTCTGGTCCCTCAAGGTTCAGATCTGGAGCACTAATATCTAGCTTTGGTACAGAAATGTCCACATCAGCCTTGGGCATGTTCACATCCAACTCTGGGCCTTCACCTTTGAGACTAGGCATGCTGAATTTGGGCATTTTAATCTTTGGCATTTTCAAGTTCCAGTCGGGACCATGAACATCAACATCTGGAACACTGACATCTACTTTGGGGCCTTTCAAGTCTCCTTCCAGCTTTGGCATTGTGACATCATATTCTCCTTTAACTTTGGGGCCTTTCATATGCAAATCCACATCAGGCATGGATATCTTTGGGGCCTTGATGTTCATCTCAGGCATCTTCAGCTTAGGACCCTTCAGCTTTCCTTCAGGTCCTTCAATGTTCACATCTGGAACTTTGACATCCACATTGGGTCCTGAGACATCAATGTCAGACTTTGGGAGATTCACCTCCATTTCTGGGCTCTCTGCCTTGAAGCCTGGCATGCCAAACTTGGGCATTTTTATCTTGGGCATCTTCATATGCAATTCAGGACCTTGAACATCCACATTTGGAACATCAATGTCCAGTTTAGCACTTTTAAGTTCAACATCAGGAACTTTAATCTCACCTTCTGCCCTTGGCACTGTGACATCATATTCTCCCTTTACATTGGGGCCTTTTAAGTGTAAGTCCACATCTGGCATGGAGATCTTTGGAGCTCTGATATTCATTTCAGGCATTTTAAACTTATGCCCTTTCAACTTCCCTTCTGATCCTTCAATGCTTACATCTGGAGCACTGACTTCCACCTTAGTCCCAGAAATGTCAAGGTCAGCCTTGGGCAGGTTCACATCCACTTCTGGGCCCTCTGCTTTGAACCCTGGCACACTGAATTTGGGCATTTTCATCTTGGGAATCTTCAG------GTCTGGGCCATGAACATCCACTTGTGGGGTGTCAATGTCCACTTTGGAGCCTTTCAGTTCCCCCTCAAGCTTTGGTGGTGTTACTTCATACTCTCCCTTCACCTTTGGCCCTTTGATATGCAGATCCACATCAGGCATAGAAATCTTTGGAGTCTTGACACTTACTTCAGGAAGATTAATGTCAGGGCCTTTAAGTTTGCCACCCAGACCCTCCATGTTGACGTTTGGAGCTTCTACATTGACCTTAGGCCCCGAAATACTAATATCTCCTTCGGGCAGAGTAACATTTACATCTAGGCCTTCTCCTTTGACTCCTGGGACACTGAA---------------CTTGGGCATCTTCAAATTCCATTCTGGACCATGGACTTCTACATCTGGAGCACTGATGTCCATTTTGGGGCCTTTGACATCAACTTCAAGACCTTTGGCTTTTCCTTCTACATTGGGGAGAATGACATCTACACCCCCTTTCCCTTTAGGTGCAGCTACATTTAAGTCTACATCTGCCATAGAAATCCTACAGGCCCCTATTTTTCCAGAAGGGCTGCTGATCTTGGGACCTGTCAAGGTCCCCTCTAAGTTTGGTGTCTCTATGTCCACTCTGGAGCCTTTAACTGCCATCTGAGGGCCTTTAACATCACCTTTCACCTCAGGAGCAGATGTCTTCATATTTCCTTTCAGTTTACAGGACCCCAGGCTCAGATCCACATCCTGCATGGAGATTTTAGGTTTCTGGATGATCATTTCAGGAGTCTTGACTTTAGCACCCTTCATCTTCCCTTCGAGCCCACCAGTAGCAATCTCAGGCAGACTTACATCCCCAGAGACCCCAGGAAGGGTCACTTCACCTGTGGGCAGTGCCACATCAAGGCCAATCCCCTCTCCCTTTGAACCTGATGCAGAGAACTTAGGGACTTTCATCTTGGGCATATTCAGTTTGCCCCCTAGCCCATGAACATCAACATCAGGGGTTCCGATTTCCACACTAGGACCAGTGATGCTGCCCTCGATTTTGGAAGCACAGGCATCCATTCCTATGTTCCCTTGCAGCTTGGTACCTTTCAGGCCTAAGTCACCTTCAAGTGATGGCCCAGTGATCTGGGGACCCTTCAGTTTCCCCTCAAGCCCCTCAATATTGACAGAGGAGGGATTTACTTCCAGGTGAGGAGCCTGGATGTTTCCCCCAATAGCCAAGCCTGGCTTGTCACCCTTGTGTCCCACAGAGGATTCAGGTGCAGAAACACTCAGCCCTACCTCTGGAATCTGGCCATCCAGACCTGCGGAGACACCAAATTTTGGCACCTTCATGGTAGGAATTTTAATTTTCCCAATATCACCACTCTGGAGGGATGGGGCCTGTACCTCTACTGAGCCAGCCCCAAGAGAAGACGAAACGTCTACTCCTGGAACTCGGATCCCTCCTTTGCCACCCAAGTCCAAGCCTTTTGCTTTGACATTGACATCTAGGCTTCCCACCTTTGCCCCAGGCACAGTGACCTGGAATTTTGAGTGGCCAGCACCTTCAAGCTCTGGTCCTGAAGCAGAAATGGCACCTGCCCGGATATCCACAGCAGAGCCTGTGGTTGGAGAGGCTGGCCCGGATCCCGATGGCAGTCGGATCACCGTTTTCCCTGGCTGGGTTTCCACATCTGTGTTGGAGATTTCAGTCACTTCATGCCTTGGTATCTTGATCATGAACTCAGGGCTGGTGATGTCAATGTCCTTCACTCCTTCCCGACCGGTCACATCCACAGTGTAGGCTGTAACCCTTCTAGTCACTGTGATGGTGCGGCTCTGGGTCTCCCCAAGGTCCCCTTCTACTCCATCCTCCGACCTCAGGCGTGGCTTGATCTTCGTGGTGTAGATGCGCTGGTAGTCCTCATCATCCCCGCTCTGCAGAAAGACATGCCCGGCAGAGGTTGCAGCAAAGCCTGCCTGAATCAGCAAATGCCCGGCTGCAGTCCAGCCAACAACAGGGTTGCCTGGTTCCCAAAGGTGCTCAGACCATAACAGAGGTCTAGAGAGCCTCCTGGGGCAGAACACAGGGCACTGAAGAAAGGGGTTGACAGTCAAATCATAAGAGGAAAATAGAAACTATTTGGAAGAAAATTCTTGTAAGCAAAAATCTTGG------CT---------------------------GCCCAGGAAGAGGCTCTACCACCCAGTGATAGTTCAAAGAAACCT-----GTTCCAGAGACCCATCC---CAATCAGGCCC------------TTCATCTTTCAATTCTCAGCTCACTAG-CTTGATTGTTTAA--------GGTGTCA-CCCAGGAGCCTTTGCACACTGGAAAGCATTTGTGACAGCTGATGGCTTGACTGTGATTGGGT-AATACTTTCACTTTGAGGG-CACATGCTTTATTCAGTAAGCAAGCCATT---AGGAGTAAAGAAGCGCTTCCCACAAGCATTGTGCTGTTCATCTTCTCACTCATGGA------------------------------ATGTA-GGGAGGCAG-GTTGAACACCAGTGAGGTCATTTCAGA--------GTAAAGCAGCCAACCTTCCTCTTGGCACCTAAGCCCCCACTGCTTGAGTTGTTTCCCTCACCATGGCATAGTCTTAAGAGACTGAAGGAACACTATACTTGTAGGAATGGAACCAGCCACATGCCACATATAAACAGAAAGAAAC---------CAGCAGAGAGAAGTCACAAGAGAATGCAGAAGAAGAGATAAGAAGGA------AGGCTCAGG-AAGTAGGCCAAGAAGCCATCAGGATCGTGGGGGAGTTCTGAACAAAGGTGGGTCACCAGGTACTCACCAGAACCACTTCAGAGCTACGGGAACTGAAGACTTCATGGGTCCAGGTCTGTCCAGGCTCAGGGGAACGGTCCCCTTTACGGTGCAACTTCAAGCCAACAGTGTGATGCCCCATGGTATTCAGCAACTGGGTCACCTCACCAGACTGCAGGTTGTCAAAGTAGATGGTGGCACCCACAATCTGGTCCCCTAAGTAAGGGAGTACAACAATCAGGTAAAGACCCACAG-GTCTCAAGAAAGCACCACATAA--CAGCCACTAAAACTGACTTTCCTTTAGCTTCACGAAC-ACCACACAGACATAGTATTGCCCATTCAAGCACAGAGGAGGAAACT-AGCTGGAAAGGCCAACTATTTTACACATAGCTGCAGAATTGGTGAGAAGCGCAGAATCAGATCTGAAGATACAGTCGGTATCCAAGACTCCACAGGACTACCTCCCCTGAG--------ATTCACAAGCAAGACACAGAGT-AGCAAGGGA---CAGGGCTTGGGTACTGACCTTCCTTATGTTGTTAGACCCAGGCCTTCCACAGTCATTTGGTCATTTCTGCCTGTCCCCCTGCCTCCTGCCCCCCCCCCCCGCAG-----------------GGCCCAGTCATTATCCTGAGGAGACTCACCCTCCTTGACCACCCCAGTGCGGGCCGCAGGGGAGTTCTGCATCACCTCCTGAACAAAGACTCCATCATCCCTCTGGGCAATGGTCAGCCCGTGGGAACCACTGCCCTGCCAGTTGGGCAGCAGCAGCTCCCGGGTTGTCTCTTCCTCCTTCTCCATCTGGGATGAGATGAAAGAACAGAGCTCTAGTCA-TGGGGA--------CATGGAGAGTAGTATGGTATATGAG s bosTau2.chr29 31997914 4644 + 45822729 TCCTTTAAGATCCATGTCAACATCTGGCAG-GTCATCTTAGGAGCTCTGAAGTGCATCTCAGGCATCTTAAACTTGGGGCCTTTCAACTTTCCTTCTGGCCCTTCAAGGCTCAGATCTGGAGCATTGATATCTACCTTTGGTGCAGAGATGTCAAGATCCACCTTGGGCAGATTCATATCCAATTCTGGGCCCTCTCCTTTAAGGCTGGGCATGGTGAATTTGGGCATCTTCATCTTTGGCATCTTCAGGTTCCAGTCGGGACCGTGAACTTCAACATCTGGTGCACTGAGGTCTACTTTGGGCCCCTTCAGGTCCCCTTCCAGCTTTGGCACTGTAACATCATATTCTCCCTTTACCTTGGGACCTTTCACATGCAAATCTACATCAGGCATGGAGATCTTGGGGGCCTTGATATTCATCTCTGGCATCCTAAACTTGTGACCCTTTAGCTTTCCTTCAGGTCCTTCAATATTCACATCTGGACCTTCAACATCCAGCTTGGGTTCAGCAATATCAATGTCAGTCTTGGGCAGGTTCACATCCACTTCTGGGCCCTCTCCTTTGAAGCCAGCCATGCTGAACTTGGGCATTTTCATCTTGGGAATCTTCAGGTGCCAGTCTGGGCCATGAACATCCACATCTGGAGCATCAATGTCCACTTTGGCACTCTTAAGTTCAACATCAGGAACCTTAATCTCACCTTCAACCTTTGGCACTGTGACATCATATTCTCCTTTTACACTAGGGCCTTTTAAGTGTAAGTCCACATCTGGTATGGAAATCTTTGGTGCTTTGATATTCATCTCAGGCATCTTAAACTTGGGTCCTTTCAGTTTCCCCTCTGGTCCCTCAATACTCATATCTGGAGCACTGACATCTACCTTGGGCCCAGAAATGTCCACATCAGGCTTAGGCAGGTTTACATTGACTTCAGGGCCCTCTGCTTTGAACCCTGGAACAGTGAACTTGGGCATTTTCATCTTGGGCATCTTCAGGTGCCAGTCTGGGCCCTGGACATCCACATCTGGGACAACGATGTCCACTGTGGGGCCTTTCAGCTCTCCTTCAAGTTTTGGTGCTGTTACATCATACTCTCCTTTTACTTTGGGGCCTTTCACATGAAAATCCACATCAGGCATGGAGAGCTTTGGTGTCTTGACACTCACTTCAGGCAGCTGAACATCAGGGCCTTTAAGGTTGGCTGCCAGGCCCCCGATATTGACATTTGGGGCATCCACATTGACCTTGGGCCCTGAAATACTGACATCACCTTTGGGGAGACTCACATCTACATCTGGCCCTTCCCCTTTGACTCCTGGAGTGCTGAActtgggcattttcatcttgggcattttcaGATTCCAGTCCGGACCATGAACTTCCACATCTGGGGCACTCACATCCACTTTGGGGCCTTTGACATCAGCTTCAGGGACACTGACTTTCCCCTCTACTTTTGGAAGCATAACATCAACACCCCCTTTCACTTTTGGTGCAGCCACGTTCAAGTCTACATCTGCCATAGAGATCCTGCAGGTTCCTGCTTGCCCAGAAGGACCACTAAGTTTGGGGCCAGTCACGGTTCCCTCTAGGCTGGGTGTCTCTATGTCCACTTTGGCACCTTTAACTGCCACTTGAGGGCCTTTAACGTCACCTTTCACCCCAGGAGCAGAAACCTTAATGTCTCCTTTCAGTTTAGAGGACCCAAGGCTCAGATCCACATCCTGCATGGAGATTTTAGGTTTCTGAATAGTCACTTCAGGAGCCTTGATTTTAGGACCCTTCAACTTCCCTTCCAGATCCCCAGAAGCAACCTCAGGCAGGTCGACATTCCCAGAGACCCCAGGAAGCGTCACTTCACCTGTGGGCAGTGTCACATCAATGCCAGGCCTGTCTCCCTTAGAACCGGATACAGAGAACTGGGGGGCCTTCACCTTGGGCACATTCACTTTGCCCCCAGGCCCATGAATGTCAGTGTCAGGAGCTTGAACTTCCACCCTGGAGCCAGAGATGCTGCCCTCAGTTTGGGGCACAGAGATGTCCACCCCTAAACTCCCCTGTGGCTTGGCACCTTTCAGGCCTAGAGCACCCTCAACGGATGGCCCAGTGATCTGGGGGCCCTTCAACTTCCCCTCAAGCCCCTCAGTATTGGCAGAGGGAGCACTGACTTCGGGCTGAGGGGTCTGGATGCTTCCAGCAACAGTCAAGCCTGGTTTGCCACCTTTGTGCCCCACGGAGAGTTCAGGGGGGGAAACGCTCAACCCTGCCTCGGGGGCCTGGCCCTCAGGCCCTACTGAGACACCAAATTTTGGCACCTTCATGGTGGGAAATTTAATTTTCCCGTCA------------AGAGATGGGCCCTGCCCCTCTATGGCCATGCCCCCAAGAAAGGATGAAACGTCCACCCCTGGGACTTGGATCCCTCCTTTGCTACCCAAGTCCAAGCCCTTGGCATTGACACTGACACCCGGGCTTCCCACCTTTACCCCAGGCACGGTAACCTGGACCTTCGAGTGGCCAGCCCCTGGCAACTCTGGGCCTGCAGTGGAAATGGACCCTGCTCGGATGTCCACGGTGGAGGCTGTGGTGGGAGACCCAGCCCCTGAGCCCGAGGGCAGTCTGATCACTGTCTTCCCAGGCTGGGTCTCCACATCCACAGTGGAGATTTCGGTCAATTCGTGCCGTGGGATCTTGATCTTGAACTCTGGGCTGCTGATGTCAATGTCCTTGGCGCCTTCACGGCTTGTCACATCCACAGTGTAGGCTGTGACCCTCCTGGTCACCGTGATGGTGCGGCTCTGGGTCTCCCCAGCGTCCCCTTCCACTCCATCCTCTGACTTCAGCCGAGGCTTGATCTTCGTGGTGTAGATGCGCTGGTACTCCTCGTCATCCCCGCTCTGCAGAAACACACGCCCCGTACAGGTTGCAGCAGAGTCTGCGTGAGTGA-CAGACGCCCGGCCACAGCCCAGCCGACAGTACGGTCACCTGCTCCCCAAAGAAGCCGGGACTGTTAGGGAGGGCCATGGAGCCTTCTGGGACCCAGCATGAGGGGCTAAAGAGAGGGGCTGACAGCCACATCACAGGAAGAAAAC--AAATTATTTGG--GGAAACTCTGGCAAGCAAAAGCCATGGGGAAGACTGGGGACAGTAGACTCCTAGACACTGGGGCCTGGGAGAAGGATTCACAACCAATCCTAGATTCAAGTCAGCCCATCAAGTTTCTCAGACGCCTCCCGGCGACCAGCTCTGTGCTGACTTAGTTCAGTTCTCAGCTCTCAACTGCCTGGCCTTGTTCGTTTAATCCAGAGGGGAGTCCTCTCAGGGACCCTT------CGGACAGCATCGGTGG--------AGCCCAGTTGTGCTGGGCTCAACACTTCCACTTTGAGGGACTCATTATTTGTTAAATAAACAAGCCATCGGAAGGAGCAGAGAAACG--TCCCTCAGGCACTTCGCTGCCCAGCCTCTGACTCACAGACGAGTCCAGGCCTCTGGAAACAGAAAAATGATGTCTGGGAGGCAGAGCTGGGCACCGAGAAAATAATTTTCAAAGATCCTCGCAAAGCAGCCGGCCTGCCTCCCGGCACTTCGGACCAGACTGATC-AGTGGGTCCCCACA-CACAGGGGCCTCTGAGGAGACCAACGGAAGACT----TTTTAGCAGCAGTAGCGGCCACACG-------TGAATAG-GAGAAACAGGCTGGCTCGACAGAGCAGAGG---GAGAGAGTGGGACAGAAAAGCAAGGAAGGACAAGCGAGGCCCAGGAAAGGGAGCTGAGTGGCCA-----------GAGGAGCTCAGGGAGCAGCCGGCCAGCCAGGAACTCACCAGAACCACTTCAGAGCTGTGGGAACTGAAGACCTCGTGGGTCCAGGTCTGGCCAGGCTCAGGGGACCGGTCCCCCTTGCGATGCAGCTTCAGGCCAACGGTGTGGTGGCCCATGGTGTTCAGCAGTTGGGTCACCTCACCCGACTGCAGGTTGTCAAAGTAGATGGTGGCACCCACAATCTGGTCCCCTGAGCAGGAAGGAGCAAGACGTGGGTAAGACCACCCAGAGTCTCGGGGACACAACCCACAACCCAGC-----------ACTCTGCGTTGGGCCCTTGGACTGATTCACaagtgtggtaacacccat---ggtagagatgagggaactgaggcaaggaggacaactaattggctcaaagtggccaagctcctgggtggtg--gagtcagaaccgaggacgcacaacgtctccaa---tccacaggaccgcctcccacgaggACTGTGAATGAACAAGCA--ACAAAGAGTGGGCAGGGGAGGGCAGGGCTTGGGTACCGACCATCCTGATGCCACTGAGACCGGGCACTCCACAGCCACCCACCCGCTTGTG---------CTGCCCCCTGCCCTCCCCTCCACCAGCCTCCCCACTAATCCCAGCCCCAGCCCGCACCCCGAGAAGACTCACCCTCCTTGACCACCCCAGTGCGGGCCGCAGGGGAGTTCTGCATCACCTCCTGCACAAAGACGCCATCATCCCTCTGGGTGATGGTCAGCCCATGGGAGCCGCTGCCCTGCCAGTTGGGCAGCAGCAGCTCCCGGGTTGTCTCCTCCTCTTTCTCCATCTGTT-TGGGATAACGAAACAGAGCTCAGGGCAGTGGGGGTGGAAGGCCATGGAGTGGGGCACTGTCTCCAAG a score=37818 s mm7.chr19_random 13387 2280 + 2598976 CTGTGGAAGCTCTCACAATACACAATAAAGACAGAAAGGGGGAAACCTGCCCTT-----CGATCCA-----CCCATGGCACAGGTCCAAATGGTACA-------CCAAGTGTCCAGCATGCCCGATCCTATCCTCCATTCCTCTGCACCATTCCACTTACTAACCTTTGCAGGACTCTGCTCAGGAGCAAACGCCTTGCCAGGAGCCCGCCCCTCCTTCTTCTCTTTCTGTATCGGTCTCTCTCTCTCTTTCTTTGCGAATCTTGGTCACACAACCTAGGAAAAATTTCACCATGATATTCACCCCCATC----------CTCTCAAAACTCAGTGAGCTACCACCCAAATGACAGATGA------ATACTGAACCCCAGGG-CAGGCCAAAACTCTGGTCCCCACTACACTTAGTAACT--------ACATGACTCT-GAAGCCCATTGCTACAGAAAATGAGGTTAAAGGAAAGTGGAATAGGTttctaacat-----ctgcgtcctcccagctatcggactcctgccaaggacacttaacctctctgaacctatgtttctttgtctgtgaacatggaaatagtaa--gagttccatgcagacTGATGAAATATAAGACAGCAGCAGC------------TCCACGAAGGCTCCACAAAACGCTCATGTTCATCAG--TCTCTAGAATAACT------------------GGTCCTACAGT-CACAAGCAGAGGCTGAGACTCTGAAAAGCCCATTTGCCTGGAGTGCACATAAAGAGGGTGATGACACATATATT-----TCTACGGGTCTTTCC--GCTATGCCAACTTCAGTCTATACCTCTTCACTCATGTGAGACTGTTCTC-------------------------------------TAAGCATGGATGGTGGCATCCACC--CCAGTGACAGTGACTCAGCTTACTATCTGTAGCCAGGCCCCCAGGACCAAAAGGACCCCTTACCCGCTGGAAGTTCCATAGCCATGCTCCTGGTAGTGGCCTAGACAAAGA-----CAATCCCATCCCCACTAGGTTCCCAAAGCCAAAAGCCTT----------------GCTTGGGCCCCTAGTTAGTCAAGG-CAATATGGATGCCCACAGTGGACCCTAAGATAGA-CACTATAGGTGAAG-----GTGTTCCTCCTTGCCATAGGATGAGCTATCGGCTGCAGAGGTGCCCTGGGAAAGCACCCAGCAGAATGGTGAATATGGCAATGAGCTACAGCCACCCACACAAAATACCACTGGCAGTCGTCTAAAAGCATACCTGTGAAATTGTGTGAAGGACTCTATAAATTGTGGTGAGCCTCGCCCAAAGCCCCACCCTGAAACTGTTTACATCCAGAAATTAGTCAACCAATC-ATAAATACATGTATCCCGATCACCTCCTGCATGTCCGAGTCTATACTAGATGCTGCAAAGGAAATCAG---------------CCCAGCCCAGCACTTAATTGTACACTGCATGAGGTCGTTACCTCCCAACACTCATGCATCCTCTAGACCTTTATTAAACGCACTCCCTATGCCAGATATGGAAATTTAAAACACTT--------------------------------------------------------------GAGTCCCATCTCC--------------------------------------------------------------------------ATACAAATGATAAACAAGGGACTCTGGGTGTGGCTAACTGGGCTCCACAATGTTCCAGAAGTCTTAAGAGGCATCT---CGGGGAATGAAATATAAATGAGGCTTCCAAGGTGCTGGAGCGAACCTCCAGGATGGAACAGTAGCCTTTAGAAACCCATG-GCACTCAGCAGGTCCAGTCTCAGGCAGAAACCAACA-----AAAGATAAACACACACAAACCAAAACCAaaacaaacaaacaaacaaacaTCCAACAACCTAGATCACCACACCTGTTCTCAAAC--TTGACAAACTCATAAACACAGTGTTTATCATGGGCCTACTTAACAACACAGGTGCTGGCTAGAGAGTAAGAGAAAACAAGAGAGAAGCCTGCTGGTGCAGGTTTGAGCTAGGGAAA-CACCCCCTCCCTTCCCAGCAGGCAAAAGAGGCTACTTTAAGAGTAAAGCCACACTGACTCTTTGCAACTTGAAACTG-----GCACTGGCTT-----GTC--TGCCCTACCCTGGACCAACACTGAGAAGCCAGACTAGAAGTCA-----GAATCCCAGCAGAAACAGGAAAGTAAAAGTCTCAAGCTCAAACACCTAAGAA--CTGAAGCCACCC--ACCCTTCAAGTTTCCTAGTCCCCGC-CTTCCTCCTTGTGCAGGGCCCC-TTGCTCTGCCAAACATCCTGGTGCTGAGCCAGCAG-------AGGAGAAAGAGAGCC----AGCTCACTCTCACCCACATGGTGGCCCCACCCTGCCTCCTTCCACAGTGAGTCACTGCAGTCTGCAGCAACAGCTCCAGACATGCATAGGGTCACGCCTAGAGCCTAGTCAATGCAATACCTCCTAGGCCAGGCACCCAAGTAC s bosTau2.chr29 32002616 2403 + 45822729 CAGTGGATGCAACCACAAC------------------GGAGGTAATCAGCCCCTCACCCCGATCCAAGCCCCTCCCCGCCCCGTGCTCCGTGCTACAGCCCCATCCAGGTCTCTACCCTCCCCACTCC--CCACCCGCTCACCTTC-CCCTCCCTCCTACTGACCTTCGCAGGACTTGGGTCAGGAGCGGATGCCTTGCCAGGAGCCCGCCCCTCCTTCCTCTTCTCTCCTCAGGGTATCTC-----------TTGGGAATCTCGGTCACACTGTCTAGGGGAAAGGTCACAATCAGGTTCTCACTCAACAGGTGGCTCGCTCGCAGCCCCACCCCAGCCGCTCTGCAA--GAGAGATGGCTGGATGTCCTGTCCACTGGGGCCAAACCAAAACCCCAA-CCCCGCTACTGTCATCAACTCCGTTCACACGTGACTCTCCAAGGCTGGgatcacgggaaggagctttggaagaggccagactcagattccaatcttggcacagcatcttgccagctgtgtgacccaggccaaat-cacttaacttctctgaacctccatttcctcatctgtgcaaatggagacaataaaggatccccatgagggctgaaggaaggagaaagagcatgagtggaaagctctGGCCCACGGGAGCCTCCCCAAATCCACATCCTCACTGGGTCccttggaacagcttcaggagggagatgttactgccctacagcgcagatggagaaactgagattcagagaggCCAGCCGGCC-GGGGTCCACCATAAGAGAGCAAC-ATGCTTGGGCTCTGAGCCTGTAACTCTTCCCTTGACACACCACATCCGGTGTGCAGCTA-TAACCCGTGTGAGATCCCCCTCCTCAGAGCCTCCAGCCCTGGGGGTCATGGGCAACCTGCAAGCCGGGCCGGTGCTGGCCAAAGGTCAGCGACACTGGGTCACCCTG-----TCTAACCCGGCCTT--GGGTTCAGGGGGACACTTGCCAGCTGGAGCTCCAGGGGCCCTGCTACAGGCAGAGGCTGAGCAATGGAGGCCCCAGGCCCCTCAGCACTGG---CCCAAGCCTGAGAGGCTGCAGTCCAGGGGCGCCATCTCAGGCACGTGGCAAGCCAGGGCCCATCGGGCTGCCCCGGCTGGGCCCGGAGCCAGGTCCCCATAGGTGAGGAGCAAAGACACCCTCCAGCTAC------AGCTGTTGGCTGCGGGGGCACCCGGGGAGA-----CAGCAGGCGGGC--------CTCCAGCCTCCAGCCATCCACACAAAATGGCAGCGGCAGCCACCCAGAAGCACGTCTGTGAAACCGCGAGGGGGCGCTATTAAGTCGTGGAGAGTTTCGCCCAAAGCCGAA-----AACCCGCTGACATCCAGAAATCAGCCAACCAATCAATTAATACATGCATACCGATCGCC-CCTGTATCATTG------TACAGGCCGCTGCAGAGAAAACCAGCAAGGGACGGAGGCACTCAGCCCAGCTCTGAATTACACGCTCCGCGAGGTTGTTACCTAACGTCACTGATGTATCCTC-----------CAAACGCACTCCACGGGCCACATATGGAGAGTTAAAAGACCTAGTTCCTGgaacttccctgatggcccagtggttaagactccgagctcccaatgcaaggggccaagttccagccccaatcaaggaactaacccacatgccacatggcaaagccaaaaaaaaaaaaaAAAAAGATTTAGTTCCTGTCCCAGATATAAATTATGAGCAAGGTGCTCAGGGCGTGACTAATCTGGCCTCAGAATGTTCCAGAAGGTTTGGGAGCCTTCTGGAGGGGGGATGAAATCTAAACGGGATCTTGAAGGTACTGAGTTTGCCTTTGAGGATAAGA------TTTATGGAAATTCATGAGCACGTAGGACTTCCAATGTCAGGCAGATCATAATACCGATGAAGACAGCCACAGACA-------------------------------------------------------CTGTTCCCCAACCACCGGTACTCTCGT----GTGGTATTTA-------------TGTCAGCGCAGGTGCCGGCCAAGAGG----------CCAGCGGGCAGCCTGCTGGTACAGGTGTCAGCTGGGGCAATCACCTCCTCCCTTCCTACC-------------------------GAAGTCCGGCTGACCCTTCCCACAGAGAAACAGCAAAAGCCGGGACTTCAACAGTCCTTCCCCCAGCCT---CCAGCACTGAGTAGCCAGCCCGGCAGACAAGGGGGGAGCCAGACCTGGAGGGGAATAAAAAGGCTTC---------CACCCAAGGGCTCTGCAGCTCCCCGAAGCCACTGAGTGCGCTGGCACCCTCTCTTCCTCCTTGAGCAGGGCCCCTTTTTTCAGCCTCGCATCCTGGTGCTGAGCCAGCAGCCGGCAAGGGGGGCGGAGAGCCAGTAAGCTCACCCTCGCCCACATCTCAGCCCCACCCTCCCTCCTTCCCCAGTGAGTCACTGCG----GCTGCAACAGCTCCAGACACGCCAAGGGTCACACCTAAAACC------------CGCTTCATGGGCCAGGGCCCTGGGTGC a score=6476 s mm7.chr19_random 15695 480 + 2598976 GAGCCCTGGAACAAGGGTCCTTAGATGCC------GAAAGCACTGAGGACCAACCTGGACTTGCTGTATGTGT-CACTCAGTAGGTTAATGAGCGAAGTTGAAAGAGGTTGAAAAGCTCTCAACCACAGC------AAAAAGGAACCACCGGACTC-ATGCCACAGGTTGGCCCTACC-----------------------CAAGTGGGTCTGCCAAGCA-CCTGTCTACTGTGCCACTG------------------GCCAAGAAGGACTCCCTT---CTCAACATGCAT-GGTCCTGAAAGC-CATGGTGACGCATACGAGAGATGGGAGGCCATGGTGGCAACAAACTTTGTTTTCTGCATCTGGGCAGCAGCTCTTGGTCTGTCCTCCACTAATGGAGCCTGTAGCCAGCCCAGATGTTC-CTCCCTCTCCTCCCATA---AAGGTTAAGTCGGGCCTCCAGG-----------------------------TAAATCAAAAAGATCTTTGAAGGTTGGGAGAATTCTTCACAAT---------TCAGTCACTCATCACAAGCCTTTGGGGCTTGAAAA s bosTau2.chr29 32005077 564 + 45822729 gagcccccggcccggagcccccggAAGCCCAAGTGGGAAGCTCAGAAG-----CGGGGATCAGCCACATGCCTCCACCCCAGGGGCTAATGAG-AAGGACATCATGAGTGGAGAAG----GGACCACAGCTTGTGAGAACGGGAGGTGCTGGATTAGAGGCTGCAGGTTGATCCTGGCGGGGCACCCGCTGGCTTCCCAGTCAGGTGGGGCTGCCAACCACCCTGCCTGCCCTGGCTCAGGCCTCACCTCCTGGCACAGCCAGGCAAGACTCCCCTCCCCTCCCCTTACATCTGACCTGGCGGTACACAGGGGTGCTGACAGGGGATTCGAGGCCACAGTGGCAAGGGCC--TATTTTCTGCACTTGGATCCCAGCCGGTGGTC--TCCCCCACCCCTGGGGCCTGTAGCAAACCCAGGGGGTCATTCCTTCTTCTCCCACATGTCAGGTGAAGCCAACTTTCCCGGGGGGCTAGGGGCTCCACCCTGCTGCTGCCCAAAGCAGA---GTCTTTGGAGCCTTGGGGAATTCTACACATTCCTCAGGGGTCAGAAGCTC-TCA-AAGCCCTTGGAGCTGGAAGA a score=6943 s mm7.chr19_random 17022 678 + 2598976 ACATTACAGGTGCCTAACAGTCAC-------TGCCATATTTAGACAGCAAGGGTATGCAAAATCTCCCCTCCAGT----AGCATCCTAGAGGACAGCATGGCC-GCTGCTCACATACAGGGAAAGGAAGATACACAGAGGCTAGAATAGGA-AGGGTTAGA--CCTAGAGAATTCAGGTCTGCTAGCTCCAGTCCTATGACCCAATAGAGATGAACATGTTATCCTTTGTGATGAGAAGAGGCAGGATTGCCGTGGAGAACCCCTAAGGCAGAGGGTTGCTTGGGG---AACACAGGACTGAGGTAGTGAGAATGCTCT-------AAGTAAAAAAC-CAGA---AAGGACTCAGAGATAGAGCATGA----TTCTGCCCAAATGTCATAACAGAAT------GCCCCTTCTGTAATTCAAAATCACAAAatatatatatatatatatatGCAGCAAAAACATATGTGCCTGCTACAACAGGGGCTGT--------AGTGAGCGGATCCAGAGGACTTCCAAAAGCAGACGACAGTCCTGGCAACAGACAGT---CCTGGCAACAGACAGTCCCGGC-AACAGGGGCCTCC-AGAAGACCATTCTCTCCCCTCTGTCCTCCGAGAACTGGGCCGTTCTCTCTTCCC---------------CACAG-----GTGAGAGCTCAGGGCAATTGCTGCTGCAGCGACAGACAAC--------CACTGTATGTGTCAAGATGACAGGAtctctcattctctc s bosTau2.chr29 32005852 717 + 45822729 acatttcacgagctcaacagccacgcatggctaccatattacaagcccaa----atacagaacactgccaccactgcagaaagttctgtgggacggcactgCCTGCTATTGACAGATGGGGAGAGTGGGGTCTGGAGCCCTGAGAATGGGGGAATGCTGGGGCCCTAGAACGCCCAGGTCTGCCAGCTGC--CCCTGGCACCTGACACCAGCTCACAG--CAACCTTCATGGTGGGAAGGGCTAGA------GTGGAGACCCTCTAAGGCAGAGGGCTGCCTGGAGGGCAAAAAAGGAGTGACGTGGCAGGGACACTCCCGCTTCAAGGCAGAGGACGCACATCTGAGGCTGCAGGGACAGAGTGCAAGAAATTCAGGCCAGAAGCAGCTAGAGAAGAACGAAGCTGCCCTGATGATTCAAAACCACAAAGAGGATGTGCAT--------GCAGCAGGGT--TCTGCCCATGCCATCTCTGCAGATCTCTGCCCTGGGTGGGCAACACCCAGGCAGACCCAGGAGAAGAC-------CAGGAAGCAGACCCTTTGCCCGGGGA-AGATGGTCCCCGCCAGCTGTGACCCCCTAGAAGGGCATGTTCTCCCACTGGTCCCAGGAAA---------TCCCTTCTGCCCGAGAGCCAGTGTGAACACAGCCAGGGAGGGGGCGCAGCCTAACTGCTGCAGCAGCCAAAGACAACGTCGCAGCCAGGGTCAGTGTCAAGACGACAGGAACTGATACACACAC a score=4325 s mm7.chr19_random 17740 412 + 2598976 AAGCCAAG--------------CCCTAGAACCTCAATGGCTGAATAGGCC-TGTACCAGAAGGACACAAGGAGTGGATCTGCATAATACTCAGGGAAGAAAAAAGTCCTCC-GCCTACGTCAGGGAGGGCCTTAGTAACTGAACCTTCCATCCTCCTGCACCCACATGCTCTAACTAACCTGCCATACACACGAGGCCAGGGACACGGAGTTTCCATCCCAAG-----AACATAATGACTCATAGCTAGGATTAGAGATCTCCACCAGAGGGAAAGCTCTGA---CACTCCTAACCAGGTG--AGGGGTTGG-ATAGTCAGAGA-------GACACACCCGGAAGGACGATAGATATGCTGTCATAAACACTCCC-----CAAAGGGAAAGAGAGAGCTGAACACTGA-----------CCTGCCATCAGTAGTTAAGCGAAggagtt---ctaagatctctcag s bosTau2.chr29 32006623 433 + 45822729 AAGTCAAGATACACAGCAGGTCCCTCTGGACCTGAGTTTCTGCATATGCCCTCCAAAGGCAGGACATCAAAGGTG-ACATGC--------CAAGACGGAAAGAAGCATGCCAGCCCGAAATGGGGAGGACACAGACAGC--AACACTTCTACCTAG------CACACGGGCAAACTGACCCACCAGACACAC-AGGCCCCAGAGAAGCAGT----ACCCCAAGGTGAGAACAAGATGACTCAGAACCAGAGCT-GAGACTTCCACCAGTCAGAAAGCCACGAACACACACAGAGCCAAGGGCCAGGGGCTGGGATATTCAGAGAAAAGAGAGACACACCCAGAGAGGCCATC----TACTCTCGAGAACTCACCAGGCTGTAAAGAGGAAGAGAAAGAGCCACATTAAAAGAAACAACCCCTCCCA-----GGTGAAGAGAAAGAATtttgccaagctcccatag a score=642 s mm7.chr19_random 18393 647 + 2598976 ggaggaggataacaactggattgtaaaaaaa-----GATTAAAGATAATTAAAAAAAATTCTCACCAAGAAAAAAAGA---------AGAGAGAGAGAAGGAATTCTGCAGAACCGTGCCTGCCAGGACTGTGCCACTGTTATCCCTTTCTTAGGGTCTCATCTCGTGTACAAGCACTCCCACAGGGGTGAATTAACATCATTATTTTAGGACTATGGAGACTAGCCCCAATCTAACAGTCTTCATCCAAGCAAAGAGATCAAGACGCAAATATACATATAGGATGAGACACATGGGAAACCACAGAGAAACACCCATAAGGCAAACAAACACCCAGAAGCAAGTCCTGTGCTG-GAGCAGGAGAGAATGAGCCAGAGGGAAGCACCCACCAGAAGAGGGCAAGAAGCCTTGCTCCTGCATTCCACCAGCCTCATGACGACCCTACC--------------------TAGGCAGAGTTGTAGGTACCCCGG-GCCCAGCATTTAAGGAACCTTT--ATTCTGGGTCTCTTTGAGACTGTGTCTCCAAGAGGCAGGAATCCTAAGATTTTCAAACGCTTGAACTCTCCAGAGCCTAACTCTGGATCTCTCTTGGGCCAACGTGGAAGACAAGAGATGCTTTTCTCTCTAGCACTcaacctgagtgggatcaacaga---acccacatgg s bosTau2.chr29 32007249 532 + 45822729 GGAAAGGGATGAAGACACGAATAAACACAGACACAGGATGAGAAACCACAGAGAAAGATGC---ACAAGCGAGAGAGATCTACGTGGAGGGAGGCCCAGTGAGCGCCGGAGAGACATACCCACAGGGGGCCGGACA----------------AGCCTCCAGACTCGTCCAAAGAGAGACCCACAGAG--------------------TGGGACCAGGATG--------------------CTTCA-------GGGGATGTTAAAACACAAG---AAAGAGAGGGCTTGAGGTTTGGGTAGGGGCAG-GAGACCCCCAGGAAGCAGT----------GATGCCCATCAAGTGTCACAAGCATAGGAGGA-------AAGGTGAGTGGCCACCAGC-------------CTCTGTGCCCACA---CACCAGCCTCGTCCCGACCCAGCTCGGAGACCCCAAACCCAGAATGGGCAGAGCCCCAGGTCTCCCAAAGCCCAGGATCTGAGGGCCCTTGTGGTTCTAGG-CTCATCAGCACTATGTCCCTAGGACTCAGAAGTCCTGAG-----------------CTATCCAGAACGCAGCTC------------------ACCTGGAGA---------------CTCTCTGGACCCCAGC--AGGTGAGACCAAGAGACAGGCCCACCTGG a score=36146 s mm7.chr19_random 19454 2602 + 2598976 GGGAACTTTCCACTTAT-----------------GGGAGG--GAAAGATCAAAGAGAATTAATTAAACCAACA-------AGACCCAGATGACCTGGATATTGGAGGGATATTCAGAGA-----AAGACATAAGGGGGAAacacacacacacacacacacacactac----------acac------GTGCAGAA---GCTCACAGAGACCCTTGTCAATTCCATCTCCCACCTTTCCC-AGCGTAGGCAGTCCTCTTGGTAAGCTTTATGGCTCACAGCGGGTATCTGCCACCTGTCCACCTGGTACTCAGATCCCAGGGTGTGCACCT------TCCACTGTGTCTGTCCTTCGAGCGTCAGCCATGCCACCACAACT---ACCAGAAGGACGTTTCACCAGCCTC---------CTTTAGCATCCCC---------------------CTCCCCAGCATGCTGGGTTTT----GCTCATTGACTTCTAGGACAGCCATAATCAGGACCATAACTGC-TTCTTGGTTTCCAACTCCTTCTCTCGACTCGGGCCACACACGTTTCCCCACAACT------------CTTTAGAACAAGTGGCAAGCCCTAAAGCTCTAAATTCTCACTTCCAGCAGGAAGGGAGAGTCCCTCTCCCTCCCCTAGCTAAGGGGCCCTCCACC---------------TCTCCTAGTGACAGAGACTGAAGACAGCATTGTATTACCCA-GTGGAAACTTCCC-CATCAGGGCACAACACCAAGGAAAAATTGGCCTT-AGACAGAACTTCTGAGATTAAAACACCAACTCTAAGGGCAGTGTCCTATGGTTGGGGAAC------CTGAG--------GGAGAAGTTTGTTG------------TTGCCTTGTGGGGTAGATTACAGTTTAGACTATACCCTGTGCCCCACCCAGCTCCCTAGTAAGTGCTGCATGTTCGCCCCCCAGTGGTCAAGCCATG-TAGCAAAAAGACTCAGAGCCAGGTCTTCAAATGATGGCTGCAATGCTCCCTCCCACTCCCAGCCTAGCCAGGACACGTAGCCAGGATCAGCTCCAGGCACTTCCCCTTCCCCCAGAACCTCCGCTCCAGGCCCCAGGGACCAGG-CAGGATGCCGCTCCCTGACAGGCCGTATGCAATGCTTTGCCCAGCTCAACCTCCATGTGTGGGGACTATACTCCCAAGACTGCCCT-ATCCTCCTTGAGGGCCTCTAGGT--------CATGGCCTGGACCTGTGCAGGACAAAGGAGCTCACTTGAGTCCATAAGTGCAGTCTCCATACA-CTGACATGGAACTTGTACCCC--------AGAGTAGTCAATCAGTCACTGCCTCTGCCCTCCAAGTCCCGGGAGGATAACAGAGGTGACATATCCAGGTTTACCACAGTGTGAGGACCCCATGAACAG-GACATCCTCTCACAGGCAATAACACCAACTTCACTGAAAGTGAACAATGACTC------CTGTAATGCAAACAGTGACGGGCCCAAGACCAATTATTTGAGCTTTAGCA--CCAACGGA--AACTGGGGCTAGGAAAGAGAAAGGGGGAGCTTCGTCAAAGTACACAGACATTTCCGCAGAA---ACATTGCCACAAC-----AACCCCCGTTCG------GACACTTTTTGGACACACTCAGACATGGACGATACTAT---GATCAAGAAGGCTTTGGAAGCCGGCCAGATGATCCAATGGTCAACTCAAGGAATTGCAAGTTCCTGGGAGCCCTGGCTGAAGCCTG--AAGGGGC-----------------------------CCAGGTGTATTG-CACATTCTAAATTGGCAGCCACCTCCCTTC-----------CTCTAACCCAAGTGAATATAAGCACGTGGTCAGCCCAGCCCCAAGGAGAGAAA-------------CTTGGGGGTGT------------------CCAGGCAAAGATCCCTTCAGAAGTCGGACTAGCTCTCCCAGTTTGCTTCTCTTGTCTGTCTCCAGGCAGTTCCCAAGTTCTGAAAAAGGTAGTGACCACACCCCAGTGCCCAACACA-TCCTCCACTCCCACAGCTTTACCCCAACCCCTCAAACCAGCTCCTCAGGCTCAGAGTGGTGTGCTCTGCCAGAACCCGACAGACAGTTCCAAGTGGAGCGTA-------AGGCCTGTAGGGCTCTG--AACCTCTAAGCAGAGCCTCTCTAGGCCTGAAGTGA-------GCTCCCCGGTCTACTCTTT--------------------CTCTCTCTT-------------------GTCCTTTT-----------------CTGGACTTGGAG------------------------------CTGTGG--------------------AGT---GCTAGGCCAAGACCCTCAGG-------------------------------GTATCACTGCT---GACTTCCAAACCATTAGCACTAAGTCTTGGATGACTCACGTGCCTGTCTCTCTGAATGTCCTGGTTCTCTTCACAATGTCCCTTTGCATAATCTCTTAGGGACAAGAGCTTTAGAAAGGAGTTCAGACATCTTCCA------GATGTCATCCCTACGCCCCCCTCCAGTCCTTTACTAGATCAGCTCCCTTGTTCCCAGTTCCTTTCCCACACTCCCCTTGCCCCATAACTCAGCTCAGGCCGAGGAAGTGGCCCTTAAATGAGGGGTTCCCTTCTACTGCACAATCTGCACACTCTACAGACCAGATACA--GGCCTGCCCTCCCCCACACCCCCATAGTTTTTCAAGAAAAGGAAGCTACTAGTTCATTCAGCTTGGGAAAAGGAA-AAGAGACCCACCCTACCCCCAGAGACTTCCCTAATAGGGC------------AGGACCAAAACAG--TTCTACTCACCTAAGCCATTCTCAGTGTGGG--GAGAGGCCCTAAACATTGCCCACATTGCCCATAGCATCTTC---CTGTGTGCCCTCCCCTCTCCCAGTCACCT s bosTau2.chr29 32008063 2820 + 45822729 GGGCACTTTCAACTTGCATAGGGTGTGTGTGTTGGGGAGGTCGAATTATCATCGAGAATCTG----ACCAACATGTTGCAAGACATGGGCAATATGGGCACTGGTGAGATGATCAAAGACTCGCAAGGCCAACAGACGACCCACCCA-ATGCATGCAGAGACACTCCTGAATCCCCAACCCCTCCCAGCCCAGAGCAGGCTCACAG---TCCCTGCCTCCACCAGCTCACAGCAGACTCGAGTCTGGGCAGCCCC------AAGCCCTGTCCATCACGGAGGGAGCCTGCTTCTTGTTAACCTGGTGTCCAGAGTCT---GTGTGCACCTGCGAGCTCCTCCCTGGCTGCC--TGGGCCGCTGGCCCCGCC--CACACCTCCCACCAGGAAGAAGTTTCTCCAGCCTCATCACCCAGCCCTATCCTCCCCTCCAGTCCCTCTCCCTGGCCCCTCATCACCATGCTGGAGTTTCCCTGCACCTCAGCTTCCAGGGCAGCT----------CCCTACCCCCACCCCTGGGGGCCAGCTGCTTC-CAGGGCTAGGCCCAGAGGTCTTTCTCCACCTCTGTCCCCTGGCCCCTCT----CACTCCCCTAGCCCCAGTGGTCCAAGTTCAAGCTTCCAGCCAGAAGAGAGATTCTATCTTCCTTCCCTGACCCAGAGGGACTTCCTTGTGGAACTGGGGGGTTCTTGGAGTGGGGGGGCTCTGGGGCAGCTTTACATTCCCCATGCGAGCAGTCCCCACACCTAGCCACCTCTCCAGAGAAGAGTGGGCCTTGACCCAGGACAGCTAGGATGAAGACACCAGCTCAAGGATGTGGGGTGGGTGGCTGGGAAGCACCCTGCTGAGTTGAGGACGGGTGAGCTCACTCCCTCTCCCAGTCTCGCCCTGGGGGATAGATTACAGTTTGGGAGCTACCATG------GTCCAGCTCTC---------------------CGCCCAGCGGCCGGGCCCCGCTAGTGCAGGGGCTCTCGGCCAGGC-------------------TGCTCGGCCCAGCTGCCAAA-GAGCCA---CCCCCAGCCTGG-------CCAGGCGCTTCCCCTTCCCCTAGAACCTCCGCTCCGGCCCCCGGGGGACAGGGCAGGATGCCCCTCCCTGA-----------------------------AGCCTCCATCAGCCACGGCCTCACGCCCAGGCCTGTGCTCACCCTCCCTCAGG-CCTCTGGACACAAACTCCAGGGCCTAGAACTGTCCAAGACAGAGAAACTCACTGGAGTCC---------TTCCCCCCGCAGCCCCCATGAAACCTCCACCACCACCACCGGGCATAGTCCCACGACTAC--CCCCTGCCCGCTGCGCCCCAGACGCA-AGCAGAGGTGACGCATTCAGGACT-------------GGCCCGCCAGCCAGAGACGCCCTCTCACAGGTAACATTCTCAGCT---CTGACA-TGAGCAGTCAGTCTCAAGGCCACCATG-AAACAGTGAC----CCCAGAGCTGGGACCTCCCCTACAACAGCCCATCTGGCCGTCTGGAAGCTGAAGGGAGGAAGAGGGGG-TCCATCAA----CACACACATTCCTGCTGAGCCCACTGTGGCCCACCCAGGAGACCCCCGCTCCCCCCACTATGCCTCTTAGGCTCACCCAAGCCTGGAGGAAACCAGTCAGCTCGGGAAGGCCG-GGAGCCCAGCGGGATGGTCAGA------GCCCAGGGAAATGCCAGCTCCCTGGGAGCCTGGATGAAGCCCGTCAGGGGGCAATGGGACAGCAGAAAGCCCTAGCAAACACCAGTTGAAACGTCCCATTC-----------CCACCCCTCTCCAGGGGCGACCCCCCTGCCTCATGTGCACAT--GCCCCTGGTCAGCCCAGCTCCAGGGAGAGAGAGAAGCTGGGGTTTCCTGGGTGTGGTGGGGAGGTGAGAGTCAGCAGGGGAGAGTTACCAGCAGGAGTCGGACTAGCTCTGCCAGTCTGCTTCT---GCCTGTCCCCAGGCGGTTCCCAAGTGCTGAGGAAGGTGATGACCACACCCCAGAGATCCACACACTCCTCCACCTCCACAGCTTCGCCCCAACCTCTCAAACGAGCTCCTCAGGCTTGGGGTGGCGTGCTCGGCCAGGGCCAGCCAGCCCATTCCAACTG-AGCCTAGGAATCCAGGTCGGTGGTGCCCGAGAAACCCCCAGCCGAGGCCTTCCTGGGATGAAGGTGACCCTGGGACCCCCCTGCCCATTCCCTGCCCTTGACCGATGATGGCCATCTCCCTTCACAGGTCTCCCAGGAGTCATTCTTTTGGGTCCCACTTTGAGCCCTGGACCTGCAGTCACATTCCCCTCAACTGGCTGACTCTGCTCCGTGGGTGGGAGGGGAGCCAACCAGAGTCTGGCTGGTTCAAG-TCCTCAGCTCTTCACAAACTTGCCCCGACAAGGACCCCCGAATCACTGCTTCGGGGCCCCCCAGCATCAGCAGTAAGCCC---------CACCTATGTGGCTTCTTATGTGTCCTGGCTTCCTGAACAATGTCGCTGCGTATAACCT-TCAAGGACAAG-GCTTTGGGGAGGGCCACAGACACCCTCCGATCCCCGTTGCCAATACTCCAGACCCTTC--GTCCTCTGCTAGCCCACCTCTCATGCCCCCACCCCCCTTCCCGTCCTCTCC----CCCCCACCTCA-------------------CCCCTCAGCTGCGGGCTCCCTTCT-CTCCCCACTGGGCA-----TACACACCCGAATCAAGGGCTAGCCCAACCCATCATCCT--TGGGGGCCAACGAGAAGGAAGCTTCC---CCAATGAGCTTCAGAAAGGAAGTGAGTGCCACACCCTGCCCC-AGGGATTTCCCTCCTGGGGGCAGAAGAGACAGAGCACCAAAGGAGAATCTTACTCCCCGAATTTAGACCCAGCCCTGGTGAGGGGGCCCTAAA--------ATGCCTTCCAATGCATCTTCAACCTCTCTCCTTTCCCCTGACTCCGTTGCCT a score=3269 s mm7.chr19_random 22084 351 + 2598976 ATGAATCATTGGATCTTGTGAATTCATCCCA-TCTAGTATACGTTAGGTACAGTA-----------AGATGGTTCCTGCCATT----GCTAAAGTTTAA--GGGCAAACTGTTTCAAAACC-------ATTTGTTGGGAGTCCTTTTTCTCCTGGGAATTCCAGGTCACTTTCCAAGGATCCCCCACCCCC-------ATCCCCCCAACTACCTCCAGAAGCTTTTCTGCAAATCCCCTCCACAGAACAGGGACATTGAGACAAGTACCCCTGGACACGTGTGTCCTCAGAGACAGCCTAGG-----GCCACACCCTGCCAAACCAGGGTGCCAACCCAGACATCATGCGCACAATCTTCTGTGGTCACATTGTGCAGAAGTGACAAT s bosTau2.chr29 32010906 356 + 45822729 ATGCATCACTGTGTTGCCCAAAATCAACCCAGTCTCTCTCACGTTCTAGGCTGTGCACCACAGGGCACACAATCCCTGCAGTCAGAGGCTGGATCCTAGTCGAGGAAACTGTTTCAGAACCCGGAGGTAACTCTCTGGGTCCCTTTTCCTGCAAAGG--TCCAGGACCTGCGCTAAGGACCTCGCTGGCACGGGGAGGATCCCAC------------GGTGCCTTTTCAGAGATCCACTCCGCAGAACAGGGCACCCAGCAGCAGGCTCCCTGGGGGCACCTCACC------ACCTCCTGGGTGGCAGCCACGCCCTGCGA---CAGG---------CACACACGAGGCTCACAATTCTCTGGGGCCACAACGTGCAGAGGCGCCAGT a score=43525 s mm7.chr19_random 22520 939 + 2598976 CTCCACTCCATTTGACTTGTAGGATATCCCCGGGTCACCCCAAGAGTCTTCAGTGCTCATCGCCATGTACAGCTAGCCCTGATGTCAACCCAACGCCACCAAGGTTCTGCGTCCCCCAAATCT----GCCTCGGCACTGAAAGGGGCTCCA-----GCCAGAGGAGGCCCAGGCTCCCGCACACTGCACATCCCCTCCCTGCATGGGAAAGCCTTACATAACACAGCTCTCTGCACACACCCTAAGCATGTTGCCTTTCCAACCCCACAGTAGGATCTTGCCCC-CCGCCCTCTCCGCTGGCGCGCACTGCAAAAGTGAAGGGTTCCAA--AGGAGAGCAGGGAAGTCCTTCACCTACGCCCTGCG--CTCCGGCCCCCACCGCCTACACACGGCCTCTT-TCCCCCTCCGCTTTGCccctcacccccacccccacccccGAATTCTGGTTTGAATTAGTCACCGGCTCCAACCACTACATTCCTCAGGCTGCTGGAATCCAGCCAGGCGCTGGGGCGGGGGCCATCCCGCCCGGACGAGTTTGGGAGTGGGGTGGGGTGGGGAGAAAGCACCGCCCCTAGAAGGAGCAAGGGAGGTTCTGGGGACTGTGTCGATTGCACAGCCCC-CTCCCCGCCCACCC--AGCGCAGGAATCTCCCTAATTATGTCCCCCACCCCCCCTCCCACTCCCACCCATCCCACAGGGAGGCACGCTGCAAACTTCCAGGCTCCGACGCCCTGGAGAAAGAAGGGAGTTTT-CTGGATCTGGAAACACAGAGGGGCAAGACTAGGGCGGGGCAGTTGAAGGGGAGCTGTTAAAGTCGCCGCTAGGAGCCAGAAAGGGAGAGGCTGGTGGTACAGAGCAGGGTGGGGCCGAGGGGAATCCGGACGCGAAGTTCGAGATGGAGGTGTGGGGAGCCGCGAAAGACAGCAGAGGGGGCACGCGGTGCAGGGGCG s bosTau2.chr29 32011300 867 + 45822729 CTTCTGCCCATTAGGCTCCCCTCCCACCCACGGGGCA------GAGTCAGCCTTGCTCAGACCCACGTGT------CCCTCGTGGC----CAGCGACGCCAAAGGGCTGCG-CCCCCGCATCCCGGGGCCCTGGCACTGCAGGGGGCACCGAGCCCGCCAGCGGAGGGCCAG-CCCTCGCGCACTGCACACCCTCTCCCGGCATGGGAAAGCCTTATATAACACAGTTCTCCGAACACACCCTAAGCCCGGAGACTTTCCAACTCTCCAGCAGGACCTCGCCCCTCCGCCGTCGCCCCAAGAGCGCGCCGCGGGAGCGGAGGGGTCCGGGGAGGGGAGCTGAGCCCTCCTCCCCCTACGCCCGCCGGACTCCGGCCCCCGCCTCCCACACAAGCCCCGTCGCCCCCCTCCCCTTTACCCCTCGCC---ACTCCT--CCCCGAGTTCTGGTTTGAATTAGTCACCGGCTCCAACCACCACATTCCTCAGGCTGCTGGCGCCGAGCCAGGCTCTGGGGCGGGGGCCATCCCGCCCGGACGGGTTTGGGAGTGGAGT----TGGGGAGAGAGCGCCGCCTCT-GAAGGGGAAGGGGCGGTCCCGAGGGCCGCGCCG-CTGCACAGCCCCACTCCCCGCCCACCCCCAGTGCAAGAATCTCCCCAATTATGTCCCCCACCCCC------ACTCCCACCCGTCCCGCCGCGGGGCGCGCTGCAAACTTCCAGGCTCCGCCGCCCTAGAGGAAGAAGGGATTTTTTCTGGAGCTGGGAACACAGAGGGGCAAGACTAGGGCGGGGCAGCCGAAGGGAGGCTG----AGGGGCCGCCGGGAGCCAGAAAGGGAGAGGCTGGTGGTGCAGAACTGGGTGGGGCCCGGAGGACTCGGGACGCGAAGT----------------------------------------------------CAGGGGCG a score=30636 s mm7.chr19_random 23676 973 + 2598976 GCCCCAACTCCGGAGAAAGAGCTTTACTCCCGAAG-CGTGACGCGTCGCCTGCCC-CGGCGGCCGCAAGCGGCCAGGTTTGCTCCCAACAGTCGGAACCCTCGTAGTGACACTACCGCAAATGCACCTTGTCCGAGTCC----------CTCTCTCCCCTGGTCGCCCGAACCCTGGCCCCACACCTTACCGCCCAGCGCTCCGCTTCCCTACCTGCGGGCTCAGCCCCAGGACGCAGCCATAGCCGGCGAAGGGCCCGAGGTCGCAGTGCTG--ACTGCTGGCGACGGCGAGCCCCAGTCGGGGCGGGTCTGGCAGGGCGGACAGTGCAGTCCCCGCGGCAGAGCTGCTCCAAGTGGCCGGGCCCCCGTGCGCGGAGGCGGCTCTTGTAACT----------CGGGCGGGTCTGCCCGGAGCTGTGGGGAGAgggcggggccgggcggggcccgAATAGGGCAAGGACCCGAGAGCACGACTAACACTGAAGCCACCCTGGAATGGGCCGGTGAAGGGAGA---AGGTTGAGGGGGCTCAGGGACGAG--------GAGGCGTCGCCTTTTCCCCTCCCCTATCCCATCTATTGCTC-------CTGTCCCGGCTCTGGATCTTCCCACCCCATTTTAAACAGTGTGTGTGTGTTCACCGGCAAGAAATTCCTGGAAGCACGCAGGGGCACAGATTCACAGTCGGAATCCAGAGTCAACCTAGTCTGCAG--AAGAGCCAAGAAGCTCAG-----------------ATGATTCAACCTCGACCTCCAGCCTCCACACAGACCTTTGAGCTTTCTCTCAA----GCTCAGATACAT--TAATCCCAGGCCCCAGCCTCCTCTCCCAGTTCCCAGGCTTCTTGCAGCCTCGCCCCGTTCCTCG--------------------CCTTCAGGCTCTCTCCTCTTCTACAAAACACACTGACTCTAAGACTTAGATCCGACCCCTAGGAAT-GGAGTCACCTATGCACCA--CACCACGGTGCTGTTCT--TCATTGCAGCGACAC--CAGTCAGGCCTGCAGCTGTTG s bosTau2.chr29 32012264 1010 + 45822729 GCCCCAACTCCAGAGGCAGAGCTC--CTTTTGAGGACACCACGGTTGGCCTCCCCGTGGCGGCCCGGGACTGCCCACCTTGCTCCAAGT----TGAGCCTTCACAGTGACACCCATCCAAA-GAGCCTCGCCCAAGTCCTGCCACCCACCTCCCCTCCCGCGTTCCCGGCGTCGCGTTCCCCGATCGCGCCAAGGTGCGCCGGAGGCCCCTACCTGCGCGCTCAGCCCCAGGGCACAGCCATAGCCGGCGCGGAGCCCGAGGTCGCGGTGCTGCGGCTGTTGCAGGCGGCGAGCCCCGGTCGGGGCGGGTCCGGCAGGGCGGGCGGTGCAGTCCCCGCGGCGGAGCTGCTCCGAGTGGCCGGGCCCCTGCGCGCGGAGGCGGCTCTTGTAACTCCGGCTCCAGCGGGCGGGTCTGCCCCGAGCTGTGGGGAGAgggcggggccgggcggggccggagctgggctgggacgggcgagccgggccgACCCTGCTGGGACCCGAGAGCGGGCTGCTGGGAGGGCAccggggccgcggggacccgggggcgcggcACATCCGAGGTGCTGCCTTCCCCAGCC------CCCATCCACTGCCCACCCCGGCCCCACCGGGCCTGGATTTGCC--CCCTGACTTAGGCGG-----GTGGCTTCTTCTGCAAGAAACTCTTGGAAGC-----------------------TGGACCTGCAAATCAGCCCATTTTGCAGGAAGGACCCAAGGGGTCCGGCGCCTGCAGGGGCTTGAGTGATTCAGCCGCGACCTCCAGCCT-GAAGCGGACCTTTGAGTTTTCTCTCAACGCTGCCCACTACCCTTCTAATCCTAGGCCCCGGGTTCTTCACTTGGTT------CTTCACGCAGCCGCG-CCCACTTCTCGCCCTCCCTCTTTCTGGGCGCCCCTCAGCCCCTCCCCGCCCCCAGA------ACCGGCCTGGAGATGTTGGCCCCACCTGCTGGAGTCAGGGTCACCAGCGCCCCACGCGCCACCGTGCCTCTCTGGCCGCTGCAGCGACACGGGAGTCAGGCCCGCACCCCTTG a score=49376 s mm7.chr19_random 297869 1985 + 2598976 AGTTGTCTTTAAAGAG-ACACCTGGTTCTCTACCTGGCCACCATGTCCTTGAAGTCAGTTTGCAGGTTTTTTTTGTTTTTGTTTTCACTCAGAGTCATCAATCTCTTGACTCTCCAGTGACCTCAAGGATGTTCCGATTGACCACAGTGCAGGCCACTTTTTTGCAACACCCACATTCTGAGAAATCAGCAGGACCTGGAGCATTGCGTTGATGCAGCTATTGATCCCCTGCTCT--CTTTGCTGAACTCTTTGATGAGCCCCAGAATCTGTCAATAACACCACCACTGCTAAGCCCTT-CTTCCTG-TGAGTCCAGATTCGATGTCTTCCCTCAGGGTCACAGAGTATC-TAACTCTGCACCTAAGTAGATTTTGTTATCTGTTCTGGGCAAGTGTATCCATTAGAGAGGTTTTTCACTCCAAACCCAGAGTCTGGCAGTGATATTATAAAAGGCAATGGTTGCTTATTCTCGCAaaacaaacaaacaaacaaaccaaaaaaacaaaACCTTGAACTGTGCATTATTTATTATTTATAACCCTAAGGAAATGTTCTTTCTTCAAATGGCAGATTATTCATTCCCTCCTACTCTGTTTTGGCATTCAAATTCAATTTTCA-----AATGAAAAAACCTTAGGGTGGCTCCAATAGCCAACTGGTATTGCT-----GTGCTATGACTCAAGAGATCCCTAATAGGTCAGATCAGAGTCTTGAGTGTAGCAATGCCTGAAACCCTCCCCTCAAAAACACATCCCCTTGA-----TAAACAAAGCAACATACAAACAAACAGGTCTCCTTTAAAATGTGGTTCCTATTGAGATCCATCTTCTACATCCAATTTCTTTGTCAG------------TTCCTAGAAAGAACAGAAGGCCTAGTAA------GTCTCA---------------------GGTTCAGcccg---------------------------------------------ttatcccagagat------tatgaggctgaggatacaggagtgtctagatcaaggtctcatagctagttagtagt-gagttgggctcagtaccctgtgtctccagcctcccTACCAGCAAGCTTTCTGTGTCTGATGGCATCCTGAGGAGACAACTTTCTTTCAAACGTGTCAACCTGTATTAAATTCCATGCCTAAAAACCTTCCATGTACCTCCATCTGATTAGAGCTTCTCTAGA-GTCGCTGTAATTCTGGAGATGGCAGGCATTGGTGTAATTATATATAAAATTTCCTCTTGGGCTTAAGTCACTTGCAAGAGCCGGTGGTTATTTTAAAGCCAGTGTATAAAGTGGCATGCTGGGATAGCAGC-ATGCTGAAACTGAA---GTTAGAGTGATTGCCAGGAGCTGACTGTTTCTGTCTGTTAAAGCCACTAAACATGGTGGGGTGGCACTGGGCCCTGCTCCCACCACCCCACAGC-AGTGGAA-TAGAGATGTCTGTGT-----------AGCTCAGCTCAGCTCACAGGAAGGA-------------AAGGCATTTAACACTGC-----CCTGACTCACATGTAGA---CTCCATGTCTTC-----------TGGCTTTCTCTGAAGAAGTCATGGGGAG------------GAGCCCCACAGGGCAGCAGAGCTATGGGGAGCAAGGCCCT---CCCTGAT-------GCAGCATGGGT----GACAGGAAGTGCCTTTATATTCCCTGACACAGCACACTGCCCGTTGCATTATACAAGTACCTTTCACATTTCTCTAGTGTTCTCCTCAGTCAAATCCACA--------AAGGCTCTAAGTATTCATCACATACTTTTATTTTC------CCATTCAATTTGCTTTCTTCTAAAGCCCAGGACTGTCTCTCTGGGTTAGATTGTGTCACTATTCTGGAGACAGGTTTCGCAGGCAAGCTTACAGAA-TGCTTCCTTCTGCTCGTGGGGGAATAGGATTTTCTGCCATCGCTAAGTA----AGAGGTATGATTCTTACTGTT---TGTGCCTCA--CTTATGTGGGGAGGTAAATATTCAATCCAGAGGCACCTGGTCCTTGTCCTAGGGGTCTATCTTATCAGA-TGTAGCAGAAAAGAGCCAGGGC----TGCCATTAACAGTA--TCTCTGTGCCTCCTGAGTACCCTGTGGTGCTCATGTTC s bosTau2.scaffold789 1200 2077 + 346776 AGTAGAATTTAAAGAGGAAATTCAGCGCTCTAATTGGCTGCACTGTCCTTGAGGTCAGTCTGCA-----------TTCTTG----CACTCAGAGTCATTGATGCCTTGCATCTCCAGTGGCCTTGGGGACCATCTGATTGACCATAGTGCTGACCTTTCTTTTGTGGAAAGGTTTTTCTGAGAAATCAGCAGGACCTGGCTTGTCTTGCTAATGTGGCTATTGAT-TCCTACTCCTGCTTTTCTGAACAGCTTGATCAGCCTCAGAATCTGTCAATAACAGCACCACTCCAAAACCCTCACTTCCTGCTGGGTCTGGATCATA--------CTAAGGGTCATAGTATATCTTTATACTATACCTGAGTGGATTTTATTTTCTGTCTTGAGTAAGTGTATCCTCTAGACAGATATTCTTTCCAAGTCCCAGTGTTTGGAAGTGATATTATAAGAGGTAGCAGTTGCTTGTTCCTCTA-----------------------------AAAGCCTTTAATTGTGC-------ATTATTTATAACC------AAAATTTCCTTCCCTAAATACTAGATTATTTATTTGCCCATACTTGGTTTCTATACCCTACTGTACATTGAAGCATTAATAAACAAACTCAAGAGAAAGT-CAGCAGCCAAAGGAGATCTCTTTTGAGCAGTATGATTGGAGGGATCCCTAAAAGGTCACCTTTAAGTCTTGAGTGCAGCCATACTTGGAATTCCCCCATTGGAAAGTCATTCCTTTGATTTTTTAAAATGAAAAATGTGTA-------AGTTCTCTTTTAAATTGC-----------AAGTGCCTCTTTTACATCTACCTTCTTTTGTAGACTTGttatagatcattaaaactgaaaggaatcttagcaatcatgtgctccaacctccttatgttGTTGTTGTGgttcaatcagtaagttgtgtccaactctttgtggccccatgaactgccaCGTtccttatgttagagatgaagaatcagaagcagagaagacaggagt-tctggaacgagcattcccagctaattagtagtaaagttagaatcagtaccctgtgtcccttgcctttttgcctggaagcgtgttgtatccTATGGTATCCTGAGAAGACAAGTTTCTTTT--ATGTGTCAACCTATATTAAATTCCATTCCTAAAATAATTTCATGTAAAGCAGTTTGATTAGCATTTCTCTGGAGGTCACCATAATTCTAGAGATGGCAGGCATTGGGATAACCGTGTATAAAACTTCCTCTTGGGTTTAAGTCACTTCTGAGATGCAGTGGTTATTTTTAA--------ATAAAGTGGCATGTTTGGGTAGCAGTGATATTAGAAAGGTAAGTGCTAGAAAGATGGGCAGGCACTGA--GGGTCTATTTGTCAATTTCACTAAAAATGGTGGATGGCCACT-GGCCCGACCCCCACCCTCCACCACCAAGTGTAATTGGCGGTGTCTGTGTGTGAGGGGAGGAGCCCTGGTTAGCACAGAAAGAGGAGATAGAGCAAATGAAGGCGAGTGAAACTTTAAAAGACAGTTGTTCATGTAGGTGTCTCCATGGAATCAGCATCACCCATTGTCTACTGTGGAAAAATCCTGAAAAGTTCAAAGGAAACTGGCCCCAAAGAGGGGCAGTGATGTGTCCAGGAGGAACCTTACCCCTAATCCCTCTGGCAGTGTGGGTCAGGGACATGGAGGG--TTCATATTCCTCAGCAGAATAAGCTATTCCTTGCATTTATGAACTATCTTTAACTGTTTTCTGTAATTCACCTTGGCCAAATCCAAATGAGATTTTGAGTTCTGAGTATTAATTGTATATTTCTATTTCTGCTTAACCATTTAAATTGTTTATTTCTAAAACCCAAGACTGCTGCTCTGTGT------------CCATT---GAAACAGGTTTTGCAAGGAGACTTTTGGAAGTGATTTCTTCTACTT-CAGGGAAAGAGGAATTTCTA--GTAGTAACGTATCATACAGCCAtggttcttaaatttcagtgggcatcatcttcacttggagagct---tgctgaaaacacagg--cctgggccccatttca--gatctacCTGATGAGACTATAGCAGATGGGA-CCAAGACTGTGTGTTATTAAAAATCCTTCTTCATGCCTCTGCATGGCCCTGTGATTTTGATGTTC a score=4868 s mm7.chr19_random 300394 186 + 2598976 CAAAACAGTAGGTTATACACATGCAAAAATACTGTATCAAAATTTGATACTGA-----TGGTGGGCACTCATTACTA-TTAAGGTAGCTCCC---CGCAACCAAGCTACTACATGGCCCTCTTTCTGATCTCATC----AATGACAGTCACTAGACTCCTTCAGCTGTAAGACCTTCTTTCTCTTTTTGCTTCTTTATC s bosTau2.scaffold789 3668 194 + 346776 CATAAAAATAAATTTCATGCACATGGAATTAATGTTTTTAAATTGGTTACTAACCTTTTAGTGTTAATTTATTATTAATTAATGCAGCCCCCAGACACTACAGTGCTCCCACA-GCCCCTCTTTCTAATCTCATCTTGTGAGAAGAGTTAATACACTCCTTCAGCTATAAGCTCTTTCTACTGTTT----TCCTTTATC a score=11647 s mm7.chr19_random 301333 456 + 2598976 TCTCTCATAGTATTTCATGTGTTCT----CTAGTGAATTGCTTGAGGTTGCCATTTCTAGCATTATTTTAATTGTGTTTAGGCCATCTTATTAGAATTTATATGTCTGGGTCTCTTAAATTTTAATTCTAAATTGACCGATAATGGCAAAATGAAGCCCTAGTAATTGAATGAAAAATTGTGACTGTCTTATACCTATTTTAGGCTGACCTATGAGTGGATCCCAGATTttttattttattttattttttctagttttttttaaatttgttctgttttgcttttgttttTAACGTCAGGGAAATTTAGTAATACCCTGTCTAAAATTCTAATTCCATGGCTGTCAAGATCAGTTTT-CTGATTGGTTCTTTTGGATGACCTGCATATCTCCTGTCCTGCCGCAACAA----ATAGCCCTCTTGTCCCT---TTCAGGCACTGCAAGTCCCTGTGCTCTTTCTACTTGT s bosTau2.scaffold789 3865 427 + 346776 TCTTTTATATT-TCTCATATACACTGATTCTGAGGTATTGCTTGAGTCTGC-AGTTCTAGCATTATTCCTGTGATGTTTGAGCCAGTTTATTAGAATTTATATGTCTGGTACCTTTAGATGTTAATTCTAAATTAAGCAATAATG-CCAAGTGAGGCTCCAGTGACAGGATAGAAAATGTCGACTGTCTTTTACCAATT--AGCTTGACCTAGGAGTGTAAGTCACATTTAAAAAATCATTTTCATTTCTCT------------------------------------TTAATGTCATAAAAATTTATTAAAGCCCTCTTTAGATTTTTAAAGTAATGACCAGCAGAGTCAGTCTTGATAATTGCTTATTTTGTGTTATATTCATGTGTTCTCTCCATCAGTAACAATAAAAAAAAATACTTGACTCTGGCTCAACACATTATACTTCCCAATGTTCTTtttatttat a score=55316 s mm7.chr19_random 301789 1360 + 2598976 GCACTTTCTAAGTGGTTTCATTGGGAACCCTGTGAATTTTATAAAATAATGATATTCTTATTTTTTTTCTATTGAAACAGCAGAGAAAACGGAGAGCTAGCCTGATCAAATATTTGTCTTAATAATTATAGTTTTGATATTGAACATGACTGGAATTTCATGTGAGTCTCTGGAGACCATTGACCCCC--TCCATTTAAGACT---AATAACACTACCACCCCAGCAAAGGCTTTATGCGCTGCCATTGCCTTTCCATGTTGATAATTAAGATGGCATTTATTTGTACTAATAATTCAGTATTATATCTCACTAATAGATGCACTGAGCAAGCACTGAAGTGACAAGATAAGTTGCCCTGCTTTGTTCCATATGTCTGTGTTCTAAGTACCCCATAGTTTTAATTGGTTCCCCGCAGAATAACATTTACAAGCATATGGTTTGGAAAATGCTGACTGCTTTTGTTATCATGCGTCTTAGTGTATTTGTGGTGGCCCTGGTTCACTTAGCCTTTAGATGTGATTCAGGGGCTCTCTACTGTGCTTCATGTTGTATTTCTTCTTCACCTGCCTACTGGGTGCTAAATGCCATTTAACGTGTCCTGGACAGGAGGCCATTCATGTTTAGGCAGAGAACAAATT--CTAAGGATTTTGTCATGGGTCTGTGCAGAAAGATCACCCTCTCTGTGTCTTGTCTTTTATGTGGATT----------TCTGAGGCTGTATTCAATTATGCTTGAGAAGAGCGGGTTCGCCGATGGGAACCCA-AGGAGCCAGAAGGCAGACTAGAGCTTTGTCTGGGAGATTCACCAGTGATTCCTCAAAAAGGAATTGCAGATGTGAAATTAGACTCAAGGACTGGAGACAGGACCATCTGTA-TTCTGGATATTAAAGGGATTTTTGTCCATGAGTGTTTTCCTC-GGGAGGAGTATGACAGAGTACAGCTGAATTATTCATGTCTCTGAGATTGTGTGCAGAGGATC--TTTAAAAAAATCTTCTATTTTGGAAA--TTCAAG-ACATACCAAAATGAAATAAATCTGCACCATGAATTTTGTGGTGGACCTCTGCTTTGGCATTCTAAACCTCaggactgctataacaa--tgccaacatctgggtggttt-aacaacagaagtttacactcttgcagttctgaaggctggaagtagaagatgcagttg--cctgggccatgtgtcctctgaaggtaccgagaaagaatgactc-caggcccctcacctaacagatggtgggcccag---cattccctggcttg-agatag-cttcttcctg-----------tgtcttccttctgttagtgccactgt-tcaaatttccccctttttattagcacat-gccatcttggacta-ggctcaaccaaacgacctca s bosTau2.scaffold789 4499 1389 + 346776 GCACTTTTTAGATGGTTTTGCTTGGAATCCTGTGAGTTTCAAAGAACA---------TTATTCTTTTCCTTGTGTAACAGGTGAGACAACCGAGACCCAGCCTGACTAACAATTTGCTGTAGTGATTCAATTTTTGATGTTTAATGTAATTGTTACCACATGTGA--TTCTGGAGGCAGTAGGCTCTCCTTCCATTTAAAACTCCAAATGATGCCACAACCAAATCAGAAGCTTTATATGCTGGTGTTGCCTTTTGGTAGTCATAATTAAGATAGCATTTATTGGTGCTAATAATTCAGGATTACGTCTCCCTAATAGATGTACTGAGCAAGCACCACGGTGACAAGATAAGTTGCCCTGTTTTGTTCCATATGTCTGTGTTCTAAGTATTCCATAGTTTTAATTGGTTCCCTGCAGAATAACATTTACAAGCATATGGTATGGAAAATGCTGACTGCTTTTGTTACCATGTATTTTA--GTACTTGTGGTGGCCCTGGTTCACTGGGCCTTTAAATGTAATTATGAGGTTATTTAATTCACTTCCTGGTATATTTTTTCTTAACCTGTCCACCACGTGTTAAATGCTA-TCAATATAGTGTATATGGTAGCCTGTGCACATTTGGGCAGAAAACTAATTCACAAAAGCTTTCTCTGTGGATCTGTGCTGCAAGA-CGCCTTCTCC-CACCTCGCCTCATGTGCGGTTTATAAAGGCACTGCAAGGCTGCCTGCAATTATGCTTCAGCAGA--GGATGTGCTGTTTGGAGCCCAGAAGAGCCAGGA-GCTCTCTGGCGCCTTGTTTGGGAGATTTACCAGCAATTCGTTGAAAAGGGATTGCAGATGTGAAATTAGACTCAAGGATTGAAGAGGGGACCAGCTGTATTTTTGGATATCTGAGCTCCTTTGGTACTTGGGTGTTTTCCTTAGGGAGTGCTGTAGCAGAGTGCAGCTGAATTATTAATATTTCTGAGACTATGTACAAGCCAtcttttttttcaacctttgtattatggaaaatttcaaacatatacaaaaatggaaagcat-tgcataatgaaccct-cagtggacctaggatttagtgtgtttgtttcccaggctgccagcacagattacctacaactgagtagtttaaacaatagaaatttattgcctgacagttctggaggttggaagtttgagatctaagtgtcccagggccacgttccctctgagggcacaaaggaagggtctgtctcaggcctctcttctaacgtctcgaggactcagatctgttctttgactcatagatggccttctccctgtgtcttcatcttgtcttccttctatatgtatttctgtgcccagattccccctgtgtacaaggacacagtcatcttggattagggcccacccaaatgacctca a score=12964 s mm7.chr19_random 303159 1237 + 2598976 TGTGAATGGCGCCCCCTGGAGTTTTGTGACAGT-AGGTACCCTCTGCTTTCACTGTTGCTA--AACTAGGTCTTGTCACTTGTGTATCTTCAGTTAGTGTTAGCTGGAATTTGTCGGTCACATAGGT-----------ACCATGTTCTTCTCCCGATCACTACAAATATAAACCACCCACAAAGGGTTGCTGTtctctctctctctctctctctctctctctc--------------tctctctctctTTG---------TTTAAAGCATCAGGTCCTCTCCTTTCTACTCTGAAGAGTGaa-----ttaaaatattaataaattaGAAAGTCGTTCCTCAT-------TATGGACAAATATTTAGGAGTCAGGCTCTTTAGTTTTTGCTGGCTTCTTTGGTTGTTTAGTTTTGGGTTTGGGGCCATGTGATTTCCAGGCAAACACCCTAC-CATCGAGATATAATCTCAGCCCTCTATTTTTCTTTTGATGAAAATTTATACTCTGTGTAATCTACAGCATCTGAGTTGTCACTGGCTTCTAAAAAAC-------CAAACAGCCAAGAGAAACAACTTGCGAG---AGAATCCTGGGGCTTTGACCTGTCCCAGAGGATAAAC--TGCTTTCTCAAATCAGGTCAGGG--ACTATCATAATGTCACGGAccctcttctggcccctcctctggcccctcctccggcccctccAACTGTGCTCTCCAACTCCTGACTCTGAGGATAACTGACAAGCTTCCCCATTG-------CTGTGTCTGCCCTG---CCCAGACA-AGGATTTGGACTCTGCACTAGCTGCCAAG-GGAGGTGTCCCCTTGATGGTGATTCCCTGTGTT-GGAGACTTCAGAGCAGACATCACAACATAAAGAGACTAAGCT--------------------------------------------------------------------------------AAATGATTAGGGGATTTTGAGTCTTTAACGTAGAGTTTTATGTTTTTCATTATTGAACACAGCTACTAGACCAAA-TGAATGAAGATTTATTGTACAAGATGAGTAAAACATCTTAAAAACTGATTATCATCTATCTTGCAA-GACTTACTATGGAGAAAGTTTCGGGTAGTCTGATGTATTTTATTATGTATTG--AAGTTTTCACGACATTTAAAAAGTCTTTATCATTTAAAATATCTAAATATATCTTTTA-ATTGAAAGTC-----TAACAC----------AGTAAAAAAATAAAACTTTCTGTATTACACCTTTTCCTTTTTTCTTTTCTTATATGTGGTTGTTTTGTTTAAACAGCAAAACAGAAAAACACGTTGGGGTAGTTGAGTCTTAAAGGTG--TTCTCTCTAATTTGTTCAATTAATT s bosTau2.scaffold789 7802 1245 + 346776 TGTAAATGGTGCCCCCTGGAGT---GAGACAGTGAGGTGCTCTCTGCTGTCACTGTTGTTACTAACTGGTTGTTGCCTCTTGAGT--TTTTGTCTCTGGTTAGCTGGGGTTTGCTTACCAAGCAAGTGGAAAGAGAGGACCATCTCCCCCATCCAATGGT---------------CCCACA-----------TTCTCTCCATCTTTTCTTGCTTTCATCCCTCATAGTACTGGCACCTTCCTACCACCTCAGCCAGAAGCTTAAAAACATTTTCTCCCCTTTTTTCCACCCTGAGATTTTAAAGATTTTAAGACATGGCTGAATTAAGAAGTcatacaccacacacatgcgtgcacacaca--------------------------------------------------------------------------cacacacacacaTTACACGTTGAGG---AGTCTCG---CTCTCTTTTTTCTTTGATGAAAATTTGTATGTTATATGATCTAAGGGCTCTTAGTTGCTATAGCCTTCTGAAATACAGTCAAACAAACCAACAACAAAAA-AGCTTGGGAGGGGAGCATACAGTAGGACTGATTTGT----GAAGATAAACAATACTCTATTAAA-CAGTTGAAGGTCACTGCTAAGATGCAATGA---------------CTCCTTTGGGTCTCC-----AAACCACAGATTCACTTCTCCAGTTGTTG-TTCGGTGAGTAATTGACAAGTATTCCTAATAAGACTATTTGTTTTTACATTAGTATCTATACATAGGGCAGTGGGGTTGCAGTTGTCATAAGGCAGAAGTGTTAGCTTA----TAGTTTCAAATATTTGGAATTTTCAGAGCAGATACCACAGTATTAAGAAACTAAGATGTAATATTCAGATTGTTATTGGAATTTTTAACTTCTGCTAAAGACATTACTCAGAAAAAAATACTCTCTTAAGAAAAATAAAATGGTAAGAAAATTC-AAGTCTTTAATTAAAAGTTTTACATAATTCATCATTGAATATAGCCAGTAGCCCAAAATGAACAAAGTTATATTTTATAGGATTAGTGAAATATTTTAAAAGCTGA-TGTCATCCACTTTACAACTACTTACTATGGTGAAA---------AGTTTGGTG---GTTATTATGTATTGTTAAGGTTGCCAAATATTTTTAAA-CCTTCATTTGTCATTCTTTGGATATGTATTTTTTGTATTGAAAGTTCAGTGTGACACTTATTTAAAAATTAAATAACAAAATCTTCCTCTAATACAGAAGATTTCTTTTT-----------TATGACTAATTTATTTAA--AACAAGGCAGAAAGCTTTGTTCAAATATTTTA-TATTAAAGGTAACTTTTTCATAATGAATTTAATTGATG a score=6434 s mm7.chr19_random 305145 291 + 2598976 ATGCCCCCCCCCCTGACATAATTAGAAAGCAAAAATTAATCTTAAAAAGCCTGCCAATTGTGGAGTTCTGTTTGCAGACTCCAGACAGTCCTCTCAATAGACAACAACAG---ACAAAGGG-AAAATATTTGGATAACTGTAAAGCA-GTTATTTGCTTCTTGGAACCATGAAGTCCTGTTATCTCAAGGCGGAAGGGATATGAGACATAGAAAATTTCAGACTCT--GTGGCGAAGAGTTATTCCCATCAGAATGTGACACCCAGTTAATACTAACATATTTACACTTTTCAAATAT s bosTau2.scaffold789 9047 289 + 346776 ATGCCCCTTAAAATGTCAAAAATAAAATTCAAATGAACATATTGAAATTTTTTCATATTGAGGGGCTATGTTTGGACTCTCCAAACAATTCTCTCAATAGAAGAGAGTTGTTTACTACGGGCAAAATGTATGGGCAACTGAAACACAGGTCATTTAGTACTTAGAATCATAAAAGCATATTATCCTAGGTTTGGAAGGAGCTGATGCTTAGAAAACTGGAAACTTTTCATTGGAAAAGCTTGTTCTTCTCAGAGGGTGATACTTA---------AATTTGTTTCTGCTTTTAAAACAT a score=4959 s mm7.chr19_random 305710 160 + 2598976 TAAAATAGAATTTG----CATATTTCTATATCTGTCTTCATTTACAGCTATATCCTCCCACAATGTTCAATGTTAT-AAACATGAATTATAATAACCCTTTACTGCATATCTAACAATAGTGT--TAGGTACTGTTTAGTTTTAAA--TGTTTTTTTGTCTTGCAAAAT s bosTau2.scaffold789 9337 168 + 346776 TGAAACAGTACTTATGCACATATTTCTGTATCTATCT-CATCTGTGTCTATCTCCTATGGCAGTATTCTGTGTCACCAGACAGGTATTTTAATAAATCTTTATTAAATACCCAACTACTGTGTGCCGGCTGCAGTTTAGTTTTAAAATGAGTTTTGTATTTTGCAAAAT a score=26851 s mm7.chr19_random 305983 667 + 2598976 GTTGAGAAAGAGAGAGACTGAACACCGAGGTCACCTGAAAGGTGAGAGTCCTTCTGTCATTGAAAAAACACACAGTGTAATAAATAATGGCATCATTAAAAACTGTCATCTTTGCAAAGTACAGTAATTGCTCTGCATATCCCTTGCACATTTCCCTGTGAACCTGCTGGAGCACACCATGCTCCAAAT-CGTCTTCTCCTTCCGCCTGCTTCTAGCCCCGTGTCTGTTCATTACTGTCATGTCTGAGTGGATTTCTGATGCGCCAGGTGTGTGGTGTCACCGGCCTGATGTCTGTTCCCGATACAGACAAGCACTCTC--GAGTATTAAAGCAATAGATC-TTCTTATGACAAC-GAAAGCCGAGCGCAG-AAAGCTAAGCTTCAGGGAGAAGCCTTCTGAGCATGTCTCCACTTGTTCTTGCGGGGGACAAGACCTGACTAATTAGCTCTAGCCTTTCCAAGCCAAAGAACAGAAATAATTAAAGGAACTGCTGCAACCTGTGCCATGTAGT-----GCAGGTCACAGGAGGTGTGACACGGTTGGAGACCCTGATGTGGGAGCCAGATTACAGAAGATACTTCTAGACGCTTGATGGAAAATGCCAGAAGACATTTCTTTTTGT--AAAAGAATCCATTGAAGAGAAATGAAAATATCTATGCATCATGTGTTTCCC s bosTau2.scaffold789 9505 665 + 346776 ATTGAAAGAGTGAATGA---------GAGGTCACCGGGAAGGTGAGAGTTCTTCTTTCAATGAAAAA-CACACAGTGTAATAAATAATGGCATCATTAAAA-TTGTCATCTTTGCAAAGTACAGTCATTGCCCTGCATATCCCTTGTACATGGTCCCCCCAAGCTGCATCACCACATTTTGCTGGAAATGCAGCCTCTCCTTCTGCCTGCTCCCAGCCGCTGGTCGATTCATTACTGTCATCTCTGAGAGGCTTTCAGACATTCCAGGTGTGTGGTGTCACCTGCCCGACATCCCTTCCAAATACAGACGTTCACTCGCGTGAGTATTAAAGCAATAGATCTTTCTTATGACAACAAAAAGCTGACTGCAGCAAAGCAAAGCTTCTGGGAAAAGCCTTCCGAGTACATCTTGGCTTGTTCATG-GGGAGAGAAAACCTGACTAATTAGCTTCAGCCCTCCAATCTGAGGGAGGAGAACTAATGAACAGATCAGA-GCAGCCTGTGCCACACAGTGAGAGGCTGACTCTGGAAGAGGCAGCAGGTTAAGAGGACTTGATCTGAGCAAAGACTCACAAAAGAAGGTTCTGAGAACTTAGTGT--AGTGAATGAAGCCTTTTGTTCTTTTCCATGAGGACCAACTAAAGAAAAGTTAAAATACTTATGAATCACAATTTTTCC a score=5718 s mm7.chr19_random 306735 403 + 2598976 TTTCCTTTCTATTC-------------AACCTCTTTACCTTTTATTTATAGTGTCATAATT--TTTTGTTCAAGTTCGTAAGCATAGACTAGAAGAGAGGAGTGGAAGGACACCACATGTCCAACTTCTAGCTACAAAACTTACCAAGATCTTGTGGAAATG----TCTACACTAGAAGAATGTATTTTT-------------AAAAAAGTATTTCTGATTCTT----------GCCAGACAGAAGTTATTTAAGTTTTGCTACACATTTCTTACATTTTATTAACTAAAAGAATCATTGTTTAACTAACTGTAAAGTCTCATCAGCCACACATGTAGCTCTCTAACTCCTTAGATTGTCACCACCATGTGAAAAATCTTGACCTGGGGGTATAAATCCCAGAATCTCTCGCTGAGATGAGAATAGAGATTCTTTGGGACTTGAA s bosTau2.scaffold789 12070 417 + 346776 tttcctttctcttccttctttcctGAAAACCTCTTTGCTCTCTTGTCTCAGTTTCTCATTTACTTTTAACTATGTTTTTGAACACACACCA-CAGAGAGGCC---AGAGAAAACACAGATTCATCATCCAACTTGAGAAATTATCAACATTTTGTGAAAAGGGCATTCTGAACTTGAACACTTAATCTTCTGCTTTGGGGAAAGCAGATGTATGTCTTATCCTATTTGTGAGTAGACAGTAGGAAGTAATTTGAACTTTATGACACATTTTCCACATTTTCTCAACCAAAAGGA--ATAGGACA--TAACTGCAAAATAGAAGTG--CACACGTGAAGTTTTGAAATTCCTTG-----------------GAAAAATAGTG-CCTTGGGGCAACAACCTCACTAGCTCTGATTGTTAATACGATAAATACCCCTTTTGTCTTGAA a score=7954 s mm7.chr19_random 307531 525 + 2598976 TCCTTTCTTCATTCCCTTATGTCATGGCATGTCCTCAGTCA-----GGTCAAATCCAAAGCTACACAGACAGAGGTAACTGGACATCCTTTAG--TCATTCTTTCAATACATACATGTAT----AAGTTTTATTCATGTAGTAC------AAAATA----ACATTATAAAGTGCACTTTTAAACTCTTCTAGAGTCAGAATGTTTAACAGGCCACGCTAACCATAAGTTTGTGTTATTTCTTCTTTAATACAGTGGTACAATGACAACCTTGCACGGGAAAACATTGCAGGGGTCCAACTTGGTGAATCCTAAAGCCTCGTCTAACTCTGAACGTTAATAGATCTAAGTGTTG-----------AGATTAGCAATTGTTCCCAAAGTTGTGCTCCATTTGAAGCAGGTCAGTGGTGGTCCCTTTTCTAAACCAATTTCTGATACATTCTGCAATTTACAGGGGCCACATGGCTTTAAGGAGCTT-ATTATGGCTTCTTTTTGAGGCAGTAGTTCCCAGGACTGCTTCTCATGAGAAGTAGTCTTGA-TTTCTTGCAAAC s bosTau2.scaffold789 13570 515 + 346776 TCTCCTCTTTATTTC-TCAGTTCTTAGTTTGTCCTCTATAAAAAATGGTCTATTTTTTTCTTATACAAAAACA--TTAGTAGAAGTCTTTTGAGTTCATTCTCTCAAGACGTATATTTATTTCTGAATTCTGTTCATGTATTACTAGACTAGGATATGACACATCATAAAATGTAGTTTTAA-------TAAAA-CAGAAAACTTCAAAGGATGAGATAAATAGGAGTTTATGTGGTTTGTTTTTT----------------------CTCACTTTGGAAACTATTGATGGGTTTCAACTGGGTGAACCC-ACATCCTTTTCTAACTATAGTCTTGAGTAAATCTAACTTTAGTAAATCTAACAACACCAGCAGTTCCCTTTGAAACTGTATTTAATCTAGGATAACTCGA--GCAGTCCTTTTCAAAACCCAAATGCAGATTTGTTCTTCTGTTGACAAAAGCCAGATGGTCCTTGGGAGCTTAATCTTGGGTCCTCTTTAAGGCCATGGCTTCCAAACATG--TCACAT------Tattctagactttcctgcagac a score=4925 s mm7.chr19_random 308084 245 + 2598976 ATTGGTCTTGGTCTTTCTTG-ATTCCTATGACTACTAATGAGGTTGGCCACCTACTCAGGTGTGTGATTCTTTCTTAGCTAAGCAGCCATTTCC----TTTACCTATTATTTCCTTGCATTGCTCAACTTCTTAAGAATCTCAGCATGTAGAAGGTCTTTGGATGGTCAAAATATTGACCCATCAATGGGAAGGCTATGCAGGCTCTGTGCAAAGAATCCCTCCCACTCGGCTGCTTACTGTCGTCTTTC s bosTau2.scaffold789 14726 242 + 346776 attattgttgatctaatttgcatttccatgactactaatgagactgaatttcctttcatttattcatttttttcttctattaattgcctattcTCACTTCTACTGATAATTTCGTTG-GTTG-TCTTTTTCTCAA-----TCAACGTGTAGAAACTTTTTTTGTGATAGAAATATTGCCCTTTTAATAGCAAGATGGTACAAATATTATGCAAATATTATCTCCTACTC-TTTATTTTTTATCATTTTCC a score=7627 s mm7.chr19_random 308330 333 + 2598976 TCTTTTGGTACTGTGAT----------CTATCAAAATTTCCCTGTGTCCAGAAACATTTAATAGTGA----TATGTTCACCGTCTTAGACTGCATATTAAGTTGTTTTACCATTGTGATCT-----CAAGCACAACAGAAGACTCAGTGCATTTCATTCAAGAGCTGGAAGACCTACGCCCTTCTCCAGTCAAGTCTGGAGCATGTTGCTGAAGCACTATCTAGGAG-CAGAGCAAATGAACTGAGGA----------AAATGGTGCGCAGAGCAAGACTGGTTG----TTAAAGCTTAAAG---TAATGCTCTATTAAATAATGCATGTGTACTGTATACCTAATGCAATTTACTGAAAAGGTTCTTCC s bosTau2.scaffold789 15214 355 + 346776 tctctcagTTCTGTCATTCTTTTAGGCCTATCAAAATTTCACTGCTTTTAAAGATACCTAATAGTGAATGATACATTCAACACCTTAGATTTAAATTTAAATTGCATCATCATTTTTATATGGGTCTAACTATAAGAGAAG--TAAATGGATTTCAGTCAA-AGCAAGAAA------------CTAAGGCAGAGTCTGGCCTGTATTATTGCAACGATTTTCAGAAAACATAGTAGGTAGATTGAGAATAAGATGGTAAGATAGTACAAAGTGTATCATTCATTGCTCTTTAGTGCTTGAAAAGATAATGTCATATTAAATAATGTATGCTTATTGCATACTTAATGCAACTTATTGAACAAGCTGTTCC a score=6523 s mm7.chr19_random 308713 386 + 2598976 AGTGCAGTGTGTTAATGTTTTAATAGTTTATTCATCAATGAATGTAAGATAAATTACATAAAA--GTATGAAGGCAATGCTTCATGAAGGTAATGTTTCAG------------AGGTTTCATAACAAGAAAAGGATCAAGAACTTGTCTTCCACAGTCATTAAAAAAAGTAATCAA-ATAACATGGTGGTATTATTTTACCTAAC---ATGATAATACTTGAATATGTGTTTGAAGATCTAA----CAGTTCAGATTTCTGTGTgtgggaatgaaaatctgtgcaacctttctggtgagtgctaaaaca-----------------ctgcgttctttgacctagaaatttaaagtctggaagtttaccctaaagaaataattagtaattgacacaaaaaCATTCTCTCCCAAATCTCTATTGTAG s bosTau2.scaffold789 15625 381 + 346776 AATACAGTATTTTA---------------ATTCAGCAGTGAGGATAGAATAAACATCCTAAAATGATATGCAGTGAAAAATTCACAAAAA-AATATGTCCATATGAAGACACCAGTGTCCATAGGAAAAAAATGACCTAAAG---------------CACTTATAAGTATAATAAATATACTATTAAAGTACTATTTTGCCTAGCAATAAGATAATGCTTAAACA--GAGCCGAAGATTTGAAAATCAGTT---ATTTCTGTAGGTGAAAATGTAAATTT---CTAGTTTTCTAGTAGGCATTAAAATATTTACATTATACATTACCTACGTT-----ACCCAGAAATATAAAATTCAGAAGTATATCTTGAAGAAATAACTAGAGATGGGCATAAGAATACTATGTTCCTAATATTCCTTGCAG a score=2332 s mm7.chr19_random 310743 68 + 2598976 AATGATACTTGCCGACACTTGATCTGAGAATATTATGAGGTCAAGACTGGCAGTAAACAGGTTGAAAA s bosTau2.scaffold789 16941 68 + 346776 AACCATATATGAAGTCATTTCTTTTGAGAACATTGTATTTGCAAGATGGGTAGCAAACAGGTTGAGGA a score=9753 s mm7.chr19_random 312005 293 + 2598976 GCGATGAGGGCAGAGGCGACAAACAACATAAATTTATCTAAATTGACT--GTTTCGGTCTTGTCAG-----------GCAATTGTATTACCTCATGAACCTTTTTAGTCTTAACCACCAAAAGCCCTTTGCCCTTTTCTAGTTAG----------------------GTCACCAATTACATGAAGGCATTTATGAGAAAAATGAATATAATATGCATGCGCCCTGCTTTTGTAGATTCTGGTAAATGTGTTTGCTTTTACCCATTACCTGAGTTGTACCTCCAAGAAGAAACTATAATTATGATCTCTTAGTCACTCATTACTTTTTA s bosTau2.scaffold789 17357 320 + 346776 GCGGTGAGCAGGGAGGTTATAGAC----TATGCTTCTCTGACTTGATTAAGTTTCAGTTTTGTCAGTACTGACTGAGACAATTCAATTATGTCA-AAATCATTTGAGT-TTCGTCATTGAAAGCTTTTTGCCTTTTCCTAATTTGCTGGTTTATATTCATCTAGTACGTCACCAATTAAATTTGGACATCTATGAGAAAATCAAATATAAACAGTCTATGTCCTGAATTTGTAGATTCTGGTAAATGTTTTTGTTTTTATGCATAACCTGAGGTACAGCTCTCGGAAGAAAT--CAGTTACAGCCTCCCAGTCACTTATTATTATTTA a score=14223 s mm7.chr19_random 313847 831 + 2598976 atttaaattaattattattgaaattaataGTGATAGAGTATTAAAGAAAGAGA-CAGAGAAGG--GGCTATG--------ATGGTACA--------GCAAGGGCTTTTAGATGAAAAGGTTTCTTATAGGATTTTGGATTGATAAAGCTACAGGTAGGAACAGGTTTATTTCTGAGAGGGAGAAATT--TGGAACAAGCCAACTG-----------------TGTACTATTGG-AAGGCTCTGGAAGCCCTCT-TCTGCTCAGTTCCTCTGCTTTCCATGGGGGGAGCGGTGTTTAAAAGTG---------GACCATCCACTATTTTCTCTAATAG-CAGTGGAATATAAATGTGCAGGTACTTAGTTGGCTTTTAAAGAGAGGTAGGAAGTTAACTTCAATAAGAAGTCTCATTTTATCCATACATAAAATTGTACTTTGAAATCGAAAGCCCATTCAAATCATGCTCTGGAGTATTAGTGTGTTCAGTGT---TTTCTTTATGCCTTAATTATGG---GAATCTATCCAAATCTGCTTGGAAGT----------GCATTAGTCGGCAAAGCCAGCAGTACATGTTTTATCTGATTTTTCACTCTTCTGCCTGTGTTAGGCTCAGGCATTA-----------------ACAGTAAGTCTTTGGCT--TGGGATTTCCTAATGCTTGCTATGCCTGTGTTACCATTAAGGAAAGAGCATTTACTTGCCAAAGCTGGTCATTGCT-GCTA-----TTATAAAATCACATTTGGGAAATGCATGTACTTCTGAGTTGCT--------GaataggttgggcccttcccaacctcaggacctttgcatatgattttccTGTGACGTTTCACTTCCTGGGTTCAAATCGTTACTTAAACATCAGATTTTTCCAAGAGACTCA--CCTAAGCATCCTA s bosTau2.scaffold789 19309 892 + 346776 ATTTCAATTCATTATTTTTGAAAACATTTGCCTGGGATTTTTAAGAAAAGAGAGTAGAGTAGGATGGGTATGGAGAAACCATAGTAAAACTGTGTTGCAAGGGCTTGTTGACTAA--GGTTAGTTGTGGGGCTGTGGAT--GTAAAGTACCAGGT-GGAACAGCTCTGTTTCTCAGAGGGTGGAGTTATTAAAAAAAAAAAAGCGAAAACAATGGAGGGGCCTGAGCTAATGACAGGGCTCTGGAAGCCCTCTCTCTGATCAATGC---TGTTTT----GATCAGAGTG-TGTTTGAAAGTGCTTTTGCCTGACAAGT-ACAATTTGCTTTCATGGGTGGTTGAATCTTAATGCTTAGATATTTCGGTG-CTTTTAAAAAGAGGTAAGAA----ACTTCATGAAGAAATCTCATTATAGTGATGTATAGGATTACACTTTGAAA------GCATATGAAGATTGTGATCTGGAATACTGGCATATTCAATATATTTTCTTTTATATGTTGATTATGAAGAGATTCTGTCCA--TCTATTCAGAAGTTCAAGGTATAGTATAAGTTGAGTA------CAGTATCTATTTCAACCCATTATGAAGATTCCATTTTGTTTTGGGCTTGCTCAGCACTGGATGTAGATAGGAGATGATAAATCTCTGTCTCCTGAGATTCCTTAATGCTTGGTGTGCTTATATCAAGATCAGGGGATGGCTGTTTTCCTGCCAAATCTACTCTCTCCTAGCTGGGAGTTTATAAAGTCACATTTTGAAAATGTATATGCTAGGCAATAACTATTTGTTGGAACATTCTGGGCATTGTCTTACTTT-GTACCTTGGCCTGAGA--TAACTG-GAGGTCCCTTTTCTTCACTTTAGATCTTTATT--AATATCA-CCTTCTCAATGAACCTCATCCCAGGGCACCCTA a score=10333 s mm7.chr19_random 315223 424 + 2598976 AATGCCATCAGAAGAGACCATGAGCATGAAATAATGTGATATGTGGGAAGAAGAGGAGCCCAAAGAGACACCAGAGAGCATGCAAAGGGGCATGC-------------AAGATTGTGGGGGAGCCCCCAGGGTTTCACATTG--ATCTGCCATGGCTCTGACCAACAAGAGAATATGTTCTTTGT-CTCTTTAAATGAAGAC---TAAATAGACTCTATTTGCTGTAGAAAGTTCCTGGCTTGTGAGAGCTGGTCTAGTACACTTTGGAGTAGCAACCCTCATTTATTTAGCTTTCTT----TTCTAATGTACTAACTGGGGTTATATCTGGAGATGCATCGACACACAGATGTTA----------CCAGGTCTTCTTTTGTGTAAGTTGAAAGTTGCACATGAAGCTATATTG-GGAATGACAAAGCCTAGAAAAGAAAGCAGGCTAGTCACTTGTG s bosTau2.scaffold789 21519 446 + 346776 AATGATGCTGGAAGAAGTCATGACTTTGAAGGAACTTGATACATGGGAAGAAGGGGATTCAGGAAACAAATAAGAAAACATGAAGACAGGGATGTGGGCACCAAAAAAAAAAAAAAAAAACAACTCTCGAAGGTTTGTGTTGGGATCTTCTACAGC-CTGACCTGCAAGTTGATACATGCTTTTTTCTCTTTAAATGAAGAAGGATGAATAAATCCTAATCT---TAGAAGATTCCCCAGTTGTGAGAATTGGCCCATTATG-TTTGGGCTAACAAT-----TTTATTTAGCTCCTTTCTCTTTCTAAT-TAATAATTGGT-TTGGGCTTGGAAATGCATTGACTCCCAAGTCTTCTTATTTTCCCCCATGTCTTCTTTGGTGCAAGCTGAAAGTTGAATGCAGAGCTGTGCTGAGGAATTACCAAACCTAGACAAGGAGGCAGATAGATCAGCTTTG a score=17664 s mm7.chr19_random 315674 702 + 2598976 TGTATTTAGCCTTCTCTCTTCTCTCTTGGT-----GCCCTGTGCACTTGAGTGGACAGTG---TCGTTAGGACATTGTGAAATGGTTAGCG--GGGTTGGGGAATCAGCTCTCATGGTGTCAGGCTTTAGAGTCTGGAATCATGGTTGGCCCCATCACATGCTCCTCTGATCTGTAAAAAGCTTTGCTGATCTTTCTACTGCCTGTCTCACAAGATAC-----GGGAGACGTGAGGTAATGTCTCCTTAGACCCTTGAGCTTCTCGGAAGAGCAGCATTTACAGGAATGTAATTTCTTAATACATTTGCGTGTGCTGTAATGGGCTGGAATTCTATTTACCTAAATTTATTTGGGTGCTTCTGGAATATTTTGTTGTCTC-----------------GACTTTG------ATATCTAGACCTGAACTAA---CCCCTCAGGGCACATTCAGTTCTGTGAGCCAGCTGTACTTTTATGAGGTT-AGAAAAGGAAGCCAGGAAAGAAGGGCGTGTGAGCCAGGCTGGGTGCTGATGGGGGAGGGGC-----TTGTAGTCATCCCCGGAGTCCATATCACAGTTCAAGCATTTTAAGCATGCTGTTTTACTAAAAATCAACAT---AAAAGAAATCGAAAC-TATGAGTCTGTTTTAATGACGCAACATCACTTATTGGGGATGGCTTATGTAAAATAT---CTCTGCCGCTTTTTTCTGTG---ACAGATTCT---ACCCAACCTCCTTCGTGATTTTCTTCAT s bosTau2.scaffold789 22014 735 + 346776 CGTATTTAACATTCTCTTTGCCCCCTCGATCCCCATCCCTGCTCATTTT-GTAGATACTGAAGTCATTATGGCATTATTGTGTGATTAGTGCAGGGCAGAAGAGACGGAGCTCTTTGTACCGGGTCATGGGCTCTGGGAACAATCCTAGTCCTCTAACAGCCTCTACTGACCTATAAAAAGTGTTGTGAATCTTCTTACTGTCTGCCTTCCAAGAGATATGGGAGGAGAAATGACGTAATGTCTACTTAGACCTTCGAGCTTCTCGGAAGAACAG--TCTACAGTAATATGATTTCTTAATGCATTTATTTGTGTGGTAATGGAGTATAATTGCATTTATCCCAATTTCTTTCTATACCTCT---AAATCTGACAGTCTCGCACGGGGAAGCAGTCTGGCTTTGGGAGTAAGAACTGGGTCTAGACTAGAATCCTCCAAAAGTACA--------AGTGTACTGGCTAGAAAGTTATGAGGTTGAGGGAAGGAGGGTGGGAGAGGAAGGAGTGGGAGCTA---CAGGTGGTGATGCGGGGGAGGCAGTGGTTATAATTATCTTCAGAGTGTTTATAACATTTTAA-------AATCCTATTATTTTACTAAAGATCAACATGTCAATATATTTTAAAATATACGTATTTGTTTTAATT-TACAATATTGCATACT--GGACAACTTATATGCAATATTGATCCTGCCATCATTCTCTGTGCTCATAGGCTCTTTGATTGAGCCTCCTCCAAGATTTACCTTAT a score=10545 s mm7.chr19_random 317124 521 + 2598976 AATGTTTTAAAAGAATGTCAGCCTTCTATAAAAGAATTTAAG-------TAACTATTGAGTAAACCTGAAAAACAAACACAGAAAACCAAAAAAGCATGTGTTCCCTTCTAGAGAGGTGACTGTACAGAC-ATGGAAAAGCAACGGATGCAATCTGGAGCCCTAGACTAATAATGCAACTCACAAGCCTCTTTCTGAATGAGAAAACACACATCAAAAAACAAACATACAAAAAAAACCCCGTTTCATTCACTAAATAATAGAACATTAT--AGAAAGAATAGCTTCCA-AACCCAAGATGGAATATGAGAAAA-TAAAGCCTTTCAAGATGGTGTGTTTGCTTGACTACACAGAGTGGGAAGGATATAAGAAAAAAAAAATCCCGTTGTTTCTTAAAGTAGGAAACATGTCTTCTATGGGTAGATGATCCTTGATCTCTGTGTAACTGATCTTCACATCAAAATGATCCCTTACTATAAAAACACTTCCTCAGAGATATAGCTCAAAGGAAGTTAATTTGTAGGTAGCCTTG s bosTau2.scaffold789 23210 474 + 346776 AGTGTTTTATAAGGAGGTCAGCCTTATATAAAGAATTTTAAGAGTGAAGCAACTGTTGAGTTAACCAGGAA----------GAAAAC--AGTATGTATGTCTTCTCTTTCAGAGAGGTGACAATATACACTCTTTAATAGCAACTGAT-----TTGTATTTTTGGAGCAATAATACTGATCATATTACTTTCTATGGAGGGAAGAAAA------GAATTACAACCAT---------------TTTTATTTGTTAAATTATAGAATATAATGCAGAGAGAGTGTATCCTGTCACTCAAAATGTGGCATGAAAAAAATAAATTTCTACCAAATAGTGT-----------TGCACACC-----AGGGACATATGAAAAAAG---TCATTTTTTCTCTCAAAGTGAGAAGAACATCTTGTGTAAAGAAATGATATAAAATA-CTATGGAACTGTTCTTTAGACAAAAATAATCTTTTACTA-AAAAGTGTTGACTTGGAGATATAGTTCATGTCAAGTTACTTTGTGGATGATCTTA a score=11626 s mm7.chr19_random 317772 322 + 2598976 ATTTTCC--TCTTGAAGATTTAATGG--TTTGAATAAGCAT--------GCTAAACATGGCAATTAGT----TTTTATGTAATTTTGTTACACATTTATTATTTTCTGTCATTGTGTGTGAGAATAGACAAG-----CATACTTTTAAAAAAATCATTGAAAAATTTCTACTTTATATTGGTTGGAATCAAGTAAAGTTGTGAT-TTTTCTCTTTATTGGTTGCAGGATCGAAGTAAACAATTGGAACAGGTCCACGCAGTTATTGGACCTAAGTCATGTGACCTGGATTCTCTCATTTCTGCCTTCACATATGCATACTTTCTGGACAAGGTGAGGGG---GAAGG s bosTau2.scaffold789 24118 332 + 346776 ATTTTCTGTTCTTGACAACTAACTAAAATTTGAATGAGCATTTCTGAATGTTAAACATG-----TTGTACCATTTTAGGCCCTTATATAAAACAGTTATGAGTTTTTGCAATTGTGTCCGAATATAGCTAAAGCATACATACTTTAAAAAG-----TTGAAAAATATCCACTT-ATGTTAATCTGTT----GTTAAATTGTGATGTTTTATTTGAATTTGTTTCAGAATCGAAGCAAACGTTTGGAGAAGGTCCATGTGGTTATTGGACACAAATCCTGTGATTTGGATTCTCTCATTTCTGCCTTCACATATGCTTACTTTCTAGACAAGGTGAGTGGAAAGAAGG a score=30145 s mm7.chr19_random 318094 964 + 2598976 GACTATATCCTTAGTACTTGAATTGTG---TATCTTTTAAGAATAAATATTTTATGGAAAAAT---GAAGCCACTAACTTAGTTTTCCTTGTTCTGGTATATTGCTGTAGAGAATA---TAAAATATCTAGTTAG-CAACAAGCATTTATTGAATAGCACCTGCATATTAAACATTGCTCTAGTTATGTCTTACT-AGTTTCCACTCAAA----------------ACTG-----CTTCAAACAACATATTAAAAAACGGTTATAGTAGTTGACTGCTTTTACAAGAATATAAAGAAGCAACAAAAAGCAAGACTTAGGGGCTCTGTCTTTCCCTTATCATA--TACTGTGTGACCTTGCCTTTGGGAGTAGAAAAACATG--CAGAACAACTCATATGAACAATACATGAAACACAGA--ACCCTGGCTGAAGATT-CAGAGACAGGGGCATGGCAGATCCAGTCTAGGTCTGTAAGCCTTTAGTTGTTGCCTTTTAGACC----------------------------CGGTGATGATGTCCTTTAAGGGAGATTCTTTCTACTCTGTGAAGCACAGACT------TACCCATGGAACTGGAAAAGCCTTTTT----AACAACTCGTGTTCAAACTCCTCATCTATAAACTCCATCAGCCCACAGTAATGGA---CTTTATTGCTTGAAAAACTTTCAAATGTGCGTTCTGAGTATTTGGGTACTATTTC-------GTGGAATTTTTAATTTTCCAGAGTCTGGTTTATTTTATTTCAATTTTGTTTGGATC-TGGATCCCCTGATACTGTGCATAGCTGATCTGGAGTGACTTAAATTCACATGAAAACCCAGTCTTCCAGAATGAGCTGCGGGTGGCAAGTACTGCTTTAGG---GCAGCTGACAAAATGATGGCTAAAGTATTCTGATCTCTACATGTGGGCTCTATATCAAATTTGTCTTACAAGTTGTTGAATTTTGCAAAGAATAGTAATTGGTATGAGTCAAG--ATGCATTTGAGTCAAGATGTGCATATTAA-GCAATCCTTATTA s bosTau2.scaffold789 24766 1029 + 346776 GATTATGCTTTTTATATTTGAATTATGATGTAACTTTTATAAACAGATGTTTTCCAGAAAAACAAGGAAGCTACTAACTTAATTTTTCATGTTCTGGTTTATTGTTGCAAAGAATAATGTATTATAATTAATGAAtcaacaaatatttattggtcacttactacatgttaggcattgttctaATTATTTCTTACTGAGTCTCTGCATAAATATTTATTTCAATAGGATTGatttttttcaaataaaaaatttaaaaatg-ttataattGTTGATTACTTTTGTGGAAATTCAGAGAACTGACAAAA-GTAAGTGTCAGAATTTCTTGTTTGCCTTTGTCTTTCTTGTTGGATAATCTTGCCTTTGGGAGTAGAAAAATATGTGCAAAATAATC--TGTGAAGATTACATGAAGTATAGAGCACACTGGCTGAAATTTTCAGTAATAGAGGTGT------TACCTTCCACATCTGTA----TTCTGTTTTTGCCTCTTAGCCTGACTTTGTACAGCAAGGTCATTCTCAGTTAACAATAATCTCCCTTGAGTCAGAGTCTTCGTACTCTGTGAAGC-CATACTATAACATGCCAGTGGAGGTGGAAAAGACCTTTCTTTAAGTAAATTGTTTAAAAATATCCATTCCATAAATTC-ATCAACCCATATTGAAGCATCACTTTAAAGCCTAAAAAA---------GTATATTATGAGAGTCTTGGTGCTATGTCTAATTTGACACAATTTTTAGTTTTCTGGAGTGCAATTTGTTTTACTCCAATTTTGTTTGGATCCTTGA--CTCTGATGGTGTGCATAGCTGATCTACAATGATTTACATTCCCATGAAA-CCTAGCCTTCCAGAATGAGCCGTAGGTGGCAAGAATGACTTTAGGGCAGCAGCTGACGAAGTGCCAGGTAAAATATTCCGATGTCGACATAT-GACTTTCTATCATATTTATCTTAAAATTTGCTAAACTTTACAAGGGAGATTAATTGGTATGAAGAGAGAAATGTGCCTGTGTCAAGACATGCATTTAAATACTAATCTTATTA a score=3270 s mm7.chr19_random 319353 79 + 2598976 CCTCCTTCCT--TTTGGAGACTTTTAACTAAGCATAGAAACAAATATGGCATTTTATTAAAGAGTAACATATGGGGGATTT s bosTau2.scaffold789 26605 79 + 346776 CCTCTTTCCTCCTTCCAAGACTCACGACTAAGCATGGGGACAAATATGGAA--TTACTGAAGGGTCACATACTGGGAGCTT a score=13793 s mm7.chr19_random 319942 921 + 2598976 TCTGCTCTGTGACTTCGCATGCTGGTGAGTAGAACAGAGGCCAAACTCCATAGACACAGAAAACAGAGACTCAGAAAGGAGAATGGCTTTTTCCAGTTCACTGAGCAGGGGGTACGGCTGCCATCTTGTTTTCTGATCCCACCTCCAAAATAAGTCCTGCTTGGACAG-CTCAGAATGTACA--TCCTGACCCCTGTATTCATTCTACTTCTTTGCCATTGCAGGAGTTAGATACAACTGT--CAATTAATTAGGAAGAGTAACGTGCGATACCTAAATCACTAATGATTATTGTGTGACTAAGATTCAGTATTAGCATGACAGTGGAAAGGAAACTCACTTTGGTAGAGATGATTTTGTGTTTTTGGGTACAGCGGCAGT------TTTACTTGTttaattcagtgaatatttatt------------------------------------aaatgtctgctgctgcctggttgttttatgtcttggaaggcagcagaacaaaa------acaatcctgtccttttaatgcgagaggggagacagacACTGG-GATATTGAG-CTGTGTACTAAGCAC-ATGCTTGTGGTAGAGCT-GTGGTGACGGAAGAAGAAAGGTTATTTC-CTTATCCAGAAACAAAGCCTTACCAAGCC--------TTTCAGTGGCA-----GCCTCATTGCT-----GTTCCCttaattttt-aaaatacttt-------ataatttatataGAGAAACAGATTTGTT---GTGAATATGAATTTTCTT---------CCTTCTCCTCTTCATCTGGTCATCACAAATGTTTTATATAAGAGGCCCATAAAAGTAGTTAAatatctatatatatatgtatgtatatatatatatattatatatgttatacacatatataatatatataatatTTATTAGCATATCATATCTATTAGTATGTGTGCTAAATCTGGTTGCTAATTGAATAACCAGTTAAATACATGCTGTTTTGCATGTTTAAAAGGTC s bosTau2.scaffold789 26833 897 + 346776 tctgtttaattacttttcactctggtaggtaa-------gccccattctatggagg-ggaaaactgaggctcagagaggaaaatggctttctcaaagtca---gacagaagagtcgg-----gttagtttttctgacccccaCTCCAGAATAGGTCCTGCCAGAATAGGCTCAGACTGCATAGCTCTTGACTTAAGT-TTCAGTAT---------------CAGGAGTGCAGTATAACTCTAGCAATTAATAAGGAAAAACATCTTGTTGTGCATAAACTGGTAATGATTATTACATGGTTGTGATTCTGTATTAGCCTGATAGGTAGGATAAAACCCATCTTGTTGGAA---------TGTCTTTGTATACCATAGTAGTAGGTGATTCATTTATTTCACTCAACAaatatgtattgtgccaatatgtatttgtgccaataCAGATTGGCACAAATctgttttg-tgccagaccattttatgcacttagaaacat--gaacaaaactgacaaaaatcc----ctgcTA----GGAAGGGGAGATGGATGATAAAGATGTTAAGACTGTGTAATAAACACTGTGCTTGTGAAAGAGCTAGTGATGATGTGAGAACAAAGGCCATTTAGTTTAGGCAAAAATCCAGTCTTTCCAAACCCCACATTCTCTCAGTGATATTTAGGGTTTATTGCTATAGAGTTATAGTAATTTTTTAAAGCACCTTCATTTTCAAAATTCTCATGGAAAAATAAGTTTATTATTGTGAATCTGAAATTCTCTAACGTCTACCCATCTCCAGTTTCCCCCATCATTACAGTTTTTTTTTA-AAGAGGTTTGTTAACATA--------------------------------------------ATATTTTTT---------TAAGATATAAAACATTAATagaaatcaca-atctggtagtctgtgagccaaatct----------cgagttttcactaacctacacagtatttt---taattaaaaggtt a score=668 s mm7.chr19_random 321282 131 + 2598976 cctgtctgctttcccaggaggacccccatggtgggaggagagagctgacttacgccgtttactctctgacgtccgcatgtgtgc------tgtggcatgcacaggctcgcacatacgctcacgcaCAGGCACACACA s bosTau2.scaffold789 28045 119 + 346776 ccagtattcttgcctagaa--atttccatgg----acaagagagcc------------tggcgggctatcgtccacagggtcacaaagagtcggacatgacagaGCGCACACACGCACCCACACACAGTCTTCCCCT a score=30900 s mm7.chr19_random 321512 1194 + 2598976 AAAGCACTCTG-TAACTGGCCTCA-GGGAGATTTGTTTCAGATGTCAAACGGTTTCTTTGTGAACAAAAGGCTTACACTC---TAGCAATTAGCTTCTAGCTGGAGGAAA-------------------ACTGCTGTTTGCAGCGGTTGAGGTAACTTCTTCTTTCTGTAGGTCAGTCCTCCCGGGGTCCTCTGCTTGCCAGTGCTGAATATCCCAAGAACTGAATTCAACTACTTCACAGAGACAAGGTTTATTTTAGAAGAGCTGAACATCCCTGAATCATTCCACATATTCCGAGATGAGATTAACCTGCATCAGCTGAACGATGAAGGGAAACTGTCGATAACGCTCGTGGGCAGCCACGTCCTGGGGAGGTAAGACTCACCGTGAGGTTCTGGGCATTTGTCCTGAGGGAAGCTTTCCTGGTCAGTTGATAGCATGTTC---CTTATTAATGTTTAAAAAGAGTCATAAAAAG--GACTTTATTAAAAATATAGG------TTTTTTTCTTTAATGAGAATATTTGGGCTACACCAGTTCTCCTTGTTTACTTTGAGATTTCAAAT-TGATGTTCATAAGTGGGATGCTCTTGTAAAACTCACCAAATT--------------------AATACTCTCTTATCGTGTCCCAATAATCATACTTATTGATGTTGAAAAT--------AAGATAGGGAAATTTAAACCAGATAAAACAGAAAGATT---ATAAAGAAATCTCATTAGAGAAAAGGAGGAGACTGGGAAATGGGCCACGAAAATCACTTCATTGTAGTTTTCT-----------ATTTTCTATGGTAACAAAAAAGCAGGCTG-----TTGATATTCCATGCAGCTCAATTGTTGTACGTCATAGAAGGGAAAAGTGGAGCCCAGTGTCACAGACGGCTTTGCCCAGGCACCACATGTAGTCAGT-GGAGAGTTTAAATCAGAGCTC--TTCTGCCTCTTTTAG---GCTCTGAGGGAACTATGAGCTGGGGCAAGGATCTGAG------ATAAAGGGAGAGGAATGAGATGAATTCCCTGTC-----------TACAGATGATTACAGACAGACC----TCAGGGATACACTCTGTACTGCCATCCAGTGAAGGGATACCAGCTAAACA---------CTTGGAGTGTTCATTCTTTGCAG-TTTACCAGTTTGCCTATTGTTG--AAGACCTTGACCAATTAACCTTGACCTTAGAATACTTACAATAAGACtttta--tatttaataatttttaaGTGTAACCAGTTTTTAGGAAGCATATTTACAAAAGAAT s bosTau2.scaffold789 28357 1289 + 346776 AAAATGCTCTGCTCATTGGGTTCATGAAAAACTGGTTATGAATGTAAAGTGGTTTAGC-GAGACCAAAGGACCTTCATTCCCTTCCCAGTTACCCTCTGGCTTGAGAAAATGTAGTTGTGTTTTATCCTCCTGCTGCTGTCAGTGATTCAGCCAACTTTTTTCTT-GGTAGGTCAGCCCACCAGGGGTTCTCTGTTTGCCCGTGCTGAACATACCAAGAACTGAATTCAATTACTTCACTGAAACAAGGTTTATTTTAGAAGAGCTAAATATCTCTGAATCATCCCACATATTCCGAGATGAAATTAATCTGCATCAGCTAAATAATGAAGGGAAGTTATCTCTAACACTTGTTGGCAGCAACGTACTGGCAAGGTAAGGCTCTGGAAGGAGGTTTGATATTTTAT----AAAAGATTTTTCTGTGCCAGGTATTACCTTGTTCAGGTTTTTTGTGATTTGGGAAGATGTATTAAAGGCAGATGACATTTCAAAGAAAGGGAATGTGTTTTTTCTCTTAT-AGCAAAATTGCGCTTTGCCAAGCCTCTGTTTTCACTTTGCCGTTTCAGATATGACATCTTTGGGTGGAAAATACTTATAAAATAGACCAAAATTTTAATTTTAAATCATTTCAAACACTTTCTTATAGCAACGCAACAGTCCTTTATACTGATGCTGAAAATGTATAATGAAGAT--TGAAGTTAACACTAAATAAAACTGAAAATTCTTAAGAAAGAAATCTTGGTAGTGAAATGGAAAATTAT-GTACATGGGCTAGGAAAGCCATTCAATCATTGGCTCCTTTagtcatagcatttactat--------aaaagcaggatggattctataaagttcatgtaatttgaactccttattttatggacaagaaatgtgaaaccca--ttcgcaaatgacttgcccaaagtaccacatgcagttaatagaagaatttggatgagaacacagatctgtttccttcagtaagtactTA-GGAGTTGCTAACTGGTGCATGGATCTACAGATATTATACATAAAGAGGAATAAGACAAATTTCCTGCCTTCACAGTTCTTACAACCCATCACAAAGAGTCCCATTTCAATGA---GCTCTCTGTTGCTAGTGAGTGAAGAGTCCCCAGTTAAACATCTCAGCCCTCTGAGGTGATAGTTTTTTGCAACTTTGCCCATTTGCTAATCATTGATATGGCATTCACCCGTGGACATTGACCTTAGTATACATGAAATAAAATGTACAAGTATCTGAT--TTTTTA--TCTAACT-TTCTTAAGGAAGCATATTTAGGTATGAAT a score=5549 s mm7.chr19_random 323314 302 + 2598976 ATCATGCACTTGGCTAAAGTCATGC-CTAATGTTTTCAAGACAGCTCATGCAACTGACACAAGGAAAGATGA------------CGTGATGGCACAAAAG-----------------------------TTGGGGAAGAATTTTGTCACCACTCAAAATGAAAACTGCTAACTTGACCTTGAGACTGAGTTTATAAA------CTCTGGGG------ATGTAGTCGAATACTCCAGAAAAGTAGAGAGC-----TTACTTTCTTTATTATAATTCATTTATATTTGAATAGTCAGAAAGAAAAATGTAGCTTTTTT---TCTGTACCTTTCTTCTTTTGAGAAAATCCACTTCTATTACATATA s bosTau2.scaffold789 29843 352 + 346776 ATCATGTGTTTGACTAAATTTATGTGTTAACTTTTTCAAACTAACTA-------TAACACAAGGAGATACGGAAAGAAGCAATGCAAGATGCCGGAGAAGAGAACTATGAAATTTGTGTCAGTTAAGATTTTAGGAAGAGTTTTGTTACTGATTAAAATGGAAACATTTATTCTGGTTTTGAGACTGAAGTTGTGAAGCCTTGCTTTGGGATTGTTTATGAAATAGAATGTTTTTCAAAAATAAACTGCAATTTTCATTTCCTTCATTGCCATTTTTTGAGTTTTGG-----CAGACAGAATCAGGTCAGTTTTATCAACCTCTGTCCTCCTGCCTTTGATAAAAGCCAACTATATCTCATATA a score=27899 s mm7.chr19_random 324549 736 + 2598976 GTCATGAGAATTTATGTTTTGGGCCGTTTAGCGGAAATCATCAG------------GACTGAATCACGCCCCGGAGTGGGAAAACAAGCCATAG--CTCTTCTTCCTTTCCGTTTATTTTCCAGTGAGGACAGAACTTTGGAATCGGCAGTTGTCAGAGTCATTAACCCCGGAGAGCAGAGTGATGGTGAGCTGGGGTTCCCGGAGACTTCCTCCTCTCTGGTGCTGAAGGAGCTCCTGCGTGAGGCTCCAGAACTCATCACCCAGCAGCTGGCACATCTCCTCAGAGGTGAG-GACGGCGCTGCCAGAGTAAAGACCGGAAG-CTTAATGGGCTGGTTCAGGGTCTGCTCATGCAGAAAGAGTGCGATCCATTCTTGAGTTAACAATCCCTTTAAAGACCCCGGGAAGCTTCATCAGAGAGGCAGGGAGTAAAGAGTTTGTTAAAGAGTAGCATTATATTGAATATTAAAAATGTGCATTTCGAAGCAGGCAC-AGGGGCCTGCACTGTTTCACTAGACAAGAATGTTAAATGGGCCTGCTGCACCCTGGTTAGAGAGCGAGAGCCAGTTCCTCTGGCTGTTAATAGTTTCCGAAGGAGATTCTCTTCTGTGACAGTGCCGGTGCGGATCAGAATTCCCTGTTCCCGTGGCCTTGGAGCATCCCCCCAGTGCTT-TGCATGCTTTGCGCATATAATCCTGCCTGCAAGGCAAAATACGCACCTTTTGTTTCGATGGTGTGATGCAGGGTCCTT s bosTau2.scaffold789 30941 680 + 346776 GTCATGTGAACTCATTTTT--GTTTATTAAGAGGAAGTCATTTGTGTGGAAACAGAGATTAAATCATTCCAGAAAGTAAGAAAATATGCCCTCTTTCTCCTCCTCTCCTCCATTTGCTTTCCAGTGAGGACAAAACTTTAGAATCAGCAGTTGTCAAGGTCATTAATCCGGTGGAGCAGGGCGACGCCGGCTTAGAGTTCCGAGAGTCTTCGTCGTCTCTGGTGGTGAAAGAGATCCTCCAGGAGGCTCCCGAGCTCATCACCGAGCAGCTGGCTCATCTGCTCAGAGGTGAGAGATGACTCTTTCC-ATTAAATACTGGAAGGCTTAATGGAGTGTCTCTAGACTCACTCATGCATAAAGAGTGTGATCCATTCTTGGGTTAACAGTCCCTTTCAAGACCACGGGAAGCTTCAGCAGAAAGGCAGGGAGTAAAGAGTTTGTTAAAGAGTAGCATTATATTGAATATTAAAAATGTACATTTAGAAATAGGCATGAAGGATCTTTGCTGTTTCACTAGACAGGAATATTAAATGTTTCCACTCCAC------------------------------------------------------------------AACAGCATGGATATGGGCTGGAATTCCACATTCCT---TCATTGAAATGT-CTCCTGGTACTGATCCATGC-TCGTTTATATAATACTACCTGGATGGCAAAGTCACCTACCCTCCTTTTGATGATACTGTGCAGGACTTTT a score=8775 s mm7.chr19_random 325716 379 + 2598976 TCTCCATTGCTATAGCCTACTGCTTCCAAGGAATGGTATTCACATTAGAAAGTGTCCATCCACTTCGGTGCCACAAAATGAGCACAG-----CCATGTGGTCATTTTGGCATATGGGATGTGCAAAATATTTTTGGTTGTGAATAAATCTTTCTT---TTCTTTCCACAATTCACTTTAGACCTAATAGGCACAAATTATCCTCA-AAATGTTTAATATAG---------AACAGCCAGGAGACAGACTGATGGAACAGAAAACAGGA----AAGGCTGAGGACAGACTGGCTCAACCCTTCCAAGGACTTTCCTTC----TCTGCCTTGCTCTCT----------CATAATTTGGAGAGGGAAAG-TTCAAAAGTTACACAGTTCCTCTGAAAGCTTTAGACCCAGTGGCCCCAG s bosTau2.scaffold789 31742 398 + 346776 TCTTCCTCAGTGGGGTCTATTACTTCTAAACAGTGGTTTATAAGCTGGAAATTGTCCATTGACTTTGGTGCCACAAAATTACCACAAAAATTCCATATTGTC------TCATGTAGGACA--------GTTTGGGGTTTTATATAAAGCTGTTTTTCCTCCTTTCAACAATCCATCTTGAACATGATAGAC-TAAGTTTTTCTCAGGAGTATTTGACACAGGGAGTGAAAAACAGTGATTA-ACAGGCTGAAACAACTAAAAAAAGAAAGAGAAGTCCAAGAATGTGGTGA--CAACTCCTTTAAGGCTTTTCCCCCACTTTTTCCTTTGCTTCCTCTGCCTCTACCAGAATTTGGAGGGAAAAGGATCCAGGACTTCTATAGTTCCTATAAATGTCTTAGAACCAATGGCCCCAG a score=5939 s mm7.chr19_random 327090 321 + 2598976 TGCAAAATATGTTTATAAAAACATAAATATGCAGCTTAGTGAATCGTCAGGAAGGAAACACCTTTGATAATTTACCCATCTAAAGAGGTAGACTGTGAAGACACTGCATCCTTCTCATGCC---------CACAGCCCACTCC-----TACCTGGAGGCAGGCAGCATTCTGAT-GCCATAGCACAAACCCTT-TGCTTTGCGTCATACTTTAGCCAGCCTTGGGTTCCTTCCCCAGGACACTACACATGAGTTATGTGTGGTTATGTGCTTTACACCAATGGACACATATGGTCTCTACAACACAGGGAATTCCAGCAGGAATCACATTCCTGTCT s bosTau2.scaffold789 37903 315 + 346776 tataaaacataaatataaaaatataaatataCAGCTCAGTGAAATATCAGAAAAGGGACATCTTT------TTAACAAT-TAATCAGGTAAAACGTGGA-ACAAGATaacctccttgtgcctctccccatcacagctctctccctctctaagtaaagataaccaatattttgatctttacagcacataccttcctgcttttctttaaatttta-ccacccctatgtg--ttccccataaccctagagattggtttttgtctctttggtgtattatataaatggtatcataTAGTGT-----ACACTTGTCATTTTT------ATCATATCCCTGCTT a score=7878 s mm7.chr19_random 327779 452 + 2598976 CTTTCCTTTTCTTCCACCAGTAT-------------------------------------------------CTACCTCTGTTTCAACTCATCTATCTCTGCTTATGCC-----TTTTTCTCAACACAA-AAACAAACATTCAGGTTCAGTCAT----------TTGATTGTCTTGGTCCTAAAACTTACTACTATAATTATCTATCAAACTGTTTGCAATATGCTATGCAATTTCCTTCAAATATTGAAGAAGAACCTGATTGCTACGG-TGTTGCTAAGTGGTCGTTTGCATACC-------------TATGATGCCGCCATTGGTTGCAAGATCTCCTTGTGTTTCTCTGATAGTTTATCTTGACACTGTGTCCTTTTGGCCCTG--AGGACAATTAGTGGTATTTGCTAACAAGTAACTCAGCGA-AGCAACAGTGT-TTCAAGGTTGGTGGAATAATTAGCCATCTTGAGACAATTTGAATTT-----AATTTCTCTTCTTTTAAAATAGCTA-------CCACTGTTTACTAACTGAGCAA s bosTau2.scaffold789 38662 542 + 346776 CTTTTCTGCTCCTCAATCAGCATGTGGGGATTTGTTCTAATCAGCTTGACCTTTAGTCTAGTAAAGACTAGACTGTTCCTGTTTCAAGCC-TCTTTTTCTATACAGGCCGGTGTTTTTCCTAAATATAGGAAATTAATACTTTAAATTAGTCATATTGGAATCTTTTGTAGTCTTAGTCTTATA-CTCACTGCTCTAGCTATATGTCAGAATGTTTGTATGATGGGATAATATTATATTCAAATAT-GGGGTAGAACCTGATTAATATGGATGCTGTTAAAGGATCATTTGTATACCAATTAAAAGTAGGTGTCAAGCTGCCAGTGA-AGAAATAACCTGCTGTGTTTATCTAATCATCTCCCCTGTCACTCTATCCTCTGGACCTTGGCAGGACAGTTATGGATAAATGCCAACAGGTGACACAGCCATGGCAAATGTGTGTTCAGGCTCTTTAGGGCATTTGACAAAGTTGACACAATTTGCATTTTCTTGAATTAATACT-TCTTACAATAGTTAAATCTTGCTGCTGTCTTTTAGTAGGACAT a score=10235 s mm7.chr19_random 328231 568 + 2598976 ATTTGGACAACACTAC-AGTAGACACGTTAGTTCATCCTTGGAATAAGTCTGTCAGTTTGGTGGTCCCTGTTGCCAGCATCCTTGTTTCCCAT----------GGCTTTTTTTGCA-----------------------------------------------GTTTCTTTG--------TACAGCAGCACAGATCTCCTGAGTCAGGTCTTTCACGCTGATGAAGCTGTGTTTCCCAGAGGAGCCCACATTCAAGGTGGAGT-------------------------------------------------------TTCATTTA-------------------------------------------------------------------------------ATAAAGGTGCTACTGGTGAGCCACAGAAGGAAAAGAAGCTGCTGTGCCTTT-------------------------------------------GAAGCATCAGCCTGAGTTCTGCAGAGAGAGAGACACCAACCAAGGCTGCTGGCTTTCTTTCC---TCCAGCCATGCAGATCTCAGCGCTGTACCTCTGCCTGTCTTCAGAGTGCCAGCACTTAGTTTCTTTGTTCACAGGCTTCCTCCCTGTCCATC---------TTTGTATAAGCTTCTTTCTCGGGTACTTGGTCTTCAGCTCTGTGGAGAGTTTTCATTTCCCTTCTGAGGTGTGCTG---CAATAGGAACCTGC-TTTTCTCCCTGCCTGAACCCTCTGTGGTTACAGGAAGAGAAGAAAATGCCATGCAGGTCGGTCCTTAA s bosTau2.chr2 51285651 807 + 86543008 ATTACAATAATAATCCTGGTAGATACCTTAGTTCATCCTTCTAATAAGCCTGTTGATCTGGTCTTCCCTGTTGCCAGCATCTCCACCTTCTACAAAATGGGTGGTCTTTTTCTTCATTCCACCTCGTGGAGAAGACAATTTAAAGGGCCACAGGAAGTTGTTTGCTTCTTTGAAACGTTTTCCAACGGTATAGATCTCATGAATCAGATCCTCCATGCAGATGATTCCATATTTCCCAAGAGATCGAGCAATCAATGTGTTGTCTGTCAGGGCAATTCGCTTTTTGTTGATTTTGCCGTAACCACGCTTGTAAATCAATTCATTTACAGACTTCAGATTGGGTACCCCCATGCAATGTATGGCTCCACAATTCTCAACATGTTAATTGATGCCTTGTTGAGCTTCACAAAGGTGCCGTTGAAGATCTGCCGGAGGCGAAGGAGCTGCAGCACCTTTCGAACCTTTGGGCTCACACCATTGATACCTCTGATCCTGATGACAAACGCCAATTTGGGTTCCGCGGGTACATA----------AAAGTTACCGGCTTTTCGTGCCATCTTAGCCATTCGAATTTCAGTTCTGTACATCTGCCTGTATTCCTTGTGGTAATGCTTAGCTTTTTCATAGATAAGCTTCCTCCTTGCCTTTCGAAGCATCTTTTGGGCAAACTTCTTTCTCAGTCGCTTGATCTTAAGCTCTGC-GAAATTCTTCCGCTTTTTCTTAAGGGTTTCTGGCACAGCAGGAACCTTCTTTTTCTTCTCTTCTGCACCCTCCATGGTTCCAGCCGGGAAAGA---------GCGGATTATTTCTTAA a score=6306 s mm7.chr19_random 328835 293 + 2598976 ATTTAAAAGTTAGTAATTTCAAGGCACAAATTGATGCCGTCTACTTCATCCAGAAAGGCATATATT----TATAAAGTGTCACTTTTCAATTATTTGTGTAAGAAATTACATGTTCAGGAAGACCCAGCTGTCATGGCTGGTAAGATCAC---TGACCTTGGTACTTGGACCCTGATATCTATCTTCTGGCTT-TTCCTGTCCTACCTGTCTTTGTCTTTATTGTGGTGGTCTTTcctccctccctccctccctccctccctccctccactccctccctccctttcttcctttctctctcc s bosTau2.scaffold789 39204 288 + 346776 ATCTCAAACTTAGAAATT-CAGGATGCAGCTCATGAGCATCAGTTTCATCTGAAAAGGCATAGACTGACTTATGGAG-ATTGCTTTCTAATTACTTGTATAAGAAATTATCTG----AAAAGAGAATGTGCTCAT-TCAGATGAGATCATAAATGACCTTGATTTTTGGAA------ATCTGTCCTTTCACTTCTTCATCCCCTCCCCATCAATGTTTTTGCTGTTGTGGttcttgttctttgttttatttcttttctcctgacttttcatctcctcttcctcttcttattttcttcctcc a score=17145 s mm7.chr19_random 329324 1601 + 2598976 ACTTTGTTCTGTTAGACAATTG--TTGCCTGCTGTGCAGGCATTGTCATTTAAATACAATCCCAG---------GACATTTGGATTCCTTGGTGCTCAG-----------------------------AGTTGCC------------CTAGTTAAAGTAACATAAATT--CAAGGGGAATAATTTTCAATATTGTTATAAAATAGCACCAGAAATTATTCAAAGGCAAC---ATGATCTTGAAGGTTTTCTGCATGTTTTCTTTACAT-------ATGTGCCAGCTAAGTTAAAAACACGTATCCTCAAACTGTTCCTTTACATTTTCCCCCCTGGTTTTGTATGTGATGCTTGAATAGTAATCTAACACAGGGCAGGCAGGAAGCTGTCCTTAGGAAGTTCGTCATCTGTA-CATAGTCACAGTTTGAAGTCT--TATGTGGAAGACTGAGGAGGCAGACCAATGATATTTTAAAGACGGAGTGGCATAGTGAAAGAAGTTTCATACTT-------CATTTCTAACTGGCTTTCGGGCTGC--TACCAAAACAGGGCTCCTTTGTCCAGTTCTGCAGTCACTGAATCGGAGAGATTTTAAGGGAGAAAGTGCTTTGCAAGAGAAG--GACTGGTCCCATGTGAGCCTCTTAGCCACTATAAGATGAGTGACTGAGAACATTACAATTTTCAGTGCACAGAGAGAACCACAGAGTGGATGAAAGGTAATTTGCATGCATAAGcctgagttctgacccatgagatcttccaccaacaagctgtgtgaacttaggcaggacctttcacttttaaa---ggaaatccccttatctgtacattaaaaagagtttggcttgaCATCGAGTTATAAATATATGCAGAA-TAAAAGCAAAACGGAGATGGTTGAGCG---TAAGGCTGGGGTGGCCCTCCCTAAGCTTGGGTCCCTGTT---AGCCCTGAAATG--CCTGAGATCCTCTGAGCAGCCAATGGACATGCATATGACTAGTCTGAAAGTCATATACCCTACAGC-AGCATCTTATATTCTTgatggctcagcgggttagggcactgtccctgcaagccctgttagtgacctgaggttgacccatataaaggtggaaggagagaaccgaatccacaaagttgtcttctgacctctgcatgcCTCTCCCAAGTGAGGAAGAATTTAGAAAAGAATTGAAATTGATGAGGTCTAAAGCCCTTTGGTAACATATTATAT-GTAGAAACATTGGGTAATATGGTCAAGTTGAAAGAGGAGACTAAAATAACTCTTAAGCATTAAATACCCAGCGATATTAATTTGATATAAAAGAATATATTTCTTTTTTCTTCTTGTGTCTTA--------------CTGTCTCTGT-----TTAAGtataatatatgtatatacatatgtataaagataaaagtatagatacatttataAGtatctacctatcaatctatcatctatctat-catctatcAAATGATCTTAGTAATTGAGTGTCATCTGTCTCAAAAC--------TGATTTTAATTTCAAACAAATTTAATCTGGTTATCCATATGCACTGCTTTTCAAT-TATAACTTCTAGTAGACTTCATGAGATATTCAGATAAAGACTAATGAGATCTCTCCCATCAACACAAATTTATATAAAGTCTTAACAGTTTTGACATATAGTTTGTCTTACATATGCATATG s bosTau2.chr7 21476919 1450 - 69141744 ACCTTACTCTTTTGGACCATATACTTGCCTGCTCACCAGGCATCATCATTTAAATGTAATTCCAGCATTGAATAAATATCTGAATGTATCTGTATTTAGCATTTTGGTACAATGGTTGATATTTTGAAGATTGCCGGAATTTTGGGTTTTGATGAAATAACACATAGTTGCAATGGGAGTAAGTTCTGATGTACTTAAAAAACCCAACCACAGATTATTTGATAATAAAGAAATGATTTTGA-GGTTTCCCACATGTTTCTTTTGCATGGAAAAAAAGTGTTAGCTGTACTAATATCTCATACTATTTAA---TTCTTAAATGATTTTTTGGCTAGTTTTATATGTACTGTATAAAATGT---TTCTCTCACGAATAATATGAAGCTATTCTCAATAGATCAGCCATCTTTTTCATATTTGCACTATGGATTTTGTTACTCTAAAGATTAGGGAGGC-GAGCGATGAT-TTTCAAGGA-----------------AGATTTTTCAGACTAGGATAGACATTTTCGACTGGCTTCCAAGTGGCATTTCTTAAACAGGACTTCTTTTTTAAAGTAT--AGTCAT---------GAGGTTT---GGGGGAAGGTGCTGTGCAAGAAAATTTGGGTGGTTCTTTGTGGGTCTGTTA-CCACTATGAAGCAATTAGCTGAAGGCAT-GTGCTCCTCCTTGTACAGACATAACCATTTTGTGGACAGAAGGTAATCCATgttgggatatttgagttctaatc--tgagatcttccactaacaaaccatgtgatcctaggcaagatgcttaacttttctgtgtggctgtttcttcatgcgtaaattgaagagggtttgatttgaCAGAAAATTGAAAATATCTAGAGAAAGAAAGGCAAAGCTGCTGTACTTGAGGAAATTGAGCCTAGGGTAGCATCACT--GGCTTGAGTCTCCCTTCTCAGCCACGCAGTGGTCCTGAGACCCCTGGAGCATCT--TGGA---------ACCCAGTGTGGAAGTCACCT--TCTACTGCTGGGATTTTACATTCCTTTTGTCTAAAAGAGAT--------------------CATGTTAA----CTAGAGTTGAAACTGATAAAAGT-----------------------------CTTTTTGACTTCT----------TCTATGTG-----------------------------------------TCCTTTTGCTGATATTACATGTTGTAGAAAACTTGGAATATATGGGAAAGTTTAAAAAGGAAACCAAAATAATTCATTTGTGCCAC-TACCCACAGATAGGCACTCG--------GAATGCATTTCCTTTTTTTCTTTTCTTTTTAATTTTCTTTCTTGTCTGTCTCTCTGTTTCTTAAGTAGAATAAA-----GTACatatata---aaataaaatatttaGTACGTGTATG-----------------TTATAGAATATATATACTTTTGAAAAAGAATTCTAATGATTA----TCATGTGTCATAAAGTGGGGAGCATGATG--AACTGCAAACAAATAAAACCCGACCCTctgtata---tgctttgaaccctgtaacttcta---------------------------------------------------------ttcatatgatgtcatgagaatttt---------tctgtgtcatctaggcatatt a score=27559 s mm7.chr19_random 331088 932 + 2598976 tggaaaatattttactgttgatttattattccacttagccattcc--cattattgtatatttagattatttctagttttttttatgacttaaacatcactatgataaacatctcagaatataaatcttcagctgtggctctgattacagtgttagcataa-ttcctacgtgca-gaatgctggagtcaaaagCTTGACTTCAGAAGTGTCCAGTGCCGCCATTTTCTTTTTGTG------GGGACCACTTGTTT--ATAAAAATACTCTCCAGAAAATA------GAAATCCGATGATTTGCTCAGACCATTAAGTGCAATAGCATGCTTAAGAATAG-GGCCGGGAAGATGTTCTTACGGATTAGAGAATAACATATGTCTTCCATGTCGTGATC-------------CCTTTGTTCTGTATTATGTGA------TGTTTTACGTTTTG------GTG-ACTAGTTAAGTCAGTGCTGATATTTGAGGCATAACTGGGGCCTATCTGATTGCTAAGGTGTTGGTTTGTTCTTTGCTTCTCTGCAATGATACC-ACCATC----TAAACAAACAGGACTTGCACATTTTCAACCCCTCTCGTTTATGGACTTCCAGTAttgttttgttttgttttgttttgttttgttttactttTTAATCAAAA-------CCGTGAGTTTGGAGGGTGAGCATAAATGTGTATTTAAGGTGTGGATGCTTCTTTCAGCATCCTACCTGCTTCTCGGCCAGCAGACCCCTCAGCTGAGCAGAGTTGCTCTAGTTGCTTGGTCATTCCTGTAAGGATATATTTGAAACCGGCTTCCTTGACTGTCTTCTAACCTAGAGGCAAGCACATTCCTCACTTTCCCCCAACCAGAGCGAACCAAACTTTCATGTG--CAGAGTGTGTTTTCAGTGGATTAGACCCAAAGCTGTGTTGTTCTAGA-GTCTTAGAACTGCTGATGTGGTACACAATCAGCTTTGTAGCA s bosTau2.chr7 21478369 896 - 69141744 tggaaaatattacagttgtgatttactatttca-ttaaccatcccatcattattggatatttaggttatttccagtttttcatg-gccataaatgtcaccgtgatgaatacctttga--------------tcgccactctgatttcagtcttagaataggttcccagacaaaagaatttctgggtcaaaACTTTAGCTTCTTATGTGTCTGACAATACTATCTTATTTTAGTTTTCATTGGTCCTCCTTGTTTTAGTAGAAATAATCCCTTATTATTACATGTGAAAATCTAATGAATGG---------TTATTTGAAATAGTATACTGAGAAGTAGTGAACATGAAGCAGATTTTA--GATTACAGAATAAAATATGTCTCCCGTGTCATCATTAAATGGATTGTTGTCCTCATTGTACATTGTAGGAGAGACTTGCTTTCCTGTTTGCAAAAAGTGGACCTGTAAAATCAG-------------------------ATCTATCTGATTGCTAAGGTTTT---TTCCCCTTAACATCTT----ATGATACTTACCATTGGTTTAAACAAACAAAACTTATGTTGTTTCCAATTCCTTCATTTCTAAACTCCTA-------------------------------------TTTTGAAAAAAAAACTGGAACTGTGCATTTTAGAGGGGAGCATAAATGCATATTTAAGGTATGAATGCTTCTTTCAGAAATTGATCTGCCTCTTGGCTGGCAAACCTCTCAGGTGCACATAAGGGCCCTGGCTATTTGGTCATTTGTGGAGGAATATATTTTAAAAATACTTTCTTGACCTTCTTCTAAGTTGGAGACAAGCACATTCCTCACTTTTTCCCAACCAAAGCGAACAAAATTTTCATGTGCACAGGGTGTGTTTTCAGTGGCTTAAACCCAAAGCTATGTTGTTCTAGAGGTCTTAGGACTGCTTATGTAGTGCACAATAAGCTTTGTAGCA a score=7001 s mm7.chr19_random 382023 180 + 2598976 TCTGTAGTCAATCCCAAGTTACTCTAAACGACGCTGCGTGCTGCTCACAGGCAGAGCG-----TGGCTGGT-CATGTTCACAGCTGATGCATCTCCAAGAAATTCTTCATGAAGGCCGCCAGCTTCTCAACGTCTTCGGTTGTGACAGCGTTATACAGAGAGGCACGAATGCCTCCCACTGACCTA s bosTau2.scaffold167 249174 183 + 679401 TTTGGAGCAATTCCCAAGTTACTTTAAACT---TTGTACGTTATTCAAGGACAGAGTGCATATTGGTTGGGATGTGTTCGTCACTGATACATCTCCAAAGAATATTTCATGGAGGCTACCAACTTCTGAACATCTTCTATCCTGCCATCATTATTCAAAGAAGCCATGATACCTCCCACAGACCCA a score=-120 s mm7.chr19_random 382203 298 + 2598976 GAACAAC-AGAGGCCCGTCCAGTGAGACCAAGAAAATGGAAGAGAGCAAATCTGGGTTAAAGCCCTCACATACGTAGGGCTCCAGGTTTGAACCTCAACAACATAGAAAAACGTGCAATGCAAAAGGCGTCTGCTTGAGCACAACACACCCTTCACTAGCTACCCCTCCGGAGAGCGGCAGCTCCCAGCCCGGGTGCTCAAGTTTGCACCCGAAAGCATCCCCAGCAGGC----AGCAT--GAAGCTTCAGTCATTAGGAAATCC--CTTGTACGGTGAAGATCATCTACCCA------CTGAATTACCTCAA s bosTau2.chr8 35973634 228 - 62115791 GAAGGACCACAGATGCGGCCATTAAGAACAGGAGCAT--------------------------------------------CCAGTTT--AACATCAAGACCAC-------------------------CCTCCTTCCAGTCACCCACTCCTTTAAGAGTCATGGCACCTGAGATCATCA--------------TGTCCAACTTCTCACCTGAAAATACCCATAGGAGGCCAAAAGCTTCAGACATCTCAGTCCTTAGGAATTCTTACCAACACAGTGAGCGTCATGCTTACATGTGACCTAGGTTAACTCAA a score=660 s mm7.chr19_random 382673 97 + 2598976 TGGGGCCATGCCACTCACT--------ACACTATGC-AACAGTTCTAACCACAT--AGAGCACTCTGCTG------CTGGTCTC------CTGGTCACAGTATCTGATGTTC--AACTGAGC s bosTau2.chr8 35974106 122 - 62115791 TGGGGCTCCATCACGCTCTCAGCTGAGAAATCATGCTAAGGGTTCTAAAAGCAATAAGAAGATTATCCCATAATAACTGGTCTTTTTCAACTAGTTACAGTAACCGCTACTTCAAGCTGGGC a score=1292 s mm7.chr19_random 382945 36 + 2598976 CCTCTGACAGGC--CTGGGGACAAGGTGTGCTTACCTG s bosTau2.chr8 35974496 38 - 62115791 TCTCTGACAAGCTTCTGGATGTGACATGTACTCACCTA a score=6964 s mm7.chr19_random 382981 132 + 2598976 TGCCCCTTCAAGGAGATCATGTTGAGTTCTACCGCCTTGTCAAGAAACCGCTT-TTCCAAAGCTTCGTCTCCTTTGGCGTTGCCAATGCGAAATGGGATGTTCATCCTGCTTCTATTCTGGCGCTCCACTGGG s bosTau2.scaffold167 249357 132 + 679401 TGCCCTTTCAAGGAAATTATAGTGAATTCAAGAGCTTTATCAAGAAATCTTTTATTCTAAAGCGGCATCTCCATTGGCATTGCCAATGCAGAGTGAAATATTCATCTTGCTTCTATTCTGG-GTTTCACTAGA a score=1534 s mm7.chr19_random 383113 77 + 2598976 CATCTGAAAAGCGTGTCTATTACT-CATCTGTGTTTCTAAGAGGTACAG-TGTCATAAGCGAATATATAGGTTCTCAAA s bosTau2.chr8 35974666 79 - 62115791 CATCTGAAAAACACATTTATTGTTGTAGATAATTTTCTGCAATGTACAACTTTAACAAGTCAACAGAAAATTTTTTAAA a score=13235 s mm7.chr19_random 385181 374 + 2598976 AAAGACTGGTGTTTCCCAGCGTGAGGCACAAGAGCAAAGAACTTTCCTCCCTCCACCCTCAGCTCACGAGCCCTGGGACC-----ATCACTCAGCAGTACACCAGCGTCCAGGG---GAAAGGAAAGTTTCA-AGAAAGAGTTTCCACTTCACAGGACATACAACG------------CATTGACTTACACATAAAATCCTTGAGAATTATCAATGATCTCATAAATCATTTGGGATTTGATGGAGCTGAGCTTCTCCATGGCTGCGGCCCCGCCGTTGTTCTTGATCCATTCCAGGACCATGCCCATGACGTAGATGCTGAAGCAGGGATAAAACATAACA-----CCAGTTAGTTCACCTCCCAAAAGCCAAAAGGACATATAAGCAAACTGGTACTG s bosTau2.scaffold7277 66 387 + 39593 AAAGCCTGGTATTCCTGGGGTGGAGATGCAGGAGGGAAAA-----------TTCACGTGCA--TCACGCTCCTGGGGACTTCAGTGTCTCACAGAAAGATGGCTGCATCCATGTTCCAAAACCAACACAGCATAGACACATTTTTCAAGTCACAAGAGGCAAAATGTGAGATAAAAACCATCCACTTACACATAGAATCCTTGTGAATTATCAATAATATCATAAATCATTTGCGATTTGATGGAGCTAAGCTTCTCCATGGCTGCTGCCCCGCCGTTGTTCTTAATCCACTCCAGGACCAAGCCCATGACATAGATGCTAAAATAGAGTAAAAAAAATACACATATCCATTTAGATCAGCTTTGCACAAATAACAAGACATCTGAGCAAACTAAAGCTG a score=6305 s mm7.chr19_random 387411 426 + 2598976 TAACCACAAACTGCTCGTCCCACCATCTACAGCCTACTCGCCTATGAACCACAGAAACATCCCAGACTACCAGAGCCAAGGAGAATCATG------------------ACGAACACTTTTAGGAAACCACAGTCACTTTTAC----CTGATGCTCTCTTATGCCTATGTTTCAAAACTGTAGATTCTCTAAGAAAATCCAAAC--CAGCAAGGGCCT--------------GTCTCAGCTAGACCTCAGGACCAACGC---------------TGGAGCCCCGCC--ATGTTCAGGCTGGCTGCCCATACCCTGTGGCTG-CCTTCTTAGGATCTGAGCAGGCGAAAGCAGCAGAAAGCCAACACATTTCTACAGACTGCCTGCAGCCAGGCCCCTCAGCCTGGGTCTCCAATGCCTCAGCAAGCAGCAGCTGGATCAGAAGGAAGCAGGCTGCTCGGAGCAAGCTCCTG----CCTGCTTCCCCA s bosTau2.scaffold7277 1665 447 + 39593 TAACCCCAAACTGCTCGATCC-------------------CCCAGGAACGACATAAACCCACCCTGCCACATGATCCCAGCAGAGTCACGTGTGAATCCTGCCTGTTCAACAGTACATTTTGGTGACTGGGCTTCCCTTCTCACAGCAGCTGTTTTCCCAGG-----GTTCCCAAGCTGCTATTTCAGTCATCAAATCATGGCTGCAGCAAAGGCTCAGACCAGGTTCATGGTCCCAGCCAGACCTCAGCACCCACACACTTCCCTCTTGGTGTGTGACTCAGCCCCATATCCAGACTCACTGCCCATGCTCC-TGGCTAATCCTAATCAGATCTGAGCAG-CACAGTCAGCAGAGAACCCTCCCGTTT-TACAAGCTGCCCAGAACTGGCGCCCTTAGCTTCCGTCTACAAAGCCTCAGTGTAAGGCAGATGGCTTGGAAGGAAGCGAGTT------------CTCCTGGAGACCAGATGCCCCA a score=3928 s mm7.chr19_random 387906 147 + 2598976 TTCATCACTAACTCAAACCTCTA-TCCTCTAAAGCCAAAACTCTTGAAACTACAGGAGCCTTATAATGC-TATGTGGATTTACAACTTGAGCCCAGTTCTTTCCACC-ACTGGTGCA-CACTTTTAATTGAC-TGATGCCTCTACTTCTAAA s bosTau2.scaffold7277 2157 152 + 39593 TGCATAGCTAACACACGCTTCCACTCCCATACCATCCGAAATCTTCAAAACACAGGGGTCCTAAGATGCTTATGCAGCCTTGCAACTTGGTCTCCATTCTCCCCACTAACCAGGGTATCACTTTTAACTGTTATATTGTCTTCACTTCTAAA a score=4292 s mm7.chr19_random 389249 267 + 2598976 CCTCACATTAGAGCTAAAAATGATCTTTGCTTA-ACATGTCAATATGCATAAGAAGT------GTTTTATGAAGTTGGAAGGTTTGTTTAGGA----TCTTCTCCGCCCTCTAACAGGGTTGAGTGTGTTCTACCAATGGGTTAAAAAGAAAGTCATCAGAGTCCTTTATTCCAGCCGAGTTC-CTGCATAAGGCTATGGCCCAGTTTATCCACAAGAGTCAAACAGTT----------------CCCAGAACCCACAATCTTTGGACTCTGACCAAAGAAAGAAAACAAAGAAC s bosTau2.scaffold7277 3018 280 + 39593 CTTCATACGATAGATAAAACGAATTTATACTTACAGGTCCCGTTAGTCATGGGAAGTAAATCTGCCTTATAGAGTTAGAAGGGAAGTTTAGGAATCTGTTTGTTTGTCCATAAACTGGGCTTAGTGT---------------TAAACAGAATGTCCACATGGTCCTTTATTCCACCCCAATTCACTGCTCAGGGTTACAGGCAATTATGTGAAGGCCAGTCGTCCAGTTCAGTTCAAACAAACTGCCCAGGGCCTCTGGTCACTTGGCTCTAATTTTATTAGAAAAAAAAAGAGC a score=21014 s mm7.chr19_random 390636 725 + 2598976 TCCTTCTGGAAAGCGACCCTGTTTGTCCGAGACACAGTCCATGGAACTTTGTCTATAGAGAGAAAGCTTGTGGGTTAACGGTCAACATCAAAATCAAGCAAAGACCAAGATTGTCACCTTTACCAAAAAAGGGCAACAAGAAAAACTGACCAAACAGCGCCTAGAGGAG---------------AGCTGGACAAAGATCGTTGAGTGTCTCTGGGGTGCTTGGGTCACCAGCTAAT-GAAGCGTGCTCTCCTT-------------------------AACTTCTG---------------CTTGGACAGAAGACTAGAGTCCCACAGTTACCTGAAGCACGGAGGTGTGTTATACAAAGAGTTGTTCCCAGCCTGCACTTTGTAGTCAAGGACTGATGGGCACTCTCTGAGCGAGAACCCCAGCAGGTCATCCCGGACAATCACCACCGTCACCCCGGCAGAGCCAACATTCTTCTGAGCACCAGCGAAAATCACACCAAACTTTTAAAAAAGAAGAAAGAAACGTTGGCTATCTTAGAAGCAGCTGTAATCATCCCTAAGCCATGCATGCCAAGGGCT---AGCTCTCCCCTAAACAACCATTTTA--ATGAAGTGACCCATTT------CTGCCTAG---GAACATGCCATACTATAGAAATCTCTACCCAAAACAGCAAGTCAGCACTTCCGAGACCCAAG------------------GCCTGGTCTTTGCCCC------GAGGTC-TCCCACACCGAGAACTGTCAAGCCC------CGAGACACACTTATGCTCTTGCAATCCTTGTTCTGCTTCCAAA s bosTau2.scaffold7277 5925 803 + 39593 TTCTTCTCTAAAGTTGCACTGCTTGTTTGAGATGCAGGC-ATGACACTTCATGTGCAGA----AAGCTTTTGGGCTAACGGTGAACCACCAAGGCTACCAAGACCAAACAGAAACACC----CCAAAAAAGAAAGGCAAGGAAAGCTGATCAGACAGTGCACAGAGGAGGATGAGGAAGAGGTGAGCTGGGCAGAGAATCCTGAAGGACATCTGGGCGATTAGGTTACCAATTCACAGAATCATGTCCAGCTTCAGAAAGTCACCTAGTATTGATGGGAAATGCTGAGACCCCCCTCCTTCCCTGGTCCCCAGGCCAGA-CCCTGGAGTTACCTGAAACAGGGAGGTGTGTTGTACAGGGAGTTATTTCCAGCCTGCACTTTGTAATCCAGGACCGAGGGGCACTCTTTGAGGGCAAACCCCAGCAGGTCATCTCGGATGATCACCACCGTGACCCCTGCAGAGCCAACATTCTTCTGGGCACCAGCAAAAATCACACCAAACTGCCAAA-------GAGAAAACGT--GCTATTTTAAACGTACTTG--GTCATCTTTCATAAATGTATGTCAAATTCCCCAATCTCTTTCTAAAACACAGTTTTTATGAGGAAGTAACTCAATTTTAATCCTGTTCAGAGCAAATTCCCTTTTCTAAAGGAATCTCTATCT-GGACAGCAAATCAATACTTGTGAGTTTAGAGCCTGCAGATTATGAATCTGCCTGGTCCTTCTCCCCAGGAAGAGGCCAGCCCAAGCCCACCACTGTGAAGACCTTGTATCTATTCCTATTCACTCTATTAC-ATCTCTTTTCTACCTCCAAA a score=17800 s mm7.chr19_random 393063 431 + 2598976 ATATATCAAAACAGC--TCAAAGAAACGTTCACTGGTTCCCC--AAACCAA---CCTTTCATTCTTTACCTTGGAAACATCCACCGGCCTGGATAAGAAGTTTGAGGACATGTCACAGACCAGCACCGCTCCCTTGACGTCAGGTACGAAGTCAAACTCCACCCCGTGCACAGTCTCGTTTGCACAGAAGTATACATAGGAGGCGTCCGGGTTGAGGTTCCAGGTGCTTGGGTCTGGAATTTCTGTCACAAAGGGCAAATTTGAAAACCT-----------CCCTTTTCCATACGAAGACGAT-GTCAGCCAGG--AGAC------TGGTTAGCTTCCTGAGGGAAAGACTAACTCCAAAGCACTTGACAAGAGCACGGGCCGACCCACTCACTCACTCTTGCAATTACCACTAACAGCT---GGGGATGACCCATCACCCTCTT---------ACTGGGCACAAATAAC s bosTau2.scaffold7277 7888 461 + 39593 ATATGTTAAAATGTCCTTAGAAAAACCAAACAGGGGTTCCCCCTGACCCAGGCCTCTTTCAGGCTTTACCTTGGAAACATCCACTGGCCTGGACAGGAAGTTTGAGGACATGTCGCAGACCAGCACTGCTCCCTTGACATCAGGGATAAAGTCAAACTCCACTCCGTGCACAGTCTCATTGGCGCAGTAATACACATAGGAGGCATCCGGGTTGAGGGTCCAGGTGCTCGGATCTGGAATTTCTATCACAGGAGACAAGTTAGGGACTCCACGTTTCCTCCCCTCTTCCCTTAGGGAGACGGGAGTCCACCAGGTACGACACCCCTCGCCTAGC------AGGGGAGGACTGATCCCAGAGCATT---CACAAGTAAAAGGCATCCTATTCATCTAGTATTACAATCACCACCAGTGTCCTAAAAGGATGCTCCATCTTATTCCTTTGACTTCTACTGGGGGCAAATAAT a score=7457 s mm7.chr19_random 393688 415 + 2598976 TGGGTGTTTAGGTTTTCC--TGTCATCAAGCATCCATCTACCCTGCACTCCTGTTGGTGTCTAATCGCTTCCTCTTAGGACCACAGTGCTTACCCACTCTGGGAACACGTAGTTCCAGCAGGGCCAATCAAATCTATACCCCTAGAGGTGAAGGGTGACTCAGGCAGAGTCA-GTGACTGCCTCACAG-------CAGGGAATGTGATATTATCATTGGGA-CGCTCTAGCAAGGGCATTAAAACTT---CGAATATAAGAAGCTGAAGAGCTGAAGAGCAACTGCAGCCATCTTCCTAGAA--AAGGGACCAATTTCCAGACTACAGTCTACTAGAGGAGATAAGGAGTGACTTAGACAGGGGCAGCA-----TCCCT---------GGAGCCCTTGCTCTCCCCATA----AAACCACCAACCTGCTCCTGGGCTTT-----TAGGTAAACA s bosTau2.scaffold7277 8366 417 + 39593 TAGGTATTTGGGTTTTTCCTTGTCACCCAGCTTCCAACATCCTAGGTCCACGGACAGTGTc------------ctttgggtgccagt-ctccctcactctcagctcatgtgattccaatagaaccaattctacccacagccctgaagggtgaatgcagttcaggcaaggccacttgactgatttggaatgggacacaggagacatgagactgttactgggaatgtttgagcagaggcattgaaacttgggagaatataagg-----------caatgagcagctgcagccatcttctaaaaatgagggggcagccttcctgactg--------tgaaggagacagagggagac---gccaggaccaggagaagtcccctcactgtaggggggcccttgattaagccatacctaaagccaac--ccagcccctgggttttgcaactaagttagcA a score=17552 s mm7.chr19_random 394147 389 + 2598976 CACACATCTAACTGAGATCATTACTGACGGAAGAAG---------------AGCAGCAATAG------------AATAGTA--------------------------AGGGCAATGG-----------------------------CCAGCCACCACCTCACCGTGCATCTTCAGTTCCCAGAACTTACTTGTGTAACTTCCAAGTTTAGGGTGGACAATGTTCACCGTTCCAAACTTCTTGGCTTCTTCCGCAGCCTTAGCTGACCAAGCTCCGGTCACCACGTAGTCAGCACTCCTTCCAGCTTTCAGGCCAATCAGATTTAAGGGGACAGCACTGAACTGGCCAGACCCACCTCCTTGTACAAAGATCACCTTGTAGTTGTTGGGAACAGCTCTGGGCATAAAAAACGAGTGACCATAAATAACATAAACTAACATGTCAAATATGGAGAATGAGGGCTGCCCCACTA s bosTau2.scaffold7277 8917 456 + 39593 caCACAACAGCCTAGGATCACT-CTTTCTGCAGCAGCCAGTTAGTAATCTTAACAGGAACAGGCAGCCAATCTAAATGGTATCAAACAGGGGAAGAAAGAATTGCCCAGGGCAGGGGTAACCTGCTAGCTAAGGAGGGATCACCCACTGGCCAGCATTTCACAGACCAGCT-CAGCTACCAGCACTTACTCGTGTAACTCCCAAGTTTGGGGTGGACGATATTCACAGTTCCAAACTTCTTGGCTTCTTCTGCAGCCTTAGCTGACCAGGATCCTGTCACCACATAGTCAGCACATCTTCCTGCTTTCAGGCCAATCAGGTTTAAGGGGACAGCACTGAACTGACCACACCCACCTCCTTGTACAAAAATCACTTTGTAGTTGTCTGGAATGGCTCTGGGCAGAAGCAGAG-GTGACAGTAAACA------------GGGTCAAAGATTGAGAGTGAGTGATGCTCTTCCA a score=9140 s mm7.chr19_random 395425 418 + 2598976 gtgacgcacatacatatactcaggtatacacacacacaaaataagataaaAT-------TTTTAAAAATACTTGTTAAAACTTACAGCAATTCCCTCACAAGATTCTCTGTATTGCCAATAATCTTGGCAAAATCTGATGACCTGTGACTCATTTCTGTGGAAGCAAAGGAATAACAGAGAAAAAAATAAAAGTTCAAGTATAATACCAAATAAAAAATGGTTGTGAAATTTATGGAGAAATAA--TGTAAGGAGAGTTCTGAGTTCAGATGGCAG------------CACATGCCCGCTCTCTTACTGTGGGGGACAATTACCGAGCTCACACTGATGGTGAAACTGT-AACATTTCAGTCCTGTCGTCACGGCA----GCCATTTTCTCAAGT-GCCACATTAACTGATCGGCCCTTCCCGGCTCTATCTCTTTCCCCAATCT s bosTau2.scaffold7277 11746 417 + 39593 GTAATGCA---ACATACACCTACGTATATGGATTACCAAACAAGAATAACACAACTTTGTCTTTAAAAT-----TTTATACTTACAACAATTCCCGTACAAGGGTCTCTGTCTTATTGATAATCTTAGAGAAATCTGATGACCTGTGGCTCATTTCTGTGGAAGGAAA--AATAAACAAGAAAAATATTCCAGTTCAAA------ACCAAAGGAACAAAAGTTATTGAAGATGTAACTACAAAATTTGCAAGTAAAATAATAAAGTGAAATGTCAGTTATATTGCATACAAATGATGGACCACACATTTTAAGAGAAAAT--------CCAAACTGATTTTCAAACTGCAAACATTTTAACTTTATTGTCACAGCAGAATGATTTTTTTTCAAGTGGCGATAGTCACTGACTGAGCCATT----TGCTAATTTATTCTTCAATCT a score=12516 s mm7.chr19_random 396325 906 + 2598976 AGGAACAAAAATTAACA-CAGGAAGGAAGACAGTTCACCCTAAAGTCCCTTCA-CACAGTGCAGCCCGTGGAACTTGGAAGAAAATgatagatagatagatagatagataggcagacagatagacagacagGTGTAAACTCTAGAGCTTGGAGGTTCTCTTCCTAAACAAGAGCAAA-AGtttaataaataaattattaatGAGCAGGATCTTC--ATGGAGGCTTATGaattttaacttataaatatttatttaaagtttaataa----aaaCTTTACACCGAATGCGAAGCCATATTACATACACTTGGTGGTCCCATCCTGCAAATGTATAGTATCTGCCAATCTCACATCTTGTGCTCAGTAAAAACCAATTATGAACCGATGAGCT---CCGTCTAAAGTTCTCATGTGCACTTAGGCTTTGTCAGTCTTTGACTCTAGCAAACATGCGACCCAAGACATTAAAGTTTAAGTGGACCTGTAACTGGGATTAAGCCCCTCGCCAACATGCCTGCCTTTTCTTTTTTTCCTTCTAAGACAGGATCTCACACAGTAGCCTATAGGTCCCTGTCCCTATAACCTATTACTCTGTATGGAAGACCATGCAGAGCAGAGCCTGGGCTTAAAGGATCTGCTCTTTAGTAAG-------------------------AGAATCCAGGAGTGAGCCTCACCGAGCACACTGATGCCGAGTCCTCTGTAGTCTAGTAGCTGCTTCTGGATCTCCAACAATACCTGGGAGAAGAGAAAGAAGATGTCAG-------TCAGCAAGCTCTGCACA--CATGCCTGGAC----------------------GGCAGAGA----------CGGCTGAGGCCTGGGAGGAGCCA---AGCCCCACCACCCCCAG----------------------------CCTCACAAGTACAACTTACA--CAAGCTGAGCCTGAAACTACGCAACATGATTGATTC-GAGGTA---TTTTTTCAAAAACATAAATTTA s bosTau2.scaffold7277 12292 889 + 39593 AGGAACAAAATTCAATAGCAATAGCACACAAAGTTAACCCTACGATCTCTTTAATACTCTGTAGCCTCTGGAACTACCAAAAAAGAAAAAGAAAATTAAAGGTTTTAAAA----------------------CGTACATTTTAGAACTCAAAAGTCATCTTTCCTAATAACAGAGGGGAGAGAAACAATGGAATTATTAACATGCAAGATCTTCCAAAAAAGGCTTGTATACTTCTA--TACATTCAATGAGTTCATGTCTAAGAACAGCAAAAACTAAAAAGAATGTGAAACAATATTATAAATGTTTGG--GCACTATTATGCAAATACATAGGATCTTTTGATCTCAGATCCTATGTATAGCAAAAACCGATTATGAAATTGTAAGCTGAGATGTATAAACCCCTCACCAGCATTTATGTTGATTTCAAAATTGCTTTGATCAAACATGCCACAGAAGTTATTAAAATTTAAA-------------------------------AATACATCT------------------------------------ACAAATGCCTATGGG--------------------------------AAGACCCAGTAGAA---ATTTTAGGTTTGATGA---TGCATTTTAGTTAGTTCCCTTTAAATCCTGGACATTCACAACATCCAAAAGTAAATCTTACCAAGAACACTAATCCCAATTCCTTTGTAGTCTAATAATTCTTTTTGCATCTCTAGCAACACCTAGGAAAAAAAATAAAAGAAAATAAGATGATTTCAGTATGCTATGCACAACTCTCTCTGGACACACAAACTGCAAAAGAGGAGGGGCAAGGAGAAGCTCCACCCGCTG-GGTCTGTGAGGAAGCATCTGTCCCTGCCACAGCCAGTCCCTTCTCTCTGCCTGTTCCCACCAAACCCCGATGATGCAACTTACATTCAAGTTGAGTATGAAACTATGCAATATGACCAATTCTAAGATACAGTTTTTCCAAAGGCACAAATTTA a score=6017 s mm7.chr19_random 400024 409 + 2598976 AAaaacaaaacaaaacaaacaaacaaacaaacaaacaaaaaacCCAGAGCTTTCCAAAACAGAGAGGG---------ATGGGGGTGGGGGAGATCTCCCAGAAGGTCCCACAGTTCTACCAAAGACCGTCATGTAAGATGAACTGCAATGGCTGCAGAAAAAG----CCCTGT--TCTCAGCTTGTGT---CGCTGTCCCTACAAAAGAAAGGCGTCTTTCCCTCTCTCACACTATCCTGTTTCTACCCCA----------ACAGAGACCGTGGTGTCCCGGGGAGATCGCCAGG--GTTCAACAAAAGATAATTGTACAATTCTTGGCCATGCCTGCGAGCTGTGGCAAGCGGTTACCAGA---------------------------TAGCAGCTTGGACAGCTGGTCCATGGGCTCCCGGC-CACGAGAGGCATCTCATTCCGCACAGC---TGGGGTGCGGGAGGA s bosTau2.scaffold7277 15492 444 + 39593 AAATGCAGAACAAATTACACAGG-AAACAAATATGCAAAAGAC---------TCCAAAACACGAAGGGTGAAAACCAGTGAGGGTAGCAGAAACTT---------TTGCATATTTGTGACAGGAAATCTCACCTATCACAGACTGCAATAACTAAGAAAAAAGTAAGCCCTGTACTCTCAGCTACTATGAGCACTG-----AGAAAAGCAAAATGTTCTTTACCGTCTACAATTATAAAAATTCTCTCCTCTTAGGACAACACAGAGAAGGCTCTGGCCCAGGGATATTTCCACTCTGTTTAACAATAGATAATTGAAAAGCACTTGGCTATGTCT-CATGTTGCTACAAGGTATTATCAGAGTTATCCCGGTTAGAAAATGCAAAATGTAACAGCAGGGGCAGCTGGTCAACGCGTCCAAGGCACATTAGAGACTAGGCCTCCTTCACAGCTGGTGGGGTG-GGGAGGA a score=20882 s mm7.chr19_random 400907 1477 + 2598976 CTTACCGAGTGTGGCAGCTTGGCAGGCCCGGGCCCAAAGTTAACCACTTGCTTGGTGGCTTCCATGGTGCTAAGGC---GACAGCAGGGGAAGTGGCAGGAGCAGA--GACCACGCGAACAGCCCGCGTCTCCGGAT-GCAAAGGCAGAGCGGGC---TTCAGCCTGCTGAGTCGGCGCTCCATTGG-----TTCGCTGTCTCAGGCCGCTCACTGATTGGCTCTCGCTCAGAAGCTCCCCT-CCCTATTGGCCACGC-TCACTATCGGAGTCTACGATCAATCAACTCCTCCTGGAGTTTAGAATTTCAATCGGCTTTAGCGGTCAACGCAAGAGA-GCAGGGGATTGCACCAGCC-----------------ACCCGC-------------GTGGCGAGGTGCCTTCTGCCTTCGC--------------------GCACCTCTGGGCGCAG----AGTCC-CCTGCCCTGGCCTCTGAACAACTTC--------------GAGGTGGCGCGCAAACCCATTGCTCCTGGCCCACCTCCAGC------------------TGAGCTGGGCTATGCTGCATTTGTCCCAGAGCCAGTCCCCACT-GTTCACCGGACTTTCCTAAG-ACCCTCA----------CAGACACTCCGACGTAGAGACAGGACACTCAAAGAAGGAGGTGCAGCGTGTAGAAATGGTTGAAGAGTGCGGTCATAGGATTGTGACCTGGTGcacctgataatcccagcagggtaaatcaggaggatagctacgtggaggccagccacactacgtggagggtccctgtctcaaaaaTCACATACGAAGCCTTTGTATTTGCACTTGCGCTCTAGCTCACTGCCCCACGGGTGGCTACGAACTTTGGGGGCAGccccaccccacccctaccgccacccccaccctcaTCGCGGACAGCCTCTTTCAAGTCGCTGAGTCTCTGTTCTCTCATTATCTCTTTCATGAACTGAG-GAGCAGGAACCTGAATGTTGGCTCTTG-----TGCAGGAGGT------CCTCAAGTT-------GTGAGGAGGTATTAACGGGAGCACAATATAGTCAGGGCCGGAGGAATGTGGCCCTGAGCC-GAGCTGGGCACAGTGCCACATCTGTTCAAACTTTTCCACACAAGTTCCCTTTTCAAAGGAGTTGTGCTGGAGGCTCGCTTGAGATTCTGGAACAAGAAGGCCCCTTCTATGCTAG--GGTAGTTCTTTTGAAGTCCAGAACAT---------TTTAAAA---GCATTTTTCCCTCTACTTTGCAGTTTCACCCAGATTCCTTTACTATGAAAACATTTTCCCAAGTTCTTTTGTACAATGGAT--GGCAGGAATAGGCACCGTGCCTACTGAGCGTTAATGCTGATCTCCGC----------------ATCTGTGGCCTCAGTTTG-ACAGGCGTGCAATTCAGCCTTTGAGCATTTGGGCTCTTGTTTG-TTTCCCATAACCTGTAGAAGGGGTGTGGCTGTGAACAGAAACACTGCTTTGAGTCTGGGAGTAGTAGAGCAAAATTGTTAGAAAAGGCCGAATAAAGCCAGGTCCACGGCCTTCTTCAGCACCTTAGTTTAAAAACTTACATAGCTGGAGATAGG s bosTau2.scaffold7277 16827 1487 + 39593 CTTACGGAGCGCGGCAGCTTGGCAGGCCCGGGTCCGAAGTTGACCACCGGCATCAGGGAGTCCATGGTGCTGCTGCAGGGACGGCAGGAG--TCAGCCGGAGAGGACCTATCGATTGAGCAGCGCAAGTTTGCGTCTGGCGAAGACTTTCCGCTCTCTTTCAGTTCCGAGAG-----GCGCCAGTAGCGGCCTGCACTATCGCTGGCCCTGCGCTGATTGGTTTGCGCAATGGGACTCTCATCCCCCATTGGTCGTGCTTCGCAGTCACGGCTCATGAGCAGTT-GCTCCACCTCGCGTTTTCTGTTTCAACCCTTTTT---GATCAATGCAAGGCACGCGGGAGATTGCACCAGCCTGTCGGCTCGGCTGCTTGCCCGCCCGACAACCGTGGGCGGCTAGAAGCGGT-TGCCCTTGCCAACATGCGTTGGCACTTCTGCACCCTTGAGGCCGGTTCCAGTCCTCCAACCCTGACCTCAG----ACTCCGTGGGCTGCATGGGGAGATGCGGAGTAAATC----ATTCCTCACCCCCATCCAACTACATCTTCACCAGACCGTAGACTGGACTGTGATGCATTTGTTT--GAGTCAGCAGTCATTAACTCACTAAACTTTCCTAAGCACCCCCGCCATGGGCGCCAGATACTACAGGGGAGAGGCAGAGCCCCCAAGGATGGAACTGCAGGGT---GAAATGGGCTGGGGGT-------------------------------------------GGGTGGGT--GGGAGAT---------GAGGTTCTCTGCAAAACATCAAGGCGCCAAGGCTTAAAGCAGGATTAAGAGACGT------------------------------------GTGTTGCCAAGGACGCTGAGAGGAGCTTTGAC---------CTGGGAAGTCTAGCTGCTTCCCAggcaagtccttttaagttgctgattctccgtttcccc----------ttgtgaaaagagcgagctggaacctg-gcattacctctcgggtttcgcaggcgctgacaaactgtgagtttaGAAACGTGAGGAGATATTAACAAGAAAGCGATACC-------TCTGGGGAGCGTCAGCCCAAGCCAGGGCCAGGCACAGGGCCAGCACAGCTGAAACTTTTCCACATAAGTGTTCTTCTCAGAAGAACTCCAGTGAAGACCCACATGGGACTCTGAAATAGGGAGGCCCCCTTCCTGCAAGAAAAAAGTTCCTTCGAAGTCTGGAATTTCATCATTTGTTTAAAATGTGAATTTTTCCTTCTACTCTCTAATTTAACCCAG-----TTTCTTATTAAAATATTTTCCCAAATCTTTGAGCAAAAGTGATACACCAGGAATACACAGAATGCCT--------TTTCTGGGGCTTTCCGCCATCACACCAGCCAGTGTCAACCACGCTAGTTTGAAAAGGTTTGTAAACTGAC-----AAGGTTAGGACTTTTGTTTGCTTTAGTGTGGTATGTGGGAGGGATTGAGCTAGAATAGGAGGTCCTGCTTTAGCTTTGGGTGGTGGAGGGCAAAGTTTCCAGAAAAAGCTGAAATGAACAAGGTTCACTGCCTTCCTCTGCACATTCATTTAGAAAATTGCAAAATTGAATAGAGG a score=15979 s mm7.chr19_random 562268 953 + 2598976 TACTTTATCAGCCCGCAGAGTGAGGCACCCAGAGGAAAGTGTCAACTCCTTCCATACCTGTCAGCAGCCAGCAGGCTTGAAGGAGGCTCACCAGACTCATCCCCAGTGTTCCTGATGGATCCCTTGATCCCCAGGATGCCCAGGTGTGCAATGGGTCTTATGGTAGGAGGTC--TGAGACCTTGATGTCAGATGCTATGAGTGAGGCAGACCCTGC-ATACATTCTGTGGAGATGGATGGAACAAATAGG-GGTTGGATTTTGACTAAGCTGTGCAGTACCAGGATCCTCCCAATATCCTCTTCAAGATGGCCTTTGTGATCACTTGGGCTTTCCAGTATGCAGATGAGTCCCTGTTATC----AAGACTGTCAAGCAACTTA-----------TACTCAGCACATAGGTCTCATTCCTCTAATGTATGCAA--AGAACTCGAAGGGACACAGGGAGGG-----------CCTGGGCTTGCAGAGAACTCGCTGATGGA-AGGTATGAAGAAGCAAAGGA-----ATGAATG-----------ATGCCCACTAGAGAATTTCAAAGAGAATAACTGAAATTTGCAGGCACTTGGCATTTGCCAATCC--CTTCCAGTTGCCTGGGC-------------TCTCTTGGTCTTTACAAATC---TACTATGGAGGGCTTGT------TCCCTGACCCAT------------AGAGATGAGGCTTGGTAAGATTAAATGATACACA-----------GGTGTTCTTGAAAACATACGTGAAGACCAAGTGCAGGGAAGCTGAGCAGTAGGCTGACATGTTGATAAAAAAAAGTTCAGTTCAGTAACATGGTTATTGGATGTCGATATTCTATGAGACACATCT-------CTGATGTTTAATCACTAAG---------------ATCCTTAATGCATCAAAATGTTCAGAACATTAAAAGATTAATTAA--ATGTAAAGACAGACAAAAGCTTTGCTAAAAATAATTCCTCA---------------------------TACCAAATTCTGGTCTTCCTGACTGCCTTGAAGTGGCTACTATACAACAAAAGGAGCCCATTTT s bosTau2.chr26 11220409 1079 - 35715000 TATTTTCTTTCCTTTCATAGCCAGGCATCCAGAGGAAAATGTTTATCCCTCCCAAAGCCACCAGCAGCCTGCAGGGCTGAATGAGACTCCCCCAACTCATTTTCCATTTTCCCATTGGATCCATTGATTCCAGGCCTTCCCAAGCCTGGAGTGCAACTCATGTTGGAAATTCCATAAGACCTTG-TGTCTGGTACT----GTGTTGTAGAGTCCATAACACATACCATGCAGCTGAAAGTGAGATTTTGGAAGCTGAGTTGTTACCAAGCTGGGCTATTCCAGCAAACTCCATGGAGCCTCTAGGAAATA-----TTTCATCATTCATGCTTTGGGTTTCACAG-TTTTTCTCTATGATCTCCTAGATTTCCTAAGCATTTTAAATTTTGTattcattcaataagtaggtcttagtcacctactatgtgcaagCAAGATTGGGAGGGATAAAGAGAGGGAGGAAAAGAGATCTATGCTTGGAGAGAGCTCACTGATGGACAGAAATAAAAATGACAAAGATGACGATGGGTGGAACAAAATGAGTGTCTGC-AGAGAA-TAAAACAAGAAGGGCTGATAGTTTCAATTAGTCAGCatcttccaagcatgcttccaatttctctaacatgcatcaatactttatttaatcctcacacctcttttatcatgaaggcagtattagtagtacctgtcccattttatagatgagaaaactgaggcacagagaggttgaataaTACAGACATTCCTCTACTGCATTCCTGAAAATACACATGAGGATTGAATGTATAGAAGTTGAGTAGCAGGCTGGAGTGTT-AGAAATGGAGCTCTCTTTCAATGACAGA------AAACATAGAAATTATCTTGTACAAGTGTTCAACAACTTATACTTGATTATTTAAATTTAAATATTCTTTATCATTAGCATATCAAAATTATTAAAACCCTAAAACATTAATTAAATATGTATATATAGACAAAAGCATGGCT-AAAGTAATTTCTTACCTAACTCTAACTTAACTCTATTTTCTTACCAAATCTCTAACCTCTTGGTTGACCTGAAATGGTATTTATAAAGCAGAGTCAGTTTCTTTT a score=7689 s mm7.chr19_random 563374 486 + 2598976 ttcgtgtatacatatgtatgcgtgtacttgtgcatgtgtATTCACATGTGCATACATTTACATATGCAAGGATTCTGGG----------CTCTGAGAAAAG-----ACGTCTAGGAA----AAACACTAACTGACAACTGGCTGTATTTTTGACCCCTTTTCTTTCCAAATGTATTTCTTTA--TTTCCAAACATGTTCTGTGGTTTACTTTTCTGCTCAAAGACCAGAAAAAAATAACTCTATATTTGCCTTTAGCCTCCTGCAGTGTAAGGCTCATGAGTCTTTGTGAACAGAACTCCCAGGGTCACATTGTGAACTCAGaaaaaaaaaaaaaaaaaaaaaaaaaaaCCACTGAACTTGACAATTTGTAACTCATCAA---CTTCATACAGTCAAGAGAATTACCTATGTAGGCATTCTGTTGCCGTGAGGCACAACAACTTGGG----CAGTGCCCCATGGTGGGTCCTGTGGCCAAATCT---TTGCACTATAGCCCAGGATATGAGGTAGGG s bosTau2.chr26 11225567 472 - 35715000 TCTGTGTGTACACATGCGGgtgtgtgtgtgtgtgtgtgtgtgtacatgtatgtCTGCCTGCATGTG-----ACTATGGGTGTGTGCAGCCACTGAGAAAAGTTCCAACGAAAAAGAATCCAAAGTGCTAAATGTCTTCTGGTGGTGATCTGGG-----ttttcttctttatgcttttctttgcttttcaaatgattttctttattttacttttctAATCAGGGG------GGAAATG--CTTGTGTTTGATTTTTACCATCTGAAA-ATCAGGATGCCAAACCTTGATCAACATATTTCCCAGGGTCAC--TGGGAGGTTCAAAGAGA----------------------CACCAGATTCCAGGGTTTATAAACTGTGAAGTGCTGTACACAGTTGGG-GAATTGCCCATATAAGCACCCTGAAGCCTCGAACCTCCTTAACTTGGGGGCACAGT-CCCCCTGGTGGGTCCTGTGCCTGTGTCTCCCTCACACCCTGGCCCTGAATCTGGGTTGAGG a score=64058 s mm7.chr19_random 564384 2187 + 2598976 CCCTGGACATGGCCCCTATGACTTGGGGAACCCCTAGA------TACTTTCCCCAGCTCACCAATTCAAATTCATCTCTAGAAACGGAGTAGGGGGTGGCAGAGGGAT-----GAATCAA----CCCCTCTGCCTTTTTCTGGTTCTCTTCTGACTTTTTTTTCCCCTCCACTTAAAACAAACTTGGCATTTTAAGCAAGATACCAGCACATATTTATGGGAGTTTAATAACTTCTTCCATTAATAACATAGACAAACTAATTTACCCAAACGTGTCTGTTTTAAACTCTGGGAACAAAGAGTAGGAGGACGAAAATCAATCTTGCCTTTGTACTTGAGCCACTGACCCGTTAAAGCTTTGAAGATCATTCCTTTAAGAAATTGTCAGGAGTTATTTAACCACAAACAGCAGCTACCTTCCCATTCCAGCTGCGTAATCAAGCAGAATAAATTAGAGGTTTTTTTTTTTTAAGAGTTAACTCTATTTTTTTTCCCC-TCTGTATAACTGAAAGTCCTTTACAACAAGTTGATAAATAGGCACCATTGCCAACAACAGCAAGCTCTCCTGGTGCTGAATCAAG--GAGCCACATGAAAGCTG-CCACAGACA--------------GCCTTGCAACAAAGGCCCAGGTGGCACCTTTAAAGTAG------------TTCCTGTCACCAGGAGAAGCAAGCACAGCCTTGAGATTCAGGGACCCTTCACTGGGTAGCAAGT-CTGGCCTAAGCCCTGAATACCCACTCTACCGAGGGACCCAACATTGAGAAAGTACAAGTCAGGCTGGCACGAGTGCCAGCA-CAAACAG-----TCCTTCCCAAATCTAGCCAGCATTCCTCCATACAAACTGTTCCAATCCACACTGATAAGAATCAGTCTCCGTGGGTCTTGAAAGAGTCAAAGGCCCTTCTTAATCAAACGATCAACTGTTCATTTTTAAAGCTTGGCTGGTTCAATTAAGACCACAGGCAGGAGACGGGCCGGTCATATTACCCT----------------GGCCGGTCGCCGGTCCTGAAA-CCTACCCCTGACCAGCCCACTCCTGGGTCTGCCTGGAATGCCCTGGGCCCCAACCCAGTGAAATTCAACCCAGCCTTCAAGGCCGTATGCTGGACCTACCTTTTTGCAGAAGC--TCTCTGGCTCCTCT---TGGCAGTGACC---ATTACCCTTGCAACCC-ACAGCCATGCATTATGGTCCTTTATATAGGTCTCCA---------GCCCTAAGTTGTTCTT--CGACTTCC--------------TAAGCTTCT-GAGGAAGGTGACCACAATGAACAGTGTCCATAGGAAAGACT---CCATTGGC---AGCCATGCCTTTTGTCCACTTCAGGGTTAGCCTGTTACCAGGCATCCCTC----ACTTTGTGCTGTGCT------AGACAATTTCTGAGTCAGG-TGCCTGGAATCTAGAATGTAATCCTTC--CATTCTTCCAGAACAAAAATATCTCAGCCCCCTGGCCAATCTGCATCATAGCAAACACCAGGATGGTGTCAGGTGGACTAGCCACTCCAGCGGGTACCATCTCACCTGCACTGTACCTGCCACAGAAGCCTGCAAGTGGTACATACCTGTCACACAGCCCAGGGCTGCTCACAACCTGGACAGCCCAGGCAATAGATTTAACCCACAGAAACGAAGGATAGAATGTCTTCCA---GTCAGACTAAGCACTTAGCCCCAAACTGAACTACAG--CAATGCTTCAATGGGAGGC--AGTTGTCTCCCCTCTGTCTTATATCCATCCCCGCCCACCCAGGCCCTACACAGTAGT------CATAGTACACAGAAGAG-CTCACCTATG----TCCCCCACTTCTGTTCCCTC---------------ACCTGATTGCACCTAAATGAAAATACAGGGACCAA---AGTGAGCCC-------------ATGAGCCCATAAG------------GTTTGA--CTGACATCAACTCAGTGGAAAGGGGTGGGAATAGCAGGATGACCCAGGAGCTCTATGGGAGTCATGGAAGGCAGTATCCTCATTGTTAGTCAGTGGGGGAAAGCTGTCCCTCCACACACACCTGAGCCTGGCCCTT---TGTGTTAGCTCTAAGCACCCACTTCTTCAATGTGGAAACAGAGCACAGACACCCTTGTCCTCTGGCATCACCTTAGCATGGGCCGTCATCT----CTCCGTCTGTCCTTGGCACCAGGCCACAGGGAACAGCA--------CCTCCCTCACAGCCTCAGCCCCAGAC----------------------CTCAGTTCTGATCCTGCAT-TCTGTTTATCCAGGGTAACAACTAGACAGACATGCTGGGTTTTTTTTTTCTA s bosTau2.chr26 11226314 2278 - 35715000 CCTTGGGTATTTGTCCCAACATTTAGGGGGTATCTGGAGCCAGCTCCCTTCTCCAGCTCACTGATCCCAATTCATATCCAGAAATGAAATTTACGAAAGCCAAGAGATTCAAAGAACCAAGGGACCTTTCCCACATTTTC-----CTCCTGAGATTATTTTTTTTTTTCTCTGTAAAACAAATTTGGCATCTTAAGCGAGATACCACTGTATATTTATGGGAGTTTAATAACTTCTTCCATTAATAACATAGACAAACTAATTTACCCAAACGTGTCTGTTTTAAACTCTGGGAACAAAGGGTGGGAGGAAGAAAATCAATCTTTCCTTTGTACTTGAGCCACTGACCCGTTAAAGCTTTGAAGATCATTTCTTTAAGAAATTGTGAGGAGTTATTTAACTACAAACAGCAGCTACCTTCCCATTCCAGCTGCGTAATCAAGCATAATAAATTAGAGTTTTGTTTTT-----AAGTTGACTCCTTCTTTTTTGTGTGTGTGTGTAACTGAAAATCCTTAATAGCACTTTGACAAATCGGCGTCATGGCAGACATCAGCGAACTTCCCTTGCACTGGAGCTAGTTAAGCCAAGCTGAAGCCATCCGGAGACATTCCTGATTGGAGGGCTTTGGGAGAAA--CCCAGGTTTTACCTTTGAAGCAGGGCTTGATAAAGTTCCTGACGCTGGCAGGGGTGACCGATTCCCTGGGACCCAGCCACCCTGAGC-GGGTGGCAATTTCCGGCCTCAGCCCTGAACGCCCAC-CAGCCGAGGGACAGTCCATTGGGGAGGAGCAGCTTCGGCTGGCCC-----CCAGGAGCAGCCAGGCACCTCCCTCCCAAATCTGGCCAGCATTCCTCCGTGCAAACTGTTCTGATCCACTGTGATAAAAATCAGTCTCCGTGGGTCTTAAAAGAGTCAAAGGCCCTTCTTAATCAAATGATCAACTGTTCATTTTGAAAGCTTGACTGGTTCAATTAAGATCACAGGCAGGAGACGGGCTGGTCATATTACCctcctttccagccagcctggccagtcgccgtccccaaaaacctacctttgaccagcccactcctgtgcctgcctggaatgttcca--ccaccccctgatgaaatctgacc-acccttcaaggccttatcctgctcccacctccttccagaagccttccctgggcccaccagctgccagggacctgccttccctctgaaattttgcagccattttgtgaatcctttcactcagggttttattgtggtctgtctcaagctgctctttaccacttccgagcaatcagactgcaagctccttgaggAGCCTGGCCATGGGACGTGGCCTTCCTGAGTACACCCTGACCACTGACTGAGGACGGGCCTT--AATAACCCCTGTGCGAGCCTGCAAACAGGCAGTCCTTGACAACCAAGGGTTG-GCTTCCAAAAGTTCATTTGTGAGTCAGGCTGTTTGGAATTCAGAATGTGCTCTTTTATTTTTTTTCCAAAATAACAAAGTCCTAAAATGATG--CAAT-------------AATGCTCTGGTGGAGACTGGATCGCAGGCTAGCCCACAGAATCCCATTTTGCCCGTA------------------------------ACATACCTGCAATACTACTCA---------ACAGCC---ATGCTCCAATTAACAGTGTTAATCCACTGGGA-----GCTAAATAATTTTTTATGGGCCAGCCTGGGAACTTGACCCCACTATCCACTAAAGGGAAATGCTTTGGTGGGAAGCCCAGTCAAAGCTCCCCAGCCTTCCTCCCATCC------------GTCCAACACCACAGTAGCTGGCAGGATACAGAAAAGAGGCAAACCTATGGATCTATTCTCCTTCTGCTTTCTTCTACTGATCAGGTCAGCCTGGTTGCCCTGTAATGAAAAGAGAGGGAGAGACTTAGGGAGTCCTAGTTGGCCAGAGATGCCCCTGTCAAAGCCAATTCTTTGTTGGATGCTGGCATCA------------GGGGTGGGGGTGAGGG------CTATAAGTTC---AGGGACCCTGGGAGGCAGCACCTACATCTCAAGTCTGTGGAG---AGCTGCCCTTCCAAGCATGCCCAAACCCAGCCCTCAGACGTGttctctcccaa-aggcattatttcaattgggagacacagca--gacacccatgtgctctGATGTCACTCTCACGAGGACTCTCATCTTTTTCCCCTTCTGTCCCTGGCACAAGGCCAGGTGGTACAGCATTCCCCCGCTTACCCCACCGCCCAGCCTCCAAGCACAGGGTCAGTGCTGGGACCCTCTGGGCTCCAATCCTACCCGTCTGTCCACACCTGGTGAC-------TAGACAGGCTGAATGTCTATTTTTTA a score=52931 s mm7.chr19_random 566615 1430 + 2598976 CCATCTGCTACTCATCTCCCTCATAG----CTCCTGTCTCCAGACTGGATA-TATCCAGAACCCTGTGACATATCTGCCCC-----ATCAAGGAACCAATCAATGACGCTTAT--------------------------CACCTCAGGTTTCAAATACAGCAACTCTCTAGCCTGTGTGATACTAGTCCACTTCTACAACCCAATTACTGACAGCAGGGCAGTTGACCTGGGGAGAAACATTGAAGGGAACCTGCATGGCAAGCATGTGGGGACAATCTCAAGGCAGAAGCCTCCAGAGGGAAGCTGTCCTCAGAGTGCCTTACCTCGTCACCGCCTCACTCTGCTGCCGCCGTGTTAGAACCCATTTAAAGCATTCAAGCATATAATCAAATTTCAGTAATGAGTTATTAATTAAGCAAGGGCAACCAATTCTCTGCTAACTGCCTCATAAACAATCGACAGGAGATTTGTGAATTTTGACTTCCTGACACTATTAAACAAATCAATATTAGGCTTCAGACACAGCGATTCAGACAGTTTTCTCTGTTATTCAGCTACCAGCTGTCTGGAATACTAATGAAAGAATTAAGAGCCGGGGATTCTGCAGGCGTTCCATCAAAAAGATCCTTATCTGTGGGGAATTGGGGCCTGATTTGCATGGAAGAAGACGTTGCTTTTGTAGGTACAATTTTTCTCAATATGTCACTGATAAGTATTTCTCATCAAAGTGCTGGGCAGTGG-----CCACCA-GCTTCAGAA-GAGCAGCCGGCGCCCTACTGGAGACGTCTCCGAACAAGGCAATTCATTTATTTATGTATTTTGGAGACTAGTTAATTTATAGCTAAGCTAACTCTTGGAAAACTTGAGGCT---AATACAGCCAAGCTCCTTACTCAGCTTTT---------TAAAGCTCC-TATGTGCGGGTATCAAAACACCCAACTCAA--AGGAAGTCAG---TTTGCCAAACCTG--------------------GTCATGACATCACACACGTACCTTTGATTTTCTCCCTT--TTTCCCCTCTCCATT---GCACCTTTGGAGTTCAC-TGGATAAACTCCATCCCTGATTAGA----TGTTTAGGGACAATGGTGGAGATGTTCCTTTGTTTATCTAA-GAAGAAATACAGCATACTC-GTTGCCAAGCTGAAA------------------------CCACCCCCAAAGTGGTAGATTTATGTCAGGGCTCACTCAGCATGTGTAATCCATTTGCTCTGTGCCCTCCTGCTTTA---------------GCCAATTAGCAGTTGACCTGAAGATTTAAGGACTGAGATGAACATGTCGAGGGGTACCCTCTCCAGGCTCTGGGATGCTAAAGGTCACCTGCCTATCACAGGGTCACCAAAATTCCTTGAGGCTAATCACACAGATAGAGTTCCTATCTTGCA----TAGGTGCCTGTATCATGCAGATAGTGAAATGTTATAGGCACATACGTGTGTGAAAAGATATGCATACACA-----ATTCCAATATATA--AATGTAGTACATACATCCAGGTAT s bosTau2.chr26 11228645 1519 - 35715000 CCATGCACCACCCCTCACTGCCAAAAGAAACTCCTACTTTTAGAATTGATGCTTTCAAGGACAATACCATGTATATCTCTCTTCTGATCAAGTGATCAATAAATTATATTCACATCAGTGATTTTTCTAGAAACAACTCCATCCCAAAATTTAGACCCACCCTGTATTCAGCACATGTGACCCCAGAACACCTTTTCAACTGACACATTAATGCCAGGGAGGTTGACCCTGGAAGGAAAGTCAAAAGTGGTCTAAGACATACGACTGTCGGGA-AATCCTTAAATGGAAGCTTTCAGAGA---------CTCG-------TTACCTCGTCACGTCACCACTTTGCAGACGCTGTGTTAGAACCCATTTAAAGCATTCAAGCATATAATCAAATTTCAGTAATGAGTTATTAATTAAGCAGGGGCAACCAATTCTCTGCTAACTGCCTCATAAACAATCGACAGGAGATTTGTGAATTTTGACTTCCTGACACTATTAAACAAATCAATATTAGGTTTCAGACACAGCAATTCAGACAGTTTTCTCTGTTATTTGGCAGTCATCTGCCTGGAATACTAATGAAAGAATTAAGAGCTGGAGATTTTGCATGTGTTCCATCAAAAAGATCCTTATCTGTGGGGAATTGGGGCCTGATTTGCATGGAAGAAGTCTTTGCTTTTGTAGGTACAATTTTTCTCAATATGTCACTCATTAGTATTT---ATAAAAGCTCTGGGCAGTGGAACGTCCACCAGGCTTCAGAGCCAGCAGCCAAAGCCCTACTGGAGATAGCTCGGAACAAAGCAATTCATTTATTTATATATTTTGCAGACTGGTTAATTTATAGCTAACCTAACCCATGGAACACTTGGGTCTAAGAATACAGCCAAGCGTCTTACTCAGCTTTTATTTTTTTCTAAAGGTCTGTTTGTTCCAGTGTAGAAAGAGCTCACTAAACCGGGAAGATGGGGTTTTGCAAAATCTGAGCGACCTCTGAGTGGCAAAGTGTGGTCATCTCG-GTTTACCCTCAACCTTCTCTCTTTCTTTCTCCTCTTTGTTTACTTCCCTTTCGCACTCATGTGACTCAACAACAGTGCTGTTAAAAATACCTTATAGAGACAATGAAAGAGATTTACCTCTGTTTATCTAAGGAAGAAATAGAACCCAGGCAGTAGCAGTGCTGAGGTGCTCTTATTCTTCCTTGTGTACCCCAGACCCAGAGTCAGGGATTTGTTCAAGGGGTCACTCTGCAAGTGTAGTCCATTCCCTACGTAGCCTCCTGGTTTAGTCGGCCACAGAGGTGCCAATTAGGAATTGACCTGAAGTTTTAAGGATTG-GACTAACGTATGGATAAGGACTCTCTTCA--------GAGGCAGAAGATCCGCTGCTTATCACCCACTTATGTAAATTGCTTGCAGCACCTC----------TGTTCAAAACACCCACAACtatatgtctgtgt----------gtgta----tacacacatacacatgtgtacacatatatgcacacatatatagtttttagtagatatttatatattatgtacttttatatat a score=30150 s mm7.chr19_random 569741 1454 + 2598976 ATTAAGATAATTCAT------AAAAAT-----AAATATTTCGGAAGTATCTCTATTTCCCTCTATGTCTCTGTTCCTTGTCTTGATGGCACAACCTG-AAATACATTAGGTATTT-AAAACACATTGGTTCAAAGCATTGGCCACCCACTAAGAGAT-ACTTTGCA------TACTCAAGAAGGGTGTTTCCAGTTCCATATTTCTGGGTGAGGCTATGTTGGTCTTTAAGTGCTGTTTTCAAACCACAGAAACTA-----GTCAGTTTAAGTAGAAAAGGATT--TATTAAGAAAGATTATACATTT---AGACTTTCTAGGAGGACTAGTGAAAATTGATTTGCGTCCTAAAAGATCTA-ACATGACCAAAAGAGGATCTTTTGCTAGACGATAAAGCAA---ATGCA----CTGTACTGTCAAACTCAAGTTCTCTGCAGCCCACATATCAGAACCTCTGTTACCGAATAATGGACTCTACAAACTTCACCACAGGGAGCTCCCTCCTCAAATACT---------CTGCCAGC---CCTGTCACAATCTGACCTTCTTGTGT-TGGCAACC--CGTCTCCTGCTC----------CGGGAGTTGCCCTGGTACATCCATC-AGTAGAATTCAGATCAGATGCAGATTTCTAACTATAACAGAATCTGGAAAACCTGGCTCTGTTGAGCCTGTATCAATAGATTGTATAAAATACCGAGTGATGAATAAGAAAGGTGCATGG-CGGTTAACAAGTGATCTAATCCACAAG-CCAGCCATAGATGCACTGGCCATCCTTTCCTGCC-----ACTGTAACCTAT-TATAGCAAGGCTTGCAATGCACTTGCACAGGACCCT------GTAGTGACCTAAATACCCCCTGGCCATAATTTTAGTTTCTACAAAAGTCTCCTTGGCTGGGTATTTACAGCCAAATCTAAAGTAAAATGAAAAGAAAAGAAAAAAACTAAGGTTGAGGCTTTACAAATTTCATC------------------------------------TTTGCTATTTCCTGATCCCACAAAACAGTCACATCAGAGAAAGAATCAAATAACTGGAGTGCCCCATTTACACACAAGCTGTGAGACTATACGAGGGTTTATTTGATTTCTCTAAACCTCTGCTTATTCGTCTAGAAAGAAAAGTGGAAATCATT--GCATCATGACTAGAGTCACAGCAACAGACTGAGGTGACATTTGC-CTTGTCTAGTGTGGAAGCCAGAAAA------AAAAATCGAT-------ATTAAACAAATGCACCCATGAAGAA-ATTCGGGAAAAAATCAAA--CCAAGAAAGGAGGTTT----------------CTTGGCAACTCTGCCATTGCCGTTCTCTTGCTGAGTAGAACGTGAGTTACTCGATA-TCTGCTTAATGCAAGAAGGTCTCATGGCCAATTGCACAGTGTAAAAATAGGATTATGTACCCAGGGAAAAGGAACCTTTTATAGTAGCAGTGACTTGCTTTAAAAACAGAG---CTGTTGACACTCAGGCTTAATTAAGCTGCTTTCTTGATGAATCTAGTGTGGCAGGGACCTGCCCCTTCCAC s bosTau2.chr26 11233148 1554 - 35715000 ACTATAATAATTCATCAAATGAAAAATCCAGAGAAAATTCAGAAACTATCTCTGCTTCCCATCAAGCTTATATTCCTTGCCTTGATGGAGCAACCTGGAAACATATTATGTATTTTAAAATATACTTGTTCAGAGCACTGGCCATATGCTGATGGACCACTCAGCAACTGATCACTCAAGGTTGACAGCTGCAGTTCCATATTCCTGGATGACACAATGTCAGTCTTTGAATATTATTTCTGGAcaacagaagctactccggtcagcttaagcagaaagggactgttttcaaggaaaattgagtagctcacagaacctccaggagtgttggagaac-cagatttggattctacAAGAAAGACACTTAGCCAA--GAGGCCACTTCACTGG----TAACCCAACCCATGAAACTGTTGTTCTATAAAACCCAGGGTTTCTGTAGTCCACTGATCAGAACCTATGGTACCAAATGAAGGGCTCTACAAACTCTACCAGAACCAGCTGCAAACACAGATACCTACACCCACCCACCAGCATGTCTG-CTCTTTCTGATCTTCCTACATGTGGCTACCATCTTCTATTGCTCGCTTCACTTCCAAGATTTGCA-TGACACACAGACAGAACAGAATTTAAGTCATATGCAAATTCCTAGCTGCAAGGTAATCTAGAAAA--TGTACTTGTTTTGTTTTAAGTTCTAGAGCATCTATTATACAAAAAGATACGCTAGAAGAGAGTTGGGATGAGTGATAAGTAAGCCGCTGGACAAAATCAGCCACAGTATTGCTGGTCATAGTTTTCTATTTGGAAAAACTAACCCATACACTATGAGGCTCACAATACACT-ACAGAGTATCCATGATGAGTAATAACCTGa----catttgtaaactaatttaattttcatacaaatacccttggctacataggtaccatcttacctgcag----atgagaaatctgggag----ttagagatg----tttagaaattttctcaacatcataaagctagtgaatggtagagctgagcttTTTTCTATGTCCTAGTCCAGCAGAAAAGTTATA-CATTGAAAAGATCACAGAAA--------ctcagccagtgaccagccaagtggct---taaacttttatctgacctcctcaaacctcaagttactcatct-----gaaaaatggagataattatgcttcaaaggtggcatattgaaggtagaataagatattatatgtaCATCCCTAACTTGGGATCCAGAATATAATTTAACAGTCTTTTAAAACAGTTAAATAAATAAATGTATGAAAAAGATTTAGAAAACAACCCTCTCCCAAAAAAGAAGACCTTCCTAATTTCTCACTCCCTGACAACCCCTC--------TCCTTTTATTGAATGGGTCATGATTTACTTGATAATCTGCCCAAGACAGGAAGGATTCATGGCCAGTAGTTCAATGTTAAAATAGGATTATGTGCCCAAGCAAAGGGAACCTTTTAGAGTAGCAGTGGCTCGCTTCAAAAACAGGAGGCCTGTTAACACTCAGGCTTAATTAAACTGATTTCTTGATAAATCCACTGTGACAGGGGCCAACACCGTTAAC a score=31251 s mm7.chr19_random 574296 1071 + 2598976 GTTTTCTCTGGGTTAAAGGGGATTCAGCAAACTCAAAGAAAATACTTCCTGAAGCAGAGGTTTGAACTGTGCCAATTCTGTGACACAAAGGGAGCCATTTCCAGAGCAGACACACTGATGAGGACCGACAACTCTATGGCCACTCC------------CGGGGGATGGGCAAACATTTCTCTTGGACAGGTACAAAGGCCCCACCCAACCACCACATGAACCCCTTCGGGGGTGGGGGACACACCCGACTGCCAGTGATGGA-TGCCCCCACTTTTAGTCAATTACCCTAATTCCTCACACATGCAGAG--TTTCGGAACTCGAAACACACCCATTATCTTGCTTCAGCTT-GTAACCACCCCACAGGGGAAGTGTCCAC---ATCTCTATTAAGCATGTGAAC-AAGATAAAACTCAGAAAGGGGAGGTGGT--GGAACTCAATGAGG-----ATAGCACATG----------------ACAGCTT--------------TATGTCCTGCCGGGTTGCTCCATT-CCTCCTTGAACACTT--CCACAGGCCATGACAA-CACACC--ACTG-GCAGAATGAGAA--------------ACTAGGCATCCATCATTATAGCCTCCTGCTTTTGCAGAGTTCTTACATGCAAGCCTTTGCCTGAGGGACCCTTTTAGAAAGCGTTCGCCTCCTCGAAGATGCTACCTTGAGATGTGCCAAGAG-AGATGGCACATGTCTTATGTGAG--TTCTGCCTTCACGGTTACACACTCCATCCAAATCTTGTCCAAAATATTTGTGGCTTGGACCTTTTATCTTTTCCATATT-CTTGGCCACACCAAAGGAGCataataata---ataataattcatattattataaCATTCACCCT--AAGAATTCCTTTGAAATTGTTAAATAATAGCTCCCATTTCTCAAATTCTGGCTGTGTGTCAGATCTTAGGCTTTG--------------TGTACGA--------TCCCTATTACCAACGTACAAGGCAGCTC---ATAAGACAGCTACCTGTCTATCTGAGAGAAAATTCCCTTTCTACCa--------------------------------------taaagacttgaaacttcccagcctcctttgcagctaggctagccattcttgactacattcagatggagaagatgttattgtaagcaatgtgtacaacACAGGTGTCAT s bosTau2.chr26 11239467 1202 - 35715000 GTCTCCTCCGGGCAAAAGAGGATTTACGAAACCCAAAGAAAATAACTCTCGAAGCAGAGGCTTGAACTGTGCCAAGTTTGTGACACGAAGGAAGCTGCTCCCCGAAAGGAAGTTCTGATTAAGACTGACAACCTTGCTGCCACTCCCGGGGGAGAGGGCGGGGGACAGGCCGGCATGTCTGTTGGACAGGTA-GGGGGCTCCACCCACTCACCACATGAGCCCGAGTGGGTCTGGGGGACACACCTGACTGCTGGTGATGGATTTCCCCCACTTTTATTTAATTACCCTAATTCCTCACATCTGGAGAGCCTTTCAGCATTTACAGCACACCCATTATCTTGCTTTTGCTTCCTAGCCACCTCTTAGGGTAAGAATCGCTGTGGTCCCTGTTTTGTGCGTGGGCAAAAATGAACCGAGGAAAGGGTGGGTGATTCACAAGGCAGTGAGACGACTAGAACGCAAGTACCCCACTGTTTCCTGCAGCTTTCCCCATGAATACGTATGTCCTGCTTCCTTTCTCCCTCGCCCTCCCGGAAACTTACCTCCTGAGTGTGACAAGCAGAACTTACTGAGAACAGTGAGAACAAATTCATAGGTTGCTCTGTGTTCATCACTGCAG----CTGCCATTGCCAAATCCTCATAT----CTCTATACCCAAGGGACATCTCTAGGGTGCCTGTGCTTCCTCTAAAACTCCATCTTGAGAGGTACCTAGAGCAGTTGTCCCATCCTAGAAGGGGGGCTTTGGCCTTGCAGACTAGCCACT---GCCTGATCTTGTTC-AAACATTTGTGGCTGGACTCTTTCATTTTTCCCACCCCACCCTGCCCCATCAAAAGAACAAGAAAATATGTACCCTGATT-ATATTATTATAACATTCAACTTAAAAGAATGCCTTTGAAACTATTAaataatagctcccagtactcaagtgcaggcactatgtcaggccctgtgctttacagtttaagcacactgcctgacttagtcctctctacagccAGCTGATGAAGCTATTtgtggtaagacagctagttatccatcagagag-caatgctccttcttccatagtaagagaatggtagccaaatacctggttgcccagctaaagact--acatttcccaggctcctttgcaactagtctggtcat--gtgactacatttatatcagtagactgttgttgtaagctctgtgttcaactttggggTCat a score=8212 s mm7.chr19_random 576397 601 + 2598976 GAGCTGTAAAGAT-AGTAAAACCCATAGAATAGCTCTAAAGGGAAGAAAATGAGTCCCTGGGCCAGGCCAAGCCTCTGAGCAGGGAATCAAGCTTGCTGGGCA-GGGCTAGAT-CTCTTCCAGAAGGCTCAGTGGAGGAATCAGGCTCTCGGGAAGAGAGGCCCATAGGACAGAGTTCCTCAGTTAGGAACCCCTATATTCATGGATGTTCACCTCATCTTTCCCCCTCTATGTAG-----AGTGTGTGTCCTG-----TGAGAGGTGT----CCTCCCATTCCTGCACTGTGATTTCTCTTGT----TAATTGCATCTGTTCAGTAAC-TCTGACCCAGCTGTGCAGCAAGAAGTAGAAAATGACAGGGACAGACAAG-CTGC---TCCTCAAATGTCAATCACAGAGGCACCCAGG---GTCCCACCCCCTCAAGGCTCAGAACCCTAGAGTCCCGATTAGTGGCCGTCATCAAAGTACACGAGGTTTCCCAAGAATGATGAACACATGTCAGCAGGTCCTGATGGAGAGACAGACACCAGGCAGAAACTCTGATGGGCAGAAGGTA--CTGCAAGGGTG-AACCTGAAGCA------CGGGGCTTGGGCTTGATGC-TCCTGATGCAGTCACCAGGC s bosTau2.chr26 11242807 582 - 35715000 GAATTACAAAGATTACTGAAGCTCACAGACTATCTGCTGAAAGGAGGGAGTGAATTTCAGGGTCAGGCCAAACCTCCAAGCCGAGCACGGAGCTTTCCCAGCGTGGGGTAGAGACTCACCTAGAAGGTTTAGAGGAGGAGGCGGGCTCCGAGGAGGAGAGGGCCG------------CCCCAGCTAGGAGCCCAGA--------------------------CTCCCCGTGGGTGGGAGTTGGTAGGAGTCCTATGGACTGGGAAGTTTTGCATCTTCCACTTCT--ACTGTTGTCAGTCCTGTTGGATACTCCCATCGCCCCAGGAAAGTCTGGCCTGGCTGTGCAGGAACAAGTGGCA----ACAGGGCCGTACAAGCCTGTGTATCTTCTGCCCTCACTCCCA---CCCTTCAGGGGTGCCCCAGCCCCTCAACCT------CCCCAGAGT-ACAAGCGGTGACCATCCCTAAGGCGCAC-AGAGGTCTCAAGGATGATGAACAAGGGCCAG-AGAACAACCTGGAGAGGTAGACGGGAGAC--AAACCTTGAGCAGCCCCATGTGTCCTGGATGGAGGTAACTCAAAGCAGGAAGGCTGAGATTGGGCTCCACCTATCCTGTTGCTGGGCCCAGGC a score=10599 s mm7.chr19_random 578726 370 + 2598976 AGAGGGAATTGTCATTGTATCCAGGAGAGGA-GTCAGAGCCAGGGAAT--GGAATGGCAAGAACATTATTTCAGAGATCAGGTAAAGGAAGTTCCGCCCC-TGGAGATGAGATCTGACAGGCCAATAAAGGCCTCTTAATACCTCTGATCCCCATGTGCCTTTGATATCATGTCGAATTTTCTGCTTGAGTGAGAGGCTCTGCCAATTCGAAGAGATCAGCAGTTTTCATCCACAGTAGAGGACGCCTGGCTTCCCTACTGC-----------AAGTCT---------CTGGAAGCAGTCT---------CATACAAAATGAGCA--GTCCCTGTGTGGCC--------CTTTAATGTCACAGAATGGGCACCCCCCCCCCAACTCTCCTGAGAGTAGAGCCTAGAAGGCAAG s bosTau2.chr26 11245110 400 - 35715000 AGAGAGAATCGCTACTGTGTCCAGGAAAAGCCAACAGAGCTTGGGCCCCAGGAAT---CCGAAAGTTACTACAGATATCAGATAAACGAGGTTCCGCCCTGCAGAGACCAGACTTGACAGGCCCATAAAGGCGGCCTAATACC-CTGAGCCC-ATGTGCTTTTGATATCATGTCTCATTTTCTGCATGAATGAGAGACTCAGCCAAGG-GAAGAAATCTTAAGTTTTCATTTACAGCTCAGGAAGCCTGGCTCGCCTGCCGTGGGCAACCATGAGGGCTGTCGCAGAGCTGGTGGCCATCTGGCCTGGCACACACGGAAAGAGCAGGGGTCCTCAGTGGCTGCTCAGTAGTTTAATGGGA---AATGGAAACTCCCACGCC----CTCCCGAGGCTGAGTCCTGACAAACAAG a score=15590 s mm7.chr19_random 580270 740 + 2598976 CCTTAAGTGTGGCCATCTCCCAGATacacacacacaca---------cacacacacacacacacacacacacacacacacacacacatacTTCTGCAGTATCTATGGTGAGCATACCCCACATACCCAGGATGTCAGAGATACTTGGCAAGTGGTTGAGTAATTGCCAAATGAAT-----CCATGTTTTAAAAACTCCAAGGAGTTGACCTTAGACAATTTTAACAGGATGTGCATGACCCATTACTGAGGCTCCA--GTAGGGG-------TTGG--AGGTAGTAATCATACTTAGCCCTCATTCAAGCAACTCATGAAGAAAGAACAAGGAGGATAATGAT-----GTCTCAGA------------------CTTG----------------------GCATCATCCCCTCCC--------------------------------ACCCTG------CTCACCTTCTATCACCCTCCCCATCCATTGCAG--------TCACTCCATGGTGAGCCCTCTTACCA---------TGAAACAAGACTGAAGACCTCTCCCAACAACTGAACATATTCACCTAAGTTTCTTTTCACCTTGGATTTTTCATGAAACCAAATGGCAGTTCCCAAAGGTGAAAACCTGTGATTCTTTC---CAAATCCCTGTGAAGCGAAAATTGCTAGTTTCACACAGCTGTCCTGCTGCTGACTGTTATTAT-----------GATT---GCAACTCGATCAggaagacaggagacctgggttctggctccagcAGACCTAAGATA-TCCCACAGCCAGACTTGCCCAGGCTAGGA--AAAAGAGAAGCCTTCTGTAGGTCCCAACCATCATGTCTATCATTATCATTCCTGTGAAT s bosTau2.chr26 11248266 842 - 35715000 CCTTCAGCTTCTCCATCTTCC---TCCTCTCCCCCACAAAGCTTGTGCACAAGTGAGTGcacgcacacacacacacacacacacacaTGCTTGCCCAGTATCTATTGTGACTGCAC---ACATA-----------AGATACACAAGGGAAACGG---GGTAATAGCTGAACGAATGAACTCTACGTGTTTAAAACCCTAAGGAGGC--------ACAA-----GCCAGATCCATGTGGTTAGTCACTGACACTTGAATGTAGCGGACCTTTATAAGCTAGATGATAAATAAACCTCACTCTTTCCCAGAAAACCCTGGGCAAGACGTCAAAGAAAATAATAATCATTTGTCCTAAAGTCCTGTGTTCCTCTTTGCTTGCCCAGGGATTGGTGCCACTCCTGCGCCACCCCTTTCCCAGAGAGGCCCTTGGAAAGACAGGGATCACACAACCTGGGTTTCCCCGCTTCCCCTCATTTTCACCAACCTCCACTGGTCTGGGTCCACACCACAGGGGACCCTCTCACCAGCGCTGCCATTAATCCAG----------TTCATGAAAAAGTTTAAATGTTCTTTTATATTTCTTTTCACCTTGAATGTTTCGTGAAACCAAATGGCGGTTTCCAAAGGTGAAAAACTGTTATTTTCCAAGGCAAATTCCTGTGAAGTGAAAATTGCTAGCTTCACACAGCTCTACCACTGATGACTATTATTACTGTGGGTGCTAGATTAACACAATTTGATCAGGAAAAAGTAAAACCTGGGTTATATTCCTAGCAGGCCTTAAATATTTCCATGGCCAGACTTTCACAGACCAAGAGTGAGCGGGAGGTCTTCCCAAGGCTCTGGTCACCAGGCCCACCATCATCTGTCCTGTGGGT a score=2852 s mm7.chr19_random 583460 104 + 2598976 ATGGCCAAGCTCTAGACCATGCCTCTTGTTCCCCTAAGGACAGGGACACTTTGGATGCTAGTCACCTCCCATGTGAAGAACA-GGGCTCTGATTTTCTGAAGAGA s bosTau2.chr26 11249136 87 - 35715000 ACAGTCAAACTCGAGAACATGCCTCTTATCCTCCTGAAGACAGGGA-----TGGA-------------CTCTGTAAAGAGCACTAACTCAGACCCTCTGAGAGGA a score=5064 s mm7.chr19_random 585834 125 + 2598976 GGTATCTCACCCATGAGCTATGAATAATGCCAAGGAGTAATTCATGTCTTTGGTGACAAGCAGTGGAGAACTGTGTGAGCCTGTTTCCCTGGGTGCCCACCTGTCAACGGCAAAGACGAGGATGA s bosTau2.chr26 11250266 121 - 35715000 GGTGTCTCATCTAGGGGTCCTGCACAGCACTGAGAAGTGATAGATGTCTTCAGTGACAAGCCGTGG----CTGTTTCTGCATACTTTCCTGGGTGTCTGGCTGTCAGCAGCCAAGATGGAGATGA a score=56732 s mm7.chr19_random 689875 729 + 2598976 gaggaggaggaggaggaaggagaggaAGGACAGAGGCCATGTAGGGACCGATaggaggaagcagaggagaagaggagtcgaggaggggtgaggaagaaaggctggagggcgaggaagaggag----------gagggtaagaggaggaag---aagaggaggacga---ggaggaAGGCT--CGGAGGCGGTGGCGGCGGGTGACAGGTGCCTTGGTGGTGGCGGCCCTCGGCAGACATGATTGCCGCGGTGGCTGCGCGCCGGAGCGTGACTTTACAACTAATCCTGTTTGTAAGTTATTATTTATCTTCAGGAAAGTTTGTCAAACTTGGGCTTTGATTTTTCGCCCTGATTTCCCTCTTGTGGCGCGCTCTCGCACGCGCTCCCATATAATTTATGACTGCCTCTGGTCCTGATGACAGATTATTAAAAGTAGAATTAGTTTTTCGCGCAGAATTTTTCCACTGGGAATTGGGAAGGCAGCGCTCTCCGCGGAAGGTCTCCGGCGAGGTCTCCATTACTAATAGAAGTTTTTTGATGGGGTGAGGAGACTAATGATTTGAATTTACTGTGGCAGCAGTCACGTGGGCGGGAAGGCATCAGCCGAAGAGACAAGAGGTTAACTTTCTCCCTGTGGAGAGGTTTATTGGATTGTTTAGCAGCAGAAGGATAATGTTTTTGTCATAGACTGCTGGTGCCACGCTGCAGTGCGGTGGCCGCCAGCGCCCAGGATAGGGGAGAGGAGAG s bosTau2.chr26 13138969 730 + 35715000 GGGGAGGAGGGGAGAGAAGGCTGGGACggagggagacaa--------------ggaggaagaagaacagggg-gatgatgagaaggagggaagaggaa-ggttggagggcgaggaagaggagcgggggggaggagggtgaagggaggaaggcgaggaggaggacgatggggaggaAGGCTGCTGGCTGCGGCGGCGGCCGGTGACAGGTGCCTCGGCGGTGGCGGCCCTCGGCAGACGTGATTGCCGCCGTGGCTGCGCGCCGGAGCGTGACTTTACAACTAATCCTGTTTGTAAGTTATTATTTATCTTCAGGAAAGTTTGTCAAACTTGGGCTTTGATTTTTCGCCCTGATTTCCCTCTTGTGGCGCGCTCTCGCACGCGCTCCCATATAATTTATGACTGCCTCTGGTCCTGATGACAGATTATTAAAAGTAGAATTAGTTTTTCGCGCAGAATTTTTCCACTGGGAATTGGGAAGGCAGCGCTCTCCGCGGAAGGTCTCCGGCGAGGTCTCCATTACTAATAGAAGTTTTTTGATGGGGTGAGGAGACTAATGATTTGAATTTACTGTGGCAGCAGTCACGTGGGCGGGAAGGCATCAGCCGAAGAGACAAGAGGTTAACTTTCTCCCTGTGGAGAGGTTTATTGGATTGTTTAGCAGCAGAAGGATAATGTTTTTGTCATAGACTGCTGGTGCCGCGCTGCAGTGCGGTGGCCGCCAGCG-CCgggagaggggagagagggg a score=4061 s mm7.chr19_random 741694 210 + 2598976 ctttATT--------AACAACTTACTTCAGATGTCTTAATTAACCCTACTATTTTGTTTCAATGTGCA-TGGATCATTTAACTAATTTT-----TGTTGAGTGTTTAAGTTAATCT--TCCCATCATCTTACACACTGTAGGAGTGAATATCCATATAGGTGCACTCTTTCTACCCAGCCAGTTCTttttattctttttcctaaaacagggaggatctcactgtgt s bosTau2.scaffold3559 11776 192 - 79695 CTTTATTGCCAATTGAACAACTTATTCTAGACATTTTAATAAATGATA--GTCTTGTTTCAATGAACAATGGATCGTTTAACTAGTCCTGTCATTATTGGGCTTTGAGGTTGTTTTCATTTCCCCATGTTAGACATTGTTGCAATGACTATCCTTATC----CATCCTTTACACCTAACCATTTCT------------------------GAAGA----AATGTGT a score=6368 s mm7.chr19_random 742017 320 + 2598976 TTGTAGAAGTATTTATAAGGTTAACATCAAATTATGGCCACTTTCAAAATAGTCTACAGCCTTT---CCCAATTGTGAAAACACTAACTTTGTGTCCGTTTTAAACTTTCCCAACCTAACCAGCA-------------------AGCATATCACCGATGACTAGTAAAGTGT--GACATTTTCATATCTGTTGAGTGCTTTT-----TGATCCTTATTTGCTCGATTGTTTTAGAAGTGAAGTT-------GGTCCCTCTTGCAATGAGGATCTTATACAAATGTTTTATTTACTGAGGGCTCTGCAGAAGGG------------GAAATGAGGCAGGATGACAGAGGGAAGGTTGTGGTCTCAGGAG s bosTau2.scaffold3559 11968 339 - 79695 TTATAGAAGTATCTATAAGGTTGGTATCAAATTAT-----------------CCCTTAGCCTTTGCCCACAATCAAGAAAATACTCATTTTATAATCTTTT---ATTTTTTCAAACCAATCAGCAATGGAAAGATGTATTTTTGATGATTTTCCCAATTACTAACAAAACATTCAGCATCTTCAGGTTTGTTAAGCATTTTTCTGGGTCAGTCTTCTTTGCTCAATTTTCTAttaagtcaggttccctggaagtggcacttgaaatgaggattct-------tgtgtgatttcttgagagtgctctataagggactgagggaaacaggatagggcagga--gaagaggcacggaggtagtttcagaag a score=2708 s mm7.chr19_random 742982 142 + 2598976 ACATTTCTAACTTCTAACATAGTTTTATAGAAATCAATTGAC-----------ATTTTCCAGTTTCAATAATCATACTTGAGTCTATTTCAATCTAACAT--CTTTTTAAAATCTACATTTTGTCTTTTCACTTGttttt------tgttttagagatggg s bosTau2.scaffold3559 12682 154 - 79695 ACTTTTCTAAC----ACTACATTTTCATGGAGACAAACTGATTAAGCTTTTCTATTTTCTGGCTTTGGTGACTGTGTTTAGGTCTTTTGCAATCTAATCTTATTTTTTAAAAATAACTCTTTA---ATCCACTTGAATTTATGATGTGTCCTGGGTATGAG a score=3072 s mm7.chr19_random 744388 79 + 2598976 TCCTTAG-ATCAATATGGCATAAATGCAGATATTT---ACTGAAATGGCTA--TCTACTCAGTCTAATGAACTTGTTATTGAAAA s bosTau2.scaffold3559 19497 85 - 79695 TTCTTAGTATCAATATAGCATAAATGCACATACTTGTAAAAAAAAAGGCTACTTCTATTTAACATAATGATCCCACTATTAAAAA a score=27405 s mm7.chr19_random 744607 1614 + 2598976 tatataAAATTTTAAATTTGAGCCAAATGCTTTACA-----CCTTATAGCAACTAGGAAAATCACTATTAGCTATTGAGGGATTTCTAACTAAAGGGAGGACTATATCGTAAGGACAATTTGAAGGCAGGAGGGAGCGACTCGAGGGGACAAGTA-ACTCTTATGAGCA---TCCCTCTGCTTTTACAAGT------GCAGAAGTCCTTTAGGAAGGTTTTAACTCAAGCAGTAAAAAAAGAG---CTTAAAAAGTAA--TCAGTTGGCTAAAGTCACCCCCATAACAGGGCTTAA---GTCTTCAAAATAACTACCTTTTTTGGATAGTAAAATTTAAAAAT------CCATATGTACCGAGTA-----GAAAAACGTTAATTT--------------ATTAGTTTTCAATGTCTTACAATACTGAGACATCTTATTTCAGTGTACCTACTGTTATTCATTATTCACATGAAGGATAAAATA----------GTTTTTCTCTTAAAGTATATCTAAATTAAT-TAAGCTGTTAGTCTTTAA---AAAATGCTTCACTGGGTTTTATTTGCTGTTTTAATGGTCTGAATATAAAGTTGTTTTTATAGACTGTTGGTTTCTAGTTT--AATGAAAATATCAACTCAGCAGAGT------TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGACTCAGGACTCGTCTCAGCCCTCACATTTAGCTTTCTTGCACACTGGAAGAGATTCATCATCTGCTTCTGATGGCCGTGGTTTCTTCACTGTAGAAATAATTCCAAAAGCAGTTTTTCTAGTTTCTGTAAA------ATAGAAACCACATTGAATAAAGATAGAA---------------------------------------CAGTT------------TTACTTGTttctgtttcttgagacaggatctcaccaa--gtagc---ccaggctggcct--------tgaactcc----------------------------------ttacgcggtccagccaact----------------ctgaccctcctgctttag-cctcctaagggcagag---------atga------------------------caggtgttg--gtttagccagcattacccCATTTTCTTTGG-----------------CCTATAGCCCGGTAAACAGGAAAACCACAGAGAGCTCTCACGGGTGCAGATGCCATTTATGG-----------------------------------TCAGTATTTTAC---CAGCTAGCTCGTTCCTAAGGGTTTCCTCTTA---GATAAACTGCAGAGCAGGGATTCTCCATTGCTCTCTCC---ATGCCATCTGATGCAGTCAGAA--CCAGCCATAAGCATTGGTCTAGCATCTGCTTTATGTATGGTAAAAAGATCATAAGAGAAATCCCAGGCC--CGGGTGCAGGAGTCGCCTGCACTGCTCCCACAGCAGGGGCTGTGGTGAGCTTACTCTACAGCACACACCATCA-----------CCCTCACTAGGCTACCAATGT------------------ACAATGTA---CCAACGTCCAGCA-------GTCATCTAACATGTG-------------TGCTGGCAGAACACAGAATCAAGCTCACGTTTACCAATCCTTTATGTA-TGCTAATAATGAAGGGAAAAAGAGGGATTGCTTTGTATGCTCCGGTCAGTTTGGCAGTAGAGTTGAACTTCAACTTAG---ATTTGTTTTAAGTACATATTAACAGGACAGGCAC--TGTCATATGCAGTATAT----AAAATCCTTAGCAGTGGTTTTTAAATATTCAAAATGCTGGGTAAGTACATTACAAATAGACATATTA---------GAATGAAGG-CACACAGGACA-ATCACCGCCTGATGAACTAAGGA s bosTau2.scaffold3559 19586 1932 - 79695 TATTTACAAATTTGG--TTGAGTCTAGTACTTTGAGATTTTCACTATAGTT-TTATAAAAATCAGTATTAGGTTTTCAGGGGCTTCCAACTCAGAGGAATCCTATTT--TAAGGACACCATGGAGGTAAGAAGCAGCAAAGGAAGAGGCCAAGTGTGATTTTATGTGCACTTTCCCTCT-CCTCCACAAATTTTATAGCAATTGCCCTTAGAAAGGACTTGGACTTCATGAACATAATGAGAGAGGCTTAAAAGAAAAGATCAACTAA--AAAGTCAATCCTTTAGCAAAGTTTTAATAGTCCTCAAAATAATCAC--TTTTTGAGCAGTAAAACTAAAAAATAGTAAGTCATATATACCAAGTGAAGCTGAAAAGCATGAACTTCAAAATGAACAAGAAAGATTTTTAAAGAGTCTCTTGTATTGAAAGATCTTAC----GTATACCTGCCATTTATCACT--TAATGCAAAGGATAAACAAACTTGTCTTTGTTTTTCTCCTAAAATATATTTAAATTAATGTATGGGGACAGTCTTTTTTTTCTAATGTTTTACTAGGTTTT----GTTATTTTAATGGCTTGAATATAAGATTGCTTTTATAGACTAGTGACATCTGGCTCCAAGTGAAAACAGTGAATCATACGGGGGTTCCGTTTCTGTTCAGAGTGGCTGATGGACTCTGAAAGGGGAGTG----TTGACTGAGATGGACGGTTCTTTTCAGCTCTCACACTTGGCTTTTTTGCAGGCTGGAAGAGAATCATCATCTGCTTCTGATGTCCGAGGTTTCTTCACCGTGGAAATAATTCCAAAAGCAGTTTTTCTAGTTTCTATAAATCAAACAGGGAAACCAAAGTGCTTAAAGTTAAGATATGATTTAAAGAGGTGGTATAACAAGCATCCCCATGTTCAGTTCAGTTCagtcactcagtcgtgtccgactctt----tgcgaccccatgaactgcagcacgccaggcctccctgcccatcaccaactcctggaatttacccaaattcatgtccgtcaagtcggtgatgtcatccagccatctcatcctctgtcgtccccttctcctcctgccccatccctcccagcatcagagtcttttccaatgagtcaactcttcctatgaggtggccaaagtactggagttt---cagctttagcatctttccttccgaagaaatcccCATGTCACTTACAGCATGAGTAAATGATAAACCTGTATGAACTGCTGTGAGTGCTGATGCCATTTACTGCGATCACCTTTACCTGCCCCTAGCTTATACAAATATCAGTATATTATTAACATCTAGTTCATTCCAAAGGGACTACCCTCAAGGGTAAAATTACAGGGCAAGTTATCTCCAACGGTCTGTCTCTAATGGCATCTCATGTAGCCAGAAACCAAGTTTCAGAGGTTGGGGCAGCACATGCGTAAAGTGTGGTAGAGATGG-ATGAG-------CCAGGACAGCAAGTCCAACAGTCAGCCGTCCTGAT-CCATGGTGGTGTGTGTGCTCACTTCATTTTATGGTACAGACCATTCACTAtctgtgtccctcactagatcatgagtgtctgtctgaagaatccatcatattatatggccaacatacagcaatgcctggttatttaacaaatgtttaagaaatacttgttgagtgaataaaGAATAATACACATGGTTATTGATCTCTTTTGTGTTGTTGACAATGGACAAAGAAGAATGGAAATTATTAGATGTTTAGGTCAGGCTGGCAGCAGAGTTCAACTTCAGTCTAGCTAACTTCTGCTAAAAATGTACTAAGGGGCCAGGCACTGTGTTATCTACAGAGGATTCTGAGAAGGCTAAACAGTGCTTCTT-TCTACCCATACTGAC-----AGCACATCAGGGGCAAATATAATAGTATAGTAGGAATGGAGACCCCACAAGAAGTAACCCTGCCTGGAGGAATCAGGA a score=5428 s mm7.chr19_random 747877 352 + 2598976 CAGCAGTCCTCTGATAGGGTCATTAAGGACTTCAACCCAGAGTCCGCCAAGGATATGAGA-CAACACAAACACAAACACAAACGAAGGGCAGCTCACCTGCTCACAGTGGCAGACA--------------GACTTAGCCTGCCTGAGACCTGCACCCAAG--AAGTCTCAATTAACTGTTTTGTCCTGTACAGTCCCTTGTCTCTCTTTTCTGCTGCTTAATCCAAACACCAGGAGA-AGAAGAAGAAAGC---TACAACTAGTTGTTATTGACTTCCGAGGCTGCTGGTCAGTAAACTTACAACTAAATGATAACAAAACACCAGGCTAAATTATAATAGCACTTTTGATTACATTTTTCTAAGGGAAAATT s bosTau2.scaffold3559 24706 344 - 79695 CAGCAACCCTCTGG--GGGTCGTTAAAGATTTCAGCCCAGAGTCAGCCGAGGACACCAGACCAACAGAAACATAACCAACAATGC----CAGCTGCCCTG-GCACTGAGAGAGACACTTTAATTTTACAGTTCTTAGCCTAAATGGAAAAAGCATTTGAGAAAAGACTCATTTAACT--------CTAAACTTTTACTCTTCCCCCCTTTT--CTACTTCACCCTTCATCCAGAAAACAAAAGGATAAAGCACTTTAAGCCTGATGTAATTTGTTTTTGAAATTCTTAGTTGATAGACTTATAGTT--------TTAAAACTCTTGTTAAAGTT----TAATATACTAAATTCAAATTTCCTAAAAGAAAATT a score=36623 s mm7.chr19_random 748427 1635 + 2598976 AGAGGATACAAGTTTGCCACGTCATATGGTCCTCTTATTTCCAAAGGCTAAAATGAGAAAAATAGAAAATAAA-ATGAGATATGAGATGTTATTAACATCTTAAT-----TATTTATAATAAGTACAAC---TAAGTATCCAAAGATAAGTAAAT----TTCATAAATTAAGATCCTTATAATTGTGATAAGttt---------ttaaaaatatataataaaCCATATAAAGGGTTGTTTA-CAAGGTAAAGGGAAAAATAAAATCACTTTATTCTAGTTAATTCACAAATACAAACATGCATAGGCAAAACCCGAAGGC--AAAATCAATGGGATACAT-----------------TTCGCAATTACCATCGGCAAAC--AGTTACAAGCACTAAGAGGCAGT------TCATCTCACTGTCTTGTCAGGTGTTCTAAAAGTGTAGCCAAGCTTTGTAACT------GCTGGGACAAAGTATTCCAT-CTATGCTTACCCTTTCTGCAGCACTGGACAGAATTACATTCTATAAAACAGAAAGTGAGCAATATTAATCTTAGATAATTA-ATAACATAATTGAAGAATTGTATAGAACAAATGATCAGCAACTCTGTCTAACATTTAAGGCTGAAATACCAAGTTCTATTTTTAAAAGATAAGGTAAACAACGAATGAGAAAGCATCGAAAGCTCTCA-------CTCAAGGCAGCCAATTTAAAAAAAG---CAGAATAAACTTTGTAAGTAAATCTTAGTGAGGACGAATTA------AAAGCT---------------GTAACTTTAATTCA-CTCAGAGATAATCAACTATTA-TCTACAGA--AGTCTTTTCATTGTGGCAAACTACAAATCCCTTA-TCAAAACTAGAGGCTTTCGGCACATCTTTCCT-CCCTATCTTACTCCGCCCTTGGGAGGTTTTAC-------AAGATCTCGGAAAGCTCATTGAAACTGAAGAATTTAGTGTT-----TTGAAAATTTTCTGCTTAAGGCAAGGAATCAGT-TGACAGCACGGACACACTACTAA---ACTGTCAGAAGCAGAAAGCATCCTCTGGGC-TGGAACTATACCTTTCCTTTGCAGATCTGCATCAAATTGAGGGCATTGGAGATTGTGTACCTTCTCATCGTTGCATCTCTGATAGCAGGACCATAGACAAGTTCAAAGCCCAGGCCTCGCTCAATTGCCTTTACCAGAAATAAAGAAGACAAAGTATAAACCGTCAAAGACAA-GTACA-----TTACCTACTTCCCTCTGAAGTCTCTTTCCACCTCCCTTCTC------CCCCTCTGTGCATGTCTCCTACATGGCAAGGGACTGGCTTAAACAAAGGCAGGCCCACAGCTCTGCACCCCTATCCAAAGTGAGCAAACAGACATGAAGGTCTACTTCAT-GACAGAGCTTATGTCAGT--TTGGGAAGCTACCTACACAAACAGGACCTGCAGAGGCAGAGACAGCCAAGTGTGTGCAGTGTGCACGTGCA-CAGGGCTACTGCTC---ACCTGGTCCGAAGAAAAGGATGTGTGTGCTTCCC-TATGCAGGGAA-----TCTGAGCCAACAGAGAGCCAAGCAACTTGACCCAGGAATGAAAGAAAGGAGATGAAGATCTGAAGGGCCGGAGGAGCGGGAGGGGAACCTCACAGCTACGTCATTTACTACACACA-GATGAATAACTGAACAATGACGGCCATGGCTAACAGAATGCTATGTGGGAAGAACAGTGCT s bosTau2.scaffold3559 25070 1671 - 79695 AAAGGATACAAGTTTGCCACATCGTATGGGCCTCTTATTTCTAAAGGCTAAAATAAAATGAACAAAAAATAGATATGAGAAA--AGTTATTCATTACATTTCAATGACTTCATCTGCAGTAAATAGGATGCTTAAGTATCTAAAAATAAGGAAGTCAACTGCATAAATTTAAGTCGTTATAATTTTGATGGGTTTCTTACATTTTTGAAAATATAAAA-GATCCTTGAAAAGCATTTTACAACAATATGAAGGAAAGACTA-------TTTAT----------------------------ATAAACAAAATTTGAAGCCCCAAAAGAATGGGGATAAATAGGGATAAAATTGCTCTTCAGCAATTACAATGAGCAAATGAAGTTAAAA--ATGAAAACACAACCTTTTATTACATTACTATTTTAATTTCTACCCTAGAAACCT--TTTAGTTTTAAAACTTGAAAAGTGAAAACAAAGTACTTAATGCCAGACTTACCCTTTCTGCAGCACTAGATATAATTACATTCTACAAAACAGAAAGTAATCAACATTAATCTTAGATAAATGTGGGAAAAAACTGAAGAGTCTTACAATACAATTAACCAGCAA-----TCAAATTTTTAA--CATAAACACCAACTTCTTCTT----AAGATAAGGTACATAATTAAAGTGATGGA--TGAAAGACCTCATGTCAAACTAAAAGCAGCC----TAAAATAAGAAACAGAACAGGCCTTCCCAACAGATCTTAGGAAAGATGAATCAGTTTAAAAAACTAGTTGAAAAGGGCATGTAACCTTAATTCAACTCAATGATGACAAATAATTGCTCTCCAGACTATTCTTTCACAGGAGGTAAATGGCCAATTCTTTACTGAAAGATAAAGGCTTTCAACACATCTTCCCCACTTTGTGTTATTTTTCCCTAGAGCATTTTTCTTTCTCTTAAGACCT-GCAGAGCCTGTTGAAATGGTAGAAGTTGTTCTTGGGCCTTGAGAACTTTTTGCT-----CTAAGGATCAGCAGGATAACCCCAGTATATTAATAATAAACAATCAGATTTGAAAACCATCCTAAAATTATGGAACCATACCTTTCCTTTGCAGACCTGCATCAAATTGAGGGCGTTGGAAATTGTGTACCTTCTCATCGTAGAGTCTTTGATAGCAGGGCTATAGAGAAGTTCAAAGCCCACTCCTCGGTCAATTGCCTTCATGGGAAACGAAG------AAGTGAAAACTGTTAAGGCTAACACACACTGTCTTACTTTATTTTCACTGAACTTCCCTCTCACCTCCTTCCTCACCCTGTCCCTCCTAGCCTAACTCCTGCATGTCCAGGTATAGCTTTGAAAAAAGGCATATTTGTGCCCGGATGGCACCATCCATGGGAGAAAAAAAGACCTTTGGCTCTATTTGGTCAACAGAGTTTATCTGAGCTGTGGGGAAGCTGACT---------TGATATAAAGAGCCGAGGAGAGCAACGTCCCAGTGGTGTG-----GCAGAAGGGCTACTACTCCATGAACGGTCAAAAGGAAATCGCAGACGTGTTCCCTACATGCAGGGTAGACTGTCTGCAAATGCAGTAAACCAACCAAGTTGATCCAAGAATGAAGAACTCAA---AAACATCCTAAGAACATGAGTAGAAGGCG-------TCTAGGGTAAGTGATTTAGTGTGAATATGCTGAAGGAAGAAACACAAACAGCCAAG-------AAGtgctatgtgccaggcactgtgct a score=32762 s mm7.chr19_random 750618 1620 + 2598976 GAGGCCACGC-ATGATACCGTTCACTGTGAAATATCTA--------GGAACTGGGATGAACTTGGTGAAG-GAAATCCGAAGGTAAAGAAAA---------------ACATTGCTAGCTGACTCCTCAGCTATGTCTTTTGCCAAAATGA---ATTAGACACAGGAGCTCAGTT--------CACATTTCCCTACTCTTCTGGCTGCAGACGTAAACCACTGGGCAGTGGGA----GGATGGCAGGAAGAAAGGATGTGAGCAATATG--GCACTGGATGATCATATCCCTGGGT------GCTTCTAGGTGAGTGAATTTAAACTTTTCAACTTGTATGGGAATTACAGGAAAAATAAAAACTCCCTTTGAGAGAGAGGAATGGAGAAAACAGGATAGAAATGCCGGCTTATTTTCTTTCACATA---------TGATTCTGGTCTTGGTACATTAATCAGGTTCACTTTAAAACTGCTAAGAAAACTCTTGAGAAAGAAATTAAAGATAATCTTGTATTGAAGGCTGTTGAGTATTTCTTTCATAAAACTTTACC-----ATTTTAGATGAATAAAAATACAG--TCATTACCTGGTCTCCTGTTCCTGAGAGCATTTTTATGTAAATTGCTGAAAGCTCATCATGTGATTGTTCATAATAATGTCTTCACAGAGAATGACAGTGCCTGCCTGATTGGCTTTTGTTCTCATGTCTGAACAGAAGTGCCTGAATAGGCAGATGATGAGGGTTTTTTTCTTTTAAATTTTTTTTCCTTCTTCTAAGAAATAACAGTCACAATGATGTC----ACCAAGGACA-GCATGTGACGCTTGGATCAGGAGATACTAGTAATAAAATTCCATGTATTAAAAACTTAAGCTAAGCTTTTGAGAAGGA----AGAATGGAAACTGATAGTTTATT-CCAAAGTAGCATGCTGACAGCTTG------CCCTAAGAAGAAGGGCCTCCGCTGAACT--CAGGATAGACAGCCTTCCAGCATATCATTC---ATTCAGGTCTCATCATCTCCCAATTCACTGACCAAAGCCACATAAGGA---AACAGTGAGTCCCCCTTGCATCTGCTGGTACTGCCTTGCCCCCCCACCACTGCTGTAATCACTTCCATTTATTTCTTCCACGTTCTTCC--AGTTTCGTCACATAAATATAAACAACTGTGAATACGTGTCATGTTTTCTTTTTTCTAACTAAAACGTGGC---TTATCTTGC----CTGATTTGAAGGCCTTTCCATATCAGCTTGTAAGTTCCGTTTTCTTTTATAGCTGCCTAGTACTT----ATGGAGGTGTAACAGGCACAGTGTTTAG-AAAGCCTTTACTAACAGACACGGGCTGTTTCAAATTATCAGCAGGATAAACACTAGAGTGGGATGGCTGGGTACtgtgagctgaactgtgtccccatccataacagatatgttccattgctaacctgaagtatctcagactgtaatgttcactagggatagggtcagtgtaggtgtga--tcaaatgagg----------------------------------tgaCTGGTGCTTTTATACGATAGT-----CAGGTACACAAAGGGAAACATGTTTACAACAAAGACAGAGAATGGCGCTA-----CTGTG---------------------GTCAACAGATCACTACTAGCCAGGACGACTCACA-TAAAGGCTCTTTGTAGTGTCTGGAGAAAGCACAGCCTGCTCACACCTTGATTTCAGCCATGCTGGCCTTGGAA s bosTau2.scaffold3559 28477 1699 - 79695 GAGGTCATATGATAATGCTGTTCACTATGGATTATCCACCATAAAAGAAACCAGGGTTAACTTGGCAAATTGAAATTCACAGACAAACCAAATCATGTCTTTCAACCATATTCTCAACTATCCCCCTGGCTGTTTCTCTAACCAAAACTACTAATTAGCCAAAGAGGCTTACTTACATGTACTTCTTTTCCTCATCCCTCTAGCTGCTGAACTACAGTACAGGTCGGTAAGATGCAGAAGAGGAGAAATAGAAGATGCAGGTGACATACAGAACTAGGTGACCAGGTCCCAAAGTATTCTTGCTTCT-----------CCCCCACCTCCCGCCCC-CCTGGGGACCACAG-CAAAATAAAAACAACTTTTTTGGGCGTGGAGAGGGTTAAT--GGACATAATTATCCACTTAATTATTTTTTAAGAAAAAAGTTCTGATTCTGATCTTAGTACATTAATCAAATTCACTTTTAAAATGGAAAGAAAACTC-------AGAAACTGAAGATAACGTGCTACTGAAGGCTGT-GAACACTTCTTTCACAACACTTTATTTAAAAATTTTAGATAGATGAAA-TACAGACTCATTACCTGTGCTCCTGCTTCCAAGCCCATTTTAATGTAAATTGCCTTAAGCTCATCAACTGATTGTTCATAACAGCCTTGTCATAAGAAATGCCAGCGCGTGCTTGATTAGCTTTTGTTTCCATCTCTGACCAAAGGTTCTGGAATAAGCAGATA---------TTTCTCTACTAA-----------------TGAGAAGTA--AGTCATAACGATGCTACAAACCAAGAGCAGGTGTGTGACATGTGAA--GAGAGGTAGTGGTGGCACAATCCC-------AAGAACTAAAGCAAAGCTTAAGAGAAAGAAGAGAGAAAGAAAATAGGGGGCTGATTACTGGGACAATATACAGATTCCCTGTTTATTTCCTAAAAATTAGTTCCT-TACTGAATTGCAAAGGAGGACACTCTT--GGTGTATCATTCTTGAGACAGGTAACTCGTTCATACGATTCACTATC--AAGTAACACAAGAAAGCAACAAAGAGTCTTAATTGTCTCT-CTGCCCCTGTTTGCCCCACCCCCGTCTCCCATAATCACACTTATTCATTTCTTACGTCTTTTCCCAGAGTTTCTTCATACAAATATAAGCAAGTATGAACA-ACATC-TGTTTTCCTTTTT-TACCCCAAAGATAGCATACTACATTGCGGTTCTGACGTGAAGGGCTCTCCATGTCAGCTCCTACCTTCAGCACTGCTTTAGAGCTGC--AGTACTCCACGGCAGAGGTA----AGGCA---TGCTTAGCCAAGCCT---CTCATAGCTTTGAGTTGTTCCagtatatctgtagaataaatgctaaggtgggattgctgggtattacaggttgaattgtgtctc---ttatgaaggttatgtagaggtcctaatactcagtat-ttaggatgtaaccttatttggaaacagggtcactataaatgtaaattaaaatgaagttttactggaatagggcggactcctattccagtatgactggtgtccttacaagatgatgaccacaggaagacatagagacacacggtaaagac--aggcagaaatcagagctatgcagctgcaggccaacgaccaccaaagactgccagcaaatcacagaaagctaggaagagacaaagtaggatccccctactggtctcagagggagcataac---cccatgtcttgatttcagacttccagtctccagaa a score=12730 s mm7.chr19_random 752734 443 + 2598976 TTCTAGTTTTCTCTCTCTAATGAACAA------------ATGAATAGGGGCTTTTCTGCTTCCAGAACTGCTCTTTCTGCAG---GCTTCTATACCAAATGAAGACTAAATGTAATCTTGTGCAGCCTTTCTGTCCACACCGCCATCTAGCTTTTATTAAACAACACGTGCAAAATGTTCATACCAG----------AATCATAC----CATTAAATATTGTATATCC----CTCTTGTCAAATTTTTAAATTTTCCAGAATTCTTAAACTGAAAATGTCGGTAGGAATCATGTCAGAAATATCAAGCACTTAACAGCAACTTTTCTGTACTTCAAAGGAGAACTGGCGGGTGGCGGTGTCCTGGTGCCTACCTTACGGGTCACTCTCCTCATGCCACCCTAGCACCCTGCTTCTCTCACGCATATG-----TGCCTGCCCAACACTGATAACTAC------CTAATGGCTCACAACA--------------------TGCATCTTG s bosTau2.scaffold3559 32821 478 - 79695 TTCCAGTTT---CTCTTAAATGAAAAAGAGGTGAATGAAATTAACAGGGACTCTTCTGCTTCCTGACCAATTCACACCGCAGCCTACTTATACACTAGACAAAGACTAAAAATAAGGCTGCACAGCCTTCCC-TCCACTCCATCATCTAGTTTTTATTAAACAACATATGTAAAATGTTCACACCAGATTTTAAAAAAAGCAGACAGTGTGTTAAATACTGCATATCCGTCTCACTTGTCAAATTTTT--ACTTTTCAGAATTCTTACATTGAAAA---ATGTGGGAATGTGGCCAAAAATACCCATCAAAAAATAGT-ACCTTCCTGACCTTACAGATGGAACTGGAAGGTGG-GCTGTCCTGGGGCGTCTC------------CTCCTCATG---CCCCAGTGCCCGACTCCTCTCAC---TGTGGAGGCTGCCTGCTGAGCCCTGACAACAGCTAAGAGTTAATGGCTTGCAGGATTTGCTTGTGTTCCCTAAGTTGCACCTTG a score=12541 s mm7.chr19_random 753177 1189 + 2598976 GCCACGGGG-----------------------------GTTACATACTGTGCACTGCT---CATTCC-CATACTT---TTGACTATTACACGTCACTGTTTCTTCTCAGCCTAGGACACAAAACTATGCATAAGCTCATTCAGGCAAA-TTGTCTAGAAAATAGGTCTCCTAGTT-ATTAATGTGAAAATATTGTTAAATATATCAAAAAATATGCACAGTGGGCTGCACTATTTAA-------TTCTGGG-AATGCTGTTT---TGTGGAAAGCATTGGCAGTCTGAGGCTGATAAAAGAGTAGAGCCAACTTTT-AAGGCAGAGATTGCTTTTTGAAGACAGGAAAAATTAAATACATGAGGCCAGTAAGATGACCATAAACTTGGACCCTTTGTACCTAACGGTAG-CTAAG-TCCCAAGTTCTTGGGAGCTGCTCCCATGTGTGGACCACAGAGGTCATACCTGACAGGCAGGACGCGCACCTGTCTGAGGCCTGTG--AGGGAAGCTTGATGGCTTGGC--GGCCTTCA----------TTTGATAAGTGAGCTGCT-GCATACCATAGATTCCCCACTCCGTGGAGTGGTGACTGGG----------------------------TATTTAGAGGTGCCACCACCAGCCTG------------------------GTTGGGTTCAGGCTCAGCAGCATGCCA------------GAGAAGCTGTTGGATGGTTTTCTCTAT---------------ACATTTTGGGCACTTTTCAAAACCCATCTTATCA--------------TATACACTTAGGGTTAGAACATAAGTCATCTT-----------ACA-----------TTTTCCACACCAAACAGA-CAACTCACTCC-CCTCACTGTTGTCGCTAATCCTCAGGATCAAGCAGAAATTCCACAGGAG--AAAAGGGAGACAAAAGGGAAGAAGATAGGATTCTAC---TACAGGT-AGTAAGGAAACTGTCCACTTTGAAA----------------TAATAGTTGACTCCTGACATAATTAACCTGGGGTTCGGAAT---GCTTGCTAAATCTTTTTT------TTGGATAATAGTTTTTGATAAGATAACTGAGTTCTGGAAGTCACTATGCTAAAC----------AATACTTGTAGGTTTTGGCCAGCGAAGTAAATAGTTCCCAGAGGCACTGACCGCATAACTACCGGATCAGTTACTGGTGTGAGGTAATGCTATCTTTCTATCATGGAAATGGGGGTGGGGGTAGGGGCTGGAGCTGGGTGTGAGACTTAGAAGGCAATATGGCAGATAAAAGATGAAG-GTATAAGAAAAAGAGAAAACTATAGATTAGGATAATGAGGAAAAAGTCTATGTCAAGAGGAAGAAAA s bosTau2.scaffold3559 33477 1293 - 79695 GCCACTGGGTAGCTTAGCATTGTTGTGGGATGAGAGGAATTAAGTGCTGTGAACTGCTGTCCATTCCACGGACTTGGCCTTAGCATCACATGTCACTGTCTCCTCCCAACCAAGAACACAGTATTGTATGTGGGTTTACTCAGGCAAAGTCATCTAAAAAATGGCCTTCCTTGTTCATCAGGGTAAAGAGAACAGTAAAGAAGTTGAAA----------------------GTTTAAGAGCAACTTATGGGAAATGCCATTTACATGTAAACTGGAATGGCAAACTGGAGCTGGTAAGAAGCCTTGGCAAACTTCTGGAGACAAAGCCTGCTCC-----GAAGGGGAGGACC-AACACGTGAGGCCAGTAAGACTGTCACCACCTCAGGTACTCTGT---------TAGTCTGAGCTTTCAA---CATGGTAGCTA---------GGGCACATCGGAGGTCTCACCCAATGGAAATCAACCTGGTCTGTCCCAACCCTGGGTCTGAAGAGCTGTACAGCTTCTCCTTGCCTTCATTTGACCATGTTTGACAAGTGAGCTGTTAAAACAACATAGATTTCCAATTCTAAAATGTGATGATTTAGGGCCTTTTTTTAAAAGTGTTTACTCATTTATCTATAAGTACTGGCAAGAACGTGGGGAAACAATGATTTGAGCGTGTTGTTATACGTATGTTCAGTATATTCTCATTATTAATCAGCAAAGAGCTGTTTAATAGTTTTTCCTTTAAATATATAACTCTAAAATTTTGAATACTTTTCAAAATATTACTCTTGAATGCTTTACAGTAGCATACATTCAGGGGTAGAACATAAGCCATCTTCAACTTTTTCCACACAGGATTCAATTTTTCCATACCATACAGATCAATTTTCTCCTCTTTATCGTCTCTGCCTATTCTCAGCATCAAGC--CAGCTCCTTAGCAGCAGAGAGGGAAACAAAA-------------GATTCTCCAGAGACAAATGAATAGGGGAGTTACCTATCCTGAAAAAAACCCATAAATTTTTAATTTTCCAATTCTGACAGGGTT------GGGTATGTAATCTAGACTGTTAAACCTTTTTTTTCTCCTTCAACAGCACTTTTTGAGAATGGGAAACAGCTTCAGAAGACTCTGTTCTAAAATAGCATCCTGACTCTTCCCAGGATCCGGTTGCCAATGCAAATAGTTGACAGCTGTGCCAAACTTATAGCTCCC------------AATGTGAAGCAAT-CTCACTTTC-ATGATAGAA--------------------------------TAAGACTTATAAAAAGGTGTGACAGATGGAAGATAACGAGTAGAAGAAAATGAGAAAG-TATGTAGAAAGGTAACGA-GAAAGATTCTAT----AGAAGGAGACAA a score=2691 s mm7.chr19_random 754398 230 + 2598976 AGTTCTTC-TGGGAGCCAGCGCGCTTCAGTGCACACTGTCATCTCACTCA--------------------CCACTCCCTGCTGACTT-CACACCATTTCATTTTG----TATCTCAAGGACTTTCTGCGTCTTTACCTTTTCTTTTC-------------CATCTTAATA---------CTGACGTTTAAGTATCTCTCATTATTAAATATTGATTTGAGAAATATTTATCATACATTTTAGTTCCTAAGCTTTTCAAAATACATCTCAATAGTTAAC s bosTau2.scaffold3559 34808 256 - 79695 GGCTCTTTGTGTGAGCCGGCACACCTCGGTGCAGATTTTAACTGGGCACAGACTACGCCTGCTGTGCTTTCCATTCCCTGCCACCCCACTCCCCTTTCCAGTTTGCTGCTGCCATGAGAACCCTAT---TTTTTCCCTCCTCCTTTCTTGGCTTCTCTGTCTCCTTAATATGCAACATGCAGAC-TGTAAGTGTCCATTATTATTAGCTATCCGCTTAGGAAAT------------------TTCCTGAGGCCTTTCAAACACACCTTGGTAATTTAC a score=21661 s mm7.chr19_random 755050 1133 + 2598976 TAGATACTTTCTATTTTAAGCTTGCTTTCTTCTTCTTTTGGTCAGCTTAGAAAAGCCAAATTCTCTTTTCTAAAACTGCTCCAATTAC--CCAGGTTCTGGTT------CCCTAAGAATATAGGTTTCTTCTGTCCCTTTTCTTATCGAAGACACAAGTTTCTACAGATCCAAGTTCAGAACACAAAGAGCAATACTTACCACATTAACAGGGGGTCTTTTGAAGTAAAATGGTAATTTCTCTGTTACAGTTATACAGACTAAATCCACATCTAAATGTGTACAAGCAACCTGTCAAGGAGAAAAAATAGATTAACAGAAAAGTACCACTTAC-----TGGAATGAGAGCCATGGTCATACCAAATACACAGAAACATACACAGA-ATGTCTGACTCTGAAGATGTCATGATTGCTCTGGGTTGAACTGTAATAAACCTATTATAAGGCCAGCTGCTTACTATTCTTTCAGGCGTGGCTTGGATGGTTTAAT---------------------------------------TCTCAAAAGTCAGGGCCTGAAGGCCCCCTAATTCCAAGTT-TTTATATATGAATGAGTTGGTCAGTTAGGGTCAGGATCTAGAATATTACATTGAATCATTCCAGAGAGCAGAAGGTAACTGCTCTAAAATCCGAGGAATTGGCAGGCCAGGATGAATGCATGCATAGTGCA-TTTCTGTGCAAA----CCATTCTCCTGAGCATTTTTCTGTCAGGAATTAG-CCAGGCTTGTAGTTCCAACCAGACTACTCTGTGGCTAAGAAATAGCCCGGCACAGCTGATGGCCTTTTCTTCATACACTCACAGGAA-----CAGTTTAACAAGGAGTTCAAGCTGAGCTG-AGAGAATCGAATGA----GAGCGCATTTTATCA--------------------------------------TGTTTGTTGAGCCATTCTCTGCACCTACCTCT--AAGAGTTGTGAAAGTACATGT-ATATGTCACATG------GAAAATAAATGAATA--GCAGCTAAGGTAAACAAAATACTTACAGAGGAAAGTGAAGCTATTGAAAGGTTAT-------AGAATGCAAGTCAGAAGAGGCCGAGATGACCATCTTTCAGCCTCTACTTTATATATAAGTTCTTACATATGAATGAGTTGTTGAGTTAGGATCAAATTTATAGAGGTAAAGAGAATTGGCTGTTCTGTACCATG-TGGAAAATA----TTACTACTggggctg s bosTau2.scaffold3559 35064 1184 - 79695 TAGTTATTTTTTATATTAAGCTTTCTTTCAGCCT---TTAGTCAGCTT-GCACAATAAAATCCTTT------AAATTG-TCTATTTATTACCAGCCTTTGATTTTTCCCCTCTAAAAACAC-GGTTTCCTCTGCCCCTTTCCC-AGCATGGTAACGCACATCTAGAGATTCACAT--AGAGAACAAAGTGTGACACTTACCACATTAATAGGGGGTCTTTTGAAGTAAAATGGTAGCTTCTCTGTCACAGTTATGCAGACTAAATCCACATCTAAATGTGTACAAGCAACCTGTCAAGGAGAAAACACACGTAAAACCAAAAGCAAAACTGGCACATGTTAAGAGTGTGGTAGGGTCAAACATGCCATAAAGAAATGCCAATAGATACGGCTCACTCAATGGACACCGT-AGGGTTCTGTGGTCAA-TGCATCCGTCCGCTTGCAAAACCAATGGTTAGCCA----TTCACATTTGGTTTGAATGGTTTAGCTGCAATCCAGCTGAAGTAGGGTGGTATGTCTACAGAACATCTCAACAGACATGGTCCAGAGACCCTCTAATCCACGGTCAGCTACACAAGGAGAGGTTGCTAAGAGAGGCTCAATTTCTGGAAGGTTACTTCAGATTGTTCCAGA----AAAAGGAAACGGTTCTGATATCCAAAAAAAAGCAAAGCTAAAAGGAACGTATGCATGGTCCACTTTCTCCAGAAATTCTTTATTCTT-----TATTTTTGTGCCAGCAATTGTCCCACATCTATGGGTCCGATCAGTCTACTGAGTGGTCAAAGAAACACGTGGCACTACCAACAGCATTTTGTTCAAATGCTGATAGAAACGAAGCATCTCCACAAATGGTCAAAGGAGAACTGTTGTAAATCAAATGATTCTGAATGCATTTTTTTAAACTGTTAATTTCTCTCCTTTCTTCTCATTTTTGCTATTACTTGTTG----ACACTCTGCATTTACTTCCAAAAGAGATCTGAAACTGCTTATAAAAAAATACATGCAAGACAAAAATAAACGGATAAGGAAACGAGGATAAAAGGAAGAACAGGGAAGGAAAATAAAGCTGAGGAGTGGTTACTAGCTTAAAAGTGCAGGCTAGAAGCTGCACATCCGGCTCTCATTTTGCTATTATTT---------------------------------------------GATTTAGAGAGAGAAA-AGAATTGGCTCTTCCCCACCATGACAAAAAATAAGCCTCACTATCAATGCCG a score=4479 s mm7.chr19_random 756603 241 + 2598976 CAGTTCTTCAGCAGTGACAGA--TGTCATGTCGCACCCATTTTCCTCAGAATGTCAAGCTTCAGTCACTCTTGCCCCGGCCCTATGGCTT---------AGTGGTGAGCAGAGGCCATCTGGCT---------------TGTCATGGTAAGCCCGAGAAACTA---TGTTCTGACAGAAGTCCTTGGTTCCTAAAGAATCCG-CACATCTCAGCTGTTCCAGCTGTGTAAC------------------------------------TCACAAAGAGTGACCGAGAAAAGCTCTGCAGAGGAACTGA s bosTau2.scaffold3559 36368 304 - 79695 TTGACCTTTAGCGATGACAGGACAGGCACATCTTATACTTTTTCTTCAGAAT-CCCTGCTCCTCTCATTGCTACCCCCACCTCAGGGTTCCAGGAAGCAGGAAGTGATCCGAGGCTGCCTGGCTTTAAGATAGTCTCAGTAACTTAGTAAGCCTGGGAAGTAATGCTGCTCTGGCAGA--CACTCGGCTCATAAAGGACCTGTCCCATCCCAACTGCTACAGCTGTCTAACTTTTTTTTTTCAATGACTTTTATAGTCATTGAAAATTTGCTAAGAATGGATGAGAAAAGCTCTGAATAGCAGGTAA a score=4911 s mm7.chr19_random 756881 702 + 2598976 TCCACCCTTTTCCTTCCCttacattgctgaggatc---------------agacctgggtcttgagaac-gccaagtgctctccca-----ctgagccacagccccggTAACCACT----------------GAAATTGATATGCTCAGTCCAGCA--------CTAT---------------------------CACCTATAAACATACATTTTAGAGACTCTAGGATTATATTCTATAGCTAAAAATTCCACACAGGC-TAGGGACAATAGATCAAGAATGGTCACTGCCAGGCAAATCACAAAAGAGAGGACAGAATAAAAAACCGTTGCATTTCACTTAAGTAAA----------TTA---------------TGACCCCTTCCCTTGGGCTCTTAAAGAGCAGACTATGCCTCTGTTTGTAATTACAGAACTCAGCATATACAGTAAGGTACAAAAAGCATGGTGACAGGAAGG------ACAGAGGGAGAAAGGGAACAAGAAG---TAGGT--AAATATTTCTGAAAAAGCA-CAAACAAATGCTTGCAGTAGCTGCCCCTGGAGTGATGGAGCAGGGAGCTGTGGTGAGGAGGTATTTCTGAGGAGATGCATGAGAAAGTCAGTGTTGGCTGCCTCTGGAAGGCTTGGTTTCTATACACACACTCCTGTGAG---TTTGAAGTTACTCTCTCTCACAAAC-CTAATTAGTTTTAGT---GAGAAGATGGTGTGTTTTTAATAACTCTGTTCAATG----ACTCCCTAGTAAGGCTGAACTGGGTTACTTCCCGTCATGCATTGCTTGTGTCTTCC s bosTau2.scaffold3559 36695 751 - 79695 TTTACCATTTTTACACTATCAGACTGGCAAAGATCATAAAGTTTAGTAATATACTGGTGACACAAGAACAAACAAACGGACTCACAGGGTTTTCAGAATCAGTCTCGAAAAGCATTTCGGCAACAGGTATCAAGATTTTACATGCACACATCAGCATATTTCacctataggaaggtatcctacagagaccagaagtacctataggaatgtatcctatagagaccggaagtCTGTTCTATAGCTTTATACCCTATAAATGCTTCAGGATATTAGTGAAAGAACATTTGCTGCAGTACCAATCACAAAAGGTTAGACACGAGTAAACATTCCTCAATTTTACTTAAACAAACAGGGTTGCTTTACACAATAGAACACGCTGACTCCTTC-----------TATGCAGCGAGGCACCTCTCAAATGGATATTATGGAAC--------TACTGGCAGGTGAACAAAGCAAGGCGTCAGGAAGGCAGGCAGGAAAGGGAGAGGGGAATGAAGAAGGACTGGGTGAAAATACTCCTGAAAAGGAACCCAAGACCTTCTGACTGTGGTTGCCTCTGAAGAAAAGGGACAAGGCGTTTTAAGTAGGA----------------------------------------------GGATGGTGTACTTTTCA-GCGTACACCTCTTTGCACTCTTTGAATTTA----TTATTACAAGCACAAATTATTTTTCATTTCAAAAAGCTGATTCATTTCTTAAAAGCCTGTAAAACATTCTTCTCCAGCGTAAAGCTAAATTAGGTTACTT--GATTATGTATTGCTCTTTTTCCCC a score=12551 s mm7.chr19_random 757601 788 + 2598976 AAGGACAT-CACTGCTAAGTACTTTCAGCCACAGAGGACAGCCTCATTTGGCTCCTCTGACCTCTTGAATTTAAATGTTTCAAACTGTATTATTTGGTGATTTAACTTTCTATCAATCCAAACGTT---------CACTCAAAGAACTATGTGATGCAGGGGCACATGCCC-ATGTTCCTGGCACTGGGGAGGCTTAATCTAATAGTCCCCAAATCATT-AAAACAGTTGAACTATGTCTAAAATAGTTTTAGAGCTAAGTATCTCAGTTTTCTCAGGAAATTGGTAGATTATATATGAATTTAC-TTGGCCATCATTAACCTTTTTGGGGAGAGGAACAGAGAAATCTACGATGGTTTAAGAAAAGTTTGTCACCATGAAAATATCCAAGCATATGTATAT-TTTGTTGTTATGGCACACAGGGCCCAGGAGGGTAGTAGGGCTGTCACCCTTCACCCTGGGTATCTTTCATTGGTGTCAGCATTTATCAATCCT---------CACAAGGAAAAGTCAGGCTTGCCAAGG--CAGAGATGCCCATAAACAGTACCTCTC-------AAATGCATGTGTGCACAGAAG---------TCATCTAAAAA--CTATCACAAACGGAGCTGGCGAGGCTATATTTCCAGTGATTCATCCAATAGATTAGAGCTAGTAATCTGTAATTTAATAATTACCCCAGAGAAATCTGAAGCTGAAAGACTCAGACCACGTCCTGAGGATGCTACCTTGGAAGAT--------------GCATGAAGACCTCTTTCAACATCGTCCTGCAAA-GGCAAGGTCTGAAAGACTGCAGGAGCAGGACAAGATCAGAAC s bosTau2.scaffold3559 37481 794 - 79695 AAATACATGCATTATAATAAATCTTCAGTTACAAAGGACAGCTCTACTTGGCACCTTAGAC--------TTAAAATGTCTCAAACCGAGTTCTTTTGTTATTTAG----CTATTAATCCAAATGTTCAACTGATACACTTAGGTAACTATAAAAT--AAGAGCTAATGTTTAATGTTC---ACATTA--------TAATGAAATACTTTCTAAATCATTAAAAATGATTACATTATGTCC-AAATACTTGT--GATTAAGAATTTGA---TTATAGTGGTTTTGGCAGGTTGTATATGAATTCGTATCAACTGTTCTTAATCTTCCTCTGG------GCAAAGACTCTTATGAGGATTTAAGGAAGGTATTCCCCAAATGGTACATACACACATACACTTATCTTTGATTTTATGGAACAAGGAGAGTAAGAGGGAGAAGGTTCAGTCTCCCCCAA--------ATCCTTCATGGATGTCAG-ATTGGTACATCCTGGTGTTTTATGCAAGGAAGAGCCAGGCTTGCCAGTGAAAAGAGATGTCCATAAATGGATCCTCCCAACCTTTAAACCCATGTTTAAAAAAAAAAAAAAATCCtcccctgaagaatttgcttaaaatggagattaccaggccctactcccagcaatcaattcaataaggagggtctaatcacctgcatttcaacaaattttcatggcaaatctg-agccagtgcagccagaccacaccttaa--aaGGAGCCTGGAAAGATCCGCCCTTTCGGTAGCCCCAGGTGTTAGTACAAAAATGCTCTGCAAAGGGTAAGG---GATGGATTTTGGGAGCAGGAAGAAAAGAGAAC a score=3196 s mm7.chr19_random 758535 116 + 2598976 CCTCAGAGGTCTTTGATGACTAACGACTTGCTTAATCACTCCTTAATCTATCAC-------AAATACTTGAGAATTAATACACTCTTGCATTTCATAAAAGAAGCCACCAAAGGCAGGGTGTT s bosTau2.scaffold3559 39845 121 - 79695 ccacaggggtctctgatgTCTAA-GATGCACTCGATC-CTACTTTCCTTTTCTCTGAAATGAAATTCTAGAGAATTACTATAACTGAGCATTTCAGAAAAGGAGTCAGCAAAAAAGGGGAATT a score=2629 s mm7.chr19_random 758745 86 + 2598976 CAGCCTCCTTAGTCAATGGCTCCCTCTACTGG-ATAAACTCAGGGAGAAAGATGTGCTTAAAaaatggtcagcccaaaaacaaagta s bosTau2.scaffold3559 40050 75 - 79695 AAGTCTCCTTAGTCAACAGCTCCATCTACTGGAATAAACTTAGGG---AAAATCTTCTTATAA---------TTTTAGAACAGACTA a score=6903 s mm7.chr19_random 758985 538 + 2598976 cttaaaaataaaCAACAACAAAGAAAATAGTACAGTTAAAGAAATGGGTGTAAGATTAAAAGATGTAAGACCAGCATTCTTCCATGCAATATTGTCTTGGCAGATAGA-----------------ACCTCTCTGAACCTTCGTTAGGTAAACATTCAGAGCTCCA--TCTAAAAGTAATTATACCTCATTTCTGTCAGCAAAGCTCACTCCTTTAAAA--AGTGTTTCAG--GCCTTTCTCCCCACTTTAGCCATTTAAAGGGACAGGGGCAGTCTATCCTGAA--GACAAAGTGAGCTAAGC----------TGCTTGCTCTTCTGAAAAAGCAACAAAAGGTCAGTTCTAAGAGAACAAAAGGAACTCAATCACAAAGGCTCTCAAGAGCACACAGGGGAATCACACAGGCATGTGGTTGATTCTGAGGGACTTCTGGCGACTAAGGGCTGACACTCACACTGGCATACGGCTTACATCTCAGAGCGTGCAGAGGAGGAAGCTGGACCGAGAGGG----------------------CTTGCCCTCTCCTTTCGTCACTGATAGGAGTG---GGTAAGGACAGAAATTGCAGTGGT s bosTau2.scaffold3559 40125 540 - 79695 CTTAAAAATCGATTAT------------------------------GTTGTAAAATTAAAACATTAAAGACCAGC-----TCC--GTAACACCCCTTTGGTGGATACACTTTTTGGTAGATGGCTATTTTCTTGAACTGAGACAAAGTCAACATTC----CTTAATTTCTAAAAGCAGCTATATCTCACTTTACACGGTAAAACATATTCCTGAAAAACTATTATTACAGTTGATTTCTTTTCTCCTGTGATCACTAACAACTCCCAATGTGTTCTGTCTCAAGCTGACAAAATGTATTGAACATATACATTAAACTCTGCCTCCTAAAAAGTCACAGAAATGGCCATTTGAAAAGGACAAAAGAAAT----TCATAAAGGTTCTCTTAAACAAAAAGGA-----ACACCAGCAGACAGTTGATTCTGAAGGATATCTAG-----AAGACC--ATGATCATGCTAGCATACGGACCACGCCTCTGAGCACACAAAGGA-GAAGCGAAGCAGAGAAGGACCTTTTGTGCCACAGTAGAATCTCGTGCCTTTCTTCTGTAATACGCAGCAGCAAATAGCAAGGACAGAAACTGAagtggt a score=10093 s mm7.chr19_random 760420 185 + 2598976 AACAGAGCACCCACTGTGGTATAACAACAGACTTAT-ATCTAAAGAGA-AAACGTTACTCTGTTTCACCTGTCACTTACATGGAAAAGCTTTTCTGTCTTTGGAAAGACTGCAACAATATCATACAGCCGGACCCTTGACGAAGTTGCTCTCTA-TAAGACAAAAAGAATGTTATCATCCAGTAACAA s bosTau2.scaffold3559 41081 187 - 79695 aacaggtcatctacaaaggtacaacatcagacttcttatgtaaaataaTGAGTACTATTTTCTTTTAC-TGTTACTTACATGAAAAAGTTTTTCTGTCTTTGGAAAAACTGCAACAATATCATACAGCCGGACTCTTGAAGAAGTTGCTCTCTAGTAAAATGAAAAGAATGTTACCGTACAGGAACAA a score=5917 s mm7.chr19_random 761899 246 + 2598976 ACATGACTG----TGACACA--CAAGCTCACAATAAAAATACTGCTCAGTATAAATTAAAATGCCAGA--TATAAGAAAATA--------CTTTTGGTCTAGGATAGGTGGATACACCAGTAAAACACATTTACTGTTTA-ACAGGAAAACCTTAAACCTGATAATATAC-------------ACAAGAATGAAAAAATAC--ATTCAAATGTACAAGCCCTGGATGCTGGAAC--CATGGGATATTCCTTCTTTGTCTGTTGGTACCTGTTAGCTTTTT s bosTau2.scaffold3559 41661 272 - 79695 ACATGACTAAGTATGACGTGATTAGGTTCACGATGAGAATACTGTTAAATACAAATTAAACTGCTAGATGTGTAAGAAAATAACCAAGAGCCCTCCGACAGAAGGAGAGAGATTTATCAGTTAAA------GATTATTTATAAAAGAAAGTCTCAAA-CTGATACTGTATGTGTATGCATGTGAAAAGGCTGAAAAAATACATATTCAAGTTTACAATCACTGAATGATGAGATAATATGTGCTATTTCTTCTTTCCCT-TTGGCACCTTTTAAATATTT a score=9303 s mm7.chr19_random 762178 304 + 2598976 AAGGAACACAGGCAGGTGTCATGGATTTGAGGGATACAGGGGTGAAAGATTAGGGTGAGATGGAATACGACAATATCTAACATTGGTTAATATAGTTTAAGAGGCAAATGGAGAAAAAATAATAAACTTACCAAAACATTACAGTGAGCTGGATCTGTAACTATAATTGTCAATCTAGTTAAAATTTTAATTGGTCTTGATTTTCCCTATGAACAAACAAACAAAAAAACATTATTAAAAAAGATAAAGTGCAAATGAGTCATTGTCTTTTTTACCAGTGGAAAATAGTAAAAATTACAAAGTA s bosTau2.scaffold3559 43940 253 - 79695 AAGGAGAGCAGTCAAGTGTCATACACTGGGGGTTAGGGAAGATGTAAGAATGAGGTGAGTTGAAA-------------AGCAAGTGTTAA------------GACCAAGAGAGAAGAAA-AATAA-CTTACCAACACATTACAGTGAGACGGATCCGAAACGATAATTGTTAGTCTAGTTAAAATTTTAATTGGTTTTGATTTTCCCTGTAATAAAAAAAGCACAAAA---------------------TACAGATGACTGATTTTCCTCCTTACCAGTGGAAAGTACT---CATTAAAAGGTA a score=7462 s mm7.chr19_random 762594 168 + 2598976 CTGGCAGGAGGAGGCAGGAGAGGCTCAAGTTAGAGAACACCAGGTGAGGGTGGGCATGTTTGAATCGAATGAACAGA----------CTTAAAAGACACAATGCCTACCTGTACGATGGGTAAAGTTGTGAAGAGTTCAGAAACTGCTATTGGCTTTTCAATTTCCTACAACAAATGA s bosTau2.scaffold3559 45180 175 - 79695 CTGGTAGACAAAGGAAGGGGCAGTGCAGGTTAGAGAACCAAACGTATGACTGGGAATGTCTGAACTGGATGAGTACATATTATGTTTCTTAAA---CAAAGCACTTACCTGTACAATTGGCAAAGTTGTAAAAAGTTCAGAAACAGCTACCGGTTTTTCAATTTCCTATGACAAATAA a score=6376 s mm7.chr19_random 763397 256 + 2598976 ATAGTTGTTTGCCTAAAAAGAAATATACATATTGAC-AGTCTATCAAGGAGAGAAATCAGTCA---ATGAGTTCATGAGACCATGGCACAGTAAACAAGATGACAT-----GCTTTCAGTTCATTTAATGGCAATGTACTTTTAAACATCTTTGAAAGTAACTTAGTTAATATAAACGCAACATTAGGAATCCTTATACTACATTAGAATTTTTCACAAACAAAACAAAAATC------ATTTGTATATGTTCAATTGCTAAAGTAAATAA s bosTau2.scaffold3559 45527 251 - 79695 ACAGTTGTTGGTCTAAGGAGAGATACACATATTTACTAGTATGTTCGGAAGGGCAATCATTCAGTAATGAGTCCATGACA-----GTAAAATAAAAAAGATTAAATATTGTGATTACAGTTTAAACAACAACAATGCACTTTTA---------------AAGTTACTTAACATCAAACCAACTTTAAGAATCTTTACACCATACCCCAGCACTTCACAAAAAAGTTATCATTTGCACAGATATGTATCAGCTCAACTGTTAACATATAAAA a score=14646 s mm7.chr19_random 764494 923 + 2598976 caCTTGTCTCTAGATCCATATTCCCAACACAGACACAAGGATTTATAAACACTTGTATTTAGCAACCAGTTACATGAGAAATTCTACTTTACCCGTTTCTTTTCCTTAAAGTCAACAATGTGATTGATGGCAACAACTGAGTATCCCACTGAAAAGAAAAATAGATCATTT-----AAAAAATATACTTTCTTGTTCACA-ATGATCATATTGATAAGAGATTCAAGAGTCTGGCATGACAAtagggatgtagctaagtgtcaggatgcttgctaggcatacacagagtcctggattcaa--ttccgagacctggaaaataaGGGGGTGGGGTAGGAGGCAGATCCTGAGCCCTACTGTTTATT-GTGACTTAAGGTGAAGTTTCAGGTTCTTCACCTGTCCCATGATGTTAACAGCAGA---CAGGACTTTCAAGTGTCATGAAAATGAAGTGAAACAGCACCAG-TATTTTAGAAGAGTGCACATATTTAGCTGCCACATTTAGAAGCCAGGCACATATTTAGGCTGTGGT----TCATATTAACACAATGCTAAAGAC-------------------------------------------------------------------TCAAGTTT-TATGTCTTTC--TGTCACCTT-----------TGTTATCATTTCTTTCTTCTGCGATC--CCCCTCACATTT-------GCTCCCTTTCCTACGGAGCAATGGAGTGATGACTCCCTCACA-------------TCTCTTTTGAGGTACTCTACAATAACAGACGAGGGACACTACA-------GGCTTGTCTT-------ACCATCACAACA--------GACAAGTGCCCTGTCCCCAATACATTTAAATCACGACTCTTGTCTTTAAGTTGCCTAAAATACTGACAG-GATAATAGTGTATTAATATTAAAAGAATAATGCATGGTAATGATAAAATAGCGGCCCTTCGTCTTCCCAGTCAGCCCAATAACGCCCTACTTTCCTTCCTCTCGAAGGGATTT---GAGAATCTATTATTTGGCAGGCCCT s bosTau2.scaffold3559 45796 969 - 79695 CATTTGTAGCT---TCCACATTACCAATACACACAAAATAATT-ATAAATGCTGGTTATTATTGTC----------AGAAAT-CTATTTTACCTGTTTCTTTTCCTTAAATTCAACAACATGATTGATGGCAACAACTGAATAGCCCACTGAAAAGAAAAATTGAACATTCTTGTCAAATACAACAACCTCTTTTACACATAAGCTCATACCAAT-------TCA------TGTCAAGACTacaagg-----------tagaagaatggtta-tgagtatggac-----tctggagtcagatttgcctgttctcaaa---------------------------cctgaacatttccacttaaaagttacttaaccttaagtttcaggttcttcatctgccaaacggtgataatatcaggattcatctcatacaactgtcatgagaattaagataacacacgctggatgttttagaacagtgc----------ctggcacaGACA-----CAGGGCTTTGTTT-GACTTTGGTGATGTATTATCAGCATGACAACAAAGACCCTTATCTTTGCCTATCTTCTTTCAACCATTATTCTTTTTCGTGTCCCTATGTTCATTTTCATCTCATCAAATTTATACTTTTTTCACTATCAACTTCATTCTTACGTTGTTGTCATTTTTTTCTGTTGCTTTTTACCCTTTCTACTTCTTCAGAGACCCTTTTGCTAAGGAGAAACAGGATGACCACTAATTCACACCAATGTCCACGTTCTCCTTTGAGCTACCC---ACCAAGAGACTGAAAACTCTCTAAAGCCAGGGCCTGGCTTTATCAGCCTCAACACAGCACTGCTCCGGACATGTGGACT-TCAAAAATATGTTTAAATCATGACTCCAATCTTTAAGCTATTTAAA-CACCAACGGTGACTACAGGATATTAATATTAAAAGA-TAACGCATATTAAGGCCAAAATAGTGGTCTCCTCCCTCATCAGTTTGTCCAAGGTC------CTTTTCTTCCTCTCTCAAATATTTACTGAGCATCCATTACTTAACAGACCCT a score=12535 s mm7.chr19_random 765492 832 + 2598976 CCTTCCCATTCTCTAAGCTCCCACAGCAGTTCCTGCCCGAGACCCAGCTTTCTGTATTTGACAG----------ATGCCGTGTGACTCAAAAGGGGCTGATACCAAAAGCACTGGCTGAGGGGACCAGT------CCCTGTTCCTATC-ATTCATCAGCTCGCAGGCTCCATGCCAATGCCTCGACCCCTTAGG-CCTCCGTTCTCTCCCTCTGCACGAATGACTGGGCAAACACAAACAACAACAGCTTTGTCAAGAGCC--CGAGTTTCTCACCCAGGGGATCCGGGTGATACTGCAGCTATTCTCTGCCTTTAGGGACGTCAGGCAGATCACACGAGAGACCGGAATGGGGCCTGAAAAAACTACC--AAACAAAGCTGGATGGTGTGGGG-------GACAGAGCC-----------------AAGCCAGTAGACTCACGGTGAGCAGCAGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCTGAGCCCGCTCTTAAATCCAAATCTGCGAACGCCGCCATGCTGACATCCCAGGAGCACCCGCGCGCCAGTCTGCGCAGCCGCCGTGTT---GTCCCTCAGGCATGCTGGGAGTTTTAGGTTGTTCCTTGAGCTTTCTGGGATTTGTAGTTTTTCTTTCTCAGTCGTCTTGGGTCGTCTTGCAGAGACTTTCCTATTCCCTAGAATCCAGCCAAAGTTAGTGTGTTGGGACCTATAGCCTTACTT-ATTCATAATTTG----------AATGGGAATGTTTTGGTACTCTCTGA----------TGGGGCTCAAATCTCCCATGCTCCTACCAT-ACAGCAATGC--AAAGTGACTCATTTTAAAGGCACCCATAGAGCATACCGATGTCAAGCAGACATTTCTAAGGTCTTGAAGCCTG s bosTau2.scaffold3559 46986 836 - 79695 CCTCCCCATTCTCAGGGCCCCCACAGTACTTCT-------GCATCAGTTTCCAGCATTTGACAGCATCAGGACAATGTCAAGAGACGCAGGAAGGGGCGATATAAAAAGCACTCGTGTAGGTGTACACTTGGGAGCCCTGTTTTCTTCTATCCATCAGCTGTGAGGC-CCATGCAGATCCCCCGCCATGTCAGGGCCTCAGTTTCCTCAATTCCCAAGACAGAAGGAGCTGGACTGGGTAACG-----TCTCCCCAGTGCTTTCGAGTTTCCCGC-----GGGTCAGAGCAACACCGCAG-GGGCATCAGTTTCCAAGGACAC--GCCGGAGGCCCCAGGACACCAGAACTAGGCCCGCCGGGTCTCTCCAGAGCATGGCTCTACAGCCTAGGGACAGCGAGACAGCGCAGGCACGGGGGCCCGCGAAGCCCGGGAGACTCACGGTGAGCAGCGTTCTCCACGAGCCCACGCAGCGCCTTCAGGTCAGAACCCGCCCGCAGGTCCAAATCGGCAAACACCGCCATGCTGAAGTCACGTGAACCCTGGCGC------CGGCGCAGCCTCTGGGCCCCGCCTCCTCGGGCATGCCGGGAACTGCAG--------------TTCACCGGCTCGGTCAGCCCCGCCCTCCAGTAGTCT--------------GCGGCTCTC---------AGGCTCCAGCAGAAGTTAGCATGTGGAGATTAGCAGCCTCGCTTCAGTCCTTCTTCGTCTTCTTCCAAATGAGAATGTCTGGTTTCTCCTAGGGTTGCGGGGTGGGAGTTCACATCTCCCACCCTTCATCCTTGGAAATAATGTAGAAAGTAATTCTTTTAAAATGGACATGaaagtgaaagtgaagcccaac-----tctttgcgaccctgtgggctg a score=1575 s mm7.chr19_random 766494 58 + 2598976 GGGAAGTTATTTTTCTTTCCTATTTCCACAGTACATTCCATTCTTTGAAAGTGGCCTT s bosTau2.scaffold3559 48033 56 - 79695 GGGAACTTGTTCTTTTTTTCCCCGT-TAAAGGCCATTCCGTTGTTT-AAAATGGACTT a score=4926 s mm7.chr19_random 766620 216 + 2598976 CAACCACAAGATGGCAGAGTGCTCTCAAAGCTGATGGTTTAGCGCCAACACATCCTTTAGCCAGAGGACTGACT------GGGAGGGGCAAAAATGAAAACATGTCTTACAATGTTTTTCATGAGAAACATACA--CATAT------CATTTGATGTTTCTACTTTTAAATGACCCTTTTAAAAATGAACTCTTT---AATATTGACAGATCAATTATTCAACAACATAGAAC s bosTau2.scaffold3559 48199 206 - 79695 CAGCCACCAGATGGCAGGGTTCTCTCTAGGATGAGAGGTTAGCTCCATCA-GGGGTTTAGCCA-AGAACTGGGTAGAAAAGAGAGGGGCGTAATTGAAA-------------------TAAAAAGAAATGTACAATCAAATTCAACACAATTGATATTTCCACATTT--TTGAACTTCGTGTAAGTGAACTCTTCTTAAATATT----GATCAATGATCCAAGAACATAAAAC a score=4673 s mm7.chr19_random 767275 198 + 2598976 tcatcttgcctcagtatccttggttttgggattacagctgagcactgccacaccTATGTTTGGTTAATTTTCATAAATGA--------TTGTTT--CCAATACTTGATATTTTCCAAGAACAAAACAACAACAAAATAATGTCTGCAACCAGACCAAGGCCGTACAAAACAAACCCCTTGC-TTTCATCAGAATGTCTAGTTCTAACTT s bosTau2.scaffold3559 49282 202 - 79695 tccttttgcctt--taatcctgtcccTAGAATTGCATGTAGTAGCAAGCAATTCTCCTTTCGGCTAAGTTTAGTGAAGAAGAAATCTTTTGCTTTCCCAACACTTGATATATCCTAAGTA-AGAATAA----AAATTTACTTCTGCAAAGAGAATGAAGTCATATAAAGCAAACCCTTTGCTTTTCATCAGAATATCTGGTGTTAATTT a score=6839 s mm7.chr19_random 767503 154 + 2598976 GATCACAAAATCTAGATTGGTCAGTCGAGTAGCCATTGTGTAGTGGACCTAAATAAGAATTTTAGTTATTTGATATTAAGGTTAGACTACAGAGGGCATAATTCTTTAAGAGTCATGGTGATGTTACTGTGGTCTTCACCTTTTAGATTCCCTT s bosTau2.scaffold3559 51239 154 - 79695 GACCACAAAATCTAGATTGGTCAGAAATATGACCAATGTGTGGTGAAGGTGAATAAGATGACTCATTATTTAATGCCAGCATTAGACAACAGAGAGCTTCTCTCTTTGAAAGTCATGGCGCTGTTGCTGTGAACCGTACCCTTTAGAATTCATT a score=9313 s mm7.chr19_random 767759 648 + 2598976 ctccCACTGCACCATGATGCTGCATTTCAGAACAAATCACTGAGCTTAGGTGAAGAGGAAAGGAAGGATTAGAAATGAAATGAAATGAAGAGATAAAAACCACTGAGCACTGCACTGCGGCAGAGC--ATCTGCCAAGTACTTATGTGTGCATCTTG-TTAATTTTCAAAGCAAATAAGTATT--------TTTTTTAAACCAACATCTACCTTTTTGACATTTGAGCTAGTGAATGCTTCAGCAGTATAA---TG---GTGGATTGAAGCAT-------------TTTGG----------CTCAGGAGCTGCCTAGTGTGTTGTCTCCTGAGAAAAGCCAGTAGGGAGGACAGTTGTGGATGGTATGaggagaga------agaggaaaagaaaaaagggaggttaagg----------aaggagagaggaagcagggaacgggaaggaaggggaaggaggc----------------aggactgggcagagagaaaa---------------ggatggg---aaagaaaaAAGTTCAAATGTTGGCCT-------GAATGGGTGGCAGAGGCCTCAAGGATGCAACACTTGAAGAAGACCTTAGAAATTGCTGAACGGAACACAA------------------CTGTATGTTTT----------GCTGATTTAATTC---TAACAGGCAAGTGGGGTGATGGT-------TGATAGTGATGGTGGTTCCTGTTTTCTGGGGCTCTAGGAGAATGGCTACTAAATAATTTTCTCTTCCATAG s bosTau2.scaffold3559 51393 735 - 79695 CTTCATCTTCATC--------------------------CTGGGCTTAGATAACAAGGGCAAAAAAAA--GGGCAAGAAGGAAAATGAGCAGATGACAGTCATTGATCACTTTACTGAGGGCAAGCCTATTTGTTAAGTAATTACCTATATATCTTATTTAATTTTAAAAACAGCTATGAGTTAAGTCCTGCTTTTTAG--TAACATCTGCATTTT--GTGTCTGAGTCATCTAAAACTTGATCATGGTAGACCTGCATGTGGATCCAAGCATCTTCATCCTGGGCTttggtgtactatctcccgggcaaagcttggtatactgtctcctgggcaaagcAAGCAGAG-GGAGAGT--TGGACGATGggaagggagaggggagagaagaagagggaaagggacagtggagggctggagagagaggaaagaagaagtatggagggagagggtaggggaggaaggaggtggaagaggggaggaggaatgagaagaagaaaaagagaagatggcactgggaggggagcagagaagaggggTCAGAATTTGGCCTAGGGGTGAGATGGGTTGGTGTAGCTACA-----GCAAAAAGGATAGAAGACCTTGGAAACTTCTGACTGGAAAATCATAGTACTATATAATTACTCTACATATTTCCTATCTACAGtctgatttaatccatgcaaccagccaatgagatattgttattcctattatatcaaggaggaatcct--------gaactcaaaaaggatgacttTTCAGTTATTTCCTCTTCCTTAG a score=14054 s mm7.chr19_random 772509 303 + 2598976 CACTGTTTGAGTAATTTTTTTTTTAATCAAGGAAAGAATTTTACAACCTAGATTATATCTCCTTGTTCAACCATCAGTTTTGTACCTTAAAACAGAACTGATATGCCTAGCTATTCCACAGTAAAGAATTGCAAAACTAAA-----GAATACTTTGAACTTTTGTACTATGCTACAAA---AATTTCCCTGGGTCTGTAACACACTAATTTGTTTCTGTG--------------TGTGTGTTTTA-TGTTTTATAATC---AAGTTATGTAGGGTTAGCAT--TGTTTGCTAGACCTGGTATCTACTC----CATAAGATTC--AGTTTCCCTTCTT s bosTau2.scaffold260 151569 331 + 587702 CACTGTTTAAGGAATTTTT------ATTAAAGCAAGAATTTTATAATCCAAATTACGTTTCCTTGCTCAGTTATCAATTCTGTTATTTAAAACAGAAGTGACATTCTGAGCTATTCCACAGTAAAGAATTACAAAATTAAAGAAAGGAATGCTTTAAATTTTTGTACTTTGCTGAAAATTCTTTTTCCCACGGTCTATAAAACATTAATTTGTTTTTATATTTTACTATTTTTTTGTGTTTTTTGTTGTTTTTAAATCAATAAGTAATCTAGGACTAGCATTATGTTTGCTAGACCTGGCATTTGCTCGGTACATAAGGTTCAAAGTTTCCTTTCCT a score=13807 s mm7.chr19_random 828918 358 + 2598976 TGGACATGAATATATACACTTACTTACCAAGGCTGTTATTAATCTTTTCTGCCATTGGAATGTTTCTTCTACCAGAAAACTCCTCTCCATGATCAATCAGAGCTTCCTTTACTGCTTCATACCCATGTAATACAGCAATGGGCTGTGAGCCCAAATACAGAGTGAACATGGGGCCATAAGCTTTTGAGAACTGGAAATAGGAAAGAAAAGACAAACACTAGCAAACATATAC---CTTTAATCTACATAGTGTAAACCTCATTCACACTGATATTATCTCTGTATTTTAATGTTTTTATTTAGGCAAACTCACTTTCAAATGGTTCTGAAGCTTATTTAT--ATAACATTATGGTAATTATCA s bosTau2.scaffold6842 17251 357 - 42610 TGGACATGTGCATATGCAC--ACTTACCATATCCTTTATTAACTCTTTGAGACATTGGGATATTGCCTCTTCCAGAAAATTCTTCTCCCTGATCAATTAGGGCTTCTTTCACTGCTTCATACCCATGCAACACAACAGTGGGCCTCAAGCCAAAATACACTGTGAACACAGGGCCATAGGTGTTTGAGAGCTGGGAAATGGAAAGAAAATGCAAATATTAGCAAAAGAAGTCACAATTTGGTCTACTTTGCTCA----TGATTAAGACTGTTATTATCATAATATTGTTGATAATTTATTCTCCCACACATAACTACAAACATTTCTGGATCTTATATATCAATATCAgttcagtcactatca a score=1143 s mm7.chr19_random 829276 85 + 2598976 ATTGCC-----TAGTCAACC--ATGTAATGGCTTAGGGTTCAGGCAGTTGTTATGCGAAGATTACAATGAATTTTTTCATCAAAACATTCAG s bosTau2.scaffold3066 23344 90 - 92066 GTTTCCACTTATGGATGACCTGAGATCCTGGATAATGGTCCAAATAACTGGtacacg--gattataattaatcctcaaatcagcactttcag a score=9129 s mm7.chr19_random 935179 245 + 2598976 CCTCTTCCTGGTACTCAACCCTTAGCAAAAAGTGCTGTGAGCGCGCCTTCCTTTTTGCTCCCACGCCCCCTGTCGGCGCCTTTCGTCTG--CTTTATTTCTTACAGGGCGCTTTGCAATAGGCTAACCCACTTCCCAGTTTCTACACCTCTGTGCTGATTTCCGACACAAAAACCTGATCATATCATTCCAGGGCTTTAGAAGTTTGGATTCACTGACTTGGTGACCCATAAGATTCAAAATCTTTG s bosTau2.chr26 6666772 232 + 35715000 CCTCTTCCAAGTAGTGAAC---------AAAGTC-----AGCTCTCCCTCCTTTATGCTCCC-TGTCTGCTGCTGGAGCCTTTTCCCCAGCCATCATTTCTTACTTGGGCCTTTGCAATAGGCTAAGTGAGCTCCCAGCTTAAACCCCTCTCTACTGATTTCAGACACACAGAGCTGATCATGTCACTCCAGTACTTTGGAAGTCAGGGTTCTCTAACTTTGAGGATGAAAAGATTCAAATTCTTTG a score=30343 s mm7.chr19_random 990475 913 + 2598976 TTTTCCCAGTAGATCTTTCTAGAGGCTGGGAGCCTCTCCCAGGATATGCATGCCTTCCTGGCCAATTAAAAATAAATTCAGCCACAGGAAGTAGGATCAACTCACTCTTCAGTTGGCTTATGATCCAGAGGTGGAAGAAGCCAAGGTCAAATAGGCCTGGGGTGCTATTTTAGAAGAAAGGGAAATAGGGCCTACATAACCACCCTTCCATGACCTGTGGTTTGAGAATCGGAGCTCTGCATGGTTTC--CACCACAGCTGTTT-TCTACATCTCCAACACTGAGCACAGGAAATGGAATGGCACATAGGGTGCAGTTTATAGACTCTGTT------GCAAGAGGAATGTGATCTCTGGGCTCTCACATTCTCTCTAGAGTGGCATCTGAACTCACACATTAAAGG-AATTGCCTGCCT-CATAAAAGGGACCTCAATGTGTGAGAAGGAGAAATGATTTTAGAGG---CATGTAAGTGGGTGTGTAGAGTTTCTGTTTAGACAGAA-TGTTTGAACGTTTTAGGAATATTTCAGTCTATTTGATTCTTGAAACATGACTACAGTGTGACCTGAAAA-------------------------------AAAAAAACAACAACTTACGATCACATAAACACTAAGCGTTCACTTTCTTCTAAGGGCCACAGAAGACATAGCACCCAGACTATGTTAAATTCCAGACAGCTGGGAATTAAACCATCTAACCGAGGCACTTTGCGGAACTGGCTCTGATAGCCATATCTAATTCCAGGTGAATCGATCTTATTTTGAAAGGTACTGCCAAGAAAATGGGTGACTTGAGCTTCAG--TAGACAGGTACTTTTCTCACTTGGAAATCCTATGCAGCTCTAGATCTTAA-------------------------TGTTCTGTCTGAGCAACTG-GCTTGTAGCAGCATGCAAAAACCTAGGTGAAA-----------TCATGTCTCTGGGTTTCTGGCAGCTAT s bosTau2.scaffold2029 90322 977 + 145124 TTTACCTAGCAGATCTCTCAAGGGAACTGTAGCCTCTTTCAGGATATGCATTTATTCCTCTTCAATTAAAAATAAATACAACAAAAGGAAGTAGGATAAACTTACACCCTAGTAGGCTTACGATTCAGAGGTGGAAGGAGGCAAGGTCAGAAGAGCCTTGGGTACTATTTTGGAAGGAAGGGAAACAGAGCCTACATAACCACCCTTGCATGACCTGTGGTTTGAGAAACAGAGCTCCGAACAGTTCCCACACAACAGCTGTTTCCCTGCATCCCCATCGTTGAGGACAGGAAGTGGAATGGCACAGAGAGTGCAGTTTATAGGATCTGTTCTCTCAGAAAGTGAAACAGGATCTCCAGGCTATTAAATTCACTCCAGTGGCGCATCTGAACTCACTGGTTAAAAGCAATTGTCTGCCTACGAAGAAAAAGCTTGCATTTGTGAAAACT-GAAGAGCTTTTAGAAGTATTATGTAAACACTTGTACAGTCACTGGGTTTAAACAAAACTATATGAAAA-TTTAGAGACATTTTGATCCATTTAATTCTCATAACAGGAT--CAAGGTGATCTGGAAatatatatatatatatatatatatatacatataCACACACACACACACACAACCACATAAAGGCCAAAGGTTCAATTCTCTCTAAGGGCCATGGAAAAAAATG---------GGTATCTAGTTCCAGCCA--TAGGAATCAAA--ACCTATCTAAGGTGCTCTACAGACCTGCTTTTACTAATTGCATCTAATTCTGGG---ACTAAACTAATGCTTAAAGGCAAAGATGAGAAAATACGTAACTTCAATTTCAATTTTAAAAAGTGTCTTTCTAAAGTGGATGTTGTATATAACTATCACTCTTGAGTTGAAATTTTATAGCAAACCTCTTTGTCCTGTCAGGGCAACTTCATTTCGAGGATCTTGCCAAATCC-ATGTAAAAGAGTATCACCCTGATTTCCCTGGCATTCTGTTAGCTGT a score=14890 s mm7.chr19_random 992034 1822 + 2598976 CCAGACACAGGAGTCTGTTGAATGAAG------------------CTAAGACTTGATGCCATCTAT---CCAGGAATAATTTATCTGAGTTAAACGAAAATTCAAGCTTTACTTTCTACACCTGGTAATTC--TGCCGTAGAGAAATCC---------CATTCCATAATGATCAGCAAAACTGTCTACA-CTCCAAA-----------TCTTGTATCTTTGGAAACTGTCTAGAGGATTTACAAAGTCAACTGTCCTTTACTTCCTAAAGTTATACTGGGTAAGAGAAGAGAACATAATCTTGGGGACCCTGAGGGCAATGCTGCTTAATTTCCTATGATGTTGTCTTGGCCTGCT---ACATCTCATGGG----TCGACGACGGTGAGTCACTTTTCCAAAAGCTGCCACTAGAGGGAACAAAAGCACCAGGTTTGTCGCAGCGCTGCGCCTGATAG------GCTTTTCTTCACCCTGAAGATGTCCATTCCG---------ACATTAAATTTGCACCTTGAGATCTCTAAATATTCAGCGCCTACCCTGTTGCCCATGTGTTTTTGTTGATGATATTAT--GAATAAGACTCAATGGCAATGTTATCCTCCTACTTGTACCTTCTATGGAAATTAATTTAATATATTTGTT-----CTCTCATTTATGTTTTGTATTTTAAGGTTTTTCTGTCAAAATACCTAAAACTTCAAACTTGCATAAGGCAATCATTCTCTTCTGAAA----------CTCGTGAATCTACGGTGACATGTATCCAGCTC--TTTTCCTATGATGGACAGAGAACATTCTAAAGTGAATGGAGGA--------------------GAGACACACAGAGGAGAACTTGGGTGTTCTCTTACTGCTTTAACTGTCTCAGTGCCTGTATCCCTCACTTAGCATAGGA-TGCACCGGGAGAGTCAACCACAAAC--ACATCTTGTTTTTAGAAT-GGTGTACATCTTGAAAGTAGCATT-------------TTTTCAAAACTAAAAATGTATAGCCTATCTAACATAAAA----TAATACATATGGTTGCACATACTCTTACAATATATATTAAAGGGA-TATATAACT--------------------------CTCA-----TGTGAAAGTCCTCGTCATTTGTCACC-----TTGTTCATTCTAT------CTTCCTATTATCTC---TGTT-------------------ACTAATTTTCCAAAACACAAGGCGAGGTAAACTGAGGGGCTAAAG------------------GTATTTGCATGGTGTTGGAACTCTTA---GGCCATTAAGGGACTGTGCAATCTAGCTTCCAT---------------------------ACTAAAACTTAGATGCTTTGGTTTCATGTGACTGTTTAAGAA-CTCTGAAGTGTCTAGCTTCAGCTCT--------TATTTATATAGAAATAAAGATGGCTTCTATTATTAAATACGATTGTAATTCCTGTGCATTGGCCACTATA-AGAATGTAGACAATAGT-----CTCATTTAATTTTTGTCTAAGCTCTGAGGAAGGGGTGCAGACATG--------TATGCA--------------------------------------------TGTTCTCCATCTCGTCT--AACTCCAC-------ATTCCTCCCGACACATACTGCTCTCTACTCATACAAGT-----------CGGGTTTTGTTGAAAAGGGGAACAGTAAGAGACATACATCTAAGGTACATCTTTAAATTACTATCACTCTTTTCTCCCAGGCAGAACTATTATCTCCCCTCTGCTGCCGTTGTGCTTTGAGGTGTTAGGATACAGGATATTCATCTATCCATTCTCCTCTATACAGAGGGAACTCC-----------AGGAACTG------------------------------------------------------------------------------------------------GAAATGGGTACGTGATTCATT-------------------------------TTAGTGTCTC---AATAGCAAGCAGAATGCCTGGTAGT---------------------------------------TTGGAGGGGATCCATAAATGAGTATTGTGGATTGCCAAACTGAAAAATAGCAAATTTATTCTACATTTTGGATGTTCATCAGAATTTGAAATATATAAACTTGACTTTCTAAAAAGGTATTTCTGTATATGTGTTGAGTATATATTTGTTTTCCATTTAAAA s bosTau2.scaffold2029 91320 2206 + 145124 CCAAGCCCAGGAGCATGTTTGCTAAGGGCCCAGCTCCCAGAGCTTCTGAGACTCAGTGTCATTTGTGTCTCACGTGTGCCTCCTTTGACCAAGATGAAAATTCAAGCTTC-CTTTCTGAGTTTAGTAATCTCATGTTACAAAAGGGTCTAAGGAGATATAAGCAAGAATAATCAAAACAGCTGTCTGTGGTTCCAAACTAACAGTTCTTTTTGCATTCTTGGAAGCATTCTGAAGATTCTCTAAAGTCAACTAGCTCTCTTCTGCCTTAGTTAG--------------------------TCAGGGCCTCAGGGTACACTTTGGAT--ATTTCCTGCG-------CTTGCTCTCCTTAGCCACTCTATGAGAATTTCTATGAAGATAGAGCAGTTCTT--AAAACTACCACTAGAGGGAGGAAAAGTACAAGATTTGCCTCAA-GTTAAACCTG-TAGTTTTCTGATTCCTTTTGTACTTAATCCATCCTTTCAATCAGATGTTACAAAACATTTTAGCTTTTAGATATACAACTATTCTATATTTACCTTGTCATC--TGAATTTTTGTTGTTGATATAATTTGTATAAGATCAAAACCAAAAGTTATGTTTCT----GTCCCTACTATTACa--tattttaatatattcattaatttttataatCTATCTTTGGTATTTTAAGGTTATCCAACCAAA---CATACAATTTTAAATTTTCAAAAGAAGATTATTTTCTTTTGAAAAATACATGCATTCATGACTAT-CACCAAAATGCATCCCATTCATTTTTTTCATGATGTAAAGAGAAAATGTCAAGGTGATAAAAGCAAGTATTATACAATGAATTCAGAAGCACAAAAGGAAGTAGTTT--TGGTTTCTTGCCTTCTTCACTGTCTGAATCCTTGCATACCTCGCTTTACAGAACAGTGTTTGTGGCAAGTCAGCTTCAAAATAAAACTTTGTATTTAGAGTTAATATAGTTCTTGAAAGTGGAATCATCATACTGGCAATTTTTTAGGATAGATTTGCATTAATATTTTAGCATTACAATTATGATAC-CATTAATGCAAAAACTCTTAAAATACATTTCAAAAGAAATCTATAACTAATAAACACAACAATACTCAAAATGACTCACAAATTATAAAAACGATTCTGCTTTCACAGCAGAAATTGTTCCCTCAGTGGAAGGTTTCCTAATGACTCACCTGTTCTATATCTATATCCTTAGAATGAACCTTCTAAAACACATGATCACATTAGCTGACTGCCTGAAGACTGGATATTTCCTCACTGTATTTGCATCAAGTTGGAACTGTTTTCTGGGCATTAAAA-CCTCCACAGTGTGGCCTCCTTTTGGCCCCTGTTTTTTATGGACTCTCCATTTTAACTTC-ATGCTCTAGTCCCATAGGACTGGGTAAGAAGCCCTAAACACTCCCTTCCCATCCCTATACCTACTATTTCTTAAGAAATAAAAATGATTTTtaacatttattgtattttaaccacctgagga---gccactgtacaaagtgttttccatactgaccgctcatttaatcttaccccaaattctgatgggagtgtgtgtacgagcttcacattatacacaaagaaactgagagtgagagatgagcagaaactgcccagaagttacCCTTCATGTGATTTCAAAGTTCACTCACGTAATTCACTCTGACA--TAATGTTTACCATCTGCACACTTGCATTCGGCTATGGATTTTGCGCTAAAGGAGAACAGAGAGGGA---GCAGC-AAGGTCTGTC-----------------CTTTCCTTCCAAGCAGAACTGTTACCTCCTCCATGCTCCTGGTGCCCTTTGGGGTTCCAGGATGCTGGTTACTTATATATTCATACCCCTTGGCAGAACGGGGCCTCCTAGAGGCTGGAGAGAACTGTTGTAGCCTTagtgaaagtgaaagtcactcattatgtccgactccttgtgaccctgtggactatacagtcgatcgaattctccaggccagaatactggagtgggtagcctattccttctcaagggatcttcctgacccaggaattaaactggggtctcctgcattgcaggcagattctttaccagctgagctaccaCCTGAGCTACCAGGGCTCAGACGGTCACATCAGAGGGGATCTATAAGTGAACACTGT--------------------------CCTATTTTACATCTTAAGTGTCCATCAGATTC---AATTCATGACTTTATCTTTCTGCCAAGCTATTCTTCTGAAACT------TACACATTTACTTTC----TAAAA a score=7534 s mm7.chr19_random 993963 747 + 2598976 CTTACTGTGCTTACTATAGCACGTGTTTGCTCAGTCAGGGTG----------------------------------CTAAGGTA-----CAG-ACTATTTAAACAGAGTGAGCCATTTAATGCTTACAT--------------------------------ACAGTGCCATTGAATGAACTCTAAAAACAGC-ACGTCAAA---TTGCCTCTGCTCTTCACACGGAGAGCTTCCTCCAGC-----------------------CTCTCAGGATCA-AGGCTGTATCTTTGCTCATTCTTGCATTTAGAATTTCACTGTAGAAGCAAGATGGTAGT-ACCAGCTTACACCTTGATCCCAGGACCACTAGGCATCTCCTCACCCACTTT---------CCCTTTGTTCAATGGGAA---AAGATATTCCTCTCCAATGAGTTACAAAGTGGTTCATAGGTCTGTCTCTGAACTGGCTACAGCTATGATATTTATAACTGCATTGAAGTTATAAC--AAAAGACCCTTCCATATGTCAACCATAAATGTCCTCCTGCTCTTGGACATCACTAAAATATAGCTATGTTTTGCATTTACTCTGTATGTCAAAGACTTGGAGTTAT-AATGAGAGATGGAATTT------------------------ACAGGTAGTATATTTAGCAAACATTATCAAGGGAAACTACTGGCTAATTTT------------------------------------CCATATATTTT---------------------------AAAAACACATCTGTTGTCAATTC----ATTTTGCATTGTCAATTAAGGTTCTCAGAAGCTAGG-TACAAATTCCATGTCTTTGTGTGTTGCAACGTACCTGATT-ACAGTGAACAT--AATTAATATTCAGCTGTTTGAAAATGTATTTGCTTTAAGTTCATATGTCTATT s bosTau2.scaffold2029 93631 925 + 145124 ctcccagagcttgctcaaactcatgtctaccgagtcgatgTGAATATATTAAGTGCATGCTTTATTTTTTTCCCTTTTAAAATATCTGGCAGTATTATTTGGAAATATTGGATC--TGAATGTATGTATGTTTGGGATTACttataaatttttaatttataaCACAGCCATTCAATG--TTCAAAAGACAGCTACCTACAAGATTGGCCTCAACTCCTAGGGGGCATACTTTTCCTCAGTGGCCATTGCCCTTCCCTCAGTCACTCTCAACTTCACAGGATGC-TCCTACCCCATCCCTGCAGTGAGTCTCCACTTCTGGAAACAAGATGGCACTGAGCTGCTTATA------------------TGAGCCTGTCCACACACCCTCCTGCATAGCACCCACAATCCAATAGGAATGGTGGGTTTCCCTTTGTAAGGAGCCATAAGGCACATCATATGCCCATCTCTGAGCTGGCTCCAGCCAAGAT-TTTATAAATGCAGTGGTGTTGTATTTGAATGAACTCCTCCTTATGCAAGCCTTGAAGACTTTT---CCCTTGAGCGTCACTAAAAAACAGCTACGATTTGTATTGATTGTGCATGTTGAGAAGTTAGTCTTATGAATAAGGGATGAAGATTTGGTGAAGAACAAAAAAGACCACAACAAATCATCTACTAAAC-AGCAGAATC-AGGTAAAATGTTCACTAATTTTTTTGCTGCCAACTCAGTTTCTAAAACCATTAAGTGGCCATAGGTTTTGTTTCCCTCTCAGGAAAAAAAAGAAAAAAAAGGACAACTGCTACTACTACAAAGAGACGGAAGAGAAAACAAAGCTTCTCGAGAGCCAGGACTCATCTTCCATTTCAT--TGTTTCACAGAATGCCTGATTCACAACAGATGTTGAATTAACATTTAGCTGTTTGAAAATGTATTTGCTTTTAAT--ATAAGTCTATT a score=4312 s mm7.chr19_random 995985 499 + 2598976 tagcatttgaaatgtaaatgaagaaaatacctaa--ttaaaaaTATAAAAATTTTAAAGGACATTTTTAATCTCTAAAAGCATAGTTTGGA----CAGAAAAAAAACTTTGTCCAGAGGTGTAGAACTGCACAGAGCACAGCTGCTGGCAGACCTGGTGCACACATTTGTATCTT---CCAATTTCCAGACCTTTGCTTATTATTTATATCCCTCTTCACTAATCAGCTATTGGAATATTTTCTTTTTTTCTTAGCATGACAGCTATGTGTGTATCTATGTGTGCTTTTAAATGACTTAACCTCAGAAT-TTTAATTAATA----TTGCATTTATAATAAAGTTAACTCAATGCAACGCTCTCAATATCTAAGTGAAACCCATCATCTATGAGCTTTATGGCTGGCTTTGT-GACACTTGTTACCATACCTTTAGTAGTAGCAACTTCTAAATGGAAGT---ACAGTTTAAATGGACACAGGTAACAAAAAGAGGGCTACAGACAAATCCTGTAATT s bosTau2.scaffold2029 95021 463 + 145124 TAACTTTAGCAAGGAAAAGGAAAAAGAATCTTACATTCAGAAATGTAAGA--TTTAAAGAACTATTTCAACCTTT-----TCTGGTTTTGAGATCCAGAAAGTGA-----GTCAAGTGGGTTTGAAT---------CACAGCTGGTCATGCAGGTCATGCCAGTGTTTTCATCCTAACTCCATTTCAAGACTACTGTTTATTACCCTCATGCTTCTTCACTAACAGAATAT----AACTGTTGTATTTTTTTAAACAGAATAGACGT-------TTTCCGTTTTTTTTAAAACTACTTCA----AGAGTATTAAAGTAATATCTTTCTCATTTATAGTAAAGATAAATCAGTAGAAACTTGCCATTCTCTCCTTGAA-----------TTAAACTGTATA-------TTGTGGAAATCTCACAACTTAGCCAGGAGGGTAGCAATTTCTAAATGCacatgaaataacctaaatgtccatcaatggataaagatgtggtacatatacatcatgggatt a score=8028 s mm7.chr19_random 996579 974 + 2598976 GAACAGAAATGTGTTCACTTGAATAAGTAGTGAATAATATGACCCTTG--TAACATACGTGTGTACATCCCCTGGATTTGGTAGCTGCACAGTGCAGGACAGAAGCTCTGTGGATTCTAAGACTTTCCAGTGTTTTGAGGCC---AATAGCATCCCATGTGCGATTGTGGTCTAACCAGAA-GTGAGCCAGAGCACAGTGC-----------TTCCAAGACAACTCGCACAGCATTCAAAGAGAATGTC-AGTAAGTGACTGGGGTGACATTTGCTTTGTTT--------GTAGAAATG----ATGTACAGAAGACAA---------------AATAACCCAGTCGA-ATTTCACTTCTTTACATACTAGCTGGCATGTGTTCTACACACGTTAATTGGATAAGAGATGGCAACAGTTAGGAAAGCTTTTT-CCCCACC-AGTAATGTTTTAATGAAAAAGACTGTGATAAC----AATTGAGGGAATGAAACGT-------TGTTGAGAG---TGTCTCAATGTATGCTTTTAAGAGGGAACTTATGCCATCATGCCATTAATGTCTTGAAAACAATTGTGAAATCTTTTTATTCCTCTATACCTCATACAAATCTAACTCAGAAAGTACTTAATACATTTTTTTCCCCAGAATAAATGGAGAGGAGAGAAGAATGAGTTCTCTGGTGTGCTGATGCATGTCTGTTATCCTGATATGTGAAAGGTTGAGGGacttgagaggctggagcatgaaggtcatgagttcaaggtcaaccttgggtaaataaggagttccagccaagcctggactacaCTGCACAAATAGGTCCTCATTTCCATGTTCAGTCCTAAGGGCATATGAGCTCATTTGTTGACtttaaataaatatatataaatCCAGAAACAATTAGAAGGTGAGTGTGAG-TTTTATTTTTCTTTGTTTTGATCAATAAGTATTTGTTGATATTTACTATTTGCAAAGAGCAATCAAAGAAATCAGACTGTACCTTTCTCCTAC----------AGTTCATATTCTAGCAAG s bosTau2.scaffold2029 96272 867 + 145124 GGACACAGATGTTTTTCTTTGAATGATTAGTACTGAA---AACTCTTAATTAAGATATGTCCATGTACTTCCTGTTCTTAGCAAGCATCCTGGGTAAAATACAGTCTTCCTTAGACCGGACACCTTGCAGTTTCTCCGGGTCTGGATGAGTTCTCTATGGG-GACTAGAGTCCAGAGAGAAAGTGGAATACAACATGATACATGCCTACCTCTCTCAAGTCACTACTGCGAACATTAAAACAACGTCTCCAATACCCGATGCTGGTAACATTTGCTTCTTTCTCCTAAGAGTA-AAATGCAGCATGAAAAAATGACAATTTTACTGGCTGGATAATAAACCAATTGGGATTTTAGTTATtaatacagtaactggcacatacccaataactgtttattgaataactgaTGG----GGCTTGATAGACTTGCTACTCCATAGAGAGACACCTTGATAGAAAAGGAAATGAAAGCTTAAACCTGGAGGACAGTAATGTATTCACTTATTGATAGATATGttttaatatatatttttaaatGACAACTTATGCAATTATGTCATAAACTCCTAGAATGCATTTGCCAAGG-TTCTTGGTCCTCTATTACTTGC-caggcctgactcagaaggtgcttcatacatgtttattt----aataaatgaaCAGAAGA-ATGAATGAGCCTACTGAT----TGAT----------TACC-------------------------------------------------TAAATCCAGAGTCCAC-------------------------------------------------------------------------------------------------TGAATTTAAATGAATGTATAAGAATGCAGATGAAACTGAAA----ACTCTGAGATTTCATTTTTCTTTGTTTCATTCAGTAAATATTTGTTAAAGACCACTATTTGCATAGAGTATTGAAGGAAGCAGCTCTCTCTCTCTCTCCTCCCTCCTTCTGGGGATTACATTCTAGTAGG a score=13712 s mm7.chr19_random 999963 524 + 2598976 CCGTTTTCTTTACTACTAAAAATTATTAAAGAAAAATCAAATCAAATCAAATGAAAAAGT---GTTAAAGTCTTTGAAGACCTTGGCACGGTAAAGGACC---CAGACATTATTGCTTTAAAGAGAGAGCGGTT--TTACCGTGAATCTTGCAGTG----TAGCTGTGGTCAGATTC-ATTAGGAGAGATGCACATACAGATATCTGTAATATAAATTATTCAGGATATACAAACTCTGTAACCAGAATGTAAGAGGC--GCCATTAAAGGAATAAGCCCTGTCACTATATTTTCTTTGACCAAACAGGAACAAAACATGTAAGTGCCTCTAGGGCACGAGTAATTTGCTACTGCATCTGCC-TTTGCCTTAAGGGCCATCTTTCTGCAATCTC--------------ATACAAGGTCACTTGACACTC-CTGTAGAACACTAATGG-GCCTAAGTGGCCCAGTATTATCTCTGAGTAGTTGTAAATTTGCTTGCTTTTCTCTGAGGTGGATCTGATAATGCTGACTTAAAGATGAACTCAGCTGTCTAAATGTGT s bosTau2.scaffold2029 98715 534 + 145124 CTATTTTCTACATTGCTAAACATTTTTAAATGCAAAAAAAAACAACAAAAACCCACAGTTTTAGGTAGACTTTTTGAAGACCTCTAAATAATGAGGACTCTATCAGACACTGCTGTTTTAAAGTGAGACTATTTATTTAGCTTGAGGC---CAGTGATTTTAGCTCTAGTCGGGTTTTGTTATGA--------CATATCTATATGTAAACTATAAATTATGCATCATTCATAAATTATACATAAAATACATTAAAAGCCAGCTGCCCAAGAAGCAAAA---GTAGCTA-ATATTTCTTGACCAAATGGAAAAA-------TTATTGACTCTAGGGCAGGAATAATTTGCCATTTCACCTGTCAGTTGCCTTGAAGACCATCTTTCTACAATTTCCTGTCCCTTAATGGATACAGTGTTACTTGAAACTCACAGCAGATCATTAGCAGTGTCTAAGTGCCCTCGTGTGGGCTCTGAATGGCTGTAAATTTGCTTCAGTTGCTCATAGGTGGATTTGGTAATGCTGACTTACAGGCAAACTCAGCTGTCTAAAAATGC a score=4639 s mm7.chr19_random 1000774 256 + 2598976 CTGAAATATAAACAAGGCATATCTTCACACTTAAATCTAGCTACTCAACTGAATTTTCTATTTAAAACCAAGCCTAT---------------------AAGAAATAGCCT-------GGTATGGAGAT--ATACTGGAGATTA--------AAGTTGA----CTGTTGCCGACTTACAATGTAGCATTAAACTCCACAGTCACCTGTTAAGCCTA-----------TGATTT--------TTCTCTGGAATAATAATAGCAACAACAATAACAATAACATATCCTAGTTCAAAATATTA---ATAGAAAT---AAAAGTTTAA s bosTau2.scaffold2029 99480 308 + 145124 CTGTAATGTAAATAAAGGATATTTTCACAA--------AGTTACTCACGTATATTTCCAGATTAAAACCAAGGTCATAACAAGATCATTACTATGGTCAAGAAATAGTATCTATCAggttaaaaaaatgaattctggagataagacactctgagttcaaatcctgctgctgacttacagtgaagccttcgaccccttggctgtctgcaaagtcaagcaatccctcttaatttcaaattcctcatctggaa-------agtcaagataataacagtaatagatactaattcaaaggattacatgaagaaatgtaaaacgcttaa a score=4043 s mm7.chr19_random 1001640 262 + 2598976 GCTAGTTCATAATCTCCTGCCATGAAACTCAGACAACACTACATCACTTGTCTGCGATGAGGCCAGGGTTTTTCTTCCCCCAACTCAGATATCTTAGATCA-----CAAGAGAATTCA-CCCATATAGTCACTGAGTACGTTTCCTAAGCTAAAAAAACACAGAAAGATTC-------TATCTTATGCCTATCTCAGAGCC-TTTGAAACGTCAGACTGTTTAC-TCAAT-------GATTTATTTATAGGATGTGGCAGGTATAGTCTTTGAGAGACAGATAA s bosTau2.scaffold2029 100524 267 + 145124 GTTATTTCATAATCTCCTTCTGTTGCAGTCAGGCAAATCCCAATCACCTACATATGGTGGGGCCAG-------CTTTC----ACTGTGATCTCTGCACTTAACATCCAAGAGAAAACAGTCAATATAGTCCTCGGGAATTATCTCT------AAAAAACACACAGTCATTCCACAGGTCATGCTGAGCATATGTGGTGGCCTTTTGGAATATCCTACCAAGGGCACCAATGATAGAGGATGTGTTTAGAACAAGTGGCAGGCATAAACTTTGAGTAACAGATAA a score=5331 s mm7.chr19_random 1002561 252 + 2598976 gaaaaaaaaaaaaaaaagaaaGACATATTGGGACCAGGATAGAGGCAAAGTTAGGAAAAAAAGATCATATATGATTAGAAACCAATCCCATTTGCCATCAATAATCATTTTAGATTTGTTCAGAATGCCATTCTATATAGTATGAAAGGGAACAG-GGCCATGATCTCTTGGGCTA-GTTAACCAGTTAACCATTCTTTGATAGGTTACTCA-----CCTCACAAAGT--------------------------------TACCTTACCTGGAAAAAGGGGCTTGACAGTT s bosTau2.scaffold2029 101378 278 + 145124 gaaaataaataagcaaataCGTATATCTTAAAAATAAAAGAGAG-------------AGAGAGAGCGAGGATGGGTGGCATCCAAGCCCGTCCCTCATCAGCTGTCACTTCAGGTACGTTCAGAGTCCCATCCTCTGCATTCCGAAAGGGAAGAGTGGCCATGATATTCTGTGCTACCTCAAGTGGTTAGCTTCTCtgtggtaggcagaaaaatggtccccacaaaatatcaggtcttaattcctggaacgcctaaatgataccttatttggaaaaagggtcatcacagtt a score=50114 s mm7.chr19_random 1003503 3248 + 2598976 GTGAATATAGAGGTAAAGA----AGTGAAGCAGTCACAAACCAAGAAAATCCAGAAGCCATCAGAATCCAGAAGGCAGACAGAGGATTAT------------CCTCCAGA------------ATCAGGAGTGTGGT-------CTGGTTGGGAATATGACTAAATGGTATTCATTATGTCTGGGCTTTCGT-CTGGGAAAGAACAGATTTCTCTC-----AAGCCAGCCTGCTTGTGGTAGTGATTTGTTATGTAGAATATAGAAACTGAACACAATAGCAAAAATACTTCTATTACCATTTAATTATTTTATATTTTCTTGGCTGTGT--------------------CTGCTCCCTGTCTCTACTTTCCTAAACTCATTATCAGACGTTACAAAAATTATTTTTTCCTTTCTGTTCAGTCAGAATACAC--TGTGTGCTATTGTAAACACACATTTTCCAGTTCACTTTTGGAAACTTCAGTCATAAAGCTATGTGTATATTAATCATTAACGAAGTTCTCAAACAAA-----------CATGGTGCAAATAT----CAGGTTGCATGGCAATTAAAGCAAATCATGATCCCCGTAAGAGATGCAGTTTTCAAATTTATTATATGAAAATTATGTACTACAGATGTTCAGGTTTTAATGTGTATCTCTCTAGAAAATGACAAAGTAACTGAATCACAAAAGGCATGAGACAGTATATGCCAGAACAATTTGAATATTTAAAACACGGTGTCTGTGCT---CCATTAGAG-TTACACAAATAGAATCAAACTCAAAGATGATCTGATTCGAGTAATGAAACCCTG-TGAGTTGTGAACTTCCAGGG-GTATAAATGAAACCTGAAAATCCCATCTGGGCAGCAGGTTGTAAATTAGCTGTGTCCGTGCCCCAAAGCATACCTCGGATACCCGAGAGACCAGGGAAGGTTCATTAAGCATTCCAGGGTACCCGTCACTGTCACTAATGAGCA-GCTTTGACAATGGTTCTGTATTTCATGCACACATGAAGCAATATGCAAAAACCATACTTCTCGA-GCTTCCATAAAGTCTAGC--------GGCTGAGTC-------------CAGGTCATGTGGGCCTCCTTGTCTGTATAATGACAGACCCCAAATTGGAGATCTCTCTTTAACCTTCAAAGCTCTACGAGTTTAATACACTGACTCACTGTGTGAGCCTC--TATTATGGGATGTC--TTAAAGGTTTTCAAGCGGATTAACCACACAGTACTGATGTTTAGCAA------CAACCAGAATTATCGAATTACTTGCTGATATGGCCTAAGTTCGGGTGACAGTTTGTACTTGG-----AAGTTCTTCTCTTACAGGATGAAGCTGTATCTCTTGGCATGTCAAGGACACA----CTGGCCTGTGTCCATGTTAGTCTCCTGTTAATTTTATTCTGACTATACTAAAGTGTGCTTGGCAACCATGAGTGGCAGCGTCACTATGCAGCGTCTCATCCTTC-CTGACTCGCCTACTTGTTTATCTTCAGGCTACTGCTGAAGTTCAACACAAGCTCATAACATATGCTATAGGGCGGGAT----GCTTTGTAAGAGCAAGAAGAGGGCTCCAGTTCCTCTGTGACCACAGAGATGAACTCATGAGAAGAAGCTTGGTGTAGGAACGTCTTAATTTTGCTAAGAAATATGCtaatcccagcacttgggaagcagaggcaggtggatctctgagttagaggccagcctggtctacagagtgagttccagaacagccagggctatacagagaaaccctg---tctcaaaaaaaaaaaaaaaacaaaaacaaaaacaaacaaacaaacaaacaaacaaaaaaaccaaaaCCTGCAAAATGTCTGAATGCAGAGGAAAACCTGGTAGCTATCTGTAAAATGTTATGGAATTTCAATAGCAATCTGTCACTTTACAGTTTGGGCTTTTCAATGAAAATTTACAGGAAAAATATCATCTTTAAGAAAACTGTT--CACTTTAAAGCTATGGGAGGTGAATGGCAAGCATGTTTAGTGCAAGAAA----TGTATGAATGGTAGCGTGGTTTCGATACTTCTGGAATGACTTTTTGAAAACTGTCCATTCGAAGAGAGGGCGGCATGATCAGATCCTTCATTTCTACCCAGGGCGGAGGCAGCATGGTTCTGCTAGCAACCATAAACCCCAC-AACAGTAAACTGCTCATTTGTGCTTCAGGTGGTAGCGACTTTATCGGAGAAGCAGCAGGAAAGATTCTGGACCTGCTCAGCTCACGGTCTTTCCCCTGCTGACTCGCTCTTCAGTTACTACGGAATGTACTC-CTTAACTATGTGAGGATTGGAAACGAAGCTCA-CCTAGTGAATGCTA-----CTCTTACGTCTAGTCAAGCATCGCTCTGGACCTTCGGGATATTATGC---TCACCTCTCCACAAAAGAAAACACTGGCGGGTTTTTTCAATTCATCTGTCTATTTGTTAATCGAAAAT-TTTGACTAGAAATGTAGTTAATAAGCTGATTAATGCTGTCTTCATAAATTCT-------AAGCTTTTGGTATAGCTCAAAGC----ATTTGGATATGACAGGCGCTTATATGTGTTTAATTTCT-ATTTATAAAGAATACTATATACTACAAAAT----TTATTATTAAAGAACAGTAAATTATTTTATCCTTTCTCTATCTCCTTGTTT-----Caaatttacataaaaa--------------------------aatatattttaatGAAAAGAAACTCTTCCATACTGTCTTCTGAAGTTCTGTCTGTCATTCTGTGGGGCACCAAGAGATAATGAGACAAATGTACACAAGCCTTTCCCTGTTGCTGTTGGGAAAAGTTTAAGA------AGTTGCTGATTTATAA---------TTAATTTT--GCGATGAATTACCTATGACTCT-AGACATGT----ATCATAAA-TGGCTTcacttgccagctatgcaa----gtagggagatatctga-----ctgtgcct--gtttcttccccaataaaatggaatt-ta-taaaaattaa-----ttcctaacaaagttatagtgaggttgcacaaactaagaacatgtaTGACATTTGTTTCTTGTGATTCCTAGTATTTTCGTTATCTTAAATGACTATTGTCTAAAGTTGTTGCATACTTAGAGATATAGCTTTGCTAACACTATATTCTATGGGCATGGTATACAGCTCAATTAACATCAATCACATAATTA-TATAAAAGCATTGAGGTTGTACTCAACATAAGACTTTCATAAT--TATTTCAAGAAGGTTTTAAAGTA--TTAAATCACTTGTATAATATATTTTGAGGATC--TTATATAAAGAAGGTTTATTTCTATTACTATTGCTTATTCTTATTAGGGCCTGCATGCCC-CGGACCCCCAGTA------------TTCTAA-------TCAACATAGTTTTAGCAAGTCA s bosTau2.scaffold2029 101804 3150 + 145124 gtgagggcagaagcaaagattaaagtgatgtggtcacaagccaagggatgccagcagccaccaaaatatggaaa--aggcaaggaatgattgttcccaagagcctccagagagactgccaatactgagcttgtgacacgatacctgactgag--tctggtcaaattgatttcat-acttcaaggctccagaactgtgagaaacctaatttctcttgttttaagccatccattttgtggtagt---ttgttatgcccactccaggaaattaatacaACATCATCACAAGTTTTACTGTCACT-AattactacagatttccttgattctattactatagatttccttgattctaCTCATTGTTTGCTTCTTCCTGAACTCATTCTCAGACATTACAAAATTATTATTTTCCTTTCTGTTCAGTTAGATTACGTGGTGTGTGCCACTGTACACACAATTTCTTTGGCTCATCTTCAGGATGCTATGTTATAGAAACA-ATGTATATCAGTCACCAGTTAAGTTCCCAAACTAATTATTTCTCTTCACAGAATAAATATTTATCAAATGGCATGCCAATTAAGTCAAGTAATTATACCCTTAAGAAATGCAGTTTTCAAATTCATTAGCTCAAAACTGTATACTACAGATGTTCAAGTTTTAATGTGTATCTATCTGGAAAATGATTCAG---CTGAGTCACACAAAG---AAGACAAAATATAATA-AACTATTTGAATATTTATAACATTGTGTTTGTCTTTTACTGTTGGAGTTTATGTGCATAGAATCAAACTCAAAGAATAACTGAAATGAGTGATGAAATAATGTTGAGTT-----CTCCCAGGGAGTAAAAAGCTGCTCTGAGACATTCATGTGTGCACCAAAATGTAACTCAACTCCTTCACTGTTCCAAA---------TGGTACCCTAGGGACCAGAAAAGGTACATTAAGCATCCCAGAGTAT------GTGTCACTAAGGAAGATGCTCTTGTACTGGTTCAATATTTCATCTGTGGGTACAGTAACACTGAAAAGCCATATTTCATAACATTTCCAAGAAGTCTGACTTTAAAATGACTATGTCTGcctctctagaacagctaac---agtttcctctcctgtaaaatgaaggcgttggacctgggtatctctcttctatttctaatgttctatgCGAGGAAGATACCGATGCAGTGTGACTACCCTGGTATTTGGGGGAGTTAATCAAAG--TTTCAAATGGACAGACCAGGTGGTGCCATGACTTAGCAAGGAAAGTAACCAGAAT-----AAGCATCTG--AGTATGGAC--AGTTCAAGTGCAGGGTTGTGACTAGTTTCTAGGTGTTTCTTTTACAGGATAAAGCCTTTTCTGTAATCTTCACAAAGACATAATATTTGTCATATACAAGTGTATCTCTTCTGTTAATTTCATTCAGGCTACATCAAA-CGTGCTTTGAAACAATGAGCTGTGTAGTCACTTGGCATAATCTTGTCCTCAGTTGACATGTTTACTTATTTTTATCCAG--------------CCAACATGAGCTCATTTCTCATGCT---GGGTGGAATGTAAGCCTCACAAGTGCAAAAGCAGAGATCCAATTCTTTCACATCCTTAGAGATTGTCTCATAAACCAAGGTTTTGTATAGAG------------CTCCAAGAGCTG-------CCTAACACT------------GAAGGCTTAGCTCTG-------------------------------------------CAGAGAAATACACAAAAAATTTGAATTTTCAGACAAAAACCGAAAAT---------------------------------AAAAAACC----CCTG-----TGT--------------------------------TAAAAGAAGATGGAGTTTTGAAAGTTACATGAAATTTAAAAGTTTGAAATTTTATAGGAAATTTT------AAAATA------TTGAAGGCAATGTTACTAATTTAAAGCTTTGGGGGATGAATAGCTAAAATGTCAAAGGTAAGTAAGTTTTTTACATATTGTAGCAT-ATTTGTATTCTTTTGAAATGACTTCTAAAAATGTTTTAAATCAAAGTTTGACCAAC---ATCAGGTCATT--TGAATGCCCATGTC----------------------TAAAAACAAGCCTCACTCACAGT----TTGGCTTTTCTGTTTCAGGAAGTATCAACTTTATCAGAAGAGAAGTAAGAAGGATTCAGAGCCTCCTTTGCTTGCCGGC-TTCTCCTGCCAACTT-TGATCCAGGTGTTGCCTGATGTGCCCGTTTGATCGTGCAAAGATCAGAGATAAGCTTCAGGGTTGTGAAGGATGACGGTTTCTTCTATCT--TCAAGTATTTTCTTGCATC-TCAAGCAATTCTGCCCATCAGCTCCTCACACAGACAAATTTTG-------TTTTCAATGTGTCATTCTATTTGCATACCAAAATTATTTAAATATTAATGCAACTGGTAAATCTATAACTGTTGTTTTGATAAGCTCTAGTTTTAAAAACTTCAGCATACCAAAAAGCTATTGTATGCATATGTCA--TGTTTATATGTATATAATCTCCAATTCATGAAACTGCATGAACACTGGAAAAGGGAATTATT-TTAAAAGCTCTTAAATATTTTAGTTCTCCTTCTAGCACCTTCTACAAAAACAAAGAAAGATAAAAACTACAATAGCCAACAAAGCAGAATAGAACAAATGACAACCAAAAGAAAACCTTCTAGACTGTCCTCTAATATTCTGAATTACAATT--CAGAGAAGCCAAAGGTACTGAATTAATATTACAGAAACTGTTTCC--TTGAAGTTATGAGGTATATGCAATATTCTATTTCCCGACCTATAAAATGAAGTGTTACTTTTTGGTAATGAATTACCTCTGACTCTCAAGCATCTTTACATTGTAGACTAggttctcttgctagctatgtgacctggagggtggttatttaacttctctgtgcttcagtttccccatttgtaaaatggagttatattaagtatcaagtgtcttcctcatatggttttatgG----------AATCAGGCATATGTA------------------------AGCACCCCC---ATCTC------------------------------------------CTTTGCT---ACAAAATCCTATGGACATTTTATACTATTTAATTACTGCCTGTGACCTAATTAGCATATAATCATATA---TTTATTCAATATGATACTATCATAATCATATTTCAAAGAGATTTTGAAATATTTTGACTCAATGATATAAAATATTTTGAAAAGCCTTCATCCAGGGAAGTTTTATTCCCATTATTATCTCCTATTTCTAATAAAACCCATCTACCCACAAGTCCTCAATATAACCAGTCATGTTTCAACTGCAGCCCAGTACTGCCTTAGCAAGTTC a score=20349 s mm7.chr19_random 1006751 748 + 2598976 ACATTTAATTCACCAGCCCATGCACATCCTGGAGTCTCTTTAGA---------CAACTCCTGCTTTCATCAAACCAAAATGAGTATCTTTTCTTGCTACTGACTATATAGATTTCAGATGACTTCTGTCCAAGCTGGCGGACCTTGTTTTTCTAATTTCTATATTAATTAATTTCCCCTCTAACTCTCTCCATTTTATGAAATCTTTACTCCTCATTTGCTTGAGATACTTTCTAGAGAATAAGATCT---TTTT---TTACAGATTTGCTGAAAACTTCCTTCAGGTAACATCAGGTTAAGATGTTAAAACAAAAGCAAGATTCAAATGTGAGCCC--------------------------AAG---------------------------------------------TTTTCTTTTTTTACCG--TGTTGAACCAGTAGTTTCATACATC-CCAATTGAGGTCAATTTTCATTTTC--TCTTCAGT---ATTTTTACAA------GGGCGGACATTTCCCT-GCCATATCCGGTATATATGTGTGAAAACTGCACAATGTTAATGAATATCTAAGTAGCTGTCAGTTTTTAATTTAGATGATTCCACTATGGCAACTAATTCATTAACATTTAATTGCTCAATCTATAATTAAT-TAAAGACAAATTAGATGTAAAAACTGGTTATCATTTAGACATTCTGCAATTAGAAGTCAATAAAGAATGACATTGTTTTGTAAGCTATTGTTTCTAAGTGATCAATAAAATAGGAC------AAAATTTAAAAAGGTATTTAGAAGATTTAGCTCAGTGTAGAAAAGTGACAACCATAAGTGGCAAGCTTTTCAAAA s bosTau2.scaffold2029 105478 784 + 145124 ATATCTAGTTTACTAGCTAACTAATAACCCAGAGTCTCTTTAGAGAATTTCCACACCTCCTACTTTCATCAA-CTAAAATGAATATCTTTCCTTGTTGGTAAATACATGGATTTCAGAAAACTATTT-----GCTGGTGAGCCTTGTTTTTCTAATTTAGGTTTTAATTAATTTCCTCTCCACCTTACTCCATTATTTACATTCTT--CTCCTC-TGTGTTTGCAATACTTTCTAAGGAATAACATCAACATTTTAAATTATACATTTGTTGACTGCATTCTTTAGGTAA-------TTAAGATGTTAA--CAAAGATAAGACTCAACTGGAGgcctggcgtgctgcgattcatggggtcgcaaagagtcggacacgactgagcgactGAATTGAACTGAACTGATGACCCTTTTAGCATTTCTCTGAATGTTTAATCAACCATTACACATATCACTAATTGAGATAAATTTTCATTTTCAGCTTTCATTTAAATCATGAAAATAATGGGGATAGATTTTTCCCTAGATAGATCCAATGCATATATATTAACAC---ATAATGTTAACAAATATCTGAGTAACTATCAGTTTTTAATTTAGATGATTCCATTACAGT-----------------------------TATATAATTAATCTAAAAATACA------ATTAAAATTGACTGTCATTCAGACA--CTGCAATCAGAAATCATTAAA-AATGGCCTTA---GGTGAGGTATTACTTCTAAGTGATCACTAAAATAGAACTGaattaaaatttaaaaa-----taaaaaGCTTTAATT-----TCAAAAGGTTGTACATAAAAATGATAGGCTTTTAAAAA a score=5030 s mm7.chr19_random 1007697 347 + 2598976 CTATGCCTTATAGCATCTACAGAGTGAAATTAAACAGAAGTTTGAGAATT----ATAGACACTTGAG---TGAATAAATACACACCTTTCCCATTTTTTTTTTTATATAGGAAAAGATTCAACTCAATGATAGTAAGGGATAATAAGACCAACTGAGCTAAAAATAGTTGA-TGATATTTCATGATTACAATT---------CAGTTTGATC----AATATATAAATCCTGCATCTATAGTAAGACACCATGCCATCA-TTTGGTGGTAAATGTTTT--AAATAAAATAAAAAGATTAAATCATATGCATTGAGTTGGGGTAAAGGAAAACCAAGCCAGCAAAAGTGACCAGAGG---CATTAAATACATTCAA s bosTau2.scaffold2029 106317 350 + 145124 CCAAGTCTTGCTGCAGGTACAGAGTAAAAGTGAACAGAAAATTGGGGAGTTCAGATAGAAACTTAAGTCCTCAACAGATTC-TAATTCTACCACTTAACT-----------GAAAAGTTCAACCCACCAAT---------TACCAAGACCAATATCAGTAAGAACAACACATTGATATTTTGTGTCTGATCTTTGTGGCAGACAGTTTGATTATCAAATGTATAAAATAGGTAGTTTCACAAAAAATCAATGCCTTCACTTTGGTGCTAGGTGTCTTGCAAATAAAATAAATACA--AAATCCCAAGAATGGAGTTGGCCCATGAGGAAA-TAAACAAGCAAACACGAAAAGAAGACACATTAAGCATGCTCCA a score=18437 s mm7.chr19_random 1008304 1079 + 2598976 TTTCTCATTTTGTGCCATTGATTGTAGTGGTGAGGTAAGAAACACC---------CATACTATAATCTACTTTCTAGTCATCACAAAGCTATCTTAGCAG--------------CAATTTTAGCAGAATATTTCTC-ATTCATTTTAGCTAATTGTTAAA-TAGTGCTT----TATGTAAAGTTTGGAGCAGATGACACGTGCTGCAATTCATTATAGTAAGTGTCACGTTAAGGAAA----------------------------------------CAACCCTC-----CCCCA----GGAAA-------------TCCTAATTATTTCACATTCATTAACTCGTACAGTAAAACATTCCATTT--ATTGCCTTGAT-CGGATGTCAGATGCTTCTGGATAGTTTATACAGTCATATTCACTTTTAAAGTGAAAAATATCACTA-------------------------CCTGGATCATTAGTT-----------ATAAAAATAATGCTTTTCT--AATTGATTATTACCGATGTAGCTCAG-TACAAT---TTACTTTTCCTATAGTGAGCTTTATAAA-------CTACAATAGTAAGTTTTATATTTTTAAAGGCAGAGAGACAGAGACCAAATAACTGCAAACGTTAAGGAAGCAACAGCAGCCTTATCATTATTACTATTAATATCACATGCTAAGCACATATTTAATTTTCTGTCCATTACTTAAAGAGCTCAGG-ATTAATCCTATTAA---TTTTACGTATTTGCTAATCCTAA-TATTTAGTCCTATGATCA---TTACATATTAAAGGTAGCCATCTTGCCTCGTTC---CTTATTGGCATAACCATCCTGTTTCCATGGCAACAGTAGAGAAGGAACAAAATGGTAGAACCTGGCCATTTTAGATGGAAACTGATCAGGTTGTTTTCCTTTATGAGTCCTGTTATTCATGCAGATAAGAATGCGGACAGTGGGCTCTTACATACATTACACAG--CAGTGGTTAACCTTTTAAAAGCAGGAAATTCTATTTCTAGCTGGAAAAACTTCACCCTTTATGTGAAGATTTGGTACCAAGTTGCAGA----------GGGAGATTGTTtttgtttgtttgtttgt------ttgtAT-------ATTTTCTGGAACCATTTGAAAATTCTGCTGAAAAAAAAACCAGAGCAGTGGCAATCTTTAGAAGCAGACATTTATTAACTCTGGATTAATTCATTTAAAACTTTA s bosTau2.scaffold2029 106989 1209 + 145124 TTTCTCTTTTCATATGATTGATT-TAGGGGTTACATTGAAAATATCAGTTCACCAAATGATGTGTTCTATTT----GTCATCACAAAACCATCTAAACTGAATTAAATGTTTTACCATTTTGGTAAAACATCTCTTAACACATTTTCCGTAAGTGTTAAACTGGTACTTTCCCTATGTTCAGTTCCAAGTGGATGAGACCCATAGTAATTCA-TATAGCAAGTACCACTGTAAGGAAGTTTTCCCTCATTCAGTTCATTTCagtcactcagttgtgtctgactctttgtgaccccattatggaAAGAACCCCATCTTTCCTTCATTATGTGACACTAATTAGCTCATATAGTAAAAGGTTCCATTTTAGTAATCTTGATACACACAGCTAA----TTGGGTTGGTAAATTCTGTCATA-----TTTTATAAGCAAAGCTGTCATTGGATATAGTCGGTATTTTGACAGTGCTTTTAATATTCAGTTGGTAAAACCACAGAAAAAAAATTTTTTTTTCAAATGTCTTACCACTGATATAGTTCAATTGCTATTTATTATTTTTTCTATAGTGAACTTCATTAATGAAATGTTCCACCATTTAGCTTCTCATTGTTAAAGGC--AGAGACATTGATTGCATACATGGAAACTTGACAGAGCCAATAGGAGCATTGTTATT-----TATTTTAACTTAATGCTAAGTATGTCCCTAATTTTCT--------CTTTGAGAGCTCATACATTAATTCTGTGGCACTTTTTAAGAACTGTATAATCCTAAGTATTTAATCCTGTGATCATGTTTATCTTTGAATAACAGTCATCATCCCCCCACCACTTCTACTGTCATAACCATCATGTTTCCATGGAAAC--TGGAGAAAGAATGAAAAGGTAAAACACCTCCATTTTAGTTCTAAGTTGACAGTGTAGTTTTTATTAGGAGCCTCAATTACTCAGAC-TATAAGAATATAGACAGTGG----TTTCATAAATTATACAGAATAATAGTTGATCTTTTATAAATTAGACACCATACTTCTAGCTAAAGGAGCTTAACCCTTTCTGTTGAGAATTAAT---TGTTTGAAGAAGACATTTGGGGGAGTTTTTTTTTTCCTTCTTCTTTACATTTTATTGTATTGCTCGAATTTTCTATTACCATGTAAAA---------TAAAATAAGCAAAAACTAAAATATTCTTTACAAATAACTAGTTATTTGTTATACATAAATGTATCTTAATCTTTA a score=5681 s mm7.chr19_random 1010804 311 + 2598976 TTTAATAGAATGCATTTGAACTTTCCAAGTTCTCTGATATTTGAGCTGTTCTTATAATTTGAATATTTAAATTA--CTGCTCTTTGCCTAAACAAGTTATACTGATAAGTAACCAGTATCCAAA---GAATGAAATAATGAATACAAATTAGATTTCATTTTATAGCTTAGATGGGTTTGGGATTTTGTTGGTTTTCCTGGTCTTTAGTATTGTTAA-ATCCACTATAGCAAAACTAATTTGGAGTATTTGTATTTTCTGGTTGTTGAGAATTTTTGCAAATGAGGGATTAT--------------------------------------------------------------------------------------ATTTTACAGTAAATGGACATTGTAA s bosTau2.scaffold2029 113932 389 + 145124 TTTAATAGAATATATTTACA-TTTCTAGATTCTGGAGGATTTGGGTTGTTTTAATTACTTGAACATTTTAGTTAATCGGtatttattttgtaaaaattatatgtaaaagttattaatttaaaaaataGAATGAAGTACTGAAAATAAATAAGGCTTTGTCTTACAGTTCAGAAAAGTATGATACT-----------CCCGGTCCTCACTATCATTAGTATCCAC-ACAACAATACTTGTTTGAACTATTTGAACCTTCTAATTGCTAAGATTTTTCACAAATAGGAGCTTATACtgtgtgtgtgctgaggtgctcagccgtgcctgagtctttcgaaactccagggactgcagcttgccaagctcctctgcccatgaaattttccaggcaa-ggatactggag a score=15933 s mm7.chr19_random 1011115 723 + 2598976 TCCAATAAATACAGAAATAAGCACACA-GTATAAGCATCTAT-GTGATT-CAAG-----------TTTCATTTTCTGAAG--AGCTAACTAGGATGCAAGTAACACTG-TTACTAAAGCATTGGCTCTAATGCAGC-----AATAGTCCCCAAACGCAGAATGAGGTTCTGTTCTGTTATTCTTGCATTGATAAACATAA---TCCAA---CTTCAATCTGACCAATGCCATTCATTAAGATGATGTGAATAAGAAAT---GGTCACCTA--ATTAGTAACTGTAAAGAGAAACAAGTTGGTGAACCAGGCCCTGAAAGG-TCAAGGGAA--AGGGAAACCCCTGACCATGTCCAACCCTAT------------CAGTCACAACTGTATACCTGCA---GGGCATGGGA-----TGTTGAGTATAAAGA----TTAAGGTTTTCTTGTACCAAAGATTTATCAGCAACCATATCTTATAAAATTACAGATGAAAGAATTAATAGGTACCCATAGATAAATTTAC-------AAATCCTTCCTTGGCTTAAAACTCCCCTT---TTCTTTTTAAAGAAGAGTGTTTTGATAAAAATAGGT-AAGTTCTTAGGATGACAGAGTTGCACCTTCCAAGGGCTCAGCCAACACATTCCATCATTCC---CCTCTGACCAAATAGCAGAACAACCATCATTGTCATTATTGGATATTTTTATTAAAGGTTAAGCTTCCCAATGGGAGAGAACTTATCTTCTATCTTGTATTCTTTTTGCTTACTATGTGCTT-------------TTAAAAtatgt s bosTau2.scaffold2029 114437 791 + 145124 TTTAACAAAGGCAGAGATAAACGCACATTTATAAGCATCTGTGGTGATTACAAGATTATTAAAGCTTTCAAAATCTGAAGGTAGCTTA--AGAATATAAATGAGTGTACTCATTAAAGAAGTGACTCTAA-AAAGCTGGCAAACAGTCCCCAAAGGCAGGATAACTTTATTTTTTGCTTTTGTTTCATCTGTAAACATAAAACTCCAAATGTTACAACCTAATCAGGGTCATTCTTTTGAA--ATGCAGGCAAAAGCTTGGGATCAATTAATATTGATAACTGGTAAATGG---AAGTCAGTCCACTAGGACCTGAGGGGTTTGAGAGAATGAGTAAAATTCTTCATCTTCTTCAGCCCCCTTCCTCCCTGACCCAGGCACAAATGTATGCCTCCAAGGGGACAGAGGGAGAACTGATAAGGACAAAGGAAGTTTTAAGTTATACTTTATCAAAACTTTGTCAGCAACCATATCACATAGCACCATAGAGAACAGAACCCATAGAGATTTACAAACAAATCTACGTAAGTTAAATGTTCCCTTGGCTCAAAACATTTCTGTAATTGTTTATACAGAAAAATA-CTTGGTAAAAATAATTAAAATCCTTAGGTTGATATTGATGTCCCTTCTAAAAGCTCATATA--GCATTCTATACTTCCTGACCTCTTATTAAATAAC---ACCACAATCAATAATATAATTGGCTGCATTTATTCGATTTTAAGTTTCTCA--GGAAGAGAACATA---TCTGTTTTGTATTCTCTTTGCTGAGTACATGTCTGGCATATTTGAACTTAAAAAATGT a score=4581 s mm7.chr19_random 1012627 340 + 2598976 AAAATGAAATAATCATAAATGTCACAACTGAATTGGGAAAGAGACACTGCTCTTAGCTCCTTTATTATGCATTTTAAACTTTCCTTCTCTAGTCCACATGACAAAAT-TAATTTTTATCCTATTCATCCCTTATATATACACATGAAAA---AAATCTATGTCTGTGTATGATATACAGATATGAAAAAATCACAAAGCAATATTCCTATGCCTAAGGATAAGCCATTAACAGtaaaagtgctggtcacaattcaccaaatgaatttagtgaatcctacttatttgaacct--gtagttgaaaattactgAAAAATT---CTGTTTTATGATAAACCCTGCAGGGAACT s bosTau2.scaffold2029 115465 293 + 145124 AAATTGAAAGTATAATGAATACTACAACTGAATTGGGAGGGAGGCGTTTATATTGA----TTTATTA-GAATCCAAACCTTTTTGACTACAGT-CATATAAAGAAATACATTTTTTATCATA-TCATCTCT----TACACACAGGGAAATATAAATTGATACTACTGTATGTGATACA---------------------------------CCTGA------------AATAATAAAAATGTTGGCCGTGGTACACTGCATGAACTTTACAATCCCCAGAGGTTTGTAACTCAGAGTTTGAACCATACTACAAAGGTTTATTATTTTATAATAATCCCAGAAGTCAACT a score=19249 s mm7.chr19_random 1013325 831 + 2598976 TAACTTCTTAGTCTCCTTGTGGTCTTTTTTTTTTTTTAAACAACTTGAGAGTCT-TATGTCATCTT------TGATTGCTTTCTTT-----CACAAAAATTTCACCGTGCTCTG-----------------TTCTTCATCAAAGGACACATAGGTACCAGAAACTCGTGGAATGGTGAGACTGAACCTCCCTAGTTGTTTCTGGCTGTTTCTTCAATCAGCAAGAACTAAAACTGACTAGAAT-------------------------GAGATCATATCATCAGGCAGTAGGAAGACAGCCTGGAATGGTGTCAGTGAAATTTGTGGCTAGCCATTATCTCAAAGGAGGAATTGAAAGACACCCATGGCCTTTCTTTCTAAAAGTTAATAAAA-CATGTCCATAGACTGTATAATGCAAAAATGCATCTGCCTGGACTATTTGAAAAGGCTCATTAAGTACGTGTCTTTCGGTCCCCCAAAGAACCtttatttgtttgtttgtttat------ttatttatttattcattGCCTATAACCTCCATTTC-CAATATGCATTTGCACTATATTACTAATGTTGTAATAGTTGGT--------------GTTTAGCTTATATAAATCTATTTCCATGTTTTCTT-TCTTAATATGATGTCAGGTTTTGAAATTATAACTCAAGAAATTATATGAATAT-AAGAAAACTCATTGCCTTAT----ACCGAGTAATTACCTTTTTGAGGCTATTACAGTGAGTAATATCCAGGTAGAAGAAAAATGCCAGTCAACAATGCACTTAATCAAATTGGGAC----CATTTTTCTAGCTTCAGCTAATCTACCAATGCTGACATTTTCAACCCAAAGATTCAGCA-TCTAATGAAACAGAATCT---AGCAAATTAATTGTCCCATCGTAC s bosTau2.scaffold2029 115762 877 + 145124 TAAATTATTATTCTCTTTGGGATCTTTTT---------AACAATCCCAGAGACTATGTATTTTCTTAGTTCTTGCTAACTTTCTTTTCTTGCACAGAAATTTGAACATTCCGTGCATTTCAAATGTCTACCTTCTGCATTTGAGGATGTACAGATGCCAGCACCTTGTAGACTGACATGGCTATGTCTCTCTA----TTTCTGGCTCTTTCATTAATCGGCAGGGAGTCAAATTGACCAGTATTTGGCTCTTGAAAGCACTTGGGATAGTAATCATGTCAGTGGGCAGAAGGAGGACAATATAGCATTGTGTTGGCAGGATCTATTGTTTGTGATTACCACAAAGGTGGAATTTAAGAATG-CTGTGCCCTTAATTTCTAAAAGTTAATGAAACCACGTCGACAGAACTTGTAAGGTAAAAACAC---------TGCTATTTGAAGGGACTGTCTAA-TCTGTGACTTCTAGTTCTCAAAA------TCACTTCTTTTTTTGCCTGCAACACATTATTCTCTTTTGTAGTACAT------TCAATTTCACAATACAAGCTTATATTTTATTACCAGTGTAATATCAGTTCTCTATTATAAATATTAGTTTTGCCTA---AAATCTGTTTTTGTGGTTTTTTATCTTAATACAATGCCATGTTTTACCATTACAACCTGACGGGTTATATGAATGGAAAGAATATTCATTGTATTATATACACAAAGTAATTACA--TTTGAGACTATTAGAGTGACT--TAGCAACTAATGTGAGAAATGTCAGTCAACAATGTGTGGAA-CAAAATGAGACTGTATATTTTCCCAGCTTTGGCAAATTTACCAACTCTACCACCTCAAAACAACAGTTTTAGCATTCTGGTAAGCCAAGTTCTCCCAATGAATTGATTGTCCCATTATGC a score=27847 s mm7.chr19_random 1015593 1007 + 2598976 TTTAGAGCCTACTTAGAATGCAAAGCTGGCAGACAATCTAAG-CATATTCTTCATCGCTTATTTAATTGTTT-TG----ATAATAAAGCTAACAGGTTTGGGTGAGACACCT-----CTGCATCTACATGA---------ATAATTTCCACTCTAATGTGATTAGCAGAGGATCTGGCTTAGGAAAACACATT--CTTTGAATGAAAT------------------CGACAGTTCTGTAAATCAAGTTTATTACCATAACAGGCATAGTATGCTAAAAAATT---------TTTTTCTAAACCATATAAAT---AAACAGCAGATGGGGAATTGCTTCTAGACCTGACTCTTCCAAGCCCTTAAACTGAAACTGGTCTCAGAGTAAATATTTTGCAGAAGCTGTCTTATTTCTTTTTCAAGGACAATGGGATCACAACTTCCCAATGTGTTCCAAGTGTGAA--AACTAG--------AGAAATCAGACCTGTTTCAGATCTTGTGAGGAAGGGAGCAGCCTGGTGCCTGAAGTGATAGATGCACTCTATAAAGCTGACAGATCCCTGTAATTTATGCAGCGGAGGCAAATGGTATGATGCACACAAATGGCTCTGAACAACAGCCATGTTCCCGTTCTGTACGGT---GTCGTTTTCAAGTAACAACTTAAAAATGTAAATCAATATCGAATATTATGTTCATTGTATCAAAACTGATTCGTGCTGTCATTT-AAGTCATTACTTAAAAAATGATTTCTCTCTGAAAGGATTCACGGGG--AAATATTACCATAAAATTTTCTAGTTTCAAAAGTACTCTATAATTTTCTAATAGCTCTTTATTGAAAGATAGCCCAGCTTATTATCATATTTAAATTT--CATCAGAAAGAGATACATCCTATGCATGACGGTGAAAATGAGAA--ATTCTGTTTCTATGGGCTAATTTATTTAACTCTTCTGAATTACCACAACTAACTGCAAGCAAATCAACCTGATTTTTTATATGAATGTTTAAATAATGTGAGTACTATGGCAATACTTAAAGATTAGAATAAGCAAGTAATATAACTTACT s bosTau2.scaffold2029 117801 1056 + 145124 TTTGGATCCTATTTGAAA---AGAATTGTTAGACACACTAAAACATATTCTTTA-CATTAATGTAACTGTTCATGTAATATAATAAAGTTAAGAGGCTTAAGTGTAAAAACCAGGAGCCCCATCCAGAGGAGTGTCCAAAATAACCTGCTTACCAGCATGGTGAACAAGAGACTTGATTTGGAAGAGGAAAATAATTTTCAGTAAAATATATGTTTAACTAAATTGTGACATTTTGATAGGCAAATGTTACTAGCACAATAAACAC------TTAAAAAAATAAAGCAGGACCATTTTAAACAAAAAAAACTTAGAAAAACTGATGGGGAATTTCCCTATGAATCATACTTTCCAAGTCTTTAAACAGAAAGTGATTTTGAAATTAATCATTTTAGGAAGCTGCTTTATCCACTTTGTAAGACTATCAGAATGATTACTTTTCAATATGCTCAATCAGTAACTTACCTAGGTTGTCTAAAATGTTTGAACTGTTTCTGAGTATCAGAGTAATAGGCTGGCTT----CCTGAAGTAATTAATAAAGTTGATAAAGTTGACTAGTGTTTCCAATTTATGCATTGGAGGAAACTGGTGTGATATACACAAATGTCTGTGAGCAACAGTCATGCTTCACTTTTATGATATCTCATCTTTCTCAAATAACAATTTAAAGATGTAAACTAACATGGTGTATTATGTTCATTGTATCAAAA-TGACTTATGCTGCCATTTTAATTCATTATTTAAAAG-TCCTTTCCTTCTAAAAGGATTCATGGGGGGAAATGTTGGTATAACATTTCC-AGTTTCAGAGGCACTCTATAATTTTCTAATGGCATTTTATTGAAAGATAGACTGGCTTATTATCATATCTAAATGTCACATTGGCAAGAGA-AAATTGTATGTATAATGATGAAAATGGAAACTGTTCTGTTTCTAAAAGCTAATTTACTGAACTACAATCAGTTATCAAAACATAATTCAAGCAAAACTGTATGATTTTTTAAATA---TTTCGAGTAAATTAAGCATTA--ACAAAACTTGCAGATTCTAGGAGGAAGGAGATATAAGTGACT a score=45354 s mm7.chr19_random 1017656 1587 + 2598976 TCTTTTTAGCAGAAATAAAGAGAGGTGGCAATGCAGTAATT---TGTCTTCATCAAACAAGTAAGCAGAGTTAGGCTCTTAGTTATCTTCAGTATTCT-CTGTTAACTAGAAAAGGTTGCATGCAAGGACATCCTGGGATTCCCATCTATAAAGTCTTGCTACCTGGGGAGACTTAAAGACAGGCAGAGTGCAGAAGAAATTAGCAAATGGCCTTTGAGAGCTTTAAATTTTTTAAAATGAAATAGATCAAAAGTTTCTATCTGAGGCCAAGTAGTTAGGTTGAAATCACATTCTAAAAATGCAACT---------GAATCAGTCTCATTGTCCTTGATAGAGAAATTTGTGTCATGTTCTTTGAAACCTCAAGTCACACTGAAGTAACAGTGTTGCT---ATTGGTGGTCTTAGAAACTAGTTTACATCCTTTCTTAGCTTGACAACACATCCTGAAATTC-AAAAGCAAATAGCTCTTGCAAGGCTAAAATCCAACTTTT-------GGGCCAAATGCTCCAAAATTTTCTTGCTTCCTACCATTTACTCTGCAATAAAATGGAAAATAATTTTGATTGCC-AGACTCTGGGACTATCCTCTGA-TGGCTCAACCTGC-AAGTGGTCAGAAAGTTCTAATTCTGGTCTGAGGCCGCTTGCAGGATTC--------------------TTTAATCAGTGTGGCATTCTCCTTTGGGAACAAGATATTGCTTGCTTGAATTCTTTCCACAGGAGAAGATACAATTTTCTAGGCCCATTTCCCTGAGAATTGCTTAGATCAAGACTGAGTTGTTTAAAGTAAATTGTTGATAAGATTGTGGGAATGCCGAGATCTTTATTCCTAGAGGCCTGATATAA----TCTAATAAAAAATGAGGTGGGGGAAGAGACCCAGATTTCAAAGTC--TGTGTTCAAAAGAGCAGCTACTTGTGAACTGGATTGTACATTTGAAATCATATTTTTATTAGATGCCAGATGACCCCAAGGGCATTTCAAAACAAGCTACCAAGGAATCCAGCACTGGGTTATGATTTGCATGGCCTCTTGTGCCTCTGAAGGCATTTGATGCGTTAATGGTCAAAGGGCTGAGGAAGATCTGATG-----CCAGAGAAACAAGGAGAAACAGCAGCAACCTCCCTATGACAAACAGACCGAGCAAC-TAAAGGCCATCTGCGCTAATGAAGTGGAGGGAGAGGCCATCTTTTGTTGCTGTCACATTGTGCCAAGCAACAAGGTTCACCACCAAAAGTAATTGGGAAAATACCAAACAGATGAAAACATTCTTGGCAAATGAGCTTGTAAACAGAAAGGGACCTTCAGATCAATGAGCACTAATCACGAGAATAGCATTGTTTCAACAAACAGTTGAG-GGATT---------GGTGCACATGGGCGCAATATTCTAGTTAATTCTTACGAAGGGGGGAGGGGCAGAGAAGTGGAGCGCTGTTTTAGTGTT-TAGTGA-CAGTAAGTCAAGATCTTTAGTGCCTGACATGGTTTTGGGCGTTACTGTTTTCTCATACATTGATAGATAGGCTCTGTTTTGCATTGTTGTTTTGTTTTTCTTCC------TTACCTTAATTTTCTTTTTCTTTGCTTAATTATCCTGCCTGTGCAATGTGAATCTAT s bosTau2.scaffold2029 119923 1560 + 145124 TCCTTTT--CAGAAGAAAACATAGTCAATAATGAAATGCTTGTCTGCATCCACCAAGCAAGTCAGCAGCACTAGATTTTCAATTATCTCTAGGTCTCTGCTGTCAATTAGAAAAGATTGCATGCAAGGACATACTGAGATCCACCTTCATAAAGCCTGGTGACCTAGGAAT-CTTAAAGATAAGCAAAATGGAGAAGAAATTAGCAAATGG------AGAG----------TTGAAACAGAAATAAA---AATACTTCTACCCAAGGCAAAGTAGTTT-----------TATCCTTAAAAT--AACTTTTTTTTTGAAGTCAGTCATACTGCACTTGA---AAAACTTTG----ATGCTGTTTGTAATCACAAGTCACACTAAAGTCTTAAT-CTGCTTGCACTGGTGCCCTTAGAAACTCATTTATACTTCTTTCCAGGCAGATTACATGTACTAGCCTTTGAAAAGTAAACAGCCCTTGTACAGCTGAAAGGCCACTTATTAGTTCAGGGCCAACTGCCGCAAATTTTTAAAACCTCCTATACTTTGTCCTGCTATAAAAAAGAAAACAAATTTTATTGCCCAGAGAATGGGGTTGTCTTCTAACTTATTCAACCCAAGAAGTGGTCAGCAAATTCTAATTCTGGTTTGAGGGCCATTTCATAATGCCATTCTTAGTGTTCTTTCCATTTAATTGGCATATAGTTCCCTGTTTGGAACAGGATATTACTCACTTGAATTCTTTCCATAGGGGGAAAAACAATTTTCCAGGCTCATTTCCTTGAGAATTGCTTAGATCAAGACCAAGTTGGTTGAAATAAATTGTTGATAAGATTGTGAGAATACTAAGATCTTTACTCTGAAATGCTTGGCAGAAAAACACTAATAAGAA---------------AGTCCAAAATTTCAAAGTCAGAGCGTTCAAAAGAGCAACCCCATGTGCATTTGATTGTGCATTTAAAATCTaatgtttgttagatgctagacgactct-ggggcattggggaagacgttactgaacaatacagacctctgttctGATTTGCATAGCCTTGTGTGTTTTGAGATGCATTTGATGAGTGAATTTTCAAAGGTCTGAACAACAACAGCAGTTCCCTCTGTGAGCCACAGAGCTCCG--AGCAACCTCCCCCTGACAAGCAGAGTGAGCAACGGAAGGGCTGTCCCTGCGAATGAAACGTGACATGAGAACGTCTTTTCCTGCTGTCACGTTGTGTCAGACAGCAAGGCTCGGCGCCAAAAGTAATCCTGAAAATATC------ACTAAAATGTTC------------CTTGTAAATAG-AGTGGAGCTTTAAATCAGTGAGGACCAATTATAGAAATGGGAATA-------AAATATTTATGTGGACTACATCAAAAGGTCCATATGTTGGCAATACCCTCTACAGTTATTGAGTCAGGGAAAGTGAC-------TGTGGCACTTCGTTGGTTCCACAGTAATCAGCCAGTCAA---CCTTGGTACAT-CTACTGTTTCATGCATCACT-TTTTCTGGGAGAT-----GATGGTACAGGTCGGGCCTTGTAGACTAGCCCTACTTCTGGATCGCTACCACAGTTTCGTCTTTCTTGCTTTAACTTTTCTTTTTGTATTAAATGCATCTAT a score=7896 s mm7.chr19_random 1019932 414 + 2598976 CTAAATTTCTCAAGAGTCAATCCCTAGATT-CATACTCTGACTATCCTCCATTTTTACTGGTTCCTTCTATATTTCA-GTTGCC-----ATTTGAATGCTTCTTATA--------------CTGAAATTCTCTCTGTACATCTTTGCCTAGCCCACTTCAACTAATG-GCAACTAATTAGCATCTGCTAATGACTCAGGATTCAGTTCGAATGTATTGAAAATGCCATTTCATCATAGAAGTCTCATCACAATGTTT---GTTTGTCTTTTTTACATTGAACCAAATGCATCATAAAAGGAAGAAATCTGTCTGTTATAGTCACTATTTTACGGGGGGGGGGGGGGTTGTAGGCATGTAGAGAGTAATCTGTTGACTAAACCAATGTATATGAAGAAATGAATGAACATGGGTAAGACCAGTACACGGGGGACTATGAG s bosTau2.scaffold2029 123881 431 + 145124 ctaaatcctt--aaatcccatctccatcttgcatattccaagtcccagacatattggtttattccttgaatatgtaatgttgtctcctaacttggggactttgtacatgctgtttgtctgtctagaatactatcaacacttctt-gcccaactaataccagctaatgctttcctagccagtaccagctaattcttcaaaattcagctcaaatctaattaaaacgtcacttcctcagagaaatcttcccggaataattaatgtgtctctctcctccactggaccataggtaccatgatggcaaggaacatggctattttattcattgctttatatgtaacctt----ttgtaggcacacagaaaata-ttggttaaataagtgaatGCATATGACAAATGGAATGAACACGAATAATGCTGTTACATAATGGCCTACTAG a score=8481 s mm7.chr19_random 1020390 441 + 2598976 TTATTTTACTTGTCCATACTTG-----TTATGGGCTTCT----ATAATGATGAGTTTTTC---ATGGAGAACAGTATTAGGTCTTATCAACTTAGATGGTAACTAAACGCATGCATCAGTCTAT--TGATACAGCTATCAGGGTATCTCAGTGGAAGCACCTACATATGAATACCTTCAGACCTCAAGAAAAGACAGCAGGATAGAACAGGTGGCAGAAGGACCAACTGGTCTACAGTACTG----CAACTTTTCTAATCATCTGTGACACAGAGCAATTTG-----CACAGCTGGATGGG-CCATGCGTAAAGTGGCTTTGGCTACGGGCTGAGGTTTTCTTTGTGGAGTTCTGCTTTTAGAAGC---GGTTGAGAACTTATATTCAAAAGAAGAATGAATTGAATCGGTAAGGCTTTATCTTGAGTCAATCTAGAAAACTAAGTTTCCATTCATCGTATTCGCAGG s bosTau2.scaffold2029 124606 440 + 145124 TTAATAAACATGACCACACTCAAAGATTTATAGAGATTTTGTCATAAGAAACAGTTCCTCCATATGAAAAACAATACCA---TTAATCAACTGAGATCATAAATAAATGCACTCATGAATCTATACTCACATAACTATCAGAGCTTCTCAACTAAAGGGCTTAGATATGAATCCCTTCAGA------------GCATCAGGATAGAGTTAG-AGCTGGTGAGTCAACTGGCATAAGATGCTGTACTCATTTTCTATGAGTGTC-ATGACATATAATAATTTGGAAAGTACTGCTAGATGGGACCAGTTTGAGAGTATTTTTTGTTGTTTGGTGCCTTTTTTTTTTT----------TTTTTGAAGCAATGATTTAGATTGTATTTTCAAAAGCACAGTAAATTGAATCAACAAGGATACAAACTGAATCAGTTTATAATATTA-GAATCCATTCACTGTGTTATCAGG a score=40921 s mm7.chr19_random 1020859 2021 + 2598976 AGAATGCT-----------------------------CTTGTATGTTTAAAATGGG-GTGAAGCCA-------------------AATGGAGAAAAACAATGTGTGAAACATGTCGGTGCCAGGAAG-----------ACACAAAGGCAGTTAGGAGCA--CATGTTAGATTGGCTTGGTTGGT--TTTCCTTTTCTTTCTCTATCTTGCCATATTATTTTTATAAAAAGTAAAGGTAAAAAACATGTTAAT-AAAAATAAACCTTATTATAAATAAAA-ACAG------------CATTACGTTTTTTTACCCACTTTATGCCCTCACCCTGAGGATATAATCATGGCAAATGTGAATCC-TGTTAAGAGTATAATTTTTGCTGTAAAGGTTTTT----TTATGATAAGTTGAATGTATATGTGTACTATATATGAATTAGGGTTTTTATTTAGAAAAAAGAGTTCTTTAGCATTTTGTTTCTAAGTATAATATTTATCGGCCAATACAATGATGATATGTGAACTATAAAACATATTATTTAATAAACAGACTCTTCAGTCAAATG--------ACTTA--ATGAGGTAAAACATTTGCTTTT----------ACATTTATGGACAGCCGTGATTTTAAAAGAGAAGCCTTACACATGGATGGAGGTAAGATACTC---------AGAGTCATGTGACAATAATCACCAGAACTCTTTCTTAAAAGTATTGGTTTATAAACAACCACTGA-TTGTATATCAGTTTTCCTTC-AAACTACAAGACAGTCCCTAATATTGTAAAATGTGTTTTGTGTCAGCTATAGATGCACATTATATAGTACAATATAAAGCTCAGACTAAGAAAAGGTATAAATGCTTTTTATCAAGTGAATGA-------GTGTCCT----------TGCAGCAAAAATGCT---------ATGGACATATCATTT----CACATGCTACTTCACATTCTAAGTGATGGCCAGTGA---TTACCTAATTTTGATATTATATTGTTTCTCCCAATGTTTATGG---TATAACT-CATATTTTTCAA-GACAAAGTCTTTAGACAA-GATTATCAGCAATTAAAAAAAAAGGCTGAACATGCCATAAAAGTAAAGTTTCTATCAAAAATAAAT------TAAGAAAAGATGTATTGAGGGATAGGCAGAAAACACATATCTTTCAGTAAAA---------------------------GAGTTTTTGCAAACCTTTCAATAGGGTGTTTCTTTCAAGTCAATTTTCCTGGACTGCTTGTTGGATCTATATCCTTGGTGTGGGTTTTCTATGAATAGCATGCTTAGTTGGGGCAATCAGTCTGCCATTGAGTGTTATATTAAATAGGTAGTGGGTTTCTTACCTCTGAGTTT-TAAGTATCTCAAAGGATTGAGTTATTAAAGTCTCTCCTGTTTTATCTTTGCTTCCCCAAATAAGTATAGACATAGAAA-------AATAATCATTTTACATGGGTAAGTAATGTGATCACTTTAATGGGGATTTAAGAAATATTAGCCTTAAATTTCATGACTTTCGCAAAACCAAAGGGGACCCTGAAAACAATACAGTTCACAGAGTGGAGCTTAATCATCACCCCAGCCGTGCCTGCCCCGGGCTTCGTGGTCGATACAGAAATGTAAAGGTATTAGCAGAATCATCCAGGGAATGTAAACCAATTACAGGAGGTTCCTAGTTTCCACTGCGGAAGTGAC--GCTTTAAAAGTTCCCTAAATACCAAGTGAATGTAAAATGGATTCAAAGGGAAGAAAACCAATGGCAGAAAGGGGCGACAGTGCTAACTC----AGATGCTGAAGCCTGCCCTTGCAG-GTAAAAAGCTTACCCTGAGGAAACGT---ATAGTTGGCTTCCTCCAAGTTAT-GGACATCTGATTAAGGA-ATAGCTACAACTTCAGGCACCTTCATATG----TTATTTGTTAGCACTATATAAAGTGTTTACAATGTAAAAGGCATCGCAACGAACTACTTTAACATTTGTTATAAGACAATTTCAAGGAATAAA---CTTATTATTGTTCTCTCTAGAATTCAGATCAGGGGT------TTATTATTTTTCA--AATCTATTTACACTTTCTAAATAATGATTAACACTAAAGAATACTAAGAATACATTCACTTGGTCTTAGTAATAAT----CAGACAATTTAAGATAAACGTATTCTGAATGA s bosTau2.scaffold2029 125195 2164 + 145124 agaatactggagtgggttgccatttccttctccattgcatgaaagtgaaaagtggaagtgaagtcgctcagttatgATAGGTGTTAAATCAAAAAAGCAGAATATAAAGT-TGTAAATGACCATAAGTACAATTTTAAACACAAAGATAGTTAATAGAAGTTATACTTGATTTGTTTAGACTGTGATTTTTGCTTTTTAATCTATATCACTATGTTCTTTT-----AGGGTGaaaatataaaatagtttaattaaaaataGACAGCATTATAAATAAAACACTGACTTTAATTTGCTATTTTGtttttctgctc--tgtataaccctaatcagggaatatagctgtggtATACATAAATCCCTCATTGAAGACCAGTTTTTATACCAAAAATTCTTATGATTATTACAATT---ACATATATTTCAACTTAATATATATAAG--TATTTCCTTCAGAAAAAGAGATATTTTGCCTATAACTACTGAGTACAA-----ATTCAACAATA-AGCAATGATA-GCTAACTTGAAAATATTTCATTTAAGAAGTAG--TCTATATTCATATATCAGAAACACTTAGAATGAAATAGAATGTGTGCTTTTTTTCCTATTTGATTTTCTGCATGGTTATTTTTTAATAAGACAGG----ATATAAAAATGAAGATCAGTCTCTCTACCCAAACAGAGCTTTATCACAAGAAGTATCATAACC------TAGAAGTAAATATTGA-AAATAATTATTGAATTACATATCAGTCTCCCCACTAAACTGCAAGAC---CCTTACTATTAAAAAATATGTTTTCTATTTGTTAT----GCACACTGTAAAGTACAATCCTTAACTTATCATAAGCATATTTCTAAATG---TTTATTAAATGAATAAAAACACAGTCTCTAAGGAAAATAATGTAATGAAAATTCCTTTCCTTTAATGAAAATATCTTTCATCATACATGCTACTTTCTGCTCTAAATAAGATTTAATGAGCTTTACCT----TCAATCTGAGGTTGTCTCATCTAATGTCTTTGTGATTATAACTTCATATTTTAAAAAGAAGAAGCCCTTAGTGGATAATTAACAGCAATTAAGATAA--GCTTAAACATGCCATAAAGGTAAAGTTTCTGTCATGGATAATTGTCTTTCTAGGAAATATATCTCATGAGACAGG------GCACCTATTCTGCAGTAGAATAGTTTTGTTTTGTTTTTTTTGGAGAAGAGTTTTGAGAAACATTTCCCTGGGATATTTCTTTCAAGTCAAACTTTCTGGACCAGCCATCCAAACTGAACACTTGGTATGG--TTTCTCTGAAAGATATGGTCTGTTT----------TCTGCCACTGAATCCTGACTGTGCTAACAGCTAAGTTTCT-ACAACTGAGTTTCTAAATGTCTCAAGTGAATCCATCTTTACTATCAGTCTTACCTTTTTTCTTTTTACCCAAATAGGCATAGTCAATGAGACAATGCCAACAATAATTTCACATGAATAAATAACATGATCATTTTAGTTGGGTTTTATAAAATACTAATCTTATCTTTAGTGGATTTTGCACAGTCAA-GGGGACCTTGAAAG-AATAAAGCTTACACTGGGTAGCCAAATCGTCACCTCAGTTTTAAATGGTACAGGATTTGTGATCTATATAGAAACCCAGAGGCATTAACAAAATTACCCAGGGAATTTAGATCAATTGGAGCCTGTTCCTA---TCCCCTGCAGTGCTGGCAAACCTCATAAGTTCGTTAAATACAAAGTGAAGGCACAATGTACTGAAGGGAAAGAAATCCAAT---AGGAAGAGAAAACAGTGCTGTCACAAATAGATGTTTAAACATGTTAGTTCAACTTAAAAATCCTCCCCCGGGGAATAATTTAACAGTTTTCCTACTCTGAGTGATAAGACACCTAATTAAGAAGACACTTTGAACTTCAGAAATCTTTAGATGTTGATTATTTATTAGAAAGCTATAAAATGCTAACAGTGTAAAAAGCATTACAAC-ACCTCCTCCAGTAATTATAGT-----TATTTCGAAGAATAAAATGCACATTATGCATCTCTCTAGAATTTAGATCAATGGTCTTAGACTTTCATTTTTCATCAAGCTATTCCCTTTTTCTAAATAATAATCAATGTTAAAGTATGTGGGTTATGCTTTCATTTGGATTTAGTATTAATTGAATAGAAAAATTCAAACTAATTTATCCTAGTTGA a score=11239 s mm7.chr19_random 1023277 708 + 2598976 tatatgcTTGTTT---CATGATGTTCAAATTATAGGCTAGCAAATCTACTGGTCAGATAAACCTATTGGGAAGTACCTTGATCTAGACAATCATTTCATTAT--TTCTTTGTTCCTTAACTAGAACTA-------TTTCGCCAAACTGTTAGTGTTTTATAAAAA-GATATCTATGAGTATTTTCTAGTCTAAGTATAATTTAATGATATACTGTGTAAAAACAACAATTTTAAC-ATATACAATTAAAAACTACTTAGTCatataaaatatttt----ataatatatatGGAATAATTAATGTCTGTTTTTATAGTCATTTGTCAAAT---TTAAGTATCTTTCTAAAGATTCCTTCAACAAG----ATCATTCACCTTTGTAGCCCTTTGCAATTTACAAAGACTGCTTTTTTTCCATAAGGTTATCAATTAAAATGC-----AACTTTAAAGAAGTGCTA-ACTGAGGCTGAGGAAGAAGTGTCGGGAGCCACGCCCAA-----------TAGTGATA----AGCCGGAGGGA-------AGGCTTTCCATCTTTGTTCGGATTCATA-----------------------CCACAGTGTGACGAACTATGGCCGACTCTTCTTTCTAACTGTCTGAATCT-AGTTTTAGTGTACTTG-TTTCCTTACTCCTTAGAAGTGCAGTGTAAGGAAGTGAATCCATGAATGGTCAGAATTCATAAACCAT-CACATGGGCT-ACTCCCACAAAGTCAATAGAAT----------------CTCATTCACAGTCACTTCTCCATCC s bosTau2.scaffold2029 127361 777 + 145124 TATATGCAAGTATAAATATAATGATTAATTTATAATCCATTAAATTTATACTTCAAAGAAC----------AGCATTTAAATGTAGGTCATCATTTTATTGCCCTTTTTGGTTCTTTCATAATAATTGAACTTTCTTTGAACTAAATGTTTCTATTTTATTAAAATGATACAGATAA----TTTCCAAGCTAGGTTTAATTTTACAATATGCTACTAAATTGAGACAAGTTTGCCTACATAAGATTAAAAAGTACTGTCTCAGATATAACTTGTTCTATATAATAGATCTGCAATAAAT--TGTCTGAACATCAAACCATCTAGCAAATACATTAAATATCC----AGTGATTGCTTCTACAAATAATACCATCTACTTGTATAGCCCTTTATAATTTACCAAG-----TATTTTTACATATTGCCATTAATTAAATCACTAAATAACATTATAGAGGTAAAATAATGAGACTGAGAGACTGATGTTAAGA--CAGGACCAAAATTAGTTGGTTGGCAATAACACAGCCAGGGGTAGAACCTGAGGCTTCTAGTTCTCATTCAGAGTCATGTTTCTTTGTATTGATGGATTCTCTTCCAGTGGGAAGACCTGTTGCTACACCTATCTTCTAATTGTCTGAATCTGAATCTCAATAGATTTGCTTTCCTGCCTACCTTTAGTTAAAGCATGTGCAAGTGAACCCATAAATGCCCAGAATTAATGAGACATATACACAATTTAACCTTTGTAAGGCCAGCAGTACACTGAGAAGGATATAACTAATTCATAATTGCTTTCCCACCC a score=4692 s mm7.chr19_random 1024185 330 + 2598976 TCCATTGATTCTTAGAGGAAAATATTCTTGTTGTTGTTGTTTTAGGTCACTACAAATTTAGT-AATCAAATT-TTGGCATGAACTATGGACTTAACACTAAACACTAAATGTTACCT-ATTTAATCCTTTTGTTGTCCTATAGGATATGAAATGTCAGTTTGTATT------------------GAGTGAAAGGA-AATATTATGAAGACCACTGGTTTTGTTTTGTTTTTTTTCAAAATAAC-TAACATTTTT----AAAATTACATTTTAAAAGAATCTTGACT-ATATCAAATCTTTGTCAAAAAGCTTTGGCAAAACTTTGTTTTATAGCAAGTCATCCTTATA---AAAAATTTAC s bosTau2.scaffold2029 128966 329 + 145124 TTCATAGATTCTCAAGGCAAAAGAAATTATTTTATCCTTTTTTAGGTTACTATAAGAACAATCAATCAGATTCTTCTCCTGCACCAT----------CTAGTCACTGA-TATTAGTTGATTCAAACCTTCCTGTATCCTATATGATATCAAATACAAAATTATATTTACTCAGGTTACCTTCTTGGGAGAAAGAACAGGATTATATAGA------------TTATACTTTTTAAAAAATTAATGTAAAATTCTTGCAGAAAAT---------AGTCAATCTCAACTTACTTCACATTTTTGTTTAAAAAAAAAAGTAAAGCTTTGTTTTAAAGCAAATTATTCTAGTAGATAAAAATGTAC a score=14829 s mm7.chr19_random 1024533 531 + 2598976 TTGGAAGGTATTTTAAGTCTGACAAATTACATGTTTCATTGT-AATTGTTTACATCAAAATTAAAACTA-TCACTT-ACCTGCTTGAGTTGATCTTCA----CAAAC---GATTTCATGGGTCGAAAAGAGCCATATTAAGTAAGCACGATATGTAACAAGTCCATTG-----TTTGCTTAATTTTTCTTTTAAGTAATCAGATTTTTATTGCCAGAGCACTTGACATGAATTCCAA----ATATTTGGTGTTA--TCTTATTAAAGTCATTTTTTTAAAATCAAGATGAAGTCCCCCAAACAAATGTCACTTACTTTGCTTTTGCTTCTGCGTCCTCATATGCTTTGTTAGAAACATCGTCCAGTCCTCCAATCAAATGCTTGAAAGAGCTGCC--AGAGGAAACCCAGAGGAATCATAGTAAGTCCTTTGCAAAGTGGAAATGATATCAAC-CAGTC--TTAAACTGTGAAATAATTTAAGCCATTGTTTAGAAAGAAAAAAAAAATTCAAAA---CAATTTAGGTAGATAGCTAAGAAACATACCAGACAGTAAAAT s bosTau2.scaffold2029 129928 550 + 145124 TCAGGAAGTGTTTTCAGTGAAAGAAATAATGCATTT-ATAGTCAATTATTTGTACTGGATTTTAAACTAATCATTTTCCCTTCTACAGATGACCTTCCTCACCAAATTAAGGTTTCATAT-TTAAGGACAGACATACTAAGTAAGCATACTATGTAATAATTATCTTGAGCAGCTTGCTTATTTTCACTCATAAGTAGTTACTTTCTTTCCAACAGAATGTTGAGCTTTAAGTTCAACAAAATATTTGACCTTACGTCTATTCAAAACCATGTTTTAAAAATCAAAATTAGGGCCATCAGAT---TTTCACTTACTTTGCTTTAGCTTCTGCATCTTCATATGCTTTATTAGAAACATCATCTAATCCTCCAATCAAATGTTTGAAAGAGCTGTCAGAGAGGAAAAAAGCAGTGATTACGATAAATCCTCACCAAAGTGGTAACAATGACAGCATAGTCCATGACACACTGAAACAATCTGAAAGGATCT-----AAATAAAAATGAATTTAAACATTTAATATCAGTGCATTATTAAGAAACGTATCAGATAATGATAT a score=2623 s mm7.chr19_random 1189789 96 + 2598976 TTTCACCCGGTTCCCAGCCTAGTCTTCACTCTTCCTTCCCTTTGATCTTGGGAGCTTCCCGTGCTT--------------TGCTGCTACATTC-CCTCTCACCTAAGTTAG s bosTau2.chr29 14793794 111 - 45822729 TTCCACTTCATTCCTGCCCTGGTGTTTCTTCAACTTTCCCTTTGATGCTAAGAGTTTCCTATACTCTTAGCCTTAGAGAATttcactaaattctctttttgcttaagttag a score=3763 s mm7.chr19_random 1190281 64 + 2598976 AACTGATTAAACAAATTTTGCACCTTCTGGAAAAATTTGAACAGTGTTTGGGTTTGGTGTCTAT s bosTau2.chr29 14793943 64 - 45822729 aactTGTAAGACAAATTTTGCACATTTTGGAAAAATCTGAAGAGAGGTTGGGTTGAGTATCTAT a score=27899 s mm7.chr19_random 1190578 461 + 2598976 ATGCAGCTCAGCATATGGCATACCTGTGGCCCAGTAGTAAATATCCCAGTCATTGCTAGGCTCGTTAATCAGGCGATCATAGAGGTTCAGCTGCTTCTCTGTCATGTTGTGCAGATACTCTTTAGCAAACAGGCTAAAATGAGAAGGAAAATGAGGTTGACAAGACTGTCTT--GTCAAAGAGAAGTGACACCCAGAGCCTTCTGCCCCACTACCTAAGGAGAATGCAGTTCTCCAGCATCCCCCTCTTTCTGCTCTCATAGAGTAAGCGGGCTCTTTTGGTTTCTATGGATTCATCAGTTCTCTCCTGCCACGGAGGCAAAGGGATTTCAATCATGTCTTTTTGAGAGTCTGTTGGGCTGTCACCTCTGTAGAAGCGTCTGAATGATGTCACACTAGGCAAGGGAGACAGCAGACTGTGCTTTGAC------AGTGCCTGAAACAAACAAATCACAAAAAACCTCGTT s bosTau2.chr29 14794077 465 - 45822729 ATGCTGCTTATCATGCCTAGTACCTGTAGCCCAGTAGTAAATATCCCAGTCGTTACTGGGTTCATTAATCAGGCGATCGTAGAGGTTCAGCTGTTTCTCTGTCATGTGTTGCAGATGTTCCTTAGCGAAGAGGCTAGAGTCA--AGAAAGACAAAGGTGAAAAGGCTGTCTCTAGCCAGAGAGAAGCAACCCCCATTCTCCTCTTCCCC--TACCTAAGCAGGATGCAGTTTTCCAGCATTCCCCTCTTTCTGCTCTCATAGAGCAGCCGGGCTCGTTTGGTTTCTATGGATTCATCAGTTCGCTCCTGCCAGGGAGGCAAAGGGATTTCAATCATATCCTTCTGGGAATCTGTTGGGCTGTCACCTCTGTAGCAGCGTCTGCATGATGTCATGCTGAGTGAAGGAGACACTAGGCGGCGCCTTGACACAGCAAGCATCTGAAACAAAAAAGCCACAAACATCTTTTtt a score=6426 s mm7.chr19_random 1247981 230 + 2598976 ATGTTAGCTCAAGATGGGTTTCTGAGAGTAGCCACTAAGAAAATTTGGCCTGAAAGAGACTTTGTGCTGGGAAGAATATTTGAAAGGCTCTCCCAGGCC--TTCTAATATATCAAGGTTCATAATTATGAG--TGAACATTTT-ACTTCATCAGCCACGTAGTATAACACTTCTCCTTTCTCTCCCTTCTAATTATGACATGGAGTGTGGTGTGCCTCACACGTCGCACAGGTTG s bosTau2.scaffold889 313630 228 + 324586 ATGTTAGTTTGAATTGAGTTTCTGACATGAACAACTAGGATAATCCTACCTTATAGAGAACCT-CACTGA-AAGAACATTGTAAAACCTTTCTCAGTCTATTTCTGGGGTCTCAAAGTTCAGATTTGTGAAACTGAACATTTTTGTCTCACCAACCACATTGTATTACATTTTTTATTTCTGTACCTATTAATTATG--TTGAAAT---GTATGCTTCAAATATTACATATGTTG a score=3948 s mm7.chr19_random 1249073 517 + 2598976 CATATCTCAATAACTGGGATCACTGGAACAAAA----------------AATTAACTTGGCAATCATCCCTCAAGTCATGCTTTGATTTTAAACGATAACTGAATTTCTGTCAAGCTGTTTCCCACAACCAGTCATATTCTGTGTGTTCTTTTCCAGCTACTACTGGCAAAACAAACAAAAAAAATATCAGTTATTTGTTAGGGAAAAAAACAAGAAAAATTTCACTTCATTCA-TTGCTTCTTGAACAGGCTACATTTGGTTTTCAATTCCATAAATGTCTGACCTCATGGGTTGAATTGCAATTGCTTTCACTGTTAAGATGGC----AGATGATTGGGACTGTCTGG---GGTTCTCCTAGAATGACAATGTACAATGTGGCTAAGGCTGAGCTCACCT-CAGAGATATTAAGAAAATAAATTCACTTA--------------------TGTTAGTTTAT----------ATC---------TGCATGAAACCCAGGTCT--------------------------------------------CTCAGTGTTCAAGGG--TCCTCTTTAACTT--TTGACACTGAAC---CATGCAAAGTAGAGAGTCCTGGG------------------------------------------------------------------------------GTATTATTATTCTAT s bosTau2.scaffold889 314601 681 + 324586 CAGATTGCAGTAATTAGAATTATTGAAAACAGAGTGTGCATTTTTGTTGAAATAACTTGACAGTCACCTTTGAAATAATGTTTTAGTCAAAAGTGTTAGCTGAATTTTTATAAAGCAGGTTCCCACAACCAATTAGAGTCTGCATGCTCTCTTTTGGTAAGTTTCAGAAGA---------------ATCAGTAATACATCA--AATGAAAGCAAG-GGCATGACCCTTTACTCACTTTCTACTTGAAAGGAATGTGCCTTGTTTTCAGTGCAGTGTATCACTGGTGTATCTGGCAGAATTGAAATGGCTAAAATTGTTAAACAGATTTCAAGATGATTTGGAAGTTCTGGCTTGCTTCCCATACAGAG----------ATATGACTAAGAGTGGGCTCATGTCCAAAAATGTTCAAGAAATAGGCTCACCTAAATAGGTTTGaggacttccctgttagttcagttggtaaagaatccgcctgcaatgcaggagaccctggtttgattcctgggtcaggaagatctggaacagggatagactacccactccagtattcttgggcttcccttgtggctcagctgggaaagaatctgcctgcaatgc-gggagacctgggttcaatctgtaggttgggaagatctcctggagaagggaaaggctacccactccaatattctggcctggagaattccatggagtattagtccat a score=27029 s mm7.chr19_random 1249590 1795 + 2598976 CCTCCCCAGGTTTCTTAGGTAGCACAGTAAAATCACTCCTGTTTCTATTCCATCCCAGCTATTGC----CACCTCATCCAACTCTGCATGTATCTGTA-TCCTCTCCCTTTGTAGGTCCTCACTGATGGATGCT-----AACTGGTTTCCCCGTCTGGGTGCTCCTCTAGTTTTGCTTCGTAACAAGGTTAGATCTGGGCC-------------AAACAACTTCAAACCATGTGCAATGCTGAGCTGACATCACTGAAGTTGTGTTTATGGCAC-AGTGAATTATAA-ATAGACAATATTACAGTG----------------------------------------------------------------------GCTCTCTGTTCCCC-----------------------------------------------------------------AGAGTCAAGTG-------------------------------------------------------------------GCCTCTC-ATTAGTC---AGTTTGTTTATAAATACA---------------GAACAGACCCATCAAGGGACATGTGGGGACCTGGGACTGGGCATCTGAGCAGCTGTCATCCTCTGACCTCAGAAGAACTCAGGGAGGGATGTGTTTTAGACACCTGGGAGAGAGTTGTGGAGCTG---------TCAGGCAGGCTTACACAGGGGAAGGAGGGGTGCTAGTG-----TTGGGGATTCCTCTTCTTCC--------------TCTGTCTCC---TCTGTCGCCAGGTCTGCTC--ACCAGTCCAACTCATTCTGAAGCCAGAGGGCATGGGGGGAGGGGTGTTGTGGG------TCAGCCTCTCAAGGAGAGGTGGGCATGGAATGACAAGTGAAGGCATCTCTCGTGTAGTcactaagaaggaaaaaaaaatgtgccgataaatctg-gaggcaatgttcttttatcatttaggatttttattttaaatgtattgaaagagcattgttaaacAGATAAGAATTCAATTATTTTTTTCTTATCAGACAGTACCTTCCTGGATTAAAAATGACCTTACATTTCAGTGCTAAACAATGGTATGATCTTTTATAAAAC----TGCGGCAGA------TTCCCCTG-------------AACCCCTGCTAGCAAAAATATGACAGTAATGCAATTTCTGGAACCTTACTCATTCCACATTAAGAGGGGACGCCTGATTTCTTCCCTCCTGGATATCATGGTATTTTG-GGTTTGCCTGTAAGCAGAAGAAGGCAGCAGG-AGGGTGCTGCACAGCTTCTGAAGACAGATCAG-AGGTGAGGATGCAGCTGGCAGCTGGCTTGCTGGA--AAGTGTGTCAGAGCCTGGAGCCTCCATGGCAACATTCT--CAGGCCCCGTGACCACCAGGCTGGCTGGACTCCCA---------------GAGAGTCACATGGAAAAGCCCTGAGACCGCATGGAAGAGCA----------TACTGTTTTCCAGCCTCTCCTATTTCCTCCAACTTCCTGTTTGTCCGTTGTCAGCCACTGTGGGACAAGGGAATGGGATCT--TAAGGGACTTCCTTATTGGA---ACCTCATCATGACGTCCAGAA----------ACAGGA-------------GAAATGGTCTCTGTCATTTTACACCATGGAGGTTTGAGGTGAGTCATTAT---ACAAAAGTAACCAAAGCTATTTTAAATGCCAGTTAGATTCCACAACTGT-------------CCCCCAAACAAC----ATGAC-ACAGTAAGGACAACCACGAACACATCTG--CAAGTGGC-----CAGTGGCCTCCTGTGCAGCATCC-------------ATGGGAGGTACTGCCAATTTTAAGATCTGCCCTAATGAAAGATATGAAGGGAAACACACTGTAGCCCTTAGGATTGATGGGATGTGGCAGCACGTGCGCAGTGGGAGAAACAAAGACGGTGAGCGAGTTTGAGAGCTCGCTGCTGAGACTTTTTGTTTTGAAAAACCTTAGGAGTTTGTAGTTAAAATGACAGGAGTTTCGAAATAC-CAACAACAACACAAAAACAAAGCAAAACTGAATGACATAACTAAAAGGACAGTAAAATCACTGAAATTCACCAGCAAGAAATAAACA s bosTau2.scaffold889 315413 2113 + 324586 CTTCCCCAGGTATCTGGGATCCCACAGGGAAATCATCCATG-TCCTCCTTCATTCTGACTCTTACCCATCCCCTCAGTCATCTGTTTGTATATGAGCATTCTTCATCCTTCTTAGGTCATTTCT------TGCTTGGGCAACAAGTCTCTCCTTCCTACTGATTTTCTATTTCTTCTACACAACAAGGGGAGGTTTGGGCCTTGCTTATGTCATAGATAAGATCAGGC----TGTAACATCAAGCAAACATACCTGAAGGGGTATTTGTAGTACAAGAGAATTACAACATAGAAAATATTACAGTGGGTCATGCCCTTAGAGCCCAGTGGCCATGCCTGTCTGCAAGAGGGAATTGGCCCAGTGTCTCTCCCCTTAGCTCTCTGCTTCACCAGCCCACCTGTCCTCAGTAGAAAGGCTTTGTCCAGGCCAGTCTCTGTTCATTCTGTTAACATGTAAAGTGAAGTGAAGTCAGTTCTGCAGTTGTATTTATtctaagatgccattagctgtaaggtgcagcattattttatacacctctTGACCAGTCAAGAATTtatttacaaaggcactagttaccgaggtgtaggagaaccaccacgaaaagtgtagaaacctagggct-aacatctgaggaactgtcaccaccttcacataaaagaatgaggggtgggggatattactggaa--ggggagagaattgtagagtgaccaccagactcaggtgagctcat---gggcagagaactgtgtgaatgtatactctgctcttcccctccttccctcccttcctcccttttgtctcctggtctcctgccagg-ctgctccaagtggcccagcccaacctgaagccagtgggcacaggagcacatccacagagggcaaacttcagcttcatgagaag-tgtggaaagtggatg--aatggaAGACATCTCTGCAACAGACCccaag--gaagaataaattctgccaattaaactatgagacactgttcccttgtcacttgaaatttctgtgttacacctactgaaagagc--tgttagacatataa------aaggaatttgtttttgtcatgtagtacttttctggatttaagataacttcacatttcaatactgaacaaaagtacaattttttggaaaacattttgtggcaaatattttttccccaaaggtgatcacgataacagctcttgcccaacatgtg------------cttctggcacctcacgactgccacactgagaggggaagtctagtttctcctcgctcgaatct-aggctcttttgtgacttgcttgtaaccgatggacagcatctgacacggtgcctcatgacttctgaagccagctctgaaaatgatagtgtaaattccaccttgtttgcttgaatagttgctctggagcccagagcttccatgttaacagtctgactggtctc-tggccaccatgttcggaggaacccaaactaataaaactcagaaggattccagggagaagtctcgggac--tagtgaagagagatcgatgctttgccagtttccagcttctcctgctccctgc----ctcagttgttctggttccagccaatctgggac-------tgcagtctcatgagagatgttttaaccagaagcatccagtcaagatttcctgaattcctgccccacagaaagtgtgagatgataaaatgattgctgttgttttaagccattgagttttgaagtgattagctatgtaacaagagtaaccaaAGCAattttgaatgccagttatactcaacagatgtagtgccagtgatgtctgtaattaactgaagtgatgacagtaagaataactgtaaccaagtttgcacaggtggtgataactatgtcatcttggccagtatcctggccaaaaacatttgtgaagtgccatacattttaagatgcttcctagtga-------gaaagaaaatgcagt-------ttagtactgacaaaatgtggTAGTATTGGTGTTGAGAGAGGGACAAAAC---TAAGTAGGGTTGGGAACTGGTTGGTAAAG----TGATTTTGAAAAAGCTTAATATTTAATAGTTAAGATGAT----------ACATACTCATTTACTCAATAAATAAATATCAAATGAGAACAACCTATTTA----GGTCATGAAACCACCAAATGTAACCATCCAGAGATCAACA a score=11729 s mm7.chr19_random 1251802 527 + 2598976 CCTCTTTGGCCATGTTCGGGTCTGGCCATTTATGTGGT--GAGTTTTGTGGTTTTAAATGATTTCTTTTC-ATTGT----GTTTGCGTCTCAGCAAGGGATGAAACTGAACCTCTTTG--TACTTTT-GTCAATTTGAACTTCT------GTGAATTGACTCTTGATTGTCTTTTGGCCATCATTCTTTTCGTAAGTAGTTTGTGGGAATGCTTTGTGTAATAGCAGTAATTCTTTATGCATTGTTTGTCTTGCTA-----TTTTTTTCCTGTCCTTCAAACAT-TATCATTGTGGCATTTTGATTTTGTT------GCCCAGAAAT--------TCTATGTGAATTGATTTCACTCTATAGCTTCTGGCTTCAGTGACA-------AAATTCTTGTTACAATTTGTTA-GGTTAAAAGCATTCACCTATATTCATG------TTTTTGCatttattatgaattttattatactta-----taatttatgaaatttaaCTTCTGTAATAAGG--CCAGTTGT-CCAATATCATTTGATGATTAATCACT----CTCCAGTTACTGGAAATGATACATTTATCATGTACT s bosTau2.scaffold889 318416 561 + 324586 cctccataCCAACATTTGTTTTTTGTCATTCATCTGATCCTAGTCCTATGGTTTAAAAAGATTTCTTTTTTGTTGTTCTTGTGTGTGTTTTGGAAAAtaatgaaactgaacatcttttcctactttttgtccattttaatttctccttttgtgaatttattattcatagtcttt-gaccat-----tttttatagttgatttgtaagggc---------------------tctttgtccatcctgTGTGTTACTAAATAGTTTTTTCTAAGTCTTTCACACCTCTATAACTGTGTTATTTTGTTTTTGTTTTTGCTGCCAGGAAGTATTTAATTTCTCTGTAAATTCATTTTCTCCTATGGTTTCTGGCTTTGGTGTCAAGTTAGGAAATGCTTGTTCTACTCTATTGTTTTTTAAAGTGTTTACTTAGACTTTTGTTTCACTTTTGACATTTATTAAAATTTTTAATCTAACTGGAATTGAATTTATGACATTTAATTTTTCCCTTAAGGTTCCACTTGTCCCCAAATTATGTG-TGAATAGCAACTGTTCCCCCTGTGATTTGAAATGCCACATTTATCATACATT a score=14176 s mm7.chr19_random 1252889 1180 + 2598976 GGGATTTATTGTCTATGTT-----CCAGAGAGCTGACTCCTTTACGGTACCACATCTTGCTGACCAGAATCAAGCACCATCATTTCATTTAGTCAATTAAGTTTCATTTCTCTGTATGCTTTGTACAATTTCTAGCGGTAAAAAATTTCCTTTTGGTTTTTCTGTCATTTAAAAAAATTATCCATCGCTATTGCAAATACTGTAGTTCTATATCTGGTTAT-ACAGACATGGAAAGACAGTAATTGTGTTTTTGTGCATCT----TGAAGCTGATTATCTTAATGATTTTCTTAATAGT-CCAAAACTTTTCTATTTTG--CCCCTGGGGTTTTCAGGAAATTATAAATTGGAAAAGGTTATATATTTTATAACCTTTTATTGACTGGAAGTAATGATATTTTTACAGTCACACA-CAAATATGTATAGCTC-------ATTTAACTGAATTGATCGCATTGGCTTGAATCCTCAGAATAATGTTTGGTGACTGCAAT---------TGTCCTTTCTTTGGGCTTTAATAGAAATATTTTCATTATTTCTCCACTAAGTGTCATGCTGGATTCAGATTTGCAAAGAATTTTTCAATAAT--ATGCCACCATTGCCCATCCAAGTTTATTTTACAGTTTGGTTTTGAAATGCATAACAGATTTGGAATGAAATAAATG-----GACAGCTAAGAAA---TATATTATATTAATTTACTTACTAATAAGGAAGTATTCCTAAGGCTTAAAATGA----CATTTACTCACAATC---TAATATCCTTTGGGAGTATTTAATCAAAATCCTTTCTCAAAATCTCTGAGATTTTGGGGGTGAGGTTGATCAACTACTTTTTAAAatttatttatgtatttatttatgtatttatttatgtatttattcacttTACAACCCAGTATCAGCCCCTTCTCTCATCCCAGTATCTCTTCACATAGGTTCTCCCCCGACCATGATCAACTATTTTTTGTTTGATATGATTTAT--ATAATGTTA---TATTTAGAACATGCATTTGTAATATTTCCTCTTTCTTTAAAAACTGTTCAAGGTGTTAGTGAAGAACCTTATTC-----AGGTAAATGAATCATATTTACTTATAAATAAAATTGTTCTGCCTTTTTTTTTTTGACAAGTGGCTTTTTAAAAGCCCAATCTTTTACTTATGGTTTTGGTGTCA---CAACAAAAGGCTGTCAACACCATATTTTAATTAAAGT s bosTau2.scaffold889 320937 1052 + 324586 ggagcttactgcctttgttttattctagaaag--------tttacagtttcaggtcttatgttcaagtctttaatacattaattt-------tgagttaatttttgtgtatTGGTAGAGCTT-TATAATTTGTATTACTGCATATTTCTTTTTACTTTTCtatttcattt--------tctttgttgttattgtaaatgtagtagttttctcactagttatcattggtaaataaaaaggctgattgaatttttgtatatttgttttaaaactagctaccttactgatactcctaatagttccacaagttttacagtttgttctcctgtcatttagaggta--------------------------------------tattaactaaaaattctgacaattttgcatcctcccctcaagtatgtatacctcttatttcattttattga-ttaattacattgtcttgaatgttcagaacaatattaaataattatgatgatctaaggtatccttatttctgactttaatggaaacattttcattgtttatccactaaacataatactgagctta-attttcaatatgtatttattttatttattcaagcagtaatcattccatcctaccttacaattaaaaa--aaaatcaggaatacatttggaattaaccaaatgtttttggcaggtaagagagtatatattatgtgaac--atttacttatattatgttatccttgcagtctagaatgaattatacttatttatgatccactactatcctttc--agtgtcttatttgattcttctagtaacat-------------------------------------------tttgtttagg-----------atattttttggttgat-------attcacaagtgag-attggtc--------------agtagctttc---------------------------------ttttAGTTTAGTAAGATTTAGCAATAGTGTCAGGATGTTTATATCACATATTTGGAATATTTCCTTTTTCTTT--ACACTGTTCTAGGCCTCAGTAGCAAACTTTATTCtatatatatatatttaaaatatttGCTAACAAATGATTCTAGTAGG------TATTTTTGATAAGTAGC-TCTTAAAAGCTTTTTCATGTTCTTCTGGTTTTGGTTTTAGGTTAAGAAAGACTTGTTTTAATCTAATTTTATTAAAAGT a score=14128 s mm7.chr19_random 1256148 1042 + 2598976 TTTTGTTTTAAGAATTAAT--TGTCATGGTAAATTTCTTTTGCAAGGAAAAGTTTCTCTCAAACAGTAAAGTGAATCAAACATCAGCAACAAAACACTGGGTGGTGTTGGCTGCCTTTGG--CGAAGTCTAGAAGAAGGCACTGGCTACAGTTGTGTAGTTGAAGATACTGCTGTGTCAGAATTACCAGAGGCATGCAAGCTC---------------------ATGAGGACTGCCAGTATGCTTTGTG--------------------ATCTCAATATCCTATATTTTCTTTCTTCTTCTTAACCACAAAGTTGAAAAGGACAGTTATCTCTGAACATGTGTCGGCCTG-AGACACCAAT------CCATAGGCAACGTCATAAGT-----TCTGACCAAC-TAATAATGCTCTGGTGATT--------TACAAATTGCAGAGACAG---------TCAGTGTGGTGTAAAGAAGAGGCCAGCACGGGAGGTGGCAGGCCAGGGACATGGCCTCTGCTGAAACCTAGGATTGAA---------------ACCAAAGA----GCAGAAGGCT-------GCAGCGAAGACA-----------ATCCCTCCTCCTGAGTTTGAGGGCAGCCATCTCTGGAAAGCTCACACTA--------------GGAGGGGTCTCCTCATACATGACTGGCTTCATGCAAGTGCCTTTAACATTAATCCTAGGACAGGATAATGCCTTCTT--CTGTTGGCTACTATGAGCAATGGGGA--AAATTTTGTTTTTCAAAGATGAAATGAAATGCTTATCATATTAGGAGATTTTTGTATTGATATTTAAATGATGGAAATGTATAATTACTACAAGAATACTTTAAAGGATACATTTAACCTAAGCATTTAGTCTAAGAAATGAATAAAAACCCAGCATAAATTTTTATGTACAGATCaatttatcataatat-----atattataatatatGTGTAAGCCATC-TCTACAAGGGGTGCTGTGAGCACACAGACACAGACTAATTATAGTAAAAATAAAACATAACTTCAGCATAATTTATGTTCTCTAT------TAAATGGGGA--------TTTTGGTAATAAAAAGAATACAACATGACTAAATGAACATGGGTGGCTCCTGGGCATGACAGAAAACTTAA-----TAGCTCTTGTGAAAGGT s bosTau2.scaffold889 322108 1162 + 324586 ttttGGGTTAAATACTAATCATTTTTTGCTAA---CATTTTGATAAAGAATGTATTTTTCAAGCAGCACA---AGTTGGACAGCAATAACAAAATACTTGGCTGAGTTGCCCACACCTGAGCTAAATTTTACACAACAGAAGCCCTTCCAATTTCACAGT--AGGATATTATTGTATAAGAATAGCTCAAGATACGCAGCTTTTCCTCTTTTTGGAAATTAAAAAGAAAGATTGTCCTTATCTTCTTTGGGGGGTACATGAATGTCTATATGCCAATTTCCCCCACTTTCTTTC-----CTAAACCA---------AGAAGACAAACAACCTTGTGAAAGAATCTGCCTTCATGCAACAGTGAAGCCTCATGGGCAATTTCATAAAGACCTATCTGACTTACGTGGGCATAACCTGGTGGCTGGTGGCCTTGTGCTTCCTGGAGACAAAGAGATATCCCAGTGTAGAGGAAA--AGAAGCATGAATAAAGAGAGG--GGACAAAGA-ATGGCTTCCACTGAAACCGAGAGCTGAACTGACCACAACCCAAACCCAATACGTGACTGAAGGCTCACTAATGCGACAGTCACACTTCTCTTGCCATCCGTCCTATTGCAACTGAGGGCACAGCTTTCTGGAAAACTCACACTGTATCTGAAGTTTCTGGAAGGATTTCCTCACTTATGATTAGATTCAC-----TAACTTAAATACTAGTCTGTGTGGTGAGTGCTGTTTGTTTGTTTGTTTTTTACTATTACTTACAGAGATGAAAACACAATTTCTGAAGCTGAAATGAAATGTGTATCATAGGAAAAGATTTT-GTATCAATCTTTAAAAGACTAAAATACATAATTAGGGTTAAAATGCTTTTTAAAGCATATTTGGTCTAGATATTTGGCTTAGGGAGATAATCAGAAATAAG-GTAAAGATTTATGTACAGATCAATTTATCTAAACATTACTACTTCTGTAACATTTATA-AGGCCATCACCCAAAAGTGGTGATATGAGTGAAGAAATGCAGATTAGTACTAATAACAAATGAACATAATTCCAAAATAGTTCAAATTCTGTATTAGTTATAAATGACAAAAAATAACTGTGGCTAACAGACAGCAAAGTAATTTGTTGTAAAGATGTGGGTAGATTATGGATATGAAGGAAAAGTTGAATATCTAGTTCTTGTAAAAGAT a score=9655 s mm7.chr19_random 1259549 480 + 2598976 CAGTGAAGGGTT-------AGCATTTGCAGTGTGTTTATCCTGTCTTATTCTCCCACACAGCTGTTCTCACATGGCATCCTCTGAGGTTCTCAGAACCTCCCTCCTTCCTCTCATCCTTGCTCCCACAACTCTTGTTCT---ACTTCAGC----------TTCCTCTTTCTTTCTTGGTGTGCATCGCAAAACTTCAAAGAATTAACAGGCACAATTGGGTTTTCC-CAGAGAGTGGGAAAAAGACAGAGCCAAAGCAAGTATCAGAGGAGGAGAGTAGGGGGAAAGTCTGGGaaatttaaaaaaaatttaataatatCTGTGACATTT---------GAAACTTAAAAGACACTTCAATGTTAAACAGTAGAAACTTGATTAAAC-TTTTATGG-----TCATTACTGGCTACGTGCATAAGA-----TTGACTTCATCTCTATGGTCCTAAAACATATAACTTAAAAGGACTGTTTTATAGTCATCA---ATAGAAATATTGCAGAATTATAGTAAATAATA s bosTau2.scaffold15686 1399 492 - 7785 CAGTGAAGAGTTTACACAGACCACTGCCAATACTTACCTCCCATCTAATTCTCTCACATACCTATTCCCCCATCTTGTCCTCCAAAATTCTCAGAAAATTTCTC--TCCTATGCCTAGTGCCCACACACCTCTTGTTCTTCAACTTCAGCTTTGGAAAGTTTCACCTTCCTTTTAAAATCTGCATAACAAAAGCCCGGAGTCTCTATAGGCAAAATAGAGCTCTCCTCTGAGGATGGG----AGAGAGAGACAAAATAGCTGTTAGATA--------AAGGGGAAAGACTGGGGAAATCCATGCA---TTAATAATAT-TgtaacatttatgagggtgaaaatttgtaaaccacctaaatatcagacaattagaaaatggttaaataaattatggcatatTTGTTAC-AGTTATATGAACAAGACAGTTTTAATTTAGTCCCTGTGTTCATGGAGCTTATCATCTA-------------ACAGCCATTAATGATAAACAGATTTTGGAAATACAGTTAATAATA a score=31964 s mm7.chr19_random 1260826 1082 + 2598976 ATATTATCTTTCTTTATTATTTTCACCCTTCGTAATAAACGCCAGTAGA-TGCCTGATTAGAAAATTGTACCAGTTAATTCACAGTATTTGCTGTCACCCATGCTGTCACC-TGACCTGTGACCCCCACCTGGGGAGCAGCCTCCCCACTTGGTCCATCTCTCTCTCATATAGCCCTGTGGATCTGAATCTGCTCTTGTCTAATTAATTGCCTTCCAGATATATTTGCTTTTCTGTACATCTCACTCGTTGTATATCATTTATACAAGTGTGTGTACAGGTACACTCGCTAATCGGAATTTCACAGCAGCAGCCTGGCCTACTCCTACAGTGCAATT-------------------------CACAGACTCTGGTGACATGGAGCTGACCTGCTCTTCACAACAGAACTATTGAAATTTCTGTCCAATGATGTTGAAGTAAG----TTCACATGCTTAAA-CATGGAGGTGAATAATATTTGATGAT--TGTGCCA--------AAATTTATTTAGCAGGTTTGATGTGCTATTTTTCTT----ACAGAGAAATCTATAGA-ATATTAAAATGAAGTTTATGT--TATGTTTAACAAAAATGAATTTTGCTTAATATAATACAAAGCCATTTAAGGCTAACTTTATGACATGTGCCCCTCATGAAACTGCTAAATACCAGTGAGAGGAGTGAGTAAATTATCATAGTTGATTTCAATTTAGATTATTAAAACATTTCCATAGACATTGAAGTCAGAGTTGATTAAACTTTAAACTTAACTGATTGAAGTATTTATTATATAATGATCAAAAAGTACAGGAAAATACTTTAGCTGATTAGATAATTATGAATAAATAAATACGGATATAACTTAGATAATTTGTTTCAATTATTTTAGTGATTGCTATATGGAAGAAATTAGGAAATT---ATAATCTTGATATTGTATTAAACTGTCAAGGTTGAAGTTTTGAAGATGAATAATTTCGTGATGTATTTGTGGCCATGAATTTAGATATCTGTCTTAATTATTTTTGAGATATTGTTT----------------AAAGAGACAGTTGTGAAAA------------AATCAATAGAAAATGTGAAAATTTGAATGTTATTAGCAAAATGTTTCTAGATCACTTCCTTAGATGAA s bosTau2.scaffold15686 2843 1028 - 7785 ATTTTAACTTTCTTCATAATTTTCTGCATT--TTCCAAGTGTTGATAGAATGTGTAATTGGAAAAAAGCACCAATCAATATACAGTATT-------------GATATCACTGTGTACTGAGACTGCC------GAATTAGCTTCCTGATTTAATAGACTTTTGCCTTCCATAGCTCTATAGATCTAAATGTGT--------------------------------------------------------------------------GTGTGTGTGTATTTATATTA--TAAATGGATTTTTAAAACAAAG---TGGATTATTCCCAAAGCTCAGTTTGTATATGCTTTTCTGTACTGTTAGCATGGACTCTAATGAGATTGAGTTCACCTGCCCTTCAATATATAGACACTACAATTT-TATCAGATGGCTTTTAAGCAAGCAAATTCATGTCCTTAAAATACAGAGATG--TAATGATTAATAACCCTGGGCCATTCAGTTCAAATGTATTTAGTAAATTTGCTGTGCT-TTCCTCTTGTCAATAGGGAAATCTATAGAGATATTAAAATGCAATATATATATTGTGCTTAAAGAAAATAACTTTTGCTCGATACAACACAAAGCCACTGAATGCTAACCTCCTGACATGTGCCCCTCCCTGAACTATCCAATGCCATTGAGAGAAGTGAGTGAATTATCGGGGGTGATTTTAATTTAGATTACTAAAACATTTCCATAGACATAGAAGTCTGAGTTGATTAAACTTTAAACTTATCTGATTATAGCACTTATTATATTATGGTT-GAAGTTACAGGAAAGTACTTCAATTGATTGGATAATTATGAATAAATAGGAAAGGATATGACTTAGAGAATTTGTTTCAATTATTTAAGTGATTGCTATATGAAGGAAATAAAGAAACTGAAGTTGTCTTAACATTGTATCAAATTGTCAGG--CAAAGCTTTGAAGATGAATGGCTTCATGGTGCCT-----GCGATG---------------CCTAATTATCTTCCAGACATTGTTTACTTAGTTTAAGAGAGAAAAAGATAAGGATAAAAAACATGTAAATTCAACTAATAGAAAGGCTGACCTATTGACTATTAC-------ATGTCTCTAACTTATTTCCTCCggagaa a score=32564 s mm7.chr19_random 1262407 1228 + 2598976 CCAAGGGCAGATGA--GGGTCCCTGACCTGTGACCTTGCCCTCTGGCAGACAATAGCTACACATTCCTGTACCCTCTATACTGTCTCACTGT----------------------GCTCTTCAGCCTCTGGTCTAAATGAGTTGTGGCTTCCCAGT------GCACAGCAAGAGAAGGTGCCAGAGATGAAGCTGAGCAGTCAAGGCTGCAGTTCGAATC------CTAATGGCGTCTCTGTGTA--GATACAGAACATGTGAGTTCCGGGA-TGACTGTGAGCAATCAGAGCTTAACTGATT----GACTAGGGACCCAGATTGGCTAGGAAATTCTGTCGTACTCAAA-TATATATCCTAATATTAGAATTTCTGATACAATTAACTCTGCTTGCTGCATAATTTTCAACATGAGTCATTGCTATTTTTTTTCTCTCTCTCTCCCAAGCATCCCTTTCAGTTATGAATCTTTTGGTTCTAACTAATTTTGTCCTTGTTTACTTCTGGGTTAATTATTTGCCAACTGTCT--------------GCATTTCAATGAGGAGGAGGAAACACTCCATAGTGAGGCTGGCTCAATGACTTGGACTTGAACAGAGGTG--------AGGGCTTTTTGTCCCCAGGGGAAGCTAGGAAATGAAAGGG--------TTCTTTTTCTAGGAGTGACAAGTCTGCAGCTGGGCATGTATATATTTCAACCTTT----TAAAATGCATATTTTATCAGAAAGGCATTTTGATGAGGAACACAGTTCCGAAGC---------TGTCCAGATAGCTGTTTTCTTTTATTCTGATTAAATCAATG---CTGATGTTGACACAAGTGTTAGCAGCCCAGAACACAGGTGGTGGAAGATTTTCTGA--------------AACTGGCCATGATAATAG---AGGA--------CCTCACCCACAATTTTCCTTACCTAATGGTTGGCCCTATTTAAAGAGAAATCACTATTTTTATTTTGGAAGA--CAAAAATTTAAAAAAATAAAAGAAAATGCACTACAATATGAAATCCCAAACATGGAAGAGTACAGAAAAATAAATCTGTGT-TTTTAATGATGTTACAT--TGTTTTCTAAAAGACAGAGCCCAATAGGTTCTCAGAAAAGA--GTAGCACACTAAGAGAAAAATGAATATTTTGCCAGCAGAAATTAGGGGAGGA--GCAGGGAAA-AAAATCAATACAGACAT-AAGCATACTT------TTTTAAGCAACAAGAAAGA------ACAACGTTAAGACTCCTGGCATGTCTGTCAGGTTGGAATGATGGA-AGTCATGGGGAACCACAAACACAGAATGAAAATAACAAAAG s bosTau2.scaffold12361 3263 1323 + 16832 CCCAGGGCAAAGCATTAAGTCTCCCACCTCTGGACTTGCCCTCTGGC---CAATTTCAGCAATCACCTCCTCCCTCCCCACCTTGACATTGTCCCCTCCCTCACCCCAGCTATGGCTCCTGATCTCCCGGTCTGAGTCAGCTGGGGCTTCTGAATTGCTAGGAATGGCAAGAGGAGGCACTTGGGGAGGAGCAGAGCAATCAGGGCTGTGATTTGAATTGTTCATCTCTTGGTTTTTTTGTGTACAGGTACTAGAAATATGAGTCAGGAGAATAAATGTGGGTAATCAGAACTTCACTGGTTCTCTAACCAGTGGCACAGATCGGTTCTGAAGTTCCACAGTCCTCAAGCTCTAAATCCCAATATTAGAATTTCTTACACACTTACCTCTGCCTCCTGCATAATTCTGGATGTGAGTCATCCCC--------TTTCTCCTTCTCCCAAGCATTGCTTTCAGTTACATATCTTTTGGTTCTAACTCATTTTGACCCTGTTTATCCCTGGGTTTATTATTCACCAGCCGTCTTCATTACCATTTCAGTATTTCACTGCAGACTGGAAAATATTCCATTGTGATGCTG----AAAGAC-----ACTGAGCAGAAGTGTTACCTCCATGAACTTTCTCTCCTAAGGGAGGCTGGACAGTGAGAGAGAGGGGGCTGTCTGTAGCTGAAAGTGAGGGGTCCATAGTAGGGGCTGTATATATTCCAATCTCTTTCGTAATCTATATGTTTTACCAGCCAGGAATGTTGGCAGTGGGCACCCTTTTGAAGTGGATGAAGGTGTCCAGACAGCTGTTTCCTTTCATTCGGATGAAAACTGTTAGCTTAACATATGCACCAGAACTCCTAGCCCGCCATATAAATTGTGATAGATTTACCTACCGCCATGAACCTGAACTGACTTTGTGGACTGCTCAAGATTGCTCTCCCCTGTCCACATTATTCCTTAGCTAACAGTTGGCTTCATTTAAAGAAGACTCACTATTTTCATTTTAAAGGAAGCAGAAA---AAAATAATCATAAAAGTTACCCCAAAACATA-------------GGAAGAGTTTAGACAAATAGGTGTATATATTTTAAAGAAATTGCACTGTGTTTTCTAAAGGAC--TGCTCAGAGGGTTCTGTGAAGAGACTATAATAAATCAAGCAGAAAATGAATGGTGTGTCAGTAGAATTTAGGGAAGAACTGCAAGAAAACAAAATCATTACAGAGATGAAGCACACTTCAGAAATGATAAGAGAGGAAAAAGAAGCAGCACAATGCTGAAAAACGCAGCCAG------AGGTAAAAGTGCTGAATAGGCTTGAGGAATCATAAAAGCAAAATGGAAAAGACAGAGG a score=6943 s mm7.chr19_random 1318491 678 + 2598976 ACATTACAGGTGCCTAACAGTCAC-------TGCCATATTTAGACAGCAAGGGTATGCAAAATCTCCCCTCCAGT----AGCATCCTAGAGGACAGCATGGCC-GCTGCTCACATACAGGGAAAGGAAGATACACAGAGGCTAGAATAGGA-AGGGTTAGA--CCTAGAGAATTCAGGTCTGCTAGCTCCAGTCCTATGACCCAATAGAGATGAACATGTTATCCTTTGTGATGAGAAGAGGCAGGATTGCCGTGGAGAACCCCTAAGGCAGAGGGTTGCTTGGGG---AACACAGGACTGAGGTAGTGAGAATGCTCT-------AAGTAAAAAAC-CAGA---AAGGACTCAGAGATAGAGCATGA----TTCTGCCCAAATGTCATAACAGAAT------GCCCCTTCTGTAATTCAAAATCACAAAatatatatatatatatatatGCAGCAAAAACATATGTGCCTGCTACAACAGGGGCTGT--------AGTGAGCGGATCCAGAGGACTTCCAAAAGCAGACGACAGTCCTGGCAACAGACAGT---CCTGGCAACAGACAGTCCCGGC-AACAGGGGCCTCC-AGAAGACCATTCTCTCCCCTCTGTCCTCCGAGAACTGGGCCGTTCTCTCTTCCC---------------CACAG-----GTGAGAGCTCAGGGCAATTGCTGCTGCAGCGACAGACAAC--------CACTGTATGTGTCAAGATGACAGGAtctctcattctctc s bosTau2.chr29 32005852 717 + 45822729 acatttcacgagctcaacagccacgcatggctaccatattacaagcccaa----atacagaacactgccaccactgcagaaagttctgtgggacggcactgCCTGCTATTGACAGATGGGGAGAGTGGGGTCTGGAGCCCTGAGAATGGGGGAATGCTGGGGCCCTAGAACGCCCAGGTCTGCCAGCTGC--CCCTGGCACCTGACACCAGCTCACAG--CAACCTTCATGGTGGGAAGGGCTAGA------GTGGAGACCCTCTAAGGCAGAGGGCTGCCTGGAGGGCAAAAAAGGAGTGACGTGGCAGGGACACTCCCGCTTCAAGGCAGAGGACGCACATCTGAGGCTGCAGGGACAGAGTGCAAGAAATTCAGGCCAGAAGCAGCTAGAGAAGAACGAAGCTGCCCTGATGATTCAAAACCACAAAGAGGATGTGCAT--------GCAGCAGGGT--TCTGCCCATGCCATCTCTGCAGATCTCTGCCCTGGGTGGGCAACACCCAGGCAGACCCAGGAGAAGAC-------CAGGAAGCAGACCCTTTGCCCGGGGA-AGATGGTCCCCGCCAGCTGTGACCCCCTAGAAGGGCATGTTCTCCCACTGGTCCCAGGAAA---------TCCCTTCTGCCCGAGAGCCAGTGTGAACACAGCCAGGGAGGGGGCGCAGCCTAACTGCTGCAGCAGCCAAAGACAACGTCGCAGCCAGGGTCAGTGTCAAGACGACAGGAACTGATACACACAC a score=4325 s mm7.chr19_random 1319209 412 + 2598976 AAGCCAAG--------------CCCTAGAACCTCAATGGCTGAATAGGCC-TGTACCAGAAGGACACAAGGAGTGGATCTGCATAATACTCAGGGAAGAAAAAAGTCCTCC-GCCTACGTCAGGGAGGGCCTTAGTAACTGAACCTTCCATCCTCCTGCACCCACATGCTCTAACTAACCTGCCATACACACGAGGCCAGGGACACGGAGTTTCCATCCCAAG-----AACATAATGACTCATAGCTAGGATTAGAGATCTCCACCAGAGGGAAAGCTCTGA---CACTCCTAACCAGGTG--AGGGGTTGG-ATAGTCAGAGA-------GACACACCCGGAAGGACGATAGATATGCTGTCATAAACACTCCC-----CAAAGGGAAAGAGAGAGCTGAACACTGA-----------CCTGCCATCAGTAGTTAAGCGAAggagtt---ctaagatctctcag s bosTau2.chr29 32006623 433 + 45822729 AAGTCAAGATACACAGCAGGTCCCTCTGGACCTGAGTTTCTGCATATGCCCTCCAAAGGCAGGACATCAAAGGTG-ACATGC--------CAAGACGGAAAGAAGCATGCCAGCCCGAAATGGGGAGGACACAGACAGC--AACACTTCTACCTAG------CACACGGGCAAACTGACCCACCAGACACAC-AGGCCCCAGAGAAGCAGT----ACCCCAAGGTGAGAACAAGATGACTCAGAACCAGAGCT-GAGACTTCCACCAGTCAGAAAGCCACGAACACACACAGAGCCAAGGGCCAGGGGCTGGGATATTCAGAGAAAAGAGAGACACACCCAGAGAGGCCATC----TACTCTCGAGAACTCACCAGGCTGTAAAGAGGAAGAGAAAGAGCCACATTAAAAGAAACAACCCCTCCCA-----GGTGAAGAGAAAGAATtttgccaagctcccatag a score=642 s mm7.chr19_random 1319862 647 + 2598976 ggaggaggataacaactggattgtaaaaaaa-----GATTAAAGATAATTAAAAAAAATTCTCACCAAGAAAAAAAGA---------AGAGAGAGAGAAGGAATTCTGCAGAACCGTGCCTGCCAGGACTGTGCCACTGTTATCCCTTTCTTAGGGTCTCATCTCGTGTACAAGCACTCCCACAGGGGTGAATTAACATCATTATTTTAGGACTATGGAGACTAGCCCCAATCTAACAGTCTTCATCCAAGCAAAGAGATCAAGACGCAAATATACATATAGGATGAGACACATGGGAAACCACAGAGAAACACCCATAAGGCAAACAAACACCCAGAAGCAAGTCCTGTGCTG-GAGCAGGAGAGAATGAGCCAGAGGGAAGCACCCACCAGAAGAGGGCAAGAAGCCTTGCTCCTGCATTCCACCAGCCTCATGACGACCCTACC--------------------TAGGCAGAGTTGTAGGTACCCCGG-GCCCAGCATTTAAGGAACCTTT--ATTCTGGGTCTCTTTGAGACTGTGTCTCCAAGAGGCAGGAATCCTAAGATTTTCAAACGCTTGAACTCTCCAGAGCCTAACTCTGGATCTCTCTTGGGCCAACGTGGAAGACAAGAGATGCTTTTCTCTCTAGCACTcaacctgagtgggatcaacaga---acccacatgg s bosTau2.chr29 32007249 532 + 45822729 GGAAAGGGATGAAGACACGAATAAACACAGACACAGGATGAGAAACCACAGAGAAAGATGC---ACAAGCGAGAGAGATCTACGTGGAGGGAGGCCCAGTGAGCGCCGGAGAGACATACCCACAGGGGGCCGGACA----------------AGCCTCCAGACTCGTCCAAAGAGAGACCCACAGAG--------------------TGGGACCAGGATG--------------------CTTCA-------GGGGATGTTAAAACACAAG---AAAGAGAGGGCTTGAGGTTTGGGTAGGGGCAG-GAGACCCCCAGGAAGCAGT----------GATGCCCATCAAGTGTCACAAGCATAGGAGGA-------AAGGTGAGTGGCCACCAGC-------------CTCTGTGCCCACA---CACCAGCCTCGTCCCGACCCAGCTCGGAGACCCCAAACCCAGAATGGGCAGAGCCCCAGGTCTCCCAAAGCCCAGGATCTGAGGGCCCTTGTGGTTCTAGG-CTCATCAGCACTATGTCCCTAGGACTCAGAAGTCCTGAG-----------------CTATCCAGAACGCAGCTC------------------ACCTGGAGA---------------CTCTCTGGACCCCAGC--AGGTGAGACCAAGAGACAGGCCCACCTGG a score=36146 s mm7.chr19_random 1320923 2602 + 2598976 GGGAACTTTCCACTTAT-----------------GGGAGG--GAAAGATCAAAGAGAATTAATTAAACCAACA-------AGACCCAGATGACCTGGATATTGGAGGGATATTCAGAGA-----AAGACATAAGGGGGAAacacacacacacacacacacacactac----------acac------GTGCAGAA---GCTCACAGAGACCCTTGTCAATTCCATCTCCCACCTTTCCC-AGCGTAGGCAGTCCTCTTGGTAAGCTTTATGGCTCACAGCGGGTATCTGCCACCTGTCCACCTGGTACTCAGATCCCAGGGTGTGCACCT------TCCACTGTGTCTGTCCTTCGAGCGTCAGCCATGCCACCACAACT---ACCAGAAGGACGTTTCACCAGCCTC---------CTTTAGCATCCCC---------------------CTCCCCAGCATGCTGGGTTTT----GCTCATTGACTTCTAGGACAGCCATAATCAGGACCATAACTGC-TTCTTGGTTTCCAACTCCTTCTCTCGACTCGGGCCACACACGTTTCCCCACAACT------------CTTTAGAACAAGTGGCAAGCCCTAAAGCTCTAAATTCTCACTTCCAGCAGGAAGGGAGAGTCCCTCTCCCTCCCCTAGCTAAGGGGCCCTCCACC---------------TCTCCTAGTGACAGAGACTGAAGACAGCATTGTATTACCCA-GTGGAAACTTCCC-CATCAGGGCACAACACCAAGGAAAAATTGGCCTT-AGACAGAACTTCTGAGATTAAAACACCAACTCTAAGGGCAGTGTCCTATGGTTGGGGAAC------CTGAG--------GGAGAAGTTTGTTG------------TTGCCTTGTGGGGTAGATTACAGTTTAGACTATACCCTGTGCCCCACCCAGCTCCCTAGTAAGTGCTGCATGTTCGCCCCCCAGTGGTCAAGCCATG-TAGCAAAAAGACTCAGAGCCAGGTCTTCAAATGATGGCTGCAATGCTCCCTCCCACTCCCAGCCTAGCCAGGACACGTAGCCAGGATCAGCTCCAGGCACTTCCCCTTCCCCCAGAACCTCCGCTCCAGGCCCCAGGGACCAGG-CAGGATGCCGCTCCCTGACAGGCCGTATGCAATGCTTTGCCCAGCTCAACCTCCATGTGTGGGGACTATACTCCCAAGACTGCCCT-ATCCTCCTTGAGGGCCTCTAGGT--------CATGGCCTGGACCTGTGCAGGACAAAGGAGCTCACTTGAGTCCATAAGTGCAGTCTCCATACA-CTGACATGGAACTTGTACCCC--------AGAGTAGTCAATCAGTCACTGCCTCTGCCCTCCAAGTCCCGGGAGGATAACAGAGGTGACATATCCAGGTTTACCACAGTGTGAGGACCCCATGAACAG-GACATCCTCTCACAGGCAATAACACCAACTTCACTGAAAGTGAACAATGACTC------CTGTAATGCAAACAGTGACGGGCCCAAGACCAATTATTTGAGCTTTAGCA--CCAACGGA--AACTGGGGCTAGGAAAGAGAAAGGGGGAGCTTCGTCAAAGTACACAGACATTTCCGCAGAA---ACATTGCCACAAC-----AACCCCCGTTCG------GACACTTTTTGGACACACTCAGACATGGACGATACTAT---GATCAAGAAGGCTTTGGAAGCCGGCCAGATGATCCAATGGTCAACTCAAGGAATTGCAAGTTCCTGGGAGCCCTGGCTGAAGCCTG--AAGGGGC-----------------------------CCAGGTGTATTG-CACATTCTAAATTGGCAGCCACCTCCCTTC-----------CTCTAACCCAAGTGAATATAAGCACGTGGTCAGCCCAGCCCCAAGGAGAGAAA-------------CTTGGGGGTGT------------------CCAGGCAAAGATCCCTTCAGAAGTCGGACTAGCTCTCCCAGTTTGCTTCTCTTGTCTGTCTCCAGGCAGTTCCCAAGTTCTGAAAAAGGTAGTGACCACACCCCAGTGCCCAACACA-TCCTCCACTCCCACAGCTTTACCCCAACCCCTCAAACCAGCTCCTCAGGCTCAGAGTGGTGTGCTCTGCCAGAACCCGACAGACAGTTCCAAGTGGAGCGTA-------AGGCCTGTAGGGCTCTG--AACCTCTAAGCAGAGCCTCTCTAGGCCTGAAGTGA-------GCTCCCCGGTCTACTCTTT--------------------CTCTCTCTT-------------------GTCCTTTT-----------------CTGGACTTGGAG------------------------------CTGTGG--------------------AGT---GCTAGGCCAAGACCCTCAGG-------------------------------GTATCACTGCT---GACTTCCAAACCATTAGCACTAAGTCTTGGATGACTCACGTGCCTGTCTCTCTGAATGTCCTGGTTCTCTTCACAATGTCCCTTTGCATAATCTCTTAGGGACAAGAGCTTTAGAAAGGAGTTCAGACATCTTCCA------GATGTCATCCCTACGCCCCCCTCCAGTCCTTTACTAGATCAGCTCCCTTGTTCCCAGTTCCTTTCCCACACTCCCCTTGCCCCATAACTCAGCTCAGGCCGAGGAAGTGGCCCTTAAATGAGGGGTTCCCTTCTACTGCACAATCTGCACACTCTACAGACCAGATACA--GGCCTGCCCTCCCCCACACCCCCATAGTTTTTCAAGAAAAGGAAGCTACTAGTTCATTCAGCTTGGGAAAAGGAA-AAGAGACCCACCCTACCCCCAGAGACTTCCCTAATAGGGC------------AGGACCAAAACAG--TTCTACTCACCTAAGCCATTCTCAGTGTGGG--GAGAGGCCCTAAACATTGCCCACATTGCCCATAGCATCTTC---CTGTGTGCCCTCCCCTCTCCCAGTCACCT s bosTau2.chr29 32008063 2820 + 45822729 GGGCACTTTCAACTTGCATAGGGTGTGTGTGTTGGGGAGGTCGAATTATCATCGAGAATCTG----ACCAACATGTTGCAAGACATGGGCAATATGGGCACTGGTGAGATGATCAAAGACTCGCAAGGCCAACAGACGACCCACCCA-ATGCATGCAGAGACACTCCTGAATCCCCAACCCCTCCCAGCCCAGAGCAGGCTCACAG---TCCCTGCCTCCACCAGCTCACAGCAGACTCGAGTCTGGGCAGCCCC------AAGCCCTGTCCATCACGGAGGGAGCCTGCTTCTTGTTAACCTGGTGTCCAGAGTCT---GTGTGCACCTGCGAGCTCCTCCCTGGCTGCC--TGGGCCGCTGGCCCCGCC--CACACCTCCCACCAGGAAGAAGTTTCTCCAGCCTCATCACCCAGCCCTATCCTCCCCTCCAGTCCCTCTCCCTGGCCCCTCATCACCATGCTGGAGTTTCCCTGCACCTCAGCTTCCAGGGCAGCT----------CCCTACCCCCACCCCTGGGGGCCAGCTGCTTC-CAGGGCTAGGCCCAGAGGTCTTTCTCCACCTCTGTCCCCTGGCCCCTCT----CACTCCCCTAGCCCCAGTGGTCCAAGTTCAAGCTTCCAGCCAGAAGAGAGATTCTATCTTCCTTCCCTGACCCAGAGGGACTTCCTTGTGGAACTGGGGGGTTCTTGGAGTGGGGGGGCTCTGGGGCAGCTTTACATTCCCCATGCGAGCAGTCCCCACACCTAGCCACCTCTCCAGAGAAGAGTGGGCCTTGACCCAGGACAGCTAGGATGAAGACACCAGCTCAAGGATGTGGGGTGGGTGGCTGGGAAGCACCCTGCTGAGTTGAGGACGGGTGAGCTCACTCCCTCTCCCAGTCTCGCCCTGGGGGATAGATTACAGTTTGGGAGCTACCATG------GTCCAGCTCTC---------------------CGCCCAGCGGCCGGGCCCCGCTAGTGCAGGGGCTCTCGGCCAGGC-------------------TGCTCGGCCCAGCTGCCAAA-GAGCCA---CCCCCAGCCTGG-------CCAGGCGCTTCCCCTTCCCCTAGAACCTCCGCTCCGGCCCCCGGGGGACAGGGCAGGATGCCCCTCCCTGA-----------------------------AGCCTCCATCAGCCACGGCCTCACGCCCAGGCCTGTGCTCACCCTCCCTCAGG-CCTCTGGACACAAACTCCAGGGCCTAGAACTGTCCAAGACAGAGAAACTCACTGGAGTCC---------TTCCCCCCGCAGCCCCCATGAAACCTCCACCACCACCACCGGGCATAGTCCCACGACTAC--CCCCTGCCCGCTGCGCCCCAGACGCA-AGCAGAGGTGACGCATTCAGGACT-------------GGCCCGCCAGCCAGAGACGCCCTCTCACAGGTAACATTCTCAGCT---CTGACA-TGAGCAGTCAGTCTCAAGGCCACCATG-AAACAGTGAC----CCCAGAGCTGGGACCTCCCCTACAACAGCCCATCTGGCCGTCTGGAAGCTGAAGGGAGGAAGAGGGGG-TCCATCAA----CACACACATTCCTGCTGAGCCCACTGTGGCCCACCCAGGAGACCCCCGCTCCCCCCACTATGCCTCTTAGGCTCACCCAAGCCTGGAGGAAACCAGTCAGCTCGGGAAGGCCG-GGAGCCCAGCGGGATGGTCAGA------GCCCAGGGAAATGCCAGCTCCCTGGGAGCCTGGATGAAGCCCGTCAGGGGGCAATGGGACAGCAGAAAGCCCTAGCAAACACCAGTTGAAACGTCCCATTC-----------CCACCCCTCTCCAGGGGCGACCCCCCTGCCTCATGTGCACAT--GCCCCTGGTCAGCCCAGCTCCAGGGAGAGAGAGAAGCTGGGGTTTCCTGGGTGTGGTGGGGAGGTGAGAGTCAGCAGGGGAGAGTTACCAGCAGGAGTCGGACTAGCTCTGCCAGTCTGCTTCT---GCCTGTCCCCAGGCGGTTCCCAAGTGCTGAGGAAGGTGATGACCACACCCCAGAGATCCACACACTCCTCCACCTCCACAGCTTCGCCCCAACCTCTCAAACGAGCTCCTCAGGCTTGGGGTGGCGTGCTCGGCCAGGGCCAGCCAGCCCATTCCAACTG-AGCCTAGGAATCCAGGTCGGTGGTGCCCGAGAAACCCCCAGCCGAGGCCTTCCTGGGATGAAGGTGACCCTGGGACCCCCCTGCCCATTCCCTGCCCTTGACCGATGATGGCCATCTCCCTTCACAGGTCTCCCAGGAGTCATTCTTTTGGGTCCCACTTTGAGCCCTGGACCTGCAGTCACATTCCCCTCAACTGGCTGACTCTGCTCCGTGGGTGGGAGGGGAGCCAACCAGAGTCTGGCTGGTTCAAG-TCCTCAGCTCTTCACAAACTTGCCCCGACAAGGACCCCCGAATCACTGCTTCGGGGCCCCCCAGCATCAGCAGTAAGCCC---------CACCTATGTGGCTTCTTATGTGTCCTGGCTTCCTGAACAATGTCGCTGCGTATAACCT-TCAAGGACAAG-GCTTTGGGGAGGGCCACAGACACCCTCCGATCCCCGTTGCCAATACTCCAGACCCTTC--GTCCTCTGCTAGCCCACCTCTCATGCCCCCACCCCCCTTCCCGTCCTCTCC----CCCCCACCTCA-------------------CCCCTCAGCTGCGGGCTCCCTTCT-CTCCCCACTGGGCA-----TACACACCCGAATCAAGGGCTAGCCCAACCCATCATCCT--TGGGGGCCAACGAGAAGGAAGCTTCC---CCAATGAGCTTCAGAAAGGAAGTGAGTGCCACACCCTGCCCC-AGGGATTTCCCTCCTGGGGGCAGAAGAGACAGAGCACCAAAGGAGAATCTTACTCCCCGAATTTAGACCCAGCCCTGGTGAGGGGGCCCTAAA--------ATGCCTTCCAATGCATCTTCAACCTCTCTCCTTTCCCCTGACTCCGTTGCCT a score=3269 s mm7.chr19_random 1323553 351 + 2598976 ATGAATCATTGGATCTTGTGAATTCATCCCA-TCTAGTATACGTTAGGTACAGTA-----------AGATGGTTCCTGCCATT----GCTAAAGTTTAA--GGGCAAACTGTTTCAAAACC-------ATTTGTTGGGAGTCCTTTTTCTCCTGGGAATTCCAGGTCACTTTCCAAGGATCCCCCACCCCC-------ATCCCCCCAACTACCTCCAGAAGCTTTTCTGCAAATCCCCTCCACAGAACAGGGACATTGAGACAAGTACCCCTGGACACGTGTGTCCTCAGAGACAGCCTAGG-----GCCACACCCTGCCAAACCAGGGTGCCAACCCAGACATCATGCGCACAATCTTCTGTGGTCACATTGTGCAGAAGTGACAAT s bosTau2.chr29 32010906 356 + 45822729 ATGCATCACTGTGTTGCCCAAAATCAACCCAGTCTCTCTCACGTTCTAGGCTGTGCACCACAGGGCACACAATCCCTGCAGTCAGAGGCTGGATCCTAGTCGAGGAAACTGTTTCAGAACCCGGAGGTAACTCTCTGGGTCCCTTTTCCTGCAAAGG--TCCAGGACCTGCGCTAAGGACCTCGCTGGCACGGGGAGGATCCCAC------------GGTGCCTTTTCAGAGATCCACTCCGCAGAACAGGGCACCCAGCAGCAGGCTCCCTGGGGGCACCTCACC------ACCTCCTGGGTGGCAGCCACGCCCTGCGA---CAGG---------CACACACGAGGCTCACAATTCTCTGGGGCCACAACGTGCAGAGGCGCCAGT a score=43525 s mm7.chr19_random 1323989 939 + 2598976 CTCCACTCCATTTGACTTGTAGGATATCCCCGGGTCACCCCAAGAGTCTTCAGTGCTCATCGCCATGTACAGCTAGCCCTGATGTCAACCCAACGCCACCAAGGTTCTGCGTCCCCCAAATCT----GCCTCGGCACTGAAAGGGGCTCCA-----GCCAGAGGAGGCCCAGGCTCCCGCACACTGCACATCCCCTCCCTGCATGGGAAAGCCTTACATAACACAGCTCTCTGCACACACCCTAAGCATGTTGCCTTTCCAACCCCACAGTAGGATCTTGCCCC-CCGCCCTCTCCGCTGGCGCGCACTGCAAAAGTGAAGGGTTCCAA--AGGAGAGCAGGGAAGTCCTTCACCTACGCCCTGCG--CTCCGGCCCCCACCGCCTACACACGGCCTCTT-TCCCCCTCCGCTTTGCccctcacccccacccccacccccGAATTCTGGTTTGAATTAGTCACCGGCTCCAACCACTACATTCCTCAGGCTGCTGGAATCCAGCCAGGCGCTGGGGCGGGGGCCATCCCGCCCGGACGAGTTTGGGAGTGGGGTGGGGTGGGGAGAAAGCACCGCCCCTAGAAGGAGCAAGGGAGGTTCTGGGGACTGTGTCGATTGCACAGCCCC-CTCCCCGCCCACCC--AGCGCAGGAATCTCCCTAATTATGTCCCCCACCCCCCCTCCCACTCCCACCCATCCCACAGGGAGGCACGCTGCAAACTTCCAGGCTCCGACGCCCTGGAGAAAGAAGGGAGTTTT-CTGGATCTGGAAACACAGAGGGGCAAGACTAGGGCGGGGCAGTTGAAGGGGAGCTGTTAAAGTCGCCGCTAGGAGCCAGAAAGGGAGAGGCTGGTGGTACAGAGCAGGGTGGGGCCGAGGGGAATCCGGACGCGAAGTTCGAGATGGAGGTGTGGGGAGCCGCGAAAGACAGCAGAGGGGGCACGCGGTGCAGGGGCG s bosTau2.chr29 32011300 867 + 45822729 CTTCTGCCCATTAGGCTCCCCTCCCACCCACGGGGCA------GAGTCAGCCTTGCTCAGACCCACGTGT------CCCTCGTGGC----CAGCGACGCCAAAGGGCTGCG-CCCCCGCATCCCGGGGCCCTGGCACTGCAGGGGGCACCGAGCCCGCCAGCGGAGGGCCAG-CCCTCGCGCACTGCACACCCTCTCCCGGCATGGGAAAGCCTTATATAACACAGTTCTCCGAACACACCCTAAGCCCGGAGACTTTCCAACTCTCCAGCAGGACCTCGCCCCTCCGCCGTCGCCCCAAGAGCGCGCCGCGGGAGCGGAGGGGTCCGGGGAGGGGAGCTGAGCCCTCCTCCCCCTACGCCCGCCGGACTCCGGCCCCCGCCTCCCACACAAGCCCCGTCGCCCCCCTCCCCTTTACCCCTCGCC---ACTCCT--CCCCGAGTTCTGGTTTGAATTAGTCACCGGCTCCAACCACCACATTCCTCAGGCTGCTGGCGCCGAGCCAGGCTCTGGGGCGGGGGCCATCCCGCCCGGACGGGTTTGGGAGTGGAGT----TGGGGAGAGAGCGCCGCCTCT-GAAGGGGAAGGGGCGGTCCCGAGGGCCGCGCCG-CTGCACAGCCCCACTCCCCGCCCACCCCCAGTGCAAGAATCTCCCCAATTATGTCCCCCACCCCC------ACTCCCACCCGTCCCGCCGCGGGGCGCGCTGCAAACTTCCAGGCTCCGCCGCCCTAGAGGAAGAAGGGATTTTTTCTGGAGCTGGGAACACAGAGGGGCAAGACTAGGGCGGGGCAGCCGAAGGGAGGCTG----AGGGGCCGCCGGGAGCCAGAAAGGGAGAGGCTGGTGGTGCAGAACTGGGTGGGGCCCGGAGGACTCGGGACGCGAAGT----------------------------------------------------CAGGGGCG a score=50680 s mm7.chr19_random 1325145 1858 + 2598976 GCCCCAACTCCGGAGAAAGAGCTTTACTCCCGAAG-CGTGACGCGTCGCCTGCCC-CGGCGGCCGCAAGCGGCCAGGTTTGCTCCCAACAGTCGGAACCCTCGTAGTGACACTACCGCAAATGCACCTTGTCCGAGTCC----------CTCTCTCCCCTGGTCGCCCGAACCCTGGCCCCACACCTTACCGCCCAGCGCTCCGCTTCCCTACCTGCGGGCTCAGCCCCAGGACGCAGCCATAGCCGGCGAAGGGCCCGAGGTCGCAGTGCTG--ACTGCTGGCGACGGCGAGCCCCAGTCGGGGCGGGTCTGGCAGGGCGGACAGTGCAGTCCCCGCGGCAGAGCTGCTCCAAGTGGCCGGGCCCCCGTGCGCGGAGGCGGCTCTTGTAACT----------CGGGCGGGTCTGCCCGGAGCTGTGGGGAGAgggcggggccgggcggggcccgAATAGGGCAAGGACCCGAGAGCACGACTAACACTGAAGCCACCCTGGAATGGGCCGGTGAAGGGAGA---AGGTTGAGGGGGCTCAGGGACGAG--------GAGGCGTCGCCTTTTCCCCTCCCCTATCCCATCTATTGCTC-------CTGTCCCGGCTCTGGATCTTCCCACCCCATTTTAAACAGTGTGTGTGTGTTCACCGGCAAGAAATTCCTGGAAGCACGCAGGGGCACAGATTCACAGTCGGAATCCAGAGTCAACCTAGTCTGCAG--AAGAGCCAAGAAGCTCAG-----------------ATGATTCAACCTCGACCTCCAGCCTCCACACAGACCTTTGAGCTTTCTCTCAA----GCTCAGATACAT--TAATCCCAGGCCCCAGCCTCCTCTCCCAGTTCCCAGGCTTCTTGCAGCCTCGCCCCGTTCCTCG--------------------CCTTCAGGCTCTCTCCTCTTCTACAAAACACACTGACTCTAAGACTTAGATCCGACCCCTAGGAAT-GGAGTCACCTATGCACCA--CACCACGGTGCTGTTCT--TCATTGCAGCGACAC--CAGTCAGGCCTGCAGCTGTTGGACGCACCATGGAACAACTCACTCTCTCCTGTAAACTCTGTCCCCCATGCCTTTTGGGTATTTTATTTGGGGGAGGGAGCACAGActgtgtagcccggccatcacagaactggctagaactgacagccttacagattcccctgcctctgccaccctgggactaaaggcatgaaccactatgcccCAGTAAGCTTGAGGAACCCAAGATCCAGCACTTTCTTTGCATTCCCAGGCCTTCTGCGCCTCTCACAGCTCCTCCCCCATATTTCCATTTGCAAGTTGCTCCGCTCCCCAATTTACAGCCATTTCCCACAGCCACTTCTAACTCTATGTGGATTTTATTAAATGCTTAATGATGGGGTTGCAGAGATG----TTCTGGCTGCATCCCCCCTCCGCACCTCCCTTTTTCTCCTTCCCTATTGAGTTC---TACCCTCTCTGGCAGGTGGCTACCCAGCTGCCCAC-----TCCAGTTTCCCTTCCTTCCCAAATGCCCCAA----GAGGCCTCAAGCTGGAGAACTGAGA--CCTTGGCCTGAGGCAGGAGCACCTTCGCTCCAAGATCATGAGTGGGCTGGGGCTGAGACCAGCCCTGCCCTGTCCTCTGAAATGGCAAACATGTTTGCAGGCTAAAAATAT----CAGCCAAGTCTGCTGCCAGCCCTGGGGGCTGTGT-CCAGGTCCAGTTACC-ACACAGGGTACAGGCGATGGGGGGAGGGAGACAACAG--AAGGGAGTGACAGAGA-ACAGACACAGATGTAATGGACACACCAGGGTGGAGAGAAATGTAGGTAGAAATTCAGACAGGCATGGACATGTAAAGAC----AGGCAAAGCAGAGACTTGGCTACTAACATTC-------ctctctctctctctctctctctctctctctctttctctGCCCCTC s bosTau2.chr29 32012264 1689 + 45822729 GCCCCAACTCCAGAGGCAGAGCTC--CTTTTGAGGACACCACGGTTGGCCTCCCCGTGGCGGCCCGGGACTGCCCACCTTGCTCCAAGT----TGAGCCTTCACAGTGACACCCATCCAAA-GAGCCTCGCCCAAGTCCTGCCACCCACCTCCCCTCCCGCGTTCCCGGCGTCGCGTTCCCCGATCGCGCCAAGGTGCGCCGGAGGCCCCTACCTGCGCGCTCAGCCCCAGGGCACAGCCATAGCCGGCGCGGAGCCCGAGGTCGCGGTGCTGCGGCTGTTGCAGGCGGCGAGCCCCGGTCGGGGCGGGTCCGGCAGGGCGGGCGGTGCAGTCCCCGCGGCGGAGCTGCTCCGAGTGGCCGGGCCCCTGCGCGCGGAGGCGGCTCTTGTAACTCCGGCTCCAGCGGGCGGGTCTGCCCCGAGCTGTGGGGAGAgggcggggccgggcggggccggagctgggctgggacgggcgagccgggccgACCCTGCTGGGACCCGAGAGCGGGCTGCTGGGAGGGCAccggggccgcggggacccgggggcgcggcACATCCGAGGTGCTGCCTTCCCCAGCC------CCCATCCACTGCCCACCCCGGCCCCACCGGGCCTGGATTTGCC--CCCTGACTTAGGCGG-----GTGGCTTCTTCTGCAAGAAACTCTTGGAAGC-----------------------TGGACCTGCAAATCAGCCCATTTTGCAGGAAGGACCCAAGGGGTCCGGCGCCTGCAGGGGCTTGAGTGATTCAGCCGCGACCTCCAGCCT-GAAGCGGACCTTTGAGTTTTCTCTCAACGCTGCCCACTACCCTTCTAATCCTAGGCCCCGGGTTCTTCACTTGGTT------CTTCACGCAGCCGCG-CCCACTTCTCGCCCTCCCTCTTTCTGGGCGCCCCTCAGCCCCTCCCCGCCCCCAGA------ACCGGCCTGGAGATGTTGGCCCCACCTGCTGGAGTCAGGGTCACCAGCGCCCCACGCGCCACCGTGCCTCTCTGGCCGCTGCAGCGACACGGGAGTCAGGCCCGCA-------------------------------------------------CCCCTTGC------------------------AGGATCAGAGTCCGCGCTGCCTGCC--------------------------------------TCCCTGTCCC--------------------------CCACTTTTCTCTA-----------------------------TTTC------TGCTCGGACCCCCT----CCTCCACCGCCCCACTCCC-------------CTGGACGCTGAGTTTCCAATTTTACAGCCATTTCCCACAGCCACTTCTAACTACACGGAGATTTTATTAAACGTTTAATGACGGGG-TGCGGGGGGGGGCCTTCTGGCTTCACCCCCA------------------------------TGAATCCTCTTATCCTCTCTTTTGGATGACCACCCA-CTGCCCACGTGGAGCCAGTTTGTCTTTCCTCTGGAATGCTGGGGAAGTGAGACCCCAGGCTGGAGACCTGAGAAGACCTGGCCCG--------------CTGTTCC---ATCCTGAGTGGGCTGGGGCTGAGACCAG--CGGCCCTGTCCTCTGAAATGGCAAACATGTTTACAGGCTAAAAATACCCAACAGCCAACTCCGCTGCCAGCCCTGGGGGCTGTGTCCCAGGTCCAGTTACCGGCATAGGGTACAGGCG-TGGGGGAGGGAAGAC-CCAGCCAAAGGAGCCACAGACAGGCAGGCAGGCAGATAATGGACACAGAAAGGTGGAGACACGTGT--GTAGGCATTCAGACCGGCACAGACATGCAGAGACACATAGTCAAAGCACAGACTTGGGCACTGGCAATCTCTCATATTTtctctctctctctctctgtctctctctctctctctgtctctc a score=4302 s mm7.chr19_random 1327790 119 + 2598976 TAAATAGCGTTTATTTCACCTCTTAAATATAGACCAAGAATA-AAATGAAGTACTCTGCAATCCTACTAG-CTAGGTAATCCCTGTT---------GACATTAAATCAATGCCTCCGTAATGGGTCAGGG s bosTau2.chr29 32014265 128 + 45822729 taaataaCATGTATTCAGTTTTTTAAATATAGACCAAGAATACAGATAAAGTGGGCCGTGACCCTACAAATCTGATTAATCCTTGTTGCTGTTTCGGAGATAAAATCAATACCTCTATA--GGGTGAAGG a score=14228 s mm7.chr19_random 1328376 621 + 2598976 TCATTTTATTTTTTGAAAGAACAAGT-TTCCTGATGCATGTTCAAGTGGAAATTGATTTATTCCTAGGCTTTCAGGAAGGTGACTATGATGTGATGCAAGCC-CAAAGACACAGGGTATCTGCAAGGTGCATTCCAGGCAGGAGTGTTAGAGGAAGGAGGCTGGCACAGGAGAGTAAGAAGGAAATGAAGAGATGCGGGCACCAGGCACCTCAACTTTGCCG---CACTCTGCATCTCC---------AAGAG----GGACAGCTTCCTGGGCTCTGAGCCAATTGTATCTGCCCCAGTGTTTGTTCTGGCCACCCTCTTGGTCAACAGGGAAGAAGGCAGGAGGACATGGCTGGCTTTTGGAGC---TACAGAACAGGGATTTCTGTCCAGACGCTTCATTCAGGGTTAAGGATGTCAAGATTGCCTGGTCAGGGCATGGTCTGGGAACTGGCTCCTGTCCAAGTCTAGGCTAAGAGAACAGAGAAAGGATAACGTCCATCCTTAAAATCCTTGAAGATCATGATCGTGCAATTGGAACCAGACATGAAGTTTCCTAATCAGCCCAGAGGAAGGGGTTGTTTTCAAGTTTTCagacaggtgtgatgctggttccatgactgcgaatctaagtgctcaatgg s bosTau2.chr29 32014518 559 + 45822729 TCATTTGGTTCCTTGAAAGTGTGAGGGTTTCCAGTGCATGTTAAAATGGGAGCTGATCGA---CAGGTTTTTCAGAAAGATAGCTACGATATGACATATGCCACAAAGATA-GGGGTCTGCACAAAGGGCCAT------GGGAAT-TTAGAGGGAGG-GGCTGAAACAGGAAAGGAAGAGTG---TGGGAGGGTGTGAATATTGCGC-CTTCGACTCAGCTGGGACTCCCTCAACCCCCCAGGAGTGAAAGAGCAGAGGCTGGTGTCCTGGGCTCAGAGCCAACT-TATCAGCTCCATTGTTTGTTCTGGCCACCCTCTTGGTCAACAGAGAAGAAGGCAGGAGA----GGCCGGTCTGGGGAGCAGCTGCAGAGCAGGGATTACTGTCCAGGTACTTGGTTCAGGGGCACGAGTGTCAGGAT-ACCTGGTGGGAGGTGGTCCTGGGGAGTGGCTCCTCCCTGCTTCTAGGCTAGGAGGATACAGAAGGGGTAAACTAGACTCT---GCCCCTAAAAAGCCATGACCCTATTTGCCACACCAAAGCTGG----------------CAGGGAAAGGGAATATTTTCAA------------------------------------------CAGTCTTCAATGG a score=4405 s mm7.chr19_random 1329138 290 + 2598976 TCCCCATCCCACGCCACCCCTCCTTATCTCACCCctaccatgatgcccactgtatgtgattctgcagcagat-tttcacaggttagctcacttagttctcacataccctgagaaggaggtcctcgataaggaaacagcctcagag-gggttgctgatttaccttaagtcacacagct----------ggcaaaggaaagattctcactcacatctacactccttaaagGGA-----------TTTCCCTCTGCATGTGCTCTAGGTGGGTGGGTGGGAGGCACTGGCAGGCATTCAGCAATCGCTCAAAACCA s bosTau2.chr29 32015143 281 + 45822729 CCCCCGTCTTTCACCCCTCCTCCCCA----agagctaccttcatggtgatcttgtctgacactgctgtaggcacctcgtgtgtcagcccatttaatcctcacaCGC----------AGG--------AAGGAAATGGTCTGGGAGAGGGGCAGTGATTTACCTAAAATCACATAACCTCCTTCAGAAGCCGGACTCAAAGCtcccatccacatctaagctccaggagggcaggcattgtttgtttcctgctgc--gtactctatgtctacag--------cagtggctggcacctagcaatcacgccagaaca a score=5799 s mm7.chr19_random 1329562 258 + 2598976 TCCAAAAACCCTTGCTCCTTATACAA--ATGTCTTGCCTCTCTCGAGAGCCTTCTCTAGACTGTCAGCCCCTAGGGAACAATTCCTCTACTTACAGATCTTTGTTGCAGCT--GCACAAACATTATTATCCATCCAACACTGGGCCCAAGG-ACTTGTCAGT--------------AGGTAACAGGGAACTCAGCAGGATGGAATCCCTGCCCTTCAGGTACTTAGCCCAGAAGGA-ATGGCTCAGAACCCT---TTACCTTGTCTTCTCAGTTCCTTGCC s bosTau2.chr29 32015626 260 + 45822729 CCCCAAAGTTCCTGTTCTTTATACAACAGCATCCTGTACCCCACGAGGTTCCCCTC---ACTCTCAGCCCCCA----------------CATGTAGTTCTCTCATGCAGCTTTGCacaaacatt-tactgtgtccagcactgggccaggggtaggtgatggtggtggtggtggtacaggtaacggagtccttgacaagatggaatccctgcccc-caggtgcttagtccagaaggATCTAGCCTCTGATGCTAAGCTACCTTGTACTGTGAGTCCCATGCT a score=23368 s mm7.chr19_random 1329894 654 + 2598976 CAAGCGTCTCTCTCAAACGCACACACTTTAGAATGGCCTGGGTTCAGGTCAGCTGTAGGAGGGGCACTGCATCACCCTTCGGAGGTGCCCCACACCA----GTCATCCCGATTCACAAAGCAAGCTACATGAGCTCCAGGACTC---ATCACTGGGATAACCCAGCTTC--CAGGAATGACGCTCCTACCCTGGGGGGGATTCCCTGAAATGAAGGAGTCATGAGTATGTGTGTGATGAACCTTAGGCTCCTAGGTTGCCAAGCAACACGGTTATGTTTTGTTCCTATTATGCCTGTTTCCATAGTAACCACAAAGGGGAGCTCTGTGGATGGGCCGCCTGCCAGGGGATTCCCCTTCCCCTCCCTTCTTGCCACAGTCCCTTTTTCTGAAACCAGTACAT--TAAAGAAAAAAAAA------------AAAAAACCCAACAGCTTTTTAAGTGTGATCCTAGAAAGGAAGTCAAAGTGTGCTGTCTG----CAA----TTTAGAAACATGCTCCTTCCCCTATTGAAGGTCCTTTTGGACAACACCCTTAAACACTGAAAAATGACTGGCAACCC--TTCTGAGTTCCACACAGGGT-TCTCCCAGTGCCCACT-TCCACCCGCCAAGCCCCACC----CAGCACTAGGAGACCCTGTTAAG---CAGGCCCTTCTCCATTAACTCTAAGCTCTT s bosTau2.chr29 32016002 681 + 45822729 CAGATTTCCCCATCAAA-GTAAGAGCTACCCAGTGATCTGAGAGGACTTCAGCCTTCCCGCTGGTCCTCCACTGCCCTTCAGAAGTGTCCCACACCACACAGTCCTCCAGACCCACTGGAAAAGCAAGGTCAGCTCTAGGACTCGTCATCACTGGGATACCCCAGCTTCACCAAAAGTGCCACTCCCTCCCCGGGGG---TTCCCTGATTTGTAGG------TAGTATGTGTGTGATGAACCCTGGGCTCCTGTGTTGCCAGGCAACGTGCCTCTGTTTTGTTCTTATTATGCCTGTTTCCATAGCAACCCCAAAGGGGCGCTCTGTGGGCAGGCCCTGTGCCAGGGGATTCCCCTTCCCTTCCCTTCTCCCCACAGTCCCCTTCTCTGAAATCAGTGCATGATGAGGAAGAAAAGATGCGATTGCTCTACGAGTCATCATGGCTTTTAAACTCTGATCCCAGGAAGGAAGTGAAAG-GTGCAATCTGTTCTCAATCTCTTTGAAAGCAGACTTTTCGTCCAGTCGAGGGCCCTTTGGCATGTCAGCCTTAGGAGCACAGAAATTACTGTCACCCCTTTTTTGAGT----CACAGGGCATTTCCCAGACCCCCCTCTCCACCCTATACAACACACCAGCTCAGACATGAGCATCCCTGCCAAGCACCAGGCCCTTCTCCATTCACTTTCAATTCTT a score=53631 s mm7.chr19_random 1330548 1940 + 2598976 CTATCCTATCCTCTTTCCCAG---------------------------------CCAACCAACATTTCCTAAGCAACTCTCAAACTCTGAACTCTTCCCTCTTAAGAAAAATACAAAACCAAAAACAAGATCA------CTTTTCCCAATGCAGTACAAATCCCAGCCTGTAACTAAC-CTCGGACTTCAAATAAGGACGTCCTGAATTGCTC--------------TACTATAGGGAAACCCTCCATGGCACTGGGTCCTAA-TGAAATCTTTAGGACCAGCTTAGAGTTCAAGTTAAAGCTGGTTAG-------GAAACAAGAATGATGGCACTGTCTTGAAAGAC---------AGAAGTCTTAGAAAGACTATCTGGAGAAAGGAAAAGAGCTAAGCAGAGGGAAGG--------------------------------TGGGTACCCACA----CCAGCAATGGAGAGACTTCAGTCATGGGTGTGCTGTTGGAGATCAGGAAAAAGAAACC------------------GAGGCAGAGCATGATTGCTTAAGA----GAGAAGAGGGGAGGTAAGGAAGAAGATAAGCACGCA-----------GACTGGAAAAGCAGTGTTAT-AACAGAAGCAAAGAGAGGGGGCTAGAACAAATAGAATTAG-------TCCAGCCTGCTTTCCCTCCCCAAAGGGA-----------CAGGGAGGAGCAGGGACTCTGGGGAACACCAGTCCT---------------GACTCTTCCTTGGAACCA-GCTTTCTAACTTCCTCTGCC----------TTCCTGGGGGAAAGGAATGCCAGCCTGGGTTTCCCTCCC--TCTTCTGTTCACACTTCCCCAAGCTCAGCTTAA---GATCAGGCTGAG------AAGGAAGGGCCTAGGCTGCCCAGAGCCTGAGTCACCACATAGTTGAGGTTCCTGTCACTC--AGCCTTGCCTCTGCTACACCCTATGCCCTCTGCCCG----CCCCAGGACTTAGATTGCTGTAGCTGACCCTGCCCTGGGACTGGCTTCACTTCTAGGCTTCTTAACACAGAGCTCGGGGGCTGCTAGAACCTTTAGAAGCTA-------CCTACTCCCTGCCTCCAAAATTT-GTGTTCTGTATCCACTGTAATTACCATCACCTTCTGAGAGGAGCATTCCCCTAC-------TTAGGAGCAAAGGTGACTCAGTTT-GTGGCTGCAAGAAC-GGAGACTTGGAAGTATGTG----Tgataagtcacttcccctctccgggctccagttcattggcatgtgagataaa-gaatgacttgggatggtctTACTGACAGCCAGAGTGAGGTACATTCTGTAAGGCTGAGTCAAAGAAATGGATACTTACTATTTGAAGAGAGTAGGATAAAAACCGTGTGTTCACTAGCCCCTGTCCTAACAGGAGAGATTGAAAGGGAATGGGTGGGGCAGAGCCTGGCGGAGGCAGTAAAGGCAGCCACTGTAAAGGCAGCCAACACCCTAGG-AACTGGGTGACTCAAGT-CCCACATGGTAAAGGACTGGCTGGAAAGTGCATTATTGCTCTGCAGTTTGTGAGTCAGGAGAAATGAGGATCTCCTTG----ATGACTGGCTAGGGTCCTGCTACAACAAACACCCTCCTTACATCTACAAAGTTGTCAGTCCCACGTCACCACCACCCCCTTCCTATGATGGGAG---------------CCTGCCTCCCTC----------------------TTCTTCAGCCCTCGAACCC--AGTCCTCTTTAGCCTCCACCAGTTAGTTCCCTCATGCCCTGCCATGCTCCCAAATG---CCATTAGCTCTGCCCATCCTCACTATCCACCCCCAAACCTGGCAGAACCAGCCAGATAATTGCAAAAGGGCTGAGCCAGC--TAGAGGCTTTCGCATGACAGCTGCTGCTGCTGCTGGTGGTGGTGCAAGGAGATGGGACAGCTGGAAATA----GAGGCACATTCCATAGAAGATCCTATTAGAAAACAGTCCCA---ACAGCCTGGCCACCCCAGCTCCTGGCCTGGGCAGTATCAgggatggggatgtagttcagctggcagactgctttcttagcataaaaaagccctgggttcagctaagcagagggaagccattatataagccaggttcaggatcacacac-----ctgtaatcctaa s bosTau2.chr29 32016833 2047 + 45822729 CTAATCTATCATCTTCCCCAATGGAGCAGCAAGTTTATTGGGTGATTCTGGGATCCAAACATTATTTTCTAAGCAATTCTCAAACTCCAAACTC--------------AAACTCAACATAGGAAGCCAAGTCAACCCATCCTCCTCCAGCTCAATTCAAATCCTAGCCTGTATTTAAAGCTCAGGCTTCAAATAAGGAGTTCCTGAATTGCTCAGATCAGACAGCTGGGATACCGGAAACCCTCCCATTACACTCAGTCCTAATTGAGATCTTCAGGCCCAA-GCAGAACCCAAGTTAAAGCTGATTAGAGAACAAGAGACAAGACCCAGGGCCCTGAGTAGAGAGACTGGGAGGTAAGAAGGCAAAGAAATGCTGTCCGGGCAAGTGAAGGGGGGCAAAAAGGGGGCAGGGAGAGTGGGGCGGGAGGATGCACAGTGACAACTGGATTCCTAGATGGCCCTGCGCTGTTGGGGCTAGGATGCTGGGGGAGCAAAAAGATAACAGGAAATGGGGACCCAGGATTAAGGGAAAGAAGTGGCAAAACAGGACTGAATGAGACTGTCAAGGGAGGGAGGGAGAGAAAAAAAAAAAGCCCAAAGCTGAGCTGGGGACTGGGCGGATGGACTTGTAAACAGGAGCCGAGGGAGGGAGCTGGAATGAAC-GAAGCAGCCAACGCCCCAGCCAGCTCCCCTCCCCAGCAGGGAGCGGGGAGCATGAGGGAGGCGCCGGGA--GAGGGGAGCACCAGTCTCCTCTCCCCTTTTTTGGACTCTGCCTTTCTCCCACACTTTCCAGATTCCTCTGCTTTCCCCCCAGTTCCCCGGGGAAGGGGAGACCAGCCTGGGCTTCCCTCTCCGTCCTCTGCTCACACTT-CCCAAGTCCAGTTTAAGGGGATCAGACTGAGCGGGGAAGGAAGGGGCCTAGGCTGCCCAGAGCCTGAGTCACCACATAGTTGAGGTTCCTGTCACTCGAAGTCCCGCCTCTGCTACACCCTGTGCCCTCTGCCCGCCGCCCCAGGGACTTGGATTGCTAGGGCTGACCCTGCCCTAGGACCTGCTCCACTTCCACGAGCCTT-ACTCAGGTC---GGGGCTGT-----CCTTCTCGGGCTGATACCACCCTCTTCCTGGCTTCCAAAACCTAGTGTGCTTTGTCCACCA-------------CTTTTGGGAGAAGCACCCTTCTGCTCTTTTTTTGGGAGCAAAAGTGACTCAGTTGAGCGGCTGCAAGAACTGTGGAAAGAGAAGCATGCacccctgataagtcactt-ccctctctggactccagtttcctcttaggtgaaagaaagggactacgtgctgtggtctc--------cca----gaggtacattctgtaaGACTGAGTCAAAGAGATGGAGAGCTGCTA-TTGAACACAGTGGGATAAAAGGGGTGTGTTTGCTAACCCCTGTCCTAACAGTAGA-----------AGTGGGCGGGGCA----TGGGCACAGGCAA-------GGCCACCGT-AGGGCAGCCAACACCCCAGGCAACTCGGTGACTCAGGTCCCCGCACAGAGGCCGACAGGCAGGAAGGCACCCCGCGGCTCCCC----TGTGAGTCAGG-GAAATGCAGATCTCCGTGGAGAATGACCAGCCAAGGTCCCGCTATAACCAACTCTCCCTTACAACTTAGAAAGCTTCCAATTCCA-GTGTGGGCCCCCGCGTCCCTTTGATGAGTGCCCTAACCTCCCCGACCTGGCTCCCACTCCTCCTGCCTGGCCTTGGCAATCCTTCTGCCTTCCACTCCATAGCCCTCCCTACCCTCCAATGG------CTCCCCTGACCTGCCATGTCCCCTCGCTTACCCCTTGGCTCTGCCCATCCTCACTATCCACCCCC-ATCCTGGCAGAGCCAGCCAGATGATTGCAAAAGGGCTGAGCCAGCGGGAGAGGCCCTCACATGACAGCTGTTCCTGCTGCGG-----------AGGGGAGGGGGCAGCTGGAAGTAGAGGGAGGCACATTCCACGGGAGATCTGATCAG-AAATAGCCCCAAACACTGAATGACCA-TCCAGCTC------------------------------TGGCTCAGCGCAAAGCCTGC---------------------------------------------CCATTGTATAAAACAAAGTAAGGTCAACAGGCTGTCTTTGGAATCCCGA a score=26908 s mm7.chr19_random 1332566 1015 + 2598976 TAAAAAACCAAACAAAA--CAAAAACAATTATTATCAACAGACTCCAAAGTCA-----GATACC----AAAGTAAAACAATACTATGTACACAAGGTTTTCTTCCTCTTAT----GATTAAAGTGA--CTAGTGATACTCTACAGATGTCCCCCGGAGAAGGATC-TCTAC-------CCCAAGCCCTAGGCACTTGAGCAC-AGGACATCCCAG-AACTCCACTGGAGTTAAGAGACAGCCTACTCTGGGATCCATGCCAGCCTGATT-TAGTACACAGACAGGAGCAGGTGG--TAGCTTGT-----CTTTCAGGGGCATCAATATTTCAGTGGCACAGCATTAGAGGAAGGGAGTAG--GGTGGGTA-CCCATAACTACATTCACACACACAAAGGACCAGAACAAACTA-----------GAATATTATACCTTTGGT-CTCCCACTGTGAGAGCCTGGGCAAGCTATGACTTCCTAACAGAAGCCATCTGATATATAGAGGGA-------CACTCTAAGGA-GTGCT------GGTTGTCATACAAAC-----TATTAATTTCA---------GGGTGGGG---CCAAGACACTT----------------ACACAC---ACACACCCCTGCACCTTTCAAAGGGGGAAGTGGCACATTTGGGGCATGTGGGCAGCTGGTGGGCTGAGTCCAACCCAGGGAGAACAGCAGCTGTCTAGATATAACTCAAGGCGGGACATAAATGGAAGGAATAAAAAAAAAAGCAATCTAGGTCTATCTTGGATGAACTTTAAAGAATCCTAACTTTTT----AGTAATTTATGCAGAATTGCCAACAAAGCTAAAATAAATAGCTGCTTATGACCAGAATCTACTGACTTATCTACAAACTAAACCAAGGCTCTGCATTCCCACTCATACTCCAGACTCAGTAAAGCTTCT-----------GAGGAACTCCAACTCTAGGCCCTGACCCATTCTCTTGTTCTTTTCAGCCTCCATCTG--AGCTCTGAGCTTCTGCCTGTTAAGTGGATACAATGGCCTTC------------------CTTCCAGGACCTCAGCCTG--------------ACCATTCCCAACACCCCC-TCCCCTTCTGCCCT-TGACCCCTAATTTTGCCAGCTTG s bosTau2.chr29 32018926 1125 + 45822729 TACAAGAACGAAAAAAATCCAGGAAC-------GTCTAGAGA-TCCAGGGTCACGAAGGATACCTTTGCCATTGACCCAGCCCTAACTACCCAAGACATTCTCCCTCTTACAAGAGATTCAAGTGAATATAGGGTTACTCTCCAGCAACCGCC---------ATCACCTACCACTCCACCCATCCCTCGGGTGCTGAGGTACTGGGACACCCCAGTCAGTCCACTGGAG-TAAAACACAGCCTCCTCTGGGAGCCATGCCAGCCTGATTAGAGCAAACAGACAAGAGCAGGTGGCATAGTTTCTCTAACCTTTCTGGAGCGCCAATATTTTAGCTCCATAGCATTAGGCAAAGAATAAAGACAGTGGATGCCCCAGAATGACATTCTGACATACACAGAACC-GATCAAATCACGTGGGGGAAGTGACAGTGTCCCAGAGGTACTGCTGATGGGTGAATCAGGG-AAGCCACACTCACCCAGGAAAATCCATTTCATGTTTGGAGGGAAAGTTTGCATTCTGAGGACATGCCATGAAAGGTTGCCATGAAAACCACTGTATCAGTTTCAGAAATGACTGGGTGGAGTCTTCAAAGCACTTCATGCCTCTCTCTTCAACATTCTAGACCCTTCCCC-CACCCTTCAAAAGGGGAACTGGCACACGTGGGGCATGTGGGCAGCTGGTGGGATGGGTCCGACCCAGTGTGAGCAGCAGCTGTCCAGCTCCGGCTCCAACCAGGACAT--------------GAGGAAAAGATAATCTAGGTCTTTCTTGGAAGAACTTAAAAGGCTTTTGACTTTTTAATAAGTGACTTAAGCAGAAGCACCAACAAAGCTAAAATAAATAGCTGCTT-TGACCAGTATCTACTGGTTTATCTACAAGTTAAACCAAGACTCGGC-CTCCCATTGACACTCTAGCCTCTGTAAAGATTTTATCTGCAGTCAAAGGCACCTC----TTGAGCCCTGGCCCCCTCTCCAGTTTCTCACCCTCTCTTTCTGGAGGCGCTGAGAATCTGTCCAGTAAGCGGATGAAACAGCCTCCTCTTTCCCCCATCCCTTTTCTCCAAGACTCTGCCCTGTCCTCAGCTCTCGACCCACTCGCAGCGCCCTCATCCCTTTCCACCCCGCGACCCCAGCGCCTGTCGGCCTG a score=12660 s mm7.chr19_random 1333713 818 + 2598976 CTGCAGCC--CAA-GCTGAGATGGAGGAAGG-----------------------------------CCAGGCT--GGCAGTGTGGTGACTCAGGCACCCCCAGGGTAGGGC-GGAACCGAACTAACCCCAGATGTGCTTCCCCTT-------------TCTGC------------------------------------------ACAAAGCCAAGGCCTCCCCCCTGAACCTCCCTCGCCCTTTAGAAACTCCCATTAACTCTTTCTTAGG-----GACCCATCCCAAAAGCCTCTTCTCAGATTTCTAACCGGTGTGCACTAGCCCTTC--------------------ATCTACAACCTGGCCACTTTTCACCCTGCACCAAACCAAACCGCAGGGTTAGAATC-----AAGCAGGATGTGCAGAGGAGTCACCCTTCCTGCAGGCTGAGAGGAGATGAAGGTGAGGGTCCCTGCCCACCTCCAGTCCAGAAGTTTG---------------ACCAA--CTGCTGC--CCCAAGCACTGGCCCACCCCCAAAGAACTCTAT--CCTTTAATGGGCCTCTATCCTAGGCTGTCCTACCCCTTAAGTAGCACATGAGGTGGCCTTTTTGCCTCAA--CCTTCTGC------------TATTAGAAAAATGAAAAGGACACCAAAAAGTAGTGAAGACTGCACAAGCCA------AGGGGGTGGGATGGGAAACAGAATTT---AGGAGTCTGACAGGTTCAGTGAGGTCCTAGCAGCAAAGATATCGACACACCCCACACCAGCATCTAGTAT--------------------GAGGTCAAACTGCACAGGAG---------------ACAAGTGTGGCTCTAACTCAAGAT-GAGCTGCCTGGGAACAGCACTGGAACAAGAGCCAACCCATCTTAGACTTACCTGGACTCCAAACTACAGCTCCCACTAACCAACAACTCTTTTACAAAAAAAAATCTAACAGCAGGTTCAAGGTTCCATA s bosTau2.chr29 32020226 982 + 45822729 CTGCAGCCAGCAGCGCGGAGGACGAGGGAGGGGGGCGCCCAGCTGGATCCTTTAGGGCGCGAGTCCCCAGCCTGCGGCGGTGAGGTGACTCAGGGCTCCCCGGGGCAGGGTGGGGACCGAACTAGCTACAGATGTATTCCCCCTTACCCCGCCCCACATCTGCCGCTAGAAACTCCTGCGGTTCATCTCTTTCGAGCCCACCCCTGCAGGGTAGAGGCCCTCCCATCTCACCCCGCCTCCCCCTGGGAGGCCAACAGCAAGCCTTCTAGAGGCCACAACCCCCTCCCTTCGGCCTCCCACCCCACCTCTGGCTTGCGGGTCCTGGCCCTCCCCCAAGCGCAGGCCTGGCCTCCCGACAACCTGGCCGTACTT--CCCGGCACCAAACCGC----CCGAGTTAGAGGCGCTGGAGGCAGGACGTGTGGATGAGTCACTCTTCCTGCAGTCTCCGAAGGAGGCTGGGAGGCGGTCCAGGC---CCCCCACGCCAGAACTCCGCTGTCCACGTGGGCTGCCAGGCCCGCCGCAGCTCGAGCTGCGGCCCACCCCGCGGAACCGCCGCGGCTTCCCCTGGGCCTCT----CAGGCTA----ACCCTTCAAAC-----------CTACCTGCCCGGCTCGATTTCTCCTGCCTGTCTCCAAGGTCCTGGGAAGATTAAGGGTACCCAGGAAGGTCGGGAAGATTACACAAGACAAGGAGCAGGAGGTGTGGAGGGAAATGGAATCCGGGAGGGGTCTGACAGGTTCTGTGAGGCCCCAGCAACCAGCCTAG-GGCACATCCTG-GCCAGCACCTAGCACTCTTAGATCCTATCCTAGAGGAGCCCAGAATATTCAGAAGCAAGACAGGTAGGTAGCAGGTTTGGATCCAACTCAAGACAGAGCTACCAGGGAGCAAAGTCTGAGCAAGAATCAACCCATCCCC-ACCCAACTGGATTCCAAATCACAACGTTC-----CCAATCATTTATTCAC----AGAACCCCAACTGCAG--TCAAGGTCTTATA a score=58809 s mm7.chr19_random 1336322 1207 + 2598976 CAGCAGACACTTTCTTCAATGGTTACAGTCTGGGAGACACAGCTTCTAAGAATTTGGTAATAATTAAGCCCTATGTCACCACC--CAGTCTGTTTCTCATCTTCCCCAGCTAGAACAG--------CATCATTGTAGGAAGCAGGGCAATAAAGACAAAACTGAGGCCAGGCCTCTACTTCTGCTCTTCTGAAAACTTCTGCCCTGCCACAAGGATGTCT--CAGGCATCGGCAAAAACTT-----------------------TGAAGAAGCCACCAATCACAAAGGAGGCAGGACAGGAAAAAGTTCAATGTTCAGTTTTCTTTAATGACCCCCATCTCCCTTGAAGGGTAGGTGCAGGCAGCTAGGCGACTGGCAAGACTTGTTCACTTGAAGATCTTGCCTTGATTGACGGCTTTGCCCACATGCTGGAAGGTCCCCTCCCAGGAAAAGTACTCTCGAACCAGGGTCTGGGTTTCCTCGCTCCCAGGATCCAGTTTCCGCCATGTATACGACTCATAGTCCACCTGCCAATCTGGACTCAGCTGAGGATTTTTAAAAAACAAAACAGTACAAAGGCATGTGGTTAGAC-ACTGGACATCGAGGCACCATTTCTGTCCAAATTCTAGCTCAGACAT--GACAGCAGATGCCAGGATTCCCACTGATTTGAGCATACTTCCTATATTTAGTCCAGAATTCTTCCTTCATACCCACTGG-----CCATGGCTCAAGACTCCTAGT----TTCCCATATTATTACCTCCCTCCCCCCAACATCTTCCTTACCGGAAAGGCAAGCTCTTGGCCTCGGAAGACCCAAACACCAGAAATGGAGCTGCTGTTGTTGGTTCCAAAGAGGATAACACTAGCAAAGGCATTCTTCCTCAGTTTGTCCAATCGCTGAAACATCCCTGGAGGGGGGGAAAGGGAGACTTATCTAGTCTCTGGAATCATGTCACCCACTACCTTGGCTCCTCTTCCTCCC---AGACCCACTCCTCTTCTCACCAGTGATGAGGTTGCAACTCATGAAGGTCTGGGTCAGCTCTTCAGGGAAGCGGTACTCGGCATACCACAGGGACCAGCCATCTTTATCAAAGTGCTCCCAAAAATATGGCAGTGCCACAGAGAGGGTGTCCTCATTGGAGTACTTACGCTTAAACTCATCCAACACAAAGGTACTAAAGAGAGAAGAAAACATAGGAGCTCCATAAGGAGCAAGCCCTACCGAGACTGCAGAGCATCTCTAGGC s bosTau2.chr29 32021904 1202 + 45822729 CAGCAGGTACTCTCCCC---TGTCACAG---GGGAGGGTCTG-------GAATTAGGTAGTTACAAAGCCCCGTGTCACCACCTCCTAACTACATCCAATCTTTCCCAGCTAGGCTAGAAGATGGTCATCATGG-AAGAAGCAACGCAGTAGAACAAAAACTGAGGAGCGGCCTCT----CTGCTCTTCTGAAGACTTCTCTCCTGC-GCAGGGAGGTCCTGCAGGCACAGACAGAACCCTGCTCCAACACATCTACTCCCCTCTGAAGAAGCCATCACCCACAAAGGAGGCAGCACAGGGAAGGGTTCAATGTTCAGTTTCCTTTAATGACCCCCATTCTCCCCGAAGGGCAGGTGCAGGCAGCTGGGCGA-TGGCAAGAGGTATTCACTTGAAGATCTTGCCCTGATTGAAGGCTTTGCCCACATGCTGGAAGGCCCCTTCCCAGCAGAAGTATTCTCGAACCAACGTCTGGGTCTCCTCGCTGCCGGGATCCAGTTTCCGCCATGTGTATGACTCGTAGTCCACCTGCCAATCTGGACTCAGCTGGGGA--------GAAAAAGTCAGGTAAGAAGCATGTGGTCAGGTTATCAGACACTG---TCCCATACCTGTT--ACTTCCAGCTCAGACACCCATCATCAGAGCCCGGGACGCC------TGTGAACATGACTGCTCTTTCATGGACACA----TTCCTTGAACTCTCCAGGGCGCCCTCTGACTCAGGAATATGAGTGCATTTCCCAAATCCTTGCCCCAC-CTTCCCTGCACCTTCCTCACCGGAAAAGCAAGCTCCTGGCCTCGAAAGACCCAGACCCCAGAAATGGAGCTGCTATTGTTGGTTCCAAAGAGAATGACACTGGCAAAGGCATTCTTCCTCAGTTTGTCCAATCGCTGGAACATTCCTAAAGGGGAATAAGAA------CATTCAGCCTTTGAAATCACATCGCCCACTACCGTGGCCTCCCTTCCTCCCCCCAGAGCCA----TCTTCTCACCAGTGATGAGGTTGCAACTCATGAAGGTCTGGGTGAGCTCTTCAGGGAAGCGATACTCAGAGTACCACAGGGACCAGCCATCCTTATCAAAGTGATCCCAAAAGTACGGCAGCGCCACGGAGAGCGTATCCTCGTTGGAGTACTTGCGCTTAAATTCATCCAACACAAAGGTACTGCACGGAGGGAATAAAGCAAGAAGTCAAGGTGGGGAAGGTCCTACTGAGGCAACAGA-TGTCGCCAGGC a score=3831 s mm7.chr19_random 1337970 139 + 2598976 CAAGGAGGACACAGGTGGCTGCTGCCCCCAGGTGGTGGCTAAGAGCAAGGTAGTCTGTTTTTCTCTCTCTAGCCTCTCCTGGA--------CAATG-----------------------CTCAAGT------CTGAGCCTCCCTCCCCGCCATACAGGCCTTCTCAGGTTACAGGC s bosTau2.chr29 32023289 175 + 45822729 CAAGAAAGATGTGGG-AGTTGCTGCCCCCTGGTGGAGGCTCACAGCGAGAACTCCTCTTTTTTCCTGTCTGGCCCCTCCCAGGGCTCCTCTCCATGAGTCACACTTGGTTCCTGACTCACCCAAGTCGCTGCCCACACCCCCACCCCCATCACACAGGCCTCTTCGGGTTACACAC a score=4522 s mm7.chr19_random 1338120 220 + 2598976 TTCGGAGAACAGCCACCTCAAATCTTTATTTACACCCAGGTCCTCTAGTTCTTCTTTGTCCACTAACAAGTTTACATACTGAAAAGCTCTTAGGTCCAGGTTATCTTCAAAGTAACCTGACACTCCAGGTCAGCTGCCAAGAAAGCTAGCCAGCATGGGCACAGGAGGTATTACTTTCCCATG----GCTCGGGTCCTATTTTTTTCTTTCCTTCAATTATAAA s bosTau2.chr29 32023499 201 + 45822729 TTCAAAGGGCCGCCATGCCAAATC-----CTACAACCGCGTCCTTTAGTTA--CTCTGCCCAGAAACAAGTTCAGGTGCTAAAAACCCC------CCAGGTGGTCTCTGAAGCAATCTAGCAAG--GGGACAGACACCAAGGA----TGCCAGGGTCAGAACAGGAGGTGTCTC-CCACCATGGTGAGCAGGGCTTCCGTTCTGTCCTTTC---CAATCATAAA a score=16936 s mm7.chr19_random 1341610 330 + 2598976 TCAGTATTGTA---ACAACCTAACATCGTA-GCCCTAGATGTGAGAAGAGCACCAGCTTACCTCTTGGGCAGGTGAGCGAAAGGGTCCTTGGCCTTGGGCTCAGCAGCCAATGCCTGCTCACACTCATCCATCTCTTCCTCAGGAGCTGGGGCAGCTGCCTTTTTTTCCTC---------CTTCCGCTCAGCCTGGGGTTTCTGTTTCTCCTCTCGTGAACCCTTTTCTTTCCTTGGGGTATCTTTTTTAGGCTGGCTCTCTGCAAACTTCTTAGCTAGC----AAAGGATGGAAGAAAGTAAACATACAGCCTCTTTCTTT-TTTCTCCCAAACCCGGCAGCAGGCA s bosTau2.chr29 32025499 335 + 45822729 TCAATTTTGTATGGACAACCTAAAATCCCAAGCCCTCCA------------ACATCCATACCTCTTGGGCAGATGGGCAAAGGGATCCTTGGCCTTCGGCTCGGCAGCCAGCGCCTGCTCACATTCATCCAGCTCCTCCTCAGGAGCGGGGGCAGCCGCCTTCTTCTCCTCTTTGCCCTCCTTCCGCTCTGCCTGGGGCTTCAGCTTCTCTTCTCGAGAACCTTTCTCCTTCCGTGGGGTGTCCTTTTTAGGCTGGCTCTCTGCAAACTTTTTAGCTGGTGCAAAAGAGAGGGAGAAAAGTCAGTGTCTGGCCTCTTTCCACATCCCTCCCAAACCAGGTA-CAAGCA a score=13486 s mm7.chr19_random 1342071 293 + 2598976 AAGTCAAAGGGTTGACA-GGCGCCAACTGG-ACCCTGACCCTATC-ACATGCCCAGTCTCTTCAGACTTACCATCAAACTGAGCCATCTTCTCACACAGCTTCACCTCCCCCAAGATAGCCCTGAACTGGGGCTGGTTAATGCAGGTAAGGAACCACCGGTTGGTATTGGGGAAGGCCTGGCGAAAAGAAGGCTCTAAGACCTGCCAAGAGGGAATGGCAGAAACAAGATCAAT-AATGGAAAGGCCATGAACAGATTTCAAACCACAGCAAAAGCCCCTTACCTCCAGGTCCACTG s bosTau2.chr29 32026097 295 + 45822729 AAATCAAGGGGTTAAGACTGAGCAAACCAGTCCCCTGATCCTGCCCGTATGTCCCCGGACCTCAGACTTACCATCAAACTGGGCCATTTTCTCACAGAGTTTCACCTCTCCCAAGACAGCCCGGAACTGGGGCTGGTTAATGCAGGTGAGGAACCAGCGGTTGGTATTAGGGAAGGCCTGGCGGAAAGAAGGCTCCAGAACCTGTCAGGATGCGAGAATGGACATGAAGTCAGTGGAAGGAAACATCCTGA--TGTGTCTGAGCCAGAGCCAGAGCCCCATGCTTCTGTCTACACTG a score=36102 s mm7.chr19_random 1344776 1301 + 2598976 TATAAACCTTACCTGTTTATAGAGCCACAACAGGGTACAGACAACTGTAATATCAGCCAGTGTCACTCGCTCGCCCACTAGAAAAGTTCGAGTCTTCAAGTGAGTGTCCAGCAGCCCCAGGATTCGCTTCACCTCCTCTTTCGCATTTTCAGTGGCCTGTTGTTTTGAA-TACTCAAGCTTAG---TGGGTACCAAGTCCCTTTCCT--CAGATCCCCCCACCAACAGAACTAAAGAAGCCATTTAACCAGCCATCGACTCAACCCCCACCCTCTATCATTAGACTCTAGAATCAGTTGAAACTTATCAGAAATGAAATCACTCGTGTTAGATATCTTCATGAT-CAACATGACTTTATT-TGCACCATACTGAT------------------------GGTAGCCACTTTAG-------------------------------------------------------------TCTGCATTGCCCCCACACTCCTGCTATCTT-------------------------------------------------------------------------TTCCTTCATCTGTCTCCCAG--TCCCAAAATGTAGGCTCTGACTCTATCTCTGGCCCAGCTTCTCCCCAAGTTCCAAAGCGTACCTGTTTGTTGTGGTGCATAATGCCCAAGGTGGGGAACACCCAGGTACTAGCTGGAGGAACGATGTCACTGTCAGCAAAGCTGACCCACTGCACCACCTGAGCTGCCGCCTCTGGCGTACTTCCTCGCAGCTCCTCATTGCTTACTGCAAAGGCAG-ACATAGAGCTTAGAACTTTGACCTCATGCCAAAACCAAGCCGGGTCTCTG---ATTCCACCTT--GTCCGCCACAGC-------CGCTTCTACA-GCCTTACC---CCCATACCCTCTCACGCCTGTATCC-CCACAAATTACCATAATAGGCAATGGCATTGCTCTCAAACACACAGAATCCATCATCACCCTCAAATGCTGGAACCTGTGGAGAAAGTAGCAGAAAACATAA-ACACAGAGATTTCTCAGTAGCCAATTCTCCAGGCTG-AATTGTTCTAAATAATATGTT------AAGACAGACAACTCTTGCTACGCTAATTCATGA-CATCTCAAGCTCAGAAGTGAAAATTAC---------TTAGTATCCCTCATGATATGAATTCACAAGGGTGA-------AATTCAAACATAGCTAAAGTGTGGTGCCCCATACCCTTGTCTGA-AACCAGCCAGCAAGCTACTGAGACCCCACCTCAAAATAAACAAATTCAGATATGGATGCCACCCAA--CAATCCCACAGCTTCACTGCCCAAATCATTAGGTGCCATCCAGACTTAGCATTTGCCTCTATATTTAGATTTGGATATTTAGCT--CTACTCATGCTCTATGGGGTAAGAATCCAACTCTCAAGACATACTTAGT------ACATACATACAGATAACACCTGGTGAAAATACATTTTATCC s bosTau2.chr29 32028800 1427 + 45822729 TATAAATTTCACCTGTTTGTAAAGCCACAACAGGGTGCAGACAACTGTGATGTCAGCCAGCGTCACGCGTTCGCCCACCAGAAAAGTTCTCGTCTTCAAGTGAGCATCCAGCAGCCCCAGAATTCGCCTCACCTCCTCCTTTGCATTCTCTGTGGCCTATTGATTTAAAATGATCAGACTCAGCAGTGGGTAGCAAGCCCTGTCCCTGCCCTTCTCCCCCAATAACAGAACCAAAATAGCTATTCCACT---------------------------------GAGTCCTGGCTCGCTGCACATGTATCACAAATGAAGCTCTCAATGTTAAATTTCTTCAGGGTGCAGTCTGGCTTCATTGCAAACTGTACTAATCATAGTCATACGTCTTTGAATTttagaagtcaccttagaggtcatctggtctaactatactcccttaccatctgaaacaatctttttacagcaGAAATCTCTGGTCTGTCCACTCAGACCTCCCACCTCCACTGGGTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGCATCGCCCTTCCTATTCCTTCCTCCCAGATGCTCAGGAAG------CTGATGCCACCCCAGCCCGTGGTCTCCCCCAAGCTCCAAGGCTCACCTGCTTGTTGTGGTGCATGATGCCTAAGGTAGGGAACACCCAGGTGCTGGCCGGTGGCACTATGTCGCTATCAGCAAAGCTCACCCACTGCACCACCTGTGCTGCTGCCTCGGGAGTACTTCCCCGCAACTCCTCGTTGCTCACTGCAGAGGCAGGACATGAAGGTCAGAACTCTGGGGTTATGCCAAGACCAGTCCAGGTGCCTGGAAATTCCTCTTTTTGTCCACTCCAGCTCCCCCACCCTCCCCCACGCCTCACCACCTCCAGATCCTCCCACTCCCACAGCCACTGCAGATTACCATAGTAGGCAATGGCATTGCTCTCGAACACACAGAATCCATCGTCACCCTCAAAGGCTGGAACCTGGTGACAAAATAGTCAAAAGTAAAATACACAGCAGTTTCTCACTAGTCAAGTC--CAGGAGGCAACTGTTTTGAATAGAAGTTTTTATATAAGGCTAATATCCCTTGCTAACCGAACTCTTTAGTATCTAAAACTCAAGAACCAAAACTACATGACTAACTTGCTACCCCCTACAATGTGAACTCACATAAGAAACCCCCCAAATTTAGATATTATTAGATATTTGTACATAATTCCTCAATCAGATAAGCAAAAGGCAAGAAACCAAGTCCTCTACT-----------------GCTGTCTATATTATCCAGAGCATTACCACG----TACTACTC----CACTGGA------CTTGACTTAGCAT--------------------GGTTATTTATCTACCTCCGTAAGCCTCTTGGGGCAAGAATTTCACTCACAGCAGATATCTGACCTATTGACATTTGCACTGAAATCA----GTCAAAATCCATTCAGTCT a score=63367 s mm7.chr19_random 1346343 1446 + 2598976 ATGGGGGCCATCTCCAGAATAATGGAATT---------CTAGAGATCCCAGA-----------------TGCTTCCCCACTCACCTTGCCGGCAGGAAATTTTCGGAGAAATTCAGGGGTGCGGTTGGTTTGGCCAAAGTGGAAGTGGGGTGGTGCGGAGAGCACGCGGACCTGAGCCCCGCTGTACTGAGCAGCGATGAGGGCCTTGAAGGCCCTCCAATTTTCAGGGTATGTGTACAGGGTCTACAAG--AGAAAGGGTGAAGGATGGACTAGAGGCAAGGAA--------CCCTGAATGCCACTCCCCACGCAC--ACTTCCATG--CAATTCCAATGTGCACAGCTTAGATTCACTCC---TAGTGAACCGAGT-----------------ATGCCCCATGTAATCAGAGTCCTCTGAAATACCAAGAAGA-----ACATCCCAGCTGCTAAATAAAGCTTACCGACAGATGTGACCTCTCTTAAGGACATCTCTAGAGGCATTCT--TCCCTTCAAA---------------------ACTTCT----------GGTCCCATCTGCCTAAACACACGAACACTCACACCCATCTCTCCCAGAACCCTTGTT---TCATTCATTGGCGGTGACCCGGAGTCTAACTACTT-----CCAGGCTGCTATCACTTCAAAAG--------------------CACACACACAGACCAAGGGATTTCAAAGTTCCCCTCAGAATCGACACG----CTGAATTCTAATGTTCATCAGTTATTCTTCCTGAAATGCCTTTCTTTGCACATGGCGAATTAGCAACCCTCTGGTCCTGTCCTGCAGTGAGTTCCC--AGTTGTCTCC----CTACTAA-AATCTCACCAGCAGGGTCCATATGGGCTCACTTCACCCCCCCTTTATTCCTCTGGCTCCCAAACCTCCCCGAAGGTCAACTCCCAAC-GTG-CCAGTCGCCCCTTCCCACAAAGACCCTCTCCTTT-CCACGTCCTCGTTGTTGTCCCACAAAACGGTGGCAAAAGTTCCACCAACCTGCTCAGACGCCACACCTCAAAATGGCAGTGAGGTTAAAC-ACTTTTTAAAGGTCCAGACAATGGAGACCCAGCATCTTTTTTCTCCTCAACCCCAGAACGTTCCACCTCT--AGCCTCT--GAGCCCCAGCCTCAGTTCCCCTCCAGGCCCTAGAAACCATGCTCTCCGACCGTACGGCTTGTGAACCCCAGATCGGCTCGCGGCTTGGGTCTGAAACTCCCCTGGCGCCGACTGGCCCCACTCAGGCAAAGGATGGCGGTGGATAGGGTGACCCTAATCACCGGAGCCGGCAAACTTACCCCAGCCGCCATGGTGATTCCGCAGAGAAAGGGGGTGGGGCTGTCGGTGCTGCCGCAAAGTAAGCCGCAAAGGAGACAAGGGAGGAGGAAAGGAGAGAGCAGTGTGGAAACAGCGGCCGGAAAGCGAGGACGGCATAAAAGGCATACGCACGACAGTTCCGTCTACAGCC-CCGCTGAGTTGGAAAAAGCGAGGGGTGGGGCCCGCAGCCTGGAGCGCAGAGAGCGGGCGCCTGCGTAGT s bosTau2.chr29 32030378 1573 + 45822729 ATGGAAGCCATTTTCAGAGTGATGGTTTCTCCGTTTTCCTTGGGTTCTCAGGACCAAAGGCCCCTCTTCCACTTCCCTACTCACCTTGCCAGCAGGAAATTTACGGAGAAATTCGGGGGTGCGGTTGGTTTGGCCAAAATGGAAGTGGGGTGGTGCGGAGAGCACGCGGACCTGAGCCCCGCTGTACTGAGCGGCAATGAGGGCCTTGAAGGCCCTCCAGTTTTCAGGATATGTGTACAGGGTCTGTGGGGAAAAAATGGGGAATAACACATTAATGACTAGAAGGGTCCCAGTCCTAAATG----TTTCCAGGGAATGACTTCCCTGAGTAACCCCGAT-----CCGTTTCACCTCACTCCCTCTGGTGAACCAAGTTAGTTCTTCCGTGGCTGCTGTCAAGTGTAACCAGAGTCCCCTGAAATACCGAGGACAGAACTACACACCGACTGCTAAATAAAGCTTGTTGACAGATTTGACCTTCTCTAAGGACGTCTCTAGAAGCATTCTCTTCCCCTCAAATATATTTCCAAGAAATACAGAACTTCTAAGTCCCTCAGACTCCATCTGCCGA------CAAATACACA-GCCCTCCCTTCCCAGAGCCCTTGTTCATTCATTCATTCATGGTTCCCGAGTGCCTCACTACTCTACTGCTGAGCCGCTCACCCTTCAGAAGTATTACCCTTGTTTCCAAGACACACACATCGACCAAGACATTTCGGAGC-CCCCTCCAAATAGCCACGGGAACCGAATGGCATCTTAAATCAACTCGGTCTCCCTAAAACCCTTTCATTTCTTGTCACGCATTC-CATCTCTTCGGTCCTGTCCCGCAGTGAGTTCTCCGGGTTGCCTTCTCCTCTTCTATTAACCTGGCCAGAGAGGTCCAATTGGCCTGACTTCCCTGTCCGGAGACTCTTCTCGCTCCCAAACCTCCCCGCCGGACCACCCTTAACCGTGGCCAGCCGTACCTGCCCATAAAGACCCTCCTCTTCGCCCTGTCCCTCCTGTTGCCCCACAAAACGGTCGCAAAAGTTTTGCCAACCTGCCCGGATCCCACGTCTCGAGGCGGCAATGAACCCGAACTGCTTTATCAAGCTCCAGACTGCCAGAATCTGGCATCCGTTTTCTCCTTTACCCCAGACCCTTTCACCTCTTCGGCCTCCCAGAGCCCTAGCCTCAGTTCCCCTCTGGGGCCTGGAGGCCCTACTCTCGAACAGTACGATCTCTAAACCCCGGATCAGTTCCCGACTCAGCTGCAGAACCCCTCTGACGCCGGCTGAGCCCGCTCGGGCAGAGGATGGAGTCGGATAGGATGAGCTGGATCGCCGGAGCCGGCAAACTTACCCCAGCCGCCATGGTGATTCCGCAGAGAAAGGGGGTGGGGCCCTCCGCGCTGCCGCAAAGTAAGCCGTCAGGGAGAGAAGGGAGGAGGGAAGGGGAGAGCCGTGGAGAAACAGCAGCCGGAAAGCGAGGACGGCATAGAAGGCTTACGCACGACAGTTCGGTATCCCGCAGCAGCTGAA-CGGAAAAAGAAGTGGGTGGGGCCTGCTGGCCAGCGCGGAAAAAACTCGCGCCGGCGCAGT a score=42788 s mm7.chr19_random 1347907 1538 + 2598976 AGGCTGGTATCTGGAACCCGTGACAAACTACAGG-----AACTGCCTTAAG--GAAGGGGTGGCAATTTACTGAATTCCTTTTGTTCCTGTTCGGGTTTTTTCTGTAAAGGGTCTGTCTGTTCAGCTGGGGCCCACGGCCGAAAACATCTG--AAAGTAGGTCTGCTCCGATTAAACTCC--------------GTGCTGTTAAAACTTACACAACAAAGCAGCACGGACCAACTTGCCACGTCACCAGCACCACTCAGGCTTGGCTGCGCCCCAGAGGGTCGGGTAAGG-------CAGCCCAGTTCTGATAC-----AATAGTTTACACATATCCAAATTTGAAAATAAATCTTGACTCCAGCTTATGGGCA-ATTTGAACTCTCTTTCACGTTAAAGGATAGAAAAGAC---AAACCCTAAACCCAAATTTGTGGTTCCCATCACC---------TGGAGCAGCAGGACAAGTCTCGTGTGGGCAAAGGTTGTTCTCAG----AAATCAGTGCCTTTGCCTCGTGGAGGTGGCACTCC------CTAGGA--AAGTGCTGG-------CAAGTG---------------------GGAAGGAGAGCTCTGAAGTGGAAGTCATAGGACTGTTTTAGAGTAGTCAGGC---------CAGAAGCTACATTGAG------GCAAAGAAAAAA-GGCGTTACCAGGAGGAAAACAAAGACCTCGTAATGGTCTTATGAGGGAGTATGCAAAAGAACATTAAATGTCTGTATGAAATAAACTAGCAGCTTTATTGTTTTTGAGGTTTGGT-TCCTCACTTGAGGAGATTTTTAAGTGCTTGAGGGATAAAACCCTGTAGAAAATGATGAAGACCAGGGAACAGGCCTTGGGAGTCCTGGAGTGGGGCCACAGTGAGTGTCTGCTCAGCCTGGGAGGCAGATGCCACAAAGCTGAGGAGGGGCTCCCCCGGCGGCCTCTCTTGCTCACTATTGGGTCCTTTTAGTTCCTGGGTCACACGAGCTTCCATTGCCAGCCACTCTGCTCCTGTGGTGGGACCTCCTCTACCTTCTTCCTTGGTTTGTTGCTGTAATCGTCTCCGGGCACGCCGCCTCCCCTGCCATACTTGGTGCCACAAGGCACAGCGCCAGCTCACTGATGATGGGTGTGATGCCTCCTTCCCTGTCTCACCCTGAGACCCTTCTCCAGCCACTTCAGGTTTCATGGGATTATGCTCAGC-----------TGCCT-------------------TGTCTAGACAGTTTGCAGTCATCAGGGGCAACTCCTCCTCTGGTGGTCCCGAGTGCAACAAGGCCCAGTCCTGAGGTGTCTCTCGAACCTCTATTACCATTTCTTCTACCTCATTTTCACTGTGGTCCCCTGCACATCCCTGTGGCTCCTCTTTCCCTTCCTCGAAGCTCTTTTCTTGCCCACCAAGTCTCTGTCTTTTGTTCACCCCTCCCAAGGGAGAGTCTTTAATTCTGGCACCTTCTGACCGTCGTCTCTTGGTTCCCTGTTCTATGTGGCATCCTAGTGCTTCCCTTAACACATCCACCAAAGCCATAATGACCTGTGGAAAGGGGGCAGAGGGTAAGGGGATGAGCTTGGCAGACAGCAGGGAGCTAGGGGAGCTGGGCTGCAAAAGCGGGAGCA s bosTau2.chr29 32032129 1540 + 45822729 AGACCCACATCTTGGTCGTGTGACGATCATTGGGGTGGCAACTGCGTGGAGATGAAGGAGTCCCA--------CGCTCCTTTTGTTCCAG-------CTTTCTAGAGGAGAGATTGTACATCTAACCCAAGCCCAGGTCTGAAACCCTCCGTAAAAGTGAGGCTTTTTTCATTAAACCACTTTGCAGCTCAGAGATGCTGTTAATA-------AGAGAAGAGGCACT------CTT---------CCGGGACC---------------CGCAACAGAGGAGGGACTGAGGAAGAACACAGCCAAGTCCTGTCACCCTGGAGGGGCTGACA---GTTCAAATGAGGGG-------TTGTCCTTTACCTGTGCTCAGATCTGAACATTTTTTACCCAATATGAAGAGAATGGACTTATAACCCTGAACCCAAATTTCAAG-CCCCATCACCATTCATAATCTGGGTAGTAATGTAAA--TGAGGAAGGAAACGGTTCTTCCCAGGTGCAGCTCAA-GCCACCACC---------CAGCACTCCATCTTTCCAGAACTCAGTACTGAGGGGGTCCAGGTGCCAATCACTTGCCCTGGGCATGAAAGGAAACAGCC----TGGGAG--ACAGATCTGTTTTAGGGTGACAAGACAAGGTACCTCTGAGGCTGCACTAAGCACTTAGTGGGGAAGGAGTATCATCACCAGGTGGAAA------------------------------------TAGAGGAAACTA-------GTGTTCATTAAACTAGCAGCTTTATTGCCTTTCAGGGTTCCCATCTTCACTTAAGCAGGTTTCGAAGTGCTTGAGGGAGGAAAACCTGTAAGAAATGATGGAGATCAGGGAACAGGCCTTGAGAATCCTGGAGTGGGGTCACAGTGAGACTCTGGTCAGCCTGGGAGGTGGATGCCACGAAGGTCAGGAGTGGCTCAGCCTCTGGCCTCTGTTCAGTACTGCTCAGTCCCCGCAGCTCCCGGGTGACCTGAGCCTCAGTTGCCAGCCACTCTGCTCCCGAGCCAGCACCAGATCCACCTCCTTCCTTGATTTGTTGCTGCAGGCGTCTCCGGGCACGCCTCCGCCCCTGCCACACACGGTGCCACAAGGCGCAGCGCCAGCTCACTG-TGA-----GCGACACCCGCTTCTCGGCCTCGGCCTGAGACCCTTCGCAGGCTGCCTCAGGTCCTCTGGGCCCCTGCTTGGCCAGCGCTGCGGTGCCTGACTGCCCCTCTTCTCTGGTGGCTAGATGCTTTCCGGTCATCAGGGGCAGCTCCCCC---AGCTGCCCAGGGCTCCGCATCACCCAGTCCTGCACCGACTCTCCAACCTCTATGACCATCTCTTCCACGCCATCTTCACCATGCTCCCCTGCACATCCCTGCTGCTCCTCTGGCCCCTCCTCACAGCTTTTTTTCTGTCCATCTAGTTTTGCTCTCTTGCTTGTCCCTCCCTGGGGGGGCTCCCCAGGGCCACCTCCCTCTGACCGCAGTCTCTTGGTTCCCTGTTCTATATGGCACCCTAAGGCTTCCCTTAACACCTGGGCCAGCACAGCAGTGAGCTGGGTGAAGGAAGCAGGGGGTAAGGGGATAGGTGTTGCAGAGAGGATGGAGCTGGGGGAGCTGGGCTGCAGAAGGGGAAGCA a score=25706 s mm7.chr19_random 1349575 1216 + 2598976 CAGGTCAAAGGGGTCCTGGAGATTCATGGGGCCAAGGCGCAGCCCTTCCCAGAGATCAGAAGGCAGGCCCTCTGCCACCATCAATGGCCGA----------CCTTCCCGCAGGGACAGCAGGGAGCCAGAAAGATCCAAGCAAGATACGCAGGAGAAGAACTGGGCCAG----CAGGGAACCTGATGGAGGCAGATTAGAAAAAAGGGGGTCACCTGGAAGCCATAACTGGGACATCCCTGCAGCTACTTCAGTGGGACTCTCTTCCCTTCATAGGACTTCAGAAGTGTCCTGAGAAACCCAGCCATGCCCTGCCTGACCCAGATGCTTCTGCTTGGCCTAGAGAGCAGGGAAAC--TGGGGAATACACCTC-TTACTTGCCTGCCCAAGATACGTGTTTTTCCATCCATAAAACAGCTGCCATAGGCTACTATGAAGACCATGCCTTACACACAAGTATAATATATGTCTCTTATTCTTGAGCATGCCTTGCACACAAGTATATGTCCCCTATTCTTGAGCCTGTCATCACAATCAGTTTTCTACCAGGTTCCCCAGACTCACTGAGAGGCTCCACGTTGGTGCTGGGCTCCAATCTTGAGGCATCCTTAGGGAAGCTACAGTCCCAGCCATCAACTTCTACCTGTTCCCCTTCACCTGTGACAGTAAGAAGA--GACAGTCAGCCCAGAGCCAGTCAGCCCAGAGTCTGCCATTGATGGTGGCAGAGGGCCTGCCTTCTGATCTCTGGGAAGGGCAGAGCCAGAGATCTCATCTC---GGGGCTTCTGAAGT-----GTGAAGGGGTGAGATGAAGCTGAGGTCAT---GACAGTAGAGGCCGTTCTGCAGTACCTGCTCTCTGGGTAAGCTGGGCCACAGTAGGAAGTACTGGAGGGTCTCTGGTCTGAAGGAAGTAGATCACTAACAACGTCAAGGCGTAGTTATTGAGAAGGGGGCCACCTCCTGGATAATAACCAATAATTCAAGTTAGG-AAGAAGTATTTACAAGCCC--------TGGTTTCTGTGCCCACCTCTTTTTTTCTTGCTAAATCCCTGCCTTTGCCT-GACACAAACTTGGG-CCAAGTCTGTTC----TCATTCTTACCTGACAGCCCATTATGCTGAGCCCAGCAGCGTAAGGTATACACAAGGGGCCGGACTCGACCATCCATCTCAGAGCAGAGATTCAGGAAACGTGAATTATATAAGGCCAACCTAGGACAATGGAGAAGCAA------AGGTGTTAGAAATTT s bosTau2.chr29 32033755 1022 + 45822729 CAGGGAAAAGGGGTCCCTTAGA-------GGCCAGAACT------------GAGATCA--------GCCTTGCGCCACAGCCATTCCCTGAGCTGGACTTGCCTTTTCCC------------------------TCC---CAAGTGGCTCAGAGGAGTGCCAGAGCCAGGCTCCTCTGATCCTAAT--------------AAACAAGAGGTCA------------AAC------------------------------CTCTCTCCCC----------------------------------ACAGTGCCC-------CCcagatactcccccttccccctgctagcagtataaccttgggcaagccatttcattact-------ccaaggcaca-gtttcttcatctgtcaagc----------ggcaataatgataacta------acccacaaggctgctgtgtgccaataact-------gtgtcattaACACCA----------------CTTG---------------TTAGTCCTCTCCCAGGCTCCCCAGACTCACTCAGAGGCTCCTTATTGGTGCTGGGCTCCAGTCTTGAGGCATCTCTGGGGAAACTACAGTCCCAGCCATCAACCTCCACCTG------TTCGCCTATGAAAGTAAAAAAGTTGAAGCTCAGCCTGTAAGCAGGAAG-------------ATGGGTGGGGGCTTGGGGGGTG------GA--TATGGTAGTGACAG---CAGAGATCTCATTCCCAGGAAGCTCCGTATGTCTAAGATGAAGAAGAGAGATGAAGGTCAGGAGATAGGGCGGGTGAAGGCCGGGCTGCTATACCTGCTTTCTGGGTGAGCTGGGACACAGTGGGCAACACAGGAGGGTCCCTGGTCTGAAGAAAATAGATCACGAGCAAGGTCAGGGCGTAGTTATTGAGAAGTGGGCCACTCCCTGCATA--AATAATTAATTCTGGTTAGATCAGAGGCAGTTCTGACCCCCTCCTTGGCAGTTTTCTCAACCCCGCTTCCTTCCCTCCCCGAATCCCTGCCTCTGCCCAGACACCAACGCAGGCCCCGGTCTGTCCTGATTCATTCTCACCTGACAGCCCTCGACCCTGAGCCCAGCAGCGCAGAGTGTACACAAGGGGCCGTACTCGCCCATCCAGCTCAGAGCAGAGACTCAGGAAGCGGGAGTTGTGCAGGGCCAGCCTAAGACAGAGGGCACACAGGGTGTCAGGGCTCAGGAGCTT a score=28958 s mm7.chr19_random 1351111 1334 + 2598976 TGCCTCAGAGACAcaggaccagtgagatggctcagtgggtaagagtctgccaccaagactgacgccctcagtttaatccctaggaattatgttaca-aggaagagaactgattcccacacgtcattctctgacTACACTCAAGATGAGATGCGGACA---CAAATATAAGAAGCATAGTAGCAAGAATAGTTTATTCAATGC-----AAAGTGATAATACAGA----------------TCTGAAAGAAATATGCGGGCCACATGAATGAGAGTATTCGGAGGCCCAGTTATAATCTGTGGCCTCCTTTTATGGGGTTCAAGAGAAGGC-----ATTTGGTTG--CAAAGCTCTTAATATACAAAGAAACAAAGCATGGAGTAGGGAAGGAAAAATAGTGAAGGAAAACCCTGTTTACTTTTAACCTAACAGTTCCTAGGTTTCTGTAGCTACAGAACTCTTTCCTacgcttttaaccccaaaggaggaggcaaaggcctatgagctcaaggttagcctgtctcaacacaggctgtctcaaaaaaacaaaaCCAACAACAAAAAGCAGTACTGCAGagtcaagcatagcagcacatgcctgtaaccccaggagttaggaagctaaggcaggagaatcacaggcttgaggccagtctggacaatggagcaagactctgactcaaacgcacaaaGTATTCCAAAGGAAAAA-----AAAACACTGAAATGGAAGCCAGGTAGGAGGTGACATTCGTGGAAGAAAGGAGGACTGAACCAAAGAAGAAAAAC----AAATTCAGCAGGCATAAGCTCGTCCACATCAGGACCCCCTCCTCATATACCCCAG---ACCTTAGAGCCAGCCTTCAACCCCACA----CAAAAGTACCGGTTACTGAGGGATACATCTCCATGAAGACCTGAAGGCCGATGACAGAACTTGACCACAGGACGCCGGGCAGAGGGCACAGTTTGGACTCGGTACACTCCAGGGACACAGCCACGGAGAATAGATCCCACCAGCTCTAACACTGCTGCTGCCTCCTCCTTCTCGTCCTTTGAGGCTTCTTCTGCTAATTCTAGCTCTTTCCCCTGTTTCCCCTCTTTCCTGTCCTCCTGCAGTGGTGAAACTGGAGGCAGAGACTGAGGAGAGGTGACAGTGTCAGAGCCCAAAGCAGAGTCGGGTGTCTGTGGTGCCAG---AGAAGATGGGGTGTCAAAGTCCAGGGACTCAGACTCTTGAACAGAAGTTGGAGACAGTGAGTCTAGAGGAGAAGCTGGGGTGCAGGCCAGCGCCTGAGGATCCAGGGAAGAAGCAAGGGCTGAGTCCAAGGATGAAGTCTCTGGAACCTTTGGAGCCTTTGGGTCTGGCTGT-AATGGAGAT s bosTau2.chr29 32034990 1097 + 45822729 tgcctcggagcaacgaagcccctg-----------------------tgtcacagctactgaagccctc------gtgcctagagcctgtgctccacaacaagagaac-----cccaca-----------aaccacaacaaagagtagctccgctcaccccaacttgagaaagccc--ttgcaagcaatgaagacccagtgcagccgaaaataattaaaaaaaaaaaGTGAATGTTGCTTCTTAAAGAAAAAAACA---CACAtca---aatgtgtttgggaaac--actacatcctataaatgtcttgga--gagtcacagagcatgttaTTAATAAGATTGATCAGAACATTTACTATGCAAAGAAACAAAG---GGAGTGAGAAGGAGGAAAGAGCAAG-----------------------------------------------------------------------------TAGGAGAGGAGGGAAGGG----------AGAAACTGGCCTGTGTTAACTTAGCATTTCCCAAACTTATTCAACCAAC----------------------TCAATT-TAGGAACTCTTTC-----------------------CTAAGTCCTTAAAATC------------------------------------------------------AGTATTCCAAGAAACATACTTTCCAAACATTGAAATGAAAGCCAGACATGAGATAA-----GTGTCAGAGA----GACAGGACTAAGTAAGGACAACCTCAAGGCTCAGCTGGTG---------------CAGGGCACCCCCCTCCCCCTCCCCAGAGTACC----AGCTGGCCTTC--CCCCACCACCTCAAAGGTACCGGTTACTGAGGGAGATGTCACCATGGAGACCTGAAGGCCGATGGCAGAACTTGACCACAGGGCACCGGGCAGAGGGCACGGTTTGGACTCGGTACACTCCAGGAACACAGCCCCGAAGGATGGATCCCACCAGCTCCAGCATGGCTCCCCCTTCTGCTTTCTCCCCCTTCAGGG---CCTCTGCCAGTTCCACCGCCTTCCCCTGGTCCCCGTCTCCCTGGTCCTCCTGCAGCGGCGAGGCTGGAGGCAGGGACTGGGGAGAGGCGAGGGTCTCAGAGGCCAAAGCAGAGTCTGGAGTCCGAGGTGCCAGTGAGGAGGAAGGGGCTTCAAAGTCCAGGGCTTCCGAGTCTTGAGGAGAAGCTGGAGGCTGTGAGTCTGGAGGGGAGGCTGGGGTGCAGGCCAGGGCTTGAGGATCCAGTGGGGATGCCAGGGCCGAGTCCAAGGAGGGAGATTC---------TGGAGCCTTTGGGGCTGGCTGTGGATGGAAAT a score=33304 s mm7.chr19_random 1354905 1142 + 2598976 CACAACTGCATGCTCCCCT-TCACTCACCTCGGTCTCTTCCATATCACCCATGTCCAAGAAGAGGTCGAGATCACAGCCATGAACATCAAAGCTATTTACAGTAGAGCCAAAAGGATGGACCACACAGCCTGGGTACCAAAAAATAAAGATAAAAAAGGTACTAGGGGGCTGGCAAGATGGTTCAGAAGGTAAAGAcctgataagctgagtctgaccccaggacctgtgcaggagaaggagaaccagctcctgaaagtcactctcacctccataagcatgtgtgccactcgTCTGAACATAGAATAAAGAGCGGTAAAAGGACAGGGAGCTCCCCATTCAAGAACATACTCAACTACAAAGACAAAAGAGCAAGAAACGAAATACCTACAGCTTAGGGAGGGTTCAAAAATAGGAGATGGAGACTGACAGAGGTGTAAGAGAAAGCTCAGATTACAACAGGG----GACTCACCAGGGAAGAACTCTGTGAAGACCTCCTGCATCAGGGCCACAACAAGGTTCCGAAGCTGCCGCTCAGCCTCAGACAACTCCCTCAGTTCCACAAGCTTCACCATCTGGGCCCCCACATCCGCAGCCTCAGCCAGTGCTTGGACCAGCTGGTGACTACTTGAGTCCACTCCTTTGGGAGACTTGGAAGCTGGGCTCTGGAACTCCTTCTGCTCCCTTGGCCGGACTCGAAGTCCATGTCCCCCAAGGCTGTGCTTGGGCTGTGATAAGACAGCCTCCCGAGCACTTATGTCTCCCATCTCCACGATGGCAAACACCCCCTGGAAAACCA-CATGAGAGCAAAGATGATGGTCTTTGGCAACCAAAAATCCAACCaaaaaaaaaaaaaaaaaaaaaaaaaaaGTCTCAAAACAACAACAACAAATCCAAACATATGTTTTAACAGTAGATGAGAATCTTTGAAATGGGAACCAGCCCATATACTGGGAATATTTACTTGTTTTGT-------AAGAGGGAACATACTCAGATGTgtcgtcgtcatcgtcgtcatcgtcgtcgtcACCCTTATCCCATACATTTTTATTCCAGGCTGCCAATTACAATTTCATCTCTTGCCTTCTACACTTGACAGTAACTTAATTTCAGAGGTTAAAATAA-GATCCATCaagccatgcttggtgg s bosTau2.chr29 32036900 883 + 45822729 CACAGCTGC---CTCCACGGTCACATACCTGGGGCTCGTCCAAGTCCCCCAGATCCAGGAAGAGGTCGAGATCACAGCCATGGACGTCAAAGCTGTTTATGGAGGAGCCAAAAGGATGGACCACACAGCCTGGGTGCCGAGAA-----GAGAATAAAGGT---------------------------------------------------------------------CAAGAGA-------------------------------------------------CACT-------GCAGGGAATAA---GTGGTAGAAG----------------------AACATAACGTGGCACAAAGATGGAAAAGCAAGCAAGTGAACACCACTAGCTGAGGGAGGCT----------GGGATGCAGAC--ACAGAGG-----------GCTCAGAC-AGAGCAGGGCAGTGACTCACCAGGGAAGAACTCTGCGAAGACTTCCTGCATTAGGGCCACCACAAGGCTCCGAAGCTGCCGCTCAGCCTCGGAGAGCTCCCTCAGCCCCACGAGCTTCACCATTTGTGCCTCCACGTCCGGGGCCTCGGCGAGTGCTTTGATCAGCTGGTGACTGTCGGGGGCCACTCTTTTGGGGGACCTGGAGGCTGGGCTCTGGAACTCTTTCTGCTCCCGTGGCCGGACCCTCAGGCGACGTCCTCCCAGGCTGTGCTGGGGCTGTGACAAAACAGCTTCCCGGGCACCCAGGTCCCCCATCTCCACGATGGCAAACACACCCTGTCAAACCACCACAGGGACAATGACGACAGTTCTGG--AACCAA--------------------------------------------------------GAATCCAAACATGTGGTCTAACAGTAGGTGGGACTCTTCAAAATGGGGACCACACTATAAATTGGAAATATTTGCTTCCTATTTCCAGGACATCAAGGAACATATttatttattttttagctgt-------------gacataaggcttat----ggaatcttaattcc------ccaaccagagactgaacccttgcc-------cttggcagtga---aagtgcagagtttaaaccactggaccaccagggaattccTGCTGG a score=23140 s mm7.chr19_random 1359012 681 + 2598976 atacatGTCTGGTAAACAAGCCCTCCA-TAATTAATACTGGTGAA----TAAAAATCCAA-AGGTGTCAGAAGCT-----------CACCAA-CTGAGCTA--CTTAATGTTCTGAATTGTCTACCAAGGGCAAGCCA----------------AAACAGACTGCAGGTTTCTCTCTCT------------------GCATATGAAGCAAACACATTAATCCCAGAGCCATTCACTCTACCTTGTCCTTGTCCATGACAATATTGGCCACAGGGCCAAATGTCTGGAAGTACTCAGAGAGCTGAGCAGAACCCACATCCCTGGGGAAGCCACTGACAAACACACTTCGGAGTCCCTGTGCCTTCCTGGTAGCTCGGAGTTGCACCAAATCCCGGTGCTTCCGGCCTTTCAAGTGGGCATCGAGGCTGGGTCCTGGAGAGACAAATGTCAGACGTAAGCATAAAAAGGGTCTGTTAGTGTACCTGTTCTCTTGCTCTGCTCTGTACATATGGACATCTTC-TGTTCCTTCAACGAC----AAAGGGTGACACTGG---GACAGAGTTGTACCTCCTTCCA-CACTTGATATTCTTCCCTTTTCTACACAGTGCATTCTCTAAGGGGTCTAAGTGAGAAAGGGCTACAGTGTAGGTAGGTCTTAAACCAAACCAACAAGAAGCAGTAAG-CAAAGAAACATCTGCACACTGGAGAAGAATTAA---GTAACTTGTCCAAGGCCATATGTA s bosTau2.chr29 32039970 736 + 45822729 ATAAATAAATGACCAACAAGGTCCCCAGTGACTAAGTCTGACAAACTGATAAAATCCCAGCAGGGGTCGGGGGTGAGGGTGAGAGACACAAAGCTGGACTAGCCCCCAAGTACTGCAGTGCCCAGCAAAGTCAAGTCACATTAGGAACCAGCAGAAACAGTCTGCTGGTTTCTCTCCCTCGTTTCTTCTAGTGTGCAGCACACGTGACTCATTCTTTACCCCCAGAGTCATTCACTCTACCTTGTCCTTGTCCATGACAACACTGGCCACAGGTCCAAATGCCTGGAAGTACTCAGAGAGCTGAGTAGAATCCACATCCCGGGGAAAGCCACTGACAAACACGCTTCGAAGTCCTTGGGCCTTTCGAGTAGCTCGTAGTTCCACCAGGTGCCGGTGCTTCCGGCCTCCCAGGTGGGCATCAAGGCTGGGTTCTGCAAAGACAAGCGTGAAACAAAAGCATCTGAATCGCGCTTCAGTGTACCTA--CTCTGACTTTGTTCTCTGCATACCTAGATCCTAGTGATTCTTCCAAGCTGCTGAAAATGTGAGTTTTGAATAACAAAGTCCTGGCTCCTTTCAGCTTCCTCTCTTGTCCATTTGTCTGTACGGTGCAT--TCTAAGTGGTCACCAGGAGAACTGGCTGTA-CACAAGTATTTCTTAAACC--ACCTTTAAG----TGTAAGATAGAGCAACACCTGCACACGGTAAAGAAACTAACAGGTAACTTATCT-AGGTCATATATC a score=25743 s mm7.chr19_random 1359952 1299 + 2598976 TTCTCAGACATATGATGGAAA---TGATAGTGTCTAACATATAGGCATCATTCATGTACAG--CTCCAGCC--TTCTGGGATGTGGGCTTGGATGTGTAAGTGTAGAAAATTAGCT-ATTATTTAATTATC------------AGTCAGCTGCTTGGTGCCATGGAAGCATGTTATGTGAA--CAAAGAAGGCT--CCTAAGTTGCTGGCTTGCCCTAATGAGCAGAGTGCTGGGGGGGGGGGGGGGGTGTCATTCACAAAGAA----AATACTAGAAGGCCCTGTTTAGGGGAGATCACAATTGCGGACATAAAAAGTAGGATCTGATGTGTCATTGAGTCGTTCACAATGTCACAGAATGATCTAGTCCACCTTCCCTACACC--TTTTCCTCACTGGCACCTTCGG-----CCCTCATTCAGATCACGCTATTTCACTCATCCTCGCCTCTAGAGAAAGCCTCCATTGGGGAGTCTCCGACTGAATTACTGCCTTCTCTGTGAACATAC----------CCGTGGTGTACTG-AAACTACCTCAG--GCCAAACAATGAGTTCCT-----------AAATCGCCTTCCCTACTCCAGAGACCAGCAGAAGTACCAGAAACAGAAGGGATGGACAGCGGGTGATGATTTTAAAGGGAATAATGAAACTTTCACTATGGAGATTTTCCATAGCAGGAACCACAGGT---------CAGATTTTTCCCCACTCTCCAGTGCCCTAGGATATGATGAGTGAAAATAGGTGGATGACCCTATTTTCAAAAACAAAAACACCAAAAACACATAACCTAGATAACCCTAACTTTCACTAGCACCC--------ACCCTCCTCCCTCACTAGCCACCGCTTACGGTTGGCTGTAGTAACATCGCAGAGGCAGCAGCGAAAGCGGCCACGCGGCAGCGATACAACGTCCGAATCCACCGCCGCCATAGCCACTCTCCGGTACGGAACGCCTACAGCCTATTTCGCCGGAAACACACCGGAACACACAACTAAAAATTGTAACGTGCGTGCGGGGAAGCCACTTCCGTCAATGTAGTAGGAAGTGACGTCGTGTCCTTTGCT-----GCCATATTCCTCCAGAAACCTCGTTCGTAGGATTGAGAGTTCC----------------AGCTCTAAAACA-CTTTCGGGAAAGGCCGCCCTTCGACGATGCTTATTGGCCTACAGTTAACTAGTTGGAGAGCTTCGTTCTACTCCAGCGTTGATTGGCCCGAAGAATCGTGAATATTCATTAAGCAGCCACAAAG-------------GCGTGCTTG-----CTTCTTGACAGCAGAAGTCCTTCTTTGCCAAGTGGTGGCGGGCGATCTATGCCTTTATTTCA--------------CCACACAACTGCCCCCTCAATCTCTTATTT s bosTau2.chr29 32041048 1328 + 45822729 tcctcaggtatgaaatggagatattaatacttcctaccacatagATACTATTCACACATAGCACTTCACCCGAGTCTGGGACATG---------ATGAATGTGGAGAAACTTAGCTGACTTTTTAATTTTCTCTTTCCCTTTGAGTCAGCTGTTTGACATCACCAA---GTGTTATGTGGGGCCAGAGAAGACTACCCTGGATTTCTGGCTTGCCCTACTGGGCA----------GTGGTAGGGCATTTTTCATTCACAATGAAAAAGAAAAATGAAAGA---TGTTTAGGTGAGATTATGATTCCAGACTTCAGAAGTGGAAGCTGAGGTTTCACTGGGCCTCTCGCACTGTCATAAAAGGACGTGGTCT-CCTTTTCTAAACCCACCTTCCAAATATGTATACTTGGAAGTATACTACTTC--ACCACGCTACTTCAC-------CATCTCTGGGGAGCTCCTCTTGTAGGGCTCCTTTCCC-----TACTACCTTCTCTGTGATCCTGCAGCTTTCCAAACAGAGGGTATTGAAAATTATCTCCATCTCTAGATTGTGAGCTTCTTCACCTCTCTAAATTCCCTCTCCCCGCCCTAGAGCT------------------------GGATAGTTAAAGAGGG---------AATAAAATAACGAAATTTCCGTCGTGGAGATTTCAGATACCGGGACGCTGGGGTGTAAGGTGCTGGGACTCTCCCCACTTTGTAATCCCTCCGGACG-GCGGAGAGAAAACGGAAGTGAGACCCTACC------AACAGACTTGGCAAGAAC-TATGACCT--GTAACCCT-ATATTCACTAGGACCCAAAAACTAAACCGCCCCCCCGAGTAGCCACCGCTTACGGTTGGCTGTAGTGATGTGGCAGAGGCAGCAGCGGAAACCCCCACGAGGCAGCGGCTCGATATCTGAATCCACTGCAGCCATCGTGACTCTCCGGTACTAACAAAATGCAACCACCTCAGCCACG-----ACCGGAACTCCCTCCTACAAATGGCAA----CGCTCTGGGAAGCAACTTCCGCCGGTCCAATAGGAAGTGACGTGCCGTCGGTCAATCGCGCGGTACACGCCTGCTAAAACCGAGCTCTTTCGGCTCAGGGTTCCGAGTCCTGCCGGAGTTAGGTCTCTACCAGCTTTTGGAAAA------CTGTCCACGATGCTTATCTGCATGCGGTAAGCCAATTGGTGTGCTCTGAGCGGTTGAGACGTTGATTGGCCCCAAGAG-CATGAATATTCACAAGGCAGCCACAAGGTCTGAGCCGGGTTTCTTGCCTGGCACCCTCCTTGACAGCCGGCGG-TTTCCTTGCTGGGTGACCTAGGGCAGGCTGTGCCCTCCTTCGAGGGGCAGTAGAGACCCATGGGGCTGTATCCTCAACCCCATATTt a score=78595 s mm7.chr19_random 1361333 2740 + 2598976 TTCCTTTCTCTGCAGCCTGATCCTTCTACAAG---TGTTCTCAG--AGCTGTCCATCCCTG----------TCTCTCCCACCCCCATCAGCTGGATTCAATGAGCGCAATGCCAGATGGCTGATAGCTTAGTCTGCCAGTTTCTTCCACAGATGTAGTCTGAATGAAGTATATTAACGAG---------------GCCCGTTTCAAGGCAGTACAATGAAGAACTGACTACAGTGGTAAGAGATAAGGACATTCATTCAAGAATGTGGA----ACGGGAAG----TGTAGCAGATCCCCAACCAGA-ATTAGTCGTGTGGTTTCAGAAGCAGAGGAGAGTATGAAAGCTGG-------TCGATCATAGGGCCCGTGATGAAATGGAAGGGC-TACCAGGTGAGAGCTCAGCAGCTTGTGCTGTGATTATCAGCCGCACAGTA----------------------GACCTTAGGCAGA------ACACCAACC--------AGTCTGCGACCTTGACT-----------------------------GAGTCACCTATAAG-------------GCCCTGTGT-CCCTCCTTATTGGGCCCTCCTCAGGCATCTAATCCTTATGCC-AACCCAAAAGAGCAGACCAAACCAAAAAAGAGAATACTGCAGTACGCTTAAAAGCAGGGGCAGTTGCTAAGGTTGA--TTGTTAATCC-TGAGGCAGCAGTCTGTATACATACACCACTGAGCTTGAATTGCAGTCTTGCTTCCCCGTTGCTGAGATTAAAGGTAGGG---ATGTGCCAACACAAGCAGCATTT--GTTGGAGTACATCTTTGCCTGTTAGCTAACATTTCCTAGAATGCCTAAATGAAAGTTAAggctgaggatgtaggtagctcaatagtagagcacttgcctagcattctctgggccctgggaccaattcccTGGCATCCAAAGGACAAGTAGGTAACAGGCAGACATCCTCACACCCTTCTGTGGAG-------------ACGGAGAGCCCTTAGAGCTCGG-------AACAAATCTAGACCAAGATAATGCTTGCACTTCAGCCC------CAAT--GGGAGAAGCTCGAGTCCCACAAGAAGGC--TAGCTGGCACAGACTTCCTCCCAGTCC-GGCTGCATGTCTCAGAAAGCTGCTCCTAGACCAAGCACCATCTGTACCTCCTTCATTGTCCTTTGTCCTCTATTTTCCCTCTCAAAAACAC---CCCCAAAACA-----------------AAAATGCAGCGCACGCGCGC----------------------------------------------------GCACACACACAC-------------------------------------------------------------------AGAATAGCTGAGCCTGGAGGAGCTGAAGAAAACAGCTTTTTATTTGTCACTGTAAGAACCAATTACAGAATCTGAGGTT-AAAAAACAGACAAAAGATCTTTATTTCTGAGAATTGGCATATAAAAGGCAGAGGGAGAAAGGGGAGGGAA-GAAAGAGTGAGCATGGGCTGGGGTTGACGCCATCTTAGGGCTCTCAAATTCCAATTAGGAAAGTCCGGACACCGGACAGTAAGAGTAACCCCCCATTA-GAAAATAAGGAAAAATGAGACATGGCAGT-----------GTACTTCCCTTCCCCTGCCAGGGACTAACACCTGATA--TGTTTACTCTTCCCCTCCTCCAT-CCCTTTTACAAAGGGAGGT-TCATTTTTAAAAAATTAAAAAACCCTCCCCCCC-AACTGTCCAAACCACCTGTGGGTCCCAGGCCCC-AAATAGGGTAGGTACACACAC--AGGCAAGTTCCTATAGGCTGTGAAGCCCAAAAAGGGACGTTACTGGCAGTTACAGGCAGTAA-----------CTAACACCAGAGGGTGTCCAACCCCTGCAAGGACACACACACACCAGGGTCAACCCTCCCTCACTCCTTACTCCCTTTGATACCAAAAGGAATGAAGATTTGTATGTCCTGGGCACCCACCCCTCTACCTCTCATCCCACCTCCCTTCCCCTAAGATGCTCAATCCTCCAGGACAATGGGCTCATTGGTGCTGGCAGGATGTGAAGAAGCGGGCAGAGGAACTGGGGGCCGCACTGTCATCAGCGTTGGTTTCACCTTCAGGGGTAGGTTGGGCCTTCGGGCCGCTCGGCGCATTTCCAGGTGAGTTAGAGCTTTCCTTAAAGCCCTGGCCAAAAAGAGCAAGACAGAAACAGGAAAGCTTGATGAGCATCAAGACTCAACCAGGTTCAGCTCCACAACGCCCTCTACAGTTCTACCCTCTGG---------TACCCACATTC------------------TCTTGTGCACCTA-TCTTTCTCAGATACGCCTA-----CTTCCAATGCTGGACAACTTGGATTGCCAGCCTCTCAGCCCCT--CATGGTGGACTCCCTCCCTACCTGGTGTCCTTTGTGGCCACAAATACCACTGGATTGGGAGCATCAGCAGGGTTTAGTTTCTGACGCTTGGCTGCTGGCTGTGAGCTTGAACGAATCCCTGAAGCCAGAGGCCTTCCATTGGCAGAGAAGGGGACCCCTGCCCCTGCCATCTGGAAAAGGATGGGGT-ACATAATGAAGGAACTACCTTCCTTAGACTCCTATTAGAAACAAAAGCCCACCCTGT-TCAGCTTTCCCAAC-CCACTCTGTCAACTCACAGTCTCATAGGAACGTTTCACCATAATGCCCCCCAGGCCTCGATTCTGGGTCAGCTGGTTTCTGTTGATTGGTGTCTTGGTACCCCGAGGTGTTTTTGGTTTCAGAGGTGCCTGAGCCACTGTCAGTAGAGGGAGAAGGGGGATGAAATAGAAAATGTTCCCACTTTCCTTGCCTATGTAGTTTCATTACCATTCTTTCCTCCCTCTCTACCCTGACCAGTTGTTTACTCTAATGGCCTAAAGATTAATAATGGAGAAAATGGCCTATCAAGCTACTTAACCTTATTTAAAAACACAT-------TATGCTTTCAGATCAGAAAATACGTATATA s bosTau2.chr29 32042541 2853 + 45822729 CTCTTTCCTCTACCGTCGGTCCTTTCTCAGAATGCTGTTCTGCGCCAGCTTCCTAGCCCTGATTGGGGAGCTCTTCCCCGCGCGCACCTTTAGAACTCCACGGGCCCACAGCCAGATGGCC------------------TTTCTTCTTCAATAGCCGTCTGCGTGGAG--TATTCACCAGATGCCAGAGCCTCCCGCCCATTTAAAGGC------ATGCAGCCTAAACTGCTGTGATGGCAACTGCGTAAAAACATTGGAGGGTGCTGATACCACAGCAGACCGCTGTAGTGGTCATTCCTCCCGACACTAGAGGTGTTGGCTTAGGCCAGGAAGAGAGCAAGGGAACTGAGGAGGCCCCAGAGACAGGGACC---ATGAGATAGAGGGGCGTATCAGCT--GGGCTACGGAGCTCCTGCTGTGTTGATCAACC-CACAGCATTGGGCTGTGAAAAGAGTAGCCGACCTGAGTCAGGCGTCTCAAACTAAACTCGAGGTAAGTCTGCTGCTTAGGCTTTTCCCTATCTCTAAAGAAAGTGCTCAAGGAGCAGACAGTAAGCTTAACTTTTCTCTCCCAAGGTGCTCCTCTCATTGGAATCAGCTC--GTGTCTAATCGGTCTCCCAAACCCGAAAAGGCAGGAAACACCACAAGGGGGA-------------CCTCAATATCAAGGCAGCTGCTGAGGCTGGCCTTGGGGATCCTTGAAGTAGCAG----------------------------------------------------------AAAAGTAGGTGGCATGATCCTAC---AGTACCCTCCAAAGTGGTATACATCCTGCTCTGGCCTCTAGCAACTCCCAGAATTCCTTCAGTAAAAAGAAG-----------AGGGGGAGTAAGAGT-------------------------------------------TGGAAAATAAAGAAGAAACTAGACACACACGCACACCCCC---TCCCTCTATGGAATCCACTAGTCAATTCGGAGAACCAGCACATCGCAACTGTTTTAATGAAGCTGGTCCAAGATGGTGCTTGGGCTGCAGTACTGTAGGCAGCTGGGGAGCAGTCTGGACTCCACAGGAAAGCAATAACAGGACCAAGCCACCT----GTCCAGGCTACATAGCACGTAAAGCTGTTCCCAGAGCAAGCCCCATCTGCACCTTCTCTATTGTGCTTTGTCCTTTATTTTCCCAATCCAAGACACACACCCCAacacacacacaccccgtcctatagaagccaccacacacacaccttcctatagaagccaccagacacacacaaacaccccctcctacagaagccaccacacacacaccttcctatagaagccaccagacacacacaaacacctcctcctacagaagccaccacacacacaGCAGAGAATAGCTGAGCCAGGAGGAGCTGAAGAAAACAGCTTTTTATTTGTTACTATAAGAACCAATTACAGAATCCGAGGTTAAAAAAACAGACAAAAGGTCTTTATTTCTGAGAACTGGCGTACAAAAGGCAGAGGGGACAAGGGGAGGGAAGGAAAGAGCGAGCATAGGCTGGGATTGATACCAGCTTAGGGGCCTCAAACTCCATTTAGGAAAGTCCGGACACCGGACAGCAAGAGAAACCCCCAATTAGGAAAAAAAAAAAAAAAAAGACATGGCAGTCATGGCAGTGCACGCCCCCCTCCCCCAACCAGATACCACCACCTGGTATCTGTTTATTCTTCCCCTTCCCTATCCCCTTTCACAAAGGGAGGCaaaatttttaaaaaattaaaaaaCCCTCCCCCCCAAACTGTCCAAGACAACTGTGGTTCCTACCCCCCAAAACAGGCTAGGTTCCCACAATGAGCCAAGTTCCTGCAGACTGCCCTCCACCACCAGGCATG-GAGAGGCATTAGAAGGGGACAAGCCTCCAAGTGCTAACACCAGAGGGCGCCCGGCCCCTCCAAGG--ACACACTCATTTGCTCCCTCCCTCCTTCACTCCTCATTCCCTTTGATACTAGAGGGAAGGGAGGCTAG-GTGCCCTGTGCACCCA-CCCTCTAGCTTTCAGACCACCTCCCTTCCCCACAGGTGCTCAATCTTCCAGGACAATGGGCTCATTGGTGCTGGCAGGATGTGACGAAGGAGGAAGAGGGACTGGGGGCCGCACTGCCATCAGCGGCGGCTTCACCTTCAAGGGCAAATTGGGCCTGCGGGCAGCTCTCCGCATTTCCAGGTGGGTCAGAGCCTTCCGCAGGGCTCTGGCCGGCAAGAG-----AAGAGGCAGCAAA--------AAAACCAAAGACCATCAAGGTGAAGCTCCACA--TTCTACTACAATGCCACCTTCCAGCCCATCTTTTCCCAGCATCCCCCCTCCCTGCAACCCAGTCTCGGGGAGCTGCTCTTGCTCAGATCCTCCTATTTCCTTTCCCATACCCACCCATCTGGGTTGTTGACCTCTCGGCCCCTCCCATGGAGGG----CTCCCTACCTGGTATCTTTTGTGGCTACAAACACCACAGGATTAGGTGCATCAGCTGGGTTGAGTTTCTGACGCTTGGCTGCTGGCTGTGAGCTTGAGCGAATCCCTGAGGCCAGAGGCCTTCCATTGGCAGAGAAAGGAA------CTCCTGCCATCTGGAAAAAGGTGGGGCAACACAGTGAGAGAGCGGACTCCC--AGACACCCATCAGATATAAAAG------CTATAAAAGCCCACCCAACTCCACTTGGCTCACTCACAGTCTCATAGGCCCGTTTCACCATGATGCCCCCCAGTCCCCGGTTCTGGGTCAGCTGATTTCTGTTGATCGGTGTCTTGGTACCCCGAGGTGTTTTTGGTTTCAGAGGTGCCTGGGCCACTGTCAGAAAAAAATTAAAAGAAAC--CATGGAGAACGTTCACACTTTC----TCTATG-----------------------------------------------------AATACCCGAAAG--TAGTGATGG-GAGAGGGGTCTGACAAG-TAATTAGCAGTATTTCAAAAGTCATATATGAACATGTTCTTCCATCAATCAGTATGTAATTA a score=11610 s mm7.chr19_random 1364222 274 + 2598976 TGTGGACTCAGTGTCAAAGAAAAACTCTGGGGAAGAAGACTTAAGATAGTAAAATTTAGCTGTCAGCCTGACTGAAGAAAAGACTCTTAGAGAGGCT-GGCACCACCCCAACTGTCTCTCCACCTTCCACCCACCCTGGATTGGGTGTAGTTCCCCATCTCATACCCAGATCTTTGACGATAGTTGCCAAGGGCAGCCGCACCAGAGGGTGAATTTTCAGTGGCGTCTTGGCAGCCTTAGGAAGTCGGATCGAGCCTGGAGA--AGAGAGGAAGGCT s bosTau2.chr29 32045456 233 + 45822729 TCTGGACTCAGTGAGAAAGAAAAAAGCAGGGGAAG----------------------------------------AGAAGGGTCTTTAATAAAAGCCAGACACCACCT--AGCGGCTCCCCATCCTAAACCCACCCTGAGTC--ATCTAGCTCCCCATCCCTTACCCAGATCTTTGACGATAGTTGCCAGGGGCAGCCGCACCAGAGGGTGAATCTTCAGTGGAGTCTTGGCAGCCTTAGGAAGTCTAATGGAGCCTGGAGAACAAAGATGAAAGCT a score=23185 s mm7.chr19_random 1365503 448 + 2598976 ATCTCTAAACAC-CCGCTGTGGCCTAGTATCCCTACAGTCA--------------------CTGGGCTCTGGCCAGAGCAACTTTGGACTCATTGCTAGT-----ACTCCAGTCCTTACACTCTGCCTTGATGGCATTGGCATTGATAGGTGCATAGGGTCTTCGGGCAGCCCTCCTTGGCTGTAATAGATCTCGGCACATTCGTCTGGCTAGACGAGTTAGCTTTGTGGTCTGGAGCAAGAAAGTTTGCCTGTTCTTAGCCAGCAACTTGGCCCGGTTAGCACTGGTTGTATAGGGGGAGAGACTTTGGGCTTCAGGTCTGGATAAATGACCTCTTGAGTGTGGCTCCTAGAGGAATGACATATGAAAAAGAGAAA--------TCAACAGTGCAATTCTGTCCTCTGTCTCCTGCAGACAGCCAACTGTTTCTACCTGACCTCTTCAGTGAAACCCCGCCCAACCATCCTGGCTTCCCAA s bosTau2.chr29 32045873 468 + 45822729 ATCTCCTAACAAGCCCTTGCAGCCTACTACCCCTGCTGTCATTAAACACCCAGAGAAAACCCTGGTCTCTGGCCACAGCAACCC-GAACCTGCCACCAGCCCAGCACTCCTGCCCTTACACTCTGCCTTGATGGCGTTGGCATTGATAGGGGCGTAGGGTCGTCGGGCAGCCCTCCTTGGCTGTAACAGGTCCCTGCACATGCGTCTGGCAAGACGGGTCAGCTTTGTGGTCTGGAGCAGGAATGTTTGCCTGTTCTTAGCCAGCAGCTTGGCCCGGTTGGCGCTGGTTGTGTAGGGGGAGAGACCTTGGGCTTCTGGTCTGGACAAATGACCCCTCGAGTGTGGCTCCT---GGAAGGACAGAGGATAAAGGGAAAACAGTCAGTCACCAAGGC--TCCCTTCTTCCACTGCCAGCAGAGGGT---TTATTCCCACCTGATTTCTTTGTTGCTGTCCTGACCA-----CCTGGCTCCCCAA a score=23875 s mm7.chr19_random 1366291 505 + 2598976 cctggagcttgctttgtataccagactggcctctaactcacccacctgcctcagtcaccATGCCAAGTTCCCACCCACTGATTCTTACTGTGGTGCCCCGAGCAGCCCCTTCAAGTTGGGTAGGGGTCTTCAGTCCCCCGTATTTCTTCCAATAAATCCAACAGGAAGCACAAAGTCGGCACTGCATGTTAGGGGGTCCCCAGGCATACCACTGGGCAGACTGTGTGGCTACAAGAGTAGAGAGAGAAGGGAAATTTGCTGGCAGGAAAT--ATGCCACCCAAGATCCTCAAATTCCCAGGACAGAGAATAAGCCACCCTAGGACCACCTATCCCCAGCAACCC-TGTCCCCCCTTGGAACTCACTGTGGCAGCTCTCACAAGTCAGGCCCTTCTGGAATCCAGCCCCATTCATGCCAGGTTTTGAACCCACAGAAATGATCTGGTTAGGGTTTGGCTTGGTACTAATGAACGAAACAAGAGGAGAAGACAGAAGCTAGTTAAGAAAA s bosTau2.chr29 32046416 442 + 45822729 CCTAAAGCTCACATCAATTAGCTTACTGCTCTCC------CCAACCTGC------------------TCCTCATCC----ATCCTTACTGTGGTGCCCCGAGCAGCCCCCTCAAGCTGAGTTGGGGTCTTCAGTCCCCCGTACTTCTTCCAGTAGATCCAACAGGAAGCACAGAGGCGGCACTGCATGTTGGGCGGGCCCCAGGCGTACCACTGGGCAGACTGTGTGGCTGTGGGAGCATGGAGTGGAGGGAA-----CAGTCAGGAGGTAAATGCCACTTGAGCCTCTCA---------GGCAAA--------CACC------CCACTCACCCCCGGCATCCCTTATCCCCCTCTGGAACTCACTGTGGCAACTCTCACAAGTCAGGCCCTTTTGGAATCCAGCCCCATTCATGCCAGGTTTTGAGCCCACAGAGATTATTTGGAGAGGGTTTGGTTTGGTGCTAATG----------GGAGAGAAACCAGGAACTGGTCAAGGAAA a score=1781 s mm7.chr19_random 1366956 168 + 2598976 AGGAAGACACCATCT-----------------------CCCTTTCTGCC-------------------------------------ACACTTACTAAGTGGGGATGTAGACCTGTTTCAGTTTGCTGTCTGCTTCAGCAGCTTTCAATCTTTTCTGTAAGAAGGAGAAAAACAGAA-AGAAATTCAGAGCATCTCAGTACAAATTGAAATCAAACAAAAGAAACAGCAG s bosTau2.chr21 49389795 200 + 49724630 AGGGAGGCACCACCTGGCCACGTGAAGCCAGCGGCGGGCCTGGCCCACCCAGGGACATGGAGACACGGGGGCGGCGTTCTGGGGGTGCACTTACTAGTTGGGGATATAAACTTGCTTTAACTTGCTCTCCGCTTCAGCCGCTTTCAAGCGTTTCTT---------AAAACACAGAACATAGGGTCAGAG--------------------GCCAGCAGCTGGGTCTGTAG a score=10195 s mm7.chr19_random 1367124 200 + 2598976 AGAGGTAAGCAGATAGCCTCTGGTCCAGCCTCCCAGCCAGCCTGACCCATACCTGCTGAATATACCGGTCTGTGGTTTTCCACATGTAATAAAACTGGACTATGCTTGCAAGTGACTTCCAGGGTAGCTAAAAAGAACAGC---AAACAGGATGAGATGGCATGT-------GATCCTAGCTCCATCGTCGTTCTCC----------CTCCTCCTAGTCC s bosTau2.chr29 32046962 216 + 45822729 AGAGGTGAGCAGGGGGCCTCTGGTCTAGCCTCCC---CAGCCCAGACCTTACCTGTTGAATGTATCGGTCTGTGGTTTTCCACATGTAATAAAACTGAACTATGCTGGCCAGTGACTTCCAGGGTAGCTGAAGAG-ACAGAGAGAAGAAGGGTGAGCTGGGATCTGGCCCCAGAGCCTGGTTCCCTCATCTGCCACCTCTTCCACCTCTCCTCCTAGCTC a score=51252 s mm7.chr19_random 1367329 1227 + 2598976 ACTTACAAAGTCCTGGCGGATATCATTGAAATCCTTCCCGTACTTCTCCAGAGCCTCTTCAAACAGCATGGCTTCAGAAGCAGACCATTCCTCCATCTCATCCCGACAGAGCACCGGGCCTCCCTGTGGTACTAGGGTTGACATAGCCTTGGCCAAGTCATAGCCATTCCTTTGCAAGGTATCCATGGCATGGAACTACCAAAAATATAG--AACAAAGCTAAGGA-----------------------CTTGCTACTCTTTAAGCACCTTCTTC---------AGGACTCCCGCCC------------------------TCCTCTCCTGCCTCAACACGCCCAACTATCTATCAGCTGGCACTTACCAGAGTGATATCTCGGGACGCAGCAGCTGCACTCATGTGCAAGCTTGGCTGCCGAATTGAGCTGCTGCAGTCTAGGGCTCTCGCGAAGGTTCCCACAGCTCTAAA-GAGAGATTGAGAAGTCAAGAAGGGTTCTCCCCTTCAAAATTCAAGCAGGTTCAGGAACTAATTAGAAAAAGAAAATGCCCAGGCCTAAAACAAAGCCCACTTTaaaaaaaaaaaaaaagaaagaaagaaagagagagagagagagagagagagagagagagaaagaaagaaagaaagaaagaaagaaagaaagaaag---------aaagaaagaaagaaagaaaTTGGATGAGACGCAGAACTCAGTCCATTCCTCCC-CAGCCCACCTTCCTGATCCACCCA-CCCTCACCGGGCCACCACGAGAAACTGATCAATCTGCCGGTCTGTGAGAGGGTTGTCTGGGTCCCAGACTTTCATCTCCATCTTCTGTTGGTTTCGATTATCTGATTCTCCTGAGGA----AACAACAGAATCACCACGGAGGGAGAGAGGGAAATAACTCATAGTCACTCACAATGGCTCTTTTTCCTCTGCTCTGCTTGGAGTCTATCAGAC---------CTCAGAACTCCCCTCCCAGCTGTGCCCACTTGTCTCTCTCATGTTCCTAA-GTCTCACCCTGTCAGAGCCA-CAACACAACACCTAGCAGATTCCACACTGGTACCCCAAATCAAG--CTATCAA-CAGAAACTTTCATGTTCAAGCACTTC-----------------TTGTTCTGTTGCTTACCCTCTGCCAAACGATCTGGGATCTCAGCTTGGAATTTGCAACCAACTCTGATCTCCCCTTGATCAGCCAGAAGTGTCTTCTGCACAGGATCAAACACCAGTGAGTAAAAAAAGCAGTCCTGAAG--AGGAAGAGAGGAGGTTAGT-GGGAAGGAATCTGCATGGACAG s bosTau2.chr29 32047183 1227 + 45822729 ACTTACAAAGTCCTGGCGAATATCATTGAAATCCTTCCCATACTTCTCCAGGGCCTCTTCAAACAGCATAGCCTCTGAGGCTGACCATTCCTCCATCTCATCCCGACACAACACTGGCCCGCCCTGGGGCACCAGGGTTGACATGGCCTTAGCCAGATCATAGCCATTCCTCTGCAACGTATCCATTGCATGAAACTACAGAAAAGGTGGGAAGCAATGCTGATGACCTAAAACTCTCAGCACCACTCCCCTGCTGCTCTTTAAGTACTCCCCCCACCTCAGAGATAACCTCCTCCCTGCAGAGTTCCGAGGCTCTACAGGTCCCCACAAAACACAGCCCACCCAACTACCCACCAACTTTTGCTCACCAGGGTGATATCTCGGGAGGCAGCGGCTGCACTCATGTGCAGGCTTGGCTGCCGAATGGAACTGCTGCAATCTAGGGCTCTTGCAAAGGTCCCCACAGCTCTAAAGGAGAGAGTGAGAAGTCAGGGAAAG--------AAGAAAGTTCGAGTGGGCTGAGG---------------------------------AACGAAGCC-----------------------------AGATGAGGTgggggggggggggggggggggCGGATAAAAAAGGACAGCACCCAGGCCAAAAATAATTAAAGTCCATCTCTTAAGA------------------ACATGACTCAGAACTACGTCCACACCGCCCACAGCCCATCTTCCCCATCCACCCACCCCTCACCGGGCCACCACGAGAAACTGATCAATCTGCCGGTCTGTGAGAGGGTTGTCTGGATCCCAGACTTTCATCTCCATCTTCTGTTGGTTCCGATTATCAGATTCTCCTGGGGAGTGGGGAAGTGGTATCATCCAGGAGAAAAATAGG----TGCCTTG-------ACACAATAACACCTCATC-----TCCTCCTTGGACGCTATTAGCCATCTTAACTCTCAGACTTCTCTTCCCAG-TGTGCCCGTCTGCCCCCTTCAGGTTCCTAAGGTCCCATTCTGCCCGGGTTGTTAACACAGAGCCACGCAGACTGTGCAC---CACACAAAGCCAAGGCCCACCACTCAGAGACTTTGATCTTAAGACATCCCAGTGGTCATAACCCAGTCTCTCCTGCTTCATACCCTCTGCCAGGCGATCTGGGATCTCAGCTTGGTATTTGCAACCAACTCGGATCTCTCCCTGATCAGCTAGAAGTGTCTTCTGCATAGGGTCAAACACCAGTGAGTAAAAAAAGCAGTCCTGGAGACAGAAAGAGAGAAGGTAAGCAGGGTAGCAGTCCTCATAGGCAG a score=24359 s mm7.chr19_random 1368651 519 + 2598976 CTTGCCTTTAGGGGCAACATTCTCTCACCTCCCTCTTATCCCAACAGCTC---CTCACCTCCTTGTCTAGATACTGGTTTAAGATGTCTGTCTCGTTCAAGAGAGTCACGCTGCACTTCCCCCTAAGAAAAAGGACAAACCCAAAAGTCCTGGATGAGCAGCCCTCCT-TACCTGCCATCTCCAATACACCACCCCCTTCTCTCCATCTTCTAAACAAGGGCACATAGACCACAGTGACCCTGATCGTCCTATACCTTATGTGGGTGGCTGGTAATGATTCAAACTGCCGAGAAAGAAAAAGCTCTCGGTGCTTCAGTTGATGTCTCTGCTGCTCGGAGACCCCTGGCTGTTTTGATTCCTCCTCAAACTCCCCTAGAA----TAGTGAGGAAAAACCAAGTCATAAACTAATTCAGAAACAGG-TACCTTAGCCAGCTAGCTAGTCTGGTAAAGG-----AGAGCCTACCTCAGCTGCTGCCCAGCACTGCTTTC-----CTCGGGCAGCTCACTCTTATCCTACCAGCCCCCCCTT s bosTau2.chr29 32048485 530 + 45822729 CCTGCCTTTCGGGGCAATACCCACTTCCCTCCCTCTTCTCCCAACACTTCTTTCTCACCTCCTTTTCCAGGTACTGGCTCAAGATATCTGTCTCATTCAAGAGGGTCACACTGCATTTCCCCCTACGGGAGAG---AAGTCAGAAAACCCTGGGTGAGCTCATTTCCTCTGCGCGGCATCTCCTGCACACCAGCCCCTCCTCTCCACCTTCTAAATAAGTACATGCAAGCCA-AGTGGCCCTGACTGCCCCATACCTTATGTGGGTGGCTGGCAATGATTCGAATTGCCGAGAAAGAAAAAGTTCTCGGTGCTTCAGTTGATGTCGCTGCTGTTCTGACACCCCTGGCTGCTTCGATTCCTCCTCAAACTCCCCTGGGAGATTTAGGAGGAAGAAAGCAAGTCAGAAACTAATTCAGAAAGAAGCCACCTTAA-AAACT--CTAAGCCAGGGAAAATATTTAATGTTTTCCTCACATTCCTCAGGGACCTGCCTTCCATATCCTTACCACACCACCCTTA-CCTCTTAGCCCTCCCGT a score=49381 s mm7.chr19_random 1369245 1579 + 2598976 TGAGAGTAT-AAGGATACCACAGAAATGCAC-CCAACCCTAGCTGCCAACACGCAGAAAGCACAAACAGAG-----------CCATAATA----CAGTGTG-ACATCATATTTAGCTCTTTCTTGCACAACCAGTCCGAGGTCCTAAAATCCAGTTAAG-------AAGAAGTAAAAATAGCACACATGGTCGCTGTTTATTTACCAGCTCCTCTTCATACTTCAGGACTCCTTGCTGTGTCTGAAACATCACATGCAACCTAATGCTCCTTCTCTTTCTACTTGGCTAATAATAGTTTGT-----GGGCTTTCAAGAAGGGCAACTCTGAAACCAGTGCCAACACCTTCCTCACCAAGAGGCACCAAGAGGCCTGCACTGAAATCTCCGTAGAAACAGTTAACCTGGCTAAGTGCCAACCAAA---GTAGAAGACAGA--AACCTCAGGCACATGCTCATCGGTGCATTGTTC----CCCTGAAAAATGGGGGTACAGATTTGGGGTGGGGGTGT-------------CCGTGTCTCTCTGTGCTCTAGGAAAACCCAGAGGTAGGGCAAAAAGAACCACACCCC---TACCCCTTCTGATTGGATAAGGCCAAGGTCAGCCCCTGCCAGATGGAGCCGGAAACCCCAAAGGGCCAGGAAACTTGGTAGGCCCAG---TTCATTAACCCTTTCATGACTGCAGCCTGAAAaagaatctaggagggaaaaagggagttaaaagaaaactaagtgatgcgggtagtgctggcacacgcctttaatcccagcaccagggaggcagaggcaggtagatttctatgttcaaggccagcctgatttacagagtgagttccaggacagccagggctacacagagaaaccctgacaaagaaaaaaaaaaaaaaaaaaggaaagaaaaaagataaaactaagtg--aaaaaaaattacaatataaagatcatagagaaaatgcagacaaagcaaaaataagtaaaaatgacactaactggaat---------ggagaggaaaaat------ggtgaaggcaGGG---AAGTCCAAGAGAACTGCTCCTAGCTTATCATCT----CTATTAATGTTTTGGCATCGCCTCCAGACTACAGCATAA----GCCTCTCTGTTATGCAGACTTCTCAAAACAGTATCTTCCTCTTCACCTTGGCCATCACTCACTAACCACTGTCCCAAAGTACCCAAAA-TGTCCCC---GAGTGCCTGCTTCTCTAAAGCTCTT-TTCATTTCCTATCTAAAT------ATCTCT----------CCACTCA---------------------------CACACATAAGCCTCATTTTGGCTTTCCTTATCATGGTCTGCCCGCCCTGCTTCCAACCCCAACGTGTAACAACAGGCCTCCCTCCGCAGACCAGGCACTTCCCACCCCCCCCCAAACTCACA-CCCTCCCTTGGGCATGCTGCCAGGGGAAACACCTGCAGGAACATGTCTAGTCCTCAGATCCTGGGGAA-GGGAGATGGGTAA----------GGAATGAAGACACTCACGAGCATTACTGTCAGCCAAGCTGTTGAGGCTACTAGAAATATCCCTTCGCCGGAAAAGACAGACAACCTTTGCTTCCACATTTCCATTTGCAGTCTAAAGGAGGGAGAAAAACCGAGAAGGAAAATTGGCCATTTGAAAGTGGAGATGCATgccg s bosTau2.chr29 32049292 1553 + 45822729 TGAGAGTACAAAGGCTGCCACAGAAACACACGGCAAACCCAGGTGCCAATGCTCAGATACCACTCATACAGCACACATCTGCCCACACCAGGCCCAGCGAGAATATCACACTTG----TCTCTTGCTAAACTAGCCTGGGGTCCAGAAATTCAGTGAAGATAAATAAATAAATAAAAGCATCACACAAAATTG-----TGTTTACCAGTTCCTCTGCAAATTTCAGGAGACTCTGC----TCTTAAACATCACATGCAACCCTA-ACTCTCTTGTTTTCTACTT-GCTAATAATAGTTTGTTTTGGGGGCTCTCAAGGACAGTACCTCTCAAGCCAGTGCCAACACCTTCCCCCCCAAGGAGCTGCAA----CTTGCCCTGAAACCTTAGTGGAAAGGGTTAACTTGGTTGGGTGCCAACCAAACAGGGAGGGGGCAGAAGAGCCACAGGCCCAGGCTCATTGGTGCATTGTTCCCAACCTCAAGGAGAAGGGGGGGGGGTGGGGGCCAGGGGTGTGCAGTAGGCTCCACCCCTTGCCTGTGTGCTCC--GGAAACCCTGTGCTAAGGCAAGGGGGACCACACCCCCCACAGCCTTTCCGATTGGACAAGACCAAGATCAGCCCCTGCCAGACAGGGTTGGAAACCCCAGAGAGCCAGAGAACTTGGTCGGCCCAAGTCCTCGTTAACCCCTTCACGCCCAATGCTCAAAGAAG----------------------------------------------------------------------CCCAaaataaggaaaa-----------------------------------taatttagaaaggaagaacaag---agaaaggg-----gaaagaaa----gccaaagcaggaaaggaaaaagaaactaaagaaaacag--aaagCTATGTATCTAAAAAGAT---------GAAAGCATCAAGAGAAGCAGGATAGGGTGAAAAGAAAAGGGAAAGATGTAAAATGGAGTACAGGGCTAGGTGAGAGAAGCTAGGCGAGGTGAGAATAGAGGAAAAGCGCAAGAAAA-TGTTCCTGGCTTCCTATTTTCTCCCATCAGTGTAGCCTTACCACCTCATGATCACACCAAAAACCTGCTTTCCTATTATGCACGCTTCTCAGTACAGTCTCTT-CTCTTCA----------CAGTCACCACCTATCATCCCAATATAACCGAAACTGTCCCCCTAGAG-GTCTGCTTCTCTAAAGTGCTTCCTCATCCCCGATTTAAATACTATCATCTCTTTTACATACACCATTCACAAAGGCAAATTCACAAATATACAACTCACACACAAGCCAAATTCTGGCTTTCCTTATCATGGCCTTTCCACCTTGCTTCTAA-ACCAACATGTAAAAACAGGCCTCCCTCTGCAGACCAGGCACTTCCCA----CCCCCAAACTCACACCCCTGCCTTGGGCATGCTACAAGAG--AACACCTGCAGGGACATGCCCAGGCTTCAGATCATGGGCAGTGGGAGACAGGGAAACCGGGGGTGGGGACAAAGACACTCACTGGCATTACTATCAGCCAGGCTGTTGAGGCTACTAGAAATGTCCCTTCGCCGGAAGAGGCACACGACCTTTGCCTCCACGTTTCCATTTGCAGTCTAA---GGAGAGAAAAATCGGTGGTGAAAACTAATCATTTGAAAGTGGAAATGCATAAAG a score=11319 s mm7.chr19_random 1371209 243 + 2598976 atcattaaaaaaaaaaaAAA-------------------------------CCAACTCCACTCACCTTATTGAGCTCCTCAATCCGTCTAACCAGGTAAGGATTGCTGGAGGAGTTCTCAAAATAGACGTAATCTGTAGGA---GGTGGGGAAGAAACAAGAGGATCAGAGGAGAGG-------------GCACCCAGATGA-------AAAAGTCGCTCTGTGTGGACCAAAATGAGACAAAATTCTAGATAGAGATGAAGTGGAGATGAGCAAGAGGAGAGAGTTA-AGAAAATAA s bosTau2.chr29 32051096 298 + 45822729 ATCTCTGAAAAAAGAAGACGGAGGTTGGGGGGTAGGGGGGAGTGGCGGGCCTCTGCTCCACTCACCTTGTTGAGCTCTTCAATCCTTCTAACCAGGTAAGGATTGCTGGAGGAGTTCTCAAAATAGACGTAATCTGTAGGAGGGGGTGGGGAAGAACCGGGAAGATCAGAGGAGTAGATGGGAGAGTCCAGCACCAGAGTGGGAGGAGCGAAAGGAGGCCTGAGTAGACCAAAAGGAGATAAGGGTCTAGGTAGAGAGGACGCTGAAATGTGCAAGTGTACAGACTAGCAGAAAATAA a score=747 s mm7.chr19_random 1371585 69 + 2598976 aaccttgtctcaaaagaaacaaGGGGGAAACCTGCCTCAAAAAGGAAATGGGGGGTGGGGgaagagaag s bosTau2.chr29 32051443 43 + 45822729 ATCCTCCGCTCAAAAGTGA--------------GCCTTAAGGAGGAGAC------------AAGAGAAG a score=88642 s mm7.chr19_random 1372034 2203 + 2598976 GAGTAAACTGTTCAGGCCCCACCTTCGCGAACGCACAAGCCGCCACAGAAAAGAAAACCCCTGCGCGCCTAGCCCCTAGCGCGGCTGGCCGGACGGTGGGTCACTCGGGCCCCTTCCAAAGCCAAGGCCACTT--CCAGCCCGGCGATCCAGTCACAGGTCTCAAGAGCACCGTTACGGCTGCAGGTAAGCCTCTGCGGTAGACTCTGCGCCCGATAGCGTCGC---CGCCGCG-------GAACCATGGCTCTTGATTCCGGTTCCGGTCGGTGCCGCGGCCCACACGACCCCAGATGTGGCTCCCCCGCGCCTGCGGACACCGAGTCTCCCTGATCCCGGC-CTCAGCCTCTTCCGCTCAG----------------------GGTACTCACCTCCCACCCGGTACATGTTAGCCGCCATGGCCGTTCCCGCCGCCGCCTCCGGCCACACAAAGAGGTCCCGGAGGCTCGCGGGGGCAAAGCTCAGCTCCAGACGAAGCCCCCAGCGCGTGGCTGACGCTTCGCGGAAGTGTCGATGGGGCCCGAGCAGCCGGCACCTCTGCTCGCTCAGCCGCCGCGGCTCATCACTGCCCGCGC-GACGACGACACTGCTATAGCCTCACG-CCGGGACACCGAGGCCAGCTCCGGTCTACTCGGCTTCTTCCGGAACGAGCTCGATTCCTGCCTGACCGGAGTGAGGTTCCAGCTCCTAGCGTCCTCACCGAGTCCCAGCAGACGTCGTGCGGTGCCAACCGCTGGCAAGGTTTGCCCTGCCCGCGTCCGGGTTCGCCTCCTTCCGGAACACCTTCGGCCGATCCGGAGAACAAGGCCCAGCGCTCGGCTCAGGTCGGAGAGCAAGACCCCGCAGATCGGCCACTTCCGGAAGGAACTCGGCTCCTTTCGCTCAGCCGCGGCCTCGCGCTCGGTTATTTCCGTTGCAGCTCGACCCCGCCCCTGAGGGCGGT--GAGGAGCCGGAATTAACTCTTTGCACTATGGGTCCTAGCAGCTCC-CCGGCAGTGGCGTCGAAAGGCGCGCGCGCGCCCTCACTCTTCTTGAGGTTATTTGCAAGCCGCTTTGCCTGTTATTTGCATATTTGGTCTGAACTCCCTTTTCTCTTCCCGCCCTGCACTTTTTTCTTTCATCCTAACACAACTGGGCCCCTGAGGGGACCCGCCG-----CACAAAAGCACCAGGCAGTTACTTTTTTCTT--TTTATTGCCCCTCACCGAGCAGAGGGTGTCGGAGCT-------GGGTTGCCTGGCTCAGCCAGCAAGTCTGTTGTTATTTTGTGTGCAGTGGGGTGGTTAG-CCCCTCCAGAAAAATGCGCAATTGGGAATGTAT-GAAGTCAAAGAAAAAGCCAGCACAGGAAAAGACTGTCCTTGGTCCTAGGGGTTT----TGGCCAGGGTGGGGCCAGACCACAGTACCAGAGGGACAAGACCATCCAGCATCAATCACACGTCCAGGGAGGAGGCAGGGGACAGAGAGGGCGTTCTAGATGGTGTGGCAGGAGCGGGCCCAGAGCTCCCTGCCCCCAGCACTCGCCACTGAAAGATGCTAGCATCCTTGCCACCTAAGGAGACAAGGTATGAGTCGTCGTGCGTGAACCGGACACTAGTCACATGGCTGCCATGGCCTGAGTACATACGACTTGGCGCCTAGATGAGAGAAAAAAAAAAAAAAAACAACTGGTTGCAGCAATGGCAGGGTACCAAACCTACCCACCTGGGCCCAATGGTCC-CCTGAAGCCTCACCTTGGCTCGAGCACATGGGTACTGAAAGAGGTGTACTTTGCAGAAGTCGTCTGCCACAGCCACCACCCGTTCATTGTGGGAGCGGCAAAGGGAGTTGATGTCTGTCCCATCAGAGCCATCAGGCCACACACCTAACACAACAGGTGGCCTGAGTCAGGCTGCT---------ACCACAACCTAGAGTTGCAGTGTT-----------TCAGGTCTTCAGGTTG-----CCACTGCGCTCCAGACAATCCC---------------------------------AAGGGGCCTCCTAGCCTGGATTTGCCACT---ATGACCCCCACCCCGAGGTGGCACACGCCCAGGATTCTGAGGGCAGAATGGGTTCTTCCTTGTTTCCCCAGCCCTCCTAACGGATTCCA-GATCCTG-------GCTCACCATAGACGTGGAAGCCCAGCACACAGGTATAGGTAGCCCACTCCCGGTCTCTGCTCTCATAGCGGTTCCTCAGCAGTTTGCAGCCTCCAGCCACATCCCCTAGGTGGAAATCGCCTACTCAGCCGTCATTCTTCCCTCA s bosTau2.chr29 32051621 2229 + 45822729 GAGGAAACC-TCCCGGCCGCTCCCCCGTTGGTGGCCAAGCAGTC------------GCCCCGGCCTTTCGCGCCCCCTGCCTGCCCTGTCAGCC------CCTTTGGAACCACTTTCG----CAATCCCGCTTTACGACCCCGGCGGCCCAGACGCTGCCCT-GAGAGTGACGTCG-GGCCGCCCGC-AGCCTCCCCGGGAGTCTTGGAGCCCGGCCGCGTCGCGATCCCCGCGCTCTCGCTCCCCAT-GCTCCCGGTTCCGGTTCCGGTCCGCGCTCTGGACCACGCCGCTCTAGACGCGG-TTCCCCGCGCCGCTGGGAGCCGAGCCTTTCTGACCCCAGCGCCCAACCTCTCCCGCCCCAAGCCCCGAAGCCCCTAACGCCCGGTACTCACCTCCCACTCGGTACATGTTGGCCGCCATGGCCGTTCCCGCCGCCGCCTCCGGCCGCACAAAGGGGTCCGGAAGGCTCCCGAGGGCAGGACTCG-----AAGCGAAGCCCTGAACGCGGGGCCGGCGCTTCGCAGAAGTCTCAGTCGGGCCCGCGCAGCCGGCGCCTCCGCAGCCTCAGCCGTCGCGGCTCATCCCGGCCCGCGCTGTCGCCGCCGCCTCTATAGGCTCACGCCCGGGACGCCGAGACCGGCGCCGGTCCGCTCGGCTTCTTCCGGAACGAGCTCGGATCTCGCCGGACCGGAGGCGGGCTGCAGCTACCCCCGCCCTCGCCGAGTCCCACCAGACGTTGGACTCTGAGGGCCGCCGCGAAGACTTG-CCGGCCCGCCTCGGGGTTCGCCTCCTTCCGGAACACCTTCGGCGGATCCGGAGAACAAGGCCCAGCACTCGGCTCCGGTCGGAGAGCAAGACCGCAAAGCTCGGCTACTTCCGGAAGAAGTTCGGCTCCCTCCGGGCAACCGCGGCCCAGCACTCGGCTATTTCCGTGGCGGCTCGGCCCCGCCTCCGAGGGCGGGGAGAGGAGTTGGGCTTAACTCTCTGCTAGCTGGAGTCTTGCAGCTCCGCCTGCGGCCGCG--GAAAAACTCGTA-GCGCCTTAGAAC--CTCGCAGTTATTTGCAAGAGGCTTCGCCTGTTATTTGCATAAAAAGTCCACCCTCCCTCACCTTTTCC--GCATTCCCCTTTGCCTTCCTCCCCACCCCCATAAAGCCCC-GAGGCGCCCAGCCGCGCCCCACAAAAGGACCGGGAGGCGACTTTGCTTTTGGTTTATTGCCCCTCAGCAGGCAGCGGGAGTCAGGGCCCAGGCTGGGGCTGCCCGGCTCAGCCAGCGGGTCTA----TACAGTGTGTGCAGGGGTGCCGTTCGCCCCCTCCAGGGAAATGCACTTTTGGGAATGTCTCGAAGTCGAGGACAGGGTCG-----------------CCCCGGTCCTGGGGGATTTGGGTGGGTGGGGCAGGGCCACACTGCAGGGCCGGTGGG--------------------TCAGACGTCAAGAGAGGAGGCAGGGGACAGGGAGGGGGTTCGAGAGGGCGTGGTGGGCACCGGCCCCGTGCCCCCAGCGCCCAACACTCGCCACTGGAAGATGCTGGCGTCCTTGCCGCCCAGCGAGATGAGGTGCGAGTCGTCGTGCGTGAACCGGACGCTGGTCACGTGGCTGCCGTGACCACCGTACACGAGGCTCGGCGCCTGGGCCGGAAAGAAGATGGA------------GCTGCAgcggccgcgggaccccgg--ccgcccgccctgccccggaggcccggggggggccTCACCTTGGCGTGCGCGCACGGGTACTGGAAGAGGTGCACTTTGCAGAAGTCGTCGGCAACGGCCACGACGCGCTCGTTGTGGGAGCGGCACAGGGAGTTGATGTCAGTTCCATCCGAGCCATCTGGCCACACGCCTATCACAGCAGCCGGCCTCAGCCCGACCTCCCCGCCCCCACCCGCGGTCCAGAGCTGCACCATTTTCCCCCTAGCTCAGGCAGCCCGGCCACCCACCCACCACGTTCCAGGCAATCCTTCCCAGTCCCGAGGGCCGGTGGGGCGGGGGTGGGGGAGGCCTCTTGGGCTGGATCTGCCAGTTTCTTGACGTCCACCCC----CTACACATGTCCAGCATTCCGAGCCCCAGGCGGGCTGCACCTTGTCCCCCCA-CACTCACGCAAGTTTCCACGGCCCTGTGCCCCTTCTCACCGTAGACATGGAAGCCCAGCACGCAGGTGTAGGTGGCCCACTCCCGGTCTCGGCTCTCATAGCGATTCCTCAGCAGCTTACAGCCTCCAGCCACGTCCCCTGGGGAGAGGGAGCCCACCCAGC--TCAGTTCTCACCCA a score=3301 s mm7.chr19_random 1374944 195 + 2598976 cctggTCCATTTTTCAACTCCCTTGAGTTCTTGTTGGAG-AAGATAGAGTGTGAAACTGTAGCTTACCTACTTACCGGGTTATCCCTATGTCCAATTCCA---ACCTCCATTTCCCTCCACATCAGCCCCTCTGCTTGATGTTCCTCTAC--TACCATCAGCCC-TCCTGACTAGAAACCTCCTGTCGGCACCCACATAATC s bosTau2.chr29 32054058 170 + 45822729 CCTAGTACATTTTTCAACTCTCTTAAGGCCTGGTGGGAATAAAACATGGTGTTAAACTGTG--------------TGTGTGGTTTTTCTGTCCTATTGTGTATAAACACATTT---------TCAGCCCCTCTACTGGGAGCTCCCTCACATTTCCTTCATCCCCTCCCAACCAAGAGCC---------CACACACATAAAT a score=47292 s mm7.chr19_random 1375251 1087 + 2598976 CCCATCTCCCTGCCACTCACAGTAAAGAATCTCATAATCCCCAGAATTGGACATGATGAAATTCCCATCCTTGGACCAGTCAAGGTGAGTGATAAAACTGGAGTGCCCCTGGGGAATAAGAGTCAAGAATTTGACAAGATGGCTACCATTTCCCATCCCCAGGCTAGCCCTTAATGCATCAAACCCCTGTTACTGTGCCCACAGTTAACAAATCCCACCTTCCACCCCAGCATCCTTACCATACATCTGCCAAAGCGGCTGGACTTAGTGCCACAACTGGAAACACTATAGATGTAGATCATGTTGTCATGGGAACCAATAGCCAGGTACAACCCATCTACAAAGAAACTTATTCAGATAAAGAAGAGCCAGAGCAGGACCCAGGTCCAGGGTGGGGGTGGCTCCCACCTGGGCTGTACCGGACAACTGAGAGCTGTTCATTGCCGTCAGTGACATCGGATACAATCTCTCTGGTCTCTGTGTCCAAAACCAACCACCTGAAAGGAAAAGGGAAGGAAGCAAGGAGGCAAGATGTGAGCCTACCCCCAGGGAGGCTCTGAGCAAAGAGTCAG-------CAAGAAGACAGAATATCAGGCTGTGGTGTCTGGAAGGAG-------------------GCTGGGGGATGGGATGAGGCTAAGGGCATAGAAGTGCTGAGGGGCTTCTGATGTCTCCTGAGAAAGAAGTCAGAAACTGCAGACCAGGCCAACCACAGAAACCTTGTGGAGTCAGTCAGCCTGGCACTTCCC--TGTTCGCCCACCCACATCCACCCCTCCCAAGCCCACTGCTTCCCCATCCTGGGCTGCTA------------CCAGACTGAAGAGTATACATGGGGAAGACT-TGGTGACAG------CAGGAGAG---GGGAGGCCTGGGTTACAGAGAAGCACCC---------GAAAGGTGTGGTT-CAACACTTTAGTTAGCCTTGGTCACCTCTTGTCCCTG-TCCCCGTTACCAAGAACCCTTCCTAGACTTCCCTGCTTTTCTTCCTAGGAGGTCTGGCATTCTCTCACCTCCCTGTGTTCAGTCCTACAACCACAACTGCCCCACTTGGGTGGAAGTCAGCACATAAACCCGTCTCCTGGGA-AGAAAAAAAGGTAAATTG s bosTau2.chr29 32054259 1115 + 45822729 CCTCCCCTACTGTCACTCACAGTAAAGGATCTCATAGTCCCCAGAATTGGACATGATGAAGTTCCCATCCTTGGACCAGTCAAGGTGAGTGATGAAGCTGGAGTGACCCTGGG-AGCAAGGGTCAAGAGACTAAAAATGCAGCCACCATTTCCCACCCCCA------CCCC--------CAGAAGGGTATTAGTTTACCTGCTATGGCAATGCCCCACCCTCCACCCCAGCTTCCTCACCACACAGCGGCCAAAACGGCTGGACTTGGCACCATCACTGGAAACGCTATAGATGTAGATCATGTTGTCATGGGAACCGATGGCCAGGTACAACCCATCTACAAAGACAGTCACTCAGAGAGGGAAGGACCAGGGATGAGTCTAGGTCCGGGGTGGAGGTGGCTCCCACCTGGGCTGTACCGGACCACTGATAGCTGCTCATTGCCATCGGTGATGTCAGACACGATCTCTCTGGTCTCTGTATCCAAAACCAGCCACCTGGAAGGGAAGGAAGTGGAAAACAGGTGTGAGGAT----ACCTGTCCCGAGCAGGGTGCGGGTTGGCAAGTCAGAGAGCCTCAGAGACACCAAAAGAAAGGCTATGATACAGACAGGGAGGTTGTCATTGCATTTATATGCTGGTAAGTGGAAAGGGGCTAAGGGCAGATAAAAGCTGAGGGGCTCCTGATACCTGCCGAAAAGGAGTCCAAGGGC-----------CCAAAGACAG-GGCTCTGTGGATTCTGTAAGCTTGTCACTTCCCTGTGTTAGTTTCCCC---TATGCCCCGCCCATCCCCCCTGCTCCTCTATCTGGAGCTGCCACCTCCTCCACTCCCAGAGGAGGGGGAGTGGATGGGGGAGGGTGTGATGACAGCTGCCACAGGAGAGCAAGGGAGACCCAGGCTGCAGGGAAAAGCACTGAGGAGTGGGAGGGTGCAGTTGGGGCTCCTGAACAGGCAGCGATCACAGTCCTCCACTGCCCCCCATTACCAGAAACCCTTCCCATACCTCCTACTTTCCCCTCCCAGGAGTTCTGGCTCCCTCTCACCTCCCTGTGTTCAGTCCTACGGCCACAACTGCCCCACTGGGGTGGAAGTCAGCACAGAGACCAGTCTCCTGGGAGAGGGGAGAAGGTGAATTC a score=14648 s mm7.chr19_random 1376736 511 + 2598976 AAGAAGATGGCTTTCTAATAAGAGAAGTTGGATGT-CACTTTGTCATCTTAGTAACTTTAAAGGATCCTCCCAAGGCAACCAGAGAAAAGGAGGCATGAGAGACCTGGGAT------------------AGAGCCTAGTAAGGGGAAGAAACCGAAA---------------------GCACCTAGCAGTGCTACAGATGAACCAA------------AATGAGGTCT---------GAGGCAGCAGCAACGCCCAGGTGTCAGTCACTCTTACCAGTCTCTACAGAGTTCATATCTGAACAGCCTGTA-------ACCACAGTACAGTCAGTTCTCCCAGACACAGAAGGAAAGGCAGGATTAGGGA----------GTCAGAG----CACGGGTAGCGTGGCAG----ATCAAGGGCAGCTGA---CTCTACCTTTAGGTCCATGCTCCAGGCCAGTGCATGGCCTTCCCCATCCCACAGGCAGAGCTGCCGGTCATGGCCACAGGTGAGGAAGCGATTCTGGGACGGATGTGTACACAGTCCCCAGAGCTCATCAGTGTGGCCCTGCAGTAGAACAGAGTTACCACAGCTCTTCCCC s bosTau2.chr29 32055374 591 + 45822729 AAGAAGATGCCTTTCGAGTGAGGGAACTAAGATGGATACCTTGTCATCTTGATAACAATGGCAAAGCCTCCCC--TCCTTCCGAGGAGGAGAGGCACAGGAGACCTGGGATGGGAGGCAGGCTGCCTCTAGAGCCTAAACAGAGGTGCTACTCAAAACACTTAGCCACCAGAACTGATACCCCTAGCTGTGCGGGAGATTAACCATTAGTTGCCCACTCACGGGGTCTAGGGGTTGGGGGGCGG--ACGGTACTCAGG-GACAGTGGCACC-ATCAGTACAGA-AGAATAAATATTTTAGCAGCCAGTACAGTCATACCAGTGCAAGGTGGCTGCCTTTGGGAGCAAAAGGGAAGCGGATGTTGGGGAAGGAGTGGTGGCCACAGAAGTCACGGTGGGTGTGACAGCGAGATCCGGGGACACAGAGCTCTCTACCTTGAGGTCGATGCTCCAGGCCAGCGCATGGCCCTCCCCGTCCCAGAGGCAGAGCTGCCGGTCATGGCCACAGGTGAGGAAACGGTTCTGGAAGGGATGTGTGCAGAGCTCCCAGAGCTCATCCGTGTGACCCTGGAGCGGAGCACGGCTGTCAT--CTCTGCCCC a score=-1170 s mm7.chr19_random 1377385 155 + 2598976 GCCCTCACAGCTCCAAAGTGTTCTGGAATCTGCGGAGTAATGACAGAATGTCAAAAGCATACTGACCATTCCTCTCCCCATCCCTTCCTAGACCCCAGCGCATCTCTCACCTCTGCCTCCTGGAGGGCCACCAACCCGGGCCCCCACTGCACCAG s bosTau2.chr29 32055965 55 + 45822729 TCCCCCACAGCTC--------------------------------------------------------TTCCCTCCCCG---CTCCCCAAACCCT-----------------------------------------TGGCCCCCCCCAAACCTG a score=41523 s mm7.chr19_random 1377552 981 + 2598976 CCCACCACCACTCAGCACTGTCCCATCCCGGCGGAGACACAGGGCAAAGATGGACCCCTCGTGAGCATGGGCCTGGGCCACGATCGTGTAGGTCTCTGTTGGTAAAGGCTAGGTAAGTCATGCTCTTAGAG----------------AAAGGAGCAGCTTAGAGCATCACAACACAG-ACTAACTCT-AGCTCCCAAGCACCCACAGAAGACT--CTTTAAGCCTCATCATGACTACCAATTCAGCTCATAGTAATAGTGGCAAAAAAAAAAAAAAAAAAGGC----CCTTTGAACTTTGAACT----TTGAACCTGAGATTTAACAAATTC-AAATCCCTAGCCTTCTCTCCTTTACTGTGTGGCTCCCCACCTTTCTAGAC-----------AAAGCCCCAC--------GGAGTTCATCAGTTCTCCAGGGTAAAA----GGAAACGCTCTGCTCTGTTCCCACAGAATTTCTGAGATACAAACATCCTAA-ATGCTAGCCCTA--ACCACATACCTTTGGCCCCACCCCTGCCTGGGGTCTTGGAATCTGAGACACTTCGACCCCAGGTAAGAATGTTCCCCTCGGAATCTCCAGTGAGGATGTCTCCATCAGGAAGGAAGACAAAGCAAGGGATGAACTTGGGTTTCTTGTATTTCTGGAGAGG------GCAGAGGACAGGTGTCACAGGACAGATGTGGATGCTGGGGCACATTAGAATCAACACATGTCACAGGATAGCTGGGGTGCTGGGGTGCATTAGAGTCTACAGCACTTAGCCCCA--CTTCCCTCTCCAC--TGCCT--------------CACCCATCCACACCTCACCCCAAAAACACCCTGCTTCCGGGCGAGGAGCCCATTCCCGGGAGCCCCTGTCCCACCGCTCCAGTTCCAAAAGTGGACATGCGATTTCCCACTGGTGACAATACAGCTGCTGTCACGAGGGCTGAAGCCAACAGCGAGGACTGAGTCATTTGTACTCTGAAAAAAAGAAGACACTTGATTCAGCCAATCTAAGTCCTAAGCCTGCCTTCctccctcc s bosTau2.chr29 32056070 1028 + 45822729 NNCACCACCACTCAGCACAGTCCCGTCCCGCCGGAGACACAGGGCGAAGATGGAACCTTCATGAGCGTGGGCCTGGGCCACAATCCCATAGGTCTCTGTTGGCAAAGTCCAGGTG-GTCATGCTTGTAGGGTGCAGGGAAGGAGGGAACAAGAGCAGCCTAGGCGGTCACAATACAGTAATAACTCCCAGTTGCTGAGTGCCCGCTGAATGCTGTCTCTGATCCTTGGCTCttctccc----caatttacagactgaacaaccaaggttcaaagaagtgaggtaacttcctaaaggccagaactagaggtgagcccagaacctggcagactccaaagccccagcctcctc-cctttgccatgctgcccACCACCCTTCTATTCTGGCTGCCTAGAGAGCCCCACCCTCTGACAGAACCCATCAACTCCCCAGGTAAAAGAATGGGAAATCCTCTCCTCTGTCTTCACAGACCCTCTGGGGAACTAGCCTTCCAGGATGCCACCCCCATCACATCGTACCTTTGGCCCCACCCCTTCCTGGGGTCCTGGAATCTGAGAGGCTCCGCCCCCAGGTGAGGATGTTCCCCTCTGAGTCCCCAGTGAGAATGTCTCCATCGGGGAGGAACACAAAGCAGGGGATAAACTTGGGCTTCTTGTATTTCTAGGGGCGAGGCAAGCAGAGAGCAGAGGTCAAAGGGTAG-------------GGCAAAG-------ACTACAAGTTAAGGGGCCACTGGGA-GTTGGGTAGCATTAGGGTCTATAGTACTCAGACCAATGCTTTCATCTGCACCCTGCCTTCCCCCGCATCCCGCACCCATCCACGCCTCACCCCAAAGACACCCTGTTTCCTTGTGAGGGTCCCGTTCCCAGGAACCCCTGTTCCACCATTCCAGTTCCAGAAGTGGACGTGGGATTTCCCACTGGTGACGATGCTGCTGCTGTCACGAGGGTTGAAGCCAACGGCGAGGACTGAGTCATTTGTACTCTG---AAGGGAAGATACTAGATTCAGCCACCCCAAGCCCT--GTATACCTTCATTCTACC a score=61219 s mm7.chr19_random 1379381 2232 + 2598976 CCTAACAGCTGGTCTACAAAAGCCCGGAGACCTCAAGATAATTCTTCCTTCAAGGCTCTGGT----TGAAAGCTGAAGGTATAGAGCAAATGGTAGAATGCCTACTGACATATTAAAGGCCCTGGTTTGACCCTCAACACTGCAGGGGGGGGGAGCTGATCCCCTAAATAATTATAGTCCCC------GTTAGAACTCCTGTAGTTCCCAATGCACAGATGGAGAAACAAAAGCTGAGAGAACTG-------AGAGTTTGTCTGAGTCGGAAGTGTATGTATAAGTAAACCTGGAACTGTCTGTATTCCACCACTCCCACCCTACCCCAGATCCAGAAACCATCAAGCCACCTAGGTTCCTCACCTTAATCTCAGCCAGCTTCACTCCCCGGCTACAGTCCCACACTGACAGCATGTGCTCATTGGAATCATCCACCACACACAGAAAAGCACCTTGATCCTGAGGACGA--GACACAGCATGTGAAGCCGGGACGTCTGTACATGCCTGCTATGAGACAGGGATCTATCACAGGTTGGGAGGGTCTCTTTCTCAGGAGAACTGGCTGTGTGAGCCCAGAACACTAGACCTTCCCCAGGCTTCCTGGTAAAATCAAAGAGTGGTGTCCTGAGCAAGAATAAGGGTCTagccagatatggtggcacgtgcctataacaattggtgggcagagacagaaggagcaagagttcaaaaacatcctcatctacatattgagttacagaggccagccgaaggtacatgagaccctgcctca-aaaacaaaCagtcggatgtggtggcgcacatctttaatcccagcacttgggaggcagaggcaggcggatttctgagttccaggccagcctggtccacagagagttccaggacagccagggctgcacagagaaaccctgtctcgaaaaaacaaaaCAAAAcaaagccaacctggtctacaaactgagccccaggacagctaaggctacacatagaggaaccctgtcccaaaaaacaaaaCAACAACAAACAAACAAACAAGATCG--GAAGCTTTGTGCTCAGCTCACCGCTGCTGAAAAGGCCAAGGCCCCCACACCTCGCTCAAAGGCACCCAGTCCAATCTCCTGCAGTTTTAGGAGTGTCTCTGAGTCCCAGATATGAACCACGGGCTGCAGGGGCTAGTGGAAGAGAAGGGGTCAGAACCGGGAAGAAAAGCTGACCTGTTATCTCATCCTATCTGCTCGATATTCTGCT-TGACATTACCTTTCCATCCTTGTCCACTCCAGCTGTCTGTCCTGAGGCTACACGAACACCATCAGGGTGAACAGCAAGGCTAAGGAAGGGGAAGAGA-ACTATAGGAAAGGGGTC---TCTCTCAAGACCACCCAAGA--------------------AGCAGCAAGGCAGCTGTCTTTGCTACCCTTCCCCCCGTAGAC---AGACCCTCTTCCTGTCAAGCCCACCAGCCCCA----------------------GACCCCAAGACCCTCACCATCGAACGCAGTCTGTGTGACCCCGGTAATGTCTCTGGCCGCCACCTCCAGGACCCCCTGGGCCTCCCCCAGGCCGGTACAGCACCACTACACAGGCAATAAAGTAGACCACCTCCCCAGAGCGCAGCACAAATAGATTAGAGCGAGAATCACGACCCCTGTACCCATAACTGTGTTGAGGGGCATGGTCAAGGAAAGGGCCAGATGAAGGACAGGAAGAGGAAGAAGGGAACATGAAAACGGCAAAGCTCCCACTTGGCATCACCATCCACATTAGGGTGGTATGGGATA-ATTCACAGGATTCCTTGTCCACCCCCACACAGAAAGAAACTGTAAAGAAGGAAAG--------GGACCCATTGTGGGCAGGGGTGATTCCCACGGAACTGAA-----TAGGATACACCCAGTCGAGGCTCAGGGTCTCTGGGGGCGGGCCGCTGGGCAGCTCCTCAAGACTTCGGATGCCAGACGGAATGTACATGGTGATGGGACGGCCACGAAGGAACATCTTCACTGAAATGCCTTCTACAGGAAAAAGCAGGGAAATA----------------AGCCTCCCTCCT--GAAGGCCAGAGCAGCAAAC---CCACCGTACCTGA----------------------------------CTAATTCCATCATGCGAGTTCTTCCCTCCACTTCTCTGTTACATACCTAAGTTATAATTGCTCCTCCGAGATCCGGGACCCCCAGGACTGGACAGAGGGTCTTTGTTCCCCCGGCTATTGAGAAGAGGTAAAAGTATA-AGACCAGGATCAAGTGTCAAGACCTGAGAGAAGTGGGGACAAGATAC-TGACAGGag s bosTau2.chr29 32057118 1890 + 45822729 CCTGACAACTGGTCTACTGAGGGCCAGAACCCTCAGGACAACCCTTCCTCCAaggccctggtcccctaagagc---------------------------------------------gccactctctgtcactc-------------------gctaatgccttacacgtt----gtccctcatgaggtcagaatgtctgtggtccccactttacagcctcagaga----ggctaggaggcttgctccaggggacttagccagaaggGAGATTTCGTGTTTGGG-AAGTTTGGAGGTCTCTGCACCCAACC----CTGCCCGGCGCC-----------CCGCCAGGCCCCCTGAACACCTCACCTTGATCTCAGCCAGCTTCGTGCCCCGGCTGCAGTCCCACACCGACAGCATGTGCTCGTTGGAATCATCCACCACACAGAGGAAAGCGCCCTGATCCTGAGGCCAGAGGACACACCA----------------------------------------------------------GAGGG--------------------GCTGAGTGAG---------------------------GCCTGGCAG--TCAGGGGGT-----------------TCAGGGTCTAA----ATGAGGCGAGGGGCGC-TATGACA-------GGCTGAGAGAGCAGAAG-----------------------------------------GGGCCA------------------CGTGTCTCTTAGGAGAACCAGTTGGG------------------------CAGGGCTTGGGAAG--------------------------------------------------GCCAGGACCTCTGAGGCTTCCTGGTGAAG-----------------------------------------------------------------------TACAAGAAGGGGGTTCC-----------------------CAGACAAGGAAATGAGGGCCTCGAGGCACCAGGGCCAGCTCACCACAACTGAAAAGGCCAGGGCCCCCACACCCCGCTCGAAGGCCCCCAGTCCGATCTCCTGCAGCTTCAGCAGCGTCTCGGAGTCCCAGACGTGAACCACAGGCTGCAGGGGCTGGTGGAGGAGAAGGAGTCAGGGGTGTGAAGGAGGGCCGGGCCGGGATCTCACCCT--------GGTGTTTGACTGTGGCCTTACCTTTCCATCTTTATCCACGCCGGCTGTCTGTCCTGAGGCTACACGCACACCATCAGGGTGAACAGCCAGGCTAAGTG-GGGGAGGAGACACTCTAGGGAAGGGGGTCGGTCTCTCAAGACCACCCAGGACACCGTCCCTGGGCCTGCAGAGCAGCAAGTCCACTCTCCTCTCC-TGCTTCTCCACATCCACCCAAGACCCTCTTTCTGCCAAGCCCACTCTCCCCACGCCTTGAGCTGCCCACTCCCCAGCCCTCGGACCCTCACCATCGAACACAGTCCGTGTGCCCCCGGTAATGTCTCTGGCCACCACCTCCAGGGCCCCCAGGGCCTCCCCCAGGCCGGTACAGCACCACCACACAGGCGATAAAGTAGACCACCTCCCCAGAGCGCAGCACAAACAGATTAGAGCGGGAGTCACGACCCCGGTACCCATACCTGGAGTGGGGATCATGGTCAAGGAAAGGGTTGGATCAAGGGCACAGTGAGGAAAAGAG------GAGAAAGACAGAGCTCCAGC-CAGCAGCGCCAC-----------TGGCAGAGGATAGATGGGGAGGTCCCCCTCTCCTTGCAGACCCAGGAGGAAATCGTAAAAAAGCAGGGGGTGGGGAGGGTTCATGATGGG-AAGGGTGGTTGCCAGGGGGTTGAAGGGAGCAGGATACACCCAGTCAAGGCTGAGGGTCTCCGGGGGTGGGCCGCTGGGCAGCTCCTCCAGGCTGCGGATGCCAGACGGGATGTACATGGTAATGGGGCGGCCTCGGAGGAACATCTTCACTGAGATGCCTTCTACAGTGAAAA-CAAGCAGGTGTCAACCACCGTCCTGCAGCTTCCCTTCTAGGAAAGTCAGGGCAGAGCTCCGACCACCATACCTCACAGCTCCCCCCCAACAGTTCCTGGGGCTGTAGCCCCAACCCCATCATCCAAGTTCTTCCAG--ATCTCTCTG-GACATACCTAAATTGTAATTGCTCCTCCGAGAGCCAGGACCGCCGGGGCTGGAGAGGGGGTCTTTTCCCCCACGGCTGTTGGGCAGAGAGAAAAGCACAGGGACTGCAGTCAGGTCCCAAGACAGAACTGAGGAGGGG-CAGGACACAAGAAAGGAG a score=8059 s mm7.chr19_random 1382081 226 + 2598976 CTTTCTTCTAGGCC------------TCTACTGACCTTTTTATTTCCATATTTGTAAAATGAGGTCA-----------GAATATATACCAACCTGCCTTTCAGGAATCTGGAAGGTAGGCAAAA---------TCTCCCAAAAGGAAAGTGACAATTGAATTCCAGAGGTCACTATCACT---GGATGATAAGCTAACAATAGCTCTTCAGAGAACATAGTAGAAGGTGAGAAAGGACAAGGCTGGAGTAGACCTTCAGGT s bosTau2.chr29 32059157 257 + 45822729 CTTTCTTCCAGACCACCAGGCCTCTGCCTATCAACCTTTTCATTTCTCCATCTGTAAAATGGGCCCATAGTGACTCTAGAAGGTCCACAGCCGTGCCTCTTGGGGATCTGAGAGGTCAGCAGGAAAGTCCTTATCTCTCAAGGGGAAAGTGAAAGGGGAATTCCAGAGATCACTGTCGTTAGAGGATAATAAGCTGACAACCTCTCTTCCGAGAATAAAAGAGAGGCC----AAGGATAGGGTGAGAATAAACACTCAGGT a score=98793 s mm7.chr19_random 1382895 2306 + 2598976 CATCAGAGCTTTTAG------CTCCTAGAATTTTGGAAGGTATGTTGTGGTATGAAAATGTCAGCAG----AACCAgaatcaggaaaaatcgggtccagagcttgactct------gtgacctgaggcaactgact-gccctctctgagcctgcttc---acctgtgcaacagaaaacatgagagaccacctagtcaccaaagatgttacagggcctgaatgacatggaggagagctg-----cagcacagggccccaaacattgcaggagtcccaaggaatgctttgttTCTTTCTTCCTGTTGGGTAATGAGGTCACCTACCCCACCC---------------AGGAATGGAGAAAGTCAAGAAGCTAAGCCTGGGATACAGCAAGTTAAAGGAGG-------AAGGTGAGGCTTACCCACCTCTCTGTGCTCCCTGACCGCAATAGCAGGTTAGCTGAGGAAGCTGCCTTCCTGGAGAGTTTCTGCCTGGGCCGCTCTGAGGGGGAGGAGGAGGAGGAAGAATTTCTTCGGGGCCTGG-TGGGACAGAATGAAAAAGTGAAAAATCAAGCCTGTTTCTCAGATTTCCC-ATCCATCCT--------AGCTACCACCACAGGATACCTACGTGTCAGAACGCTGAAGAGGCTGCACCGGCCTGAGGATTCCTGGGGGGCCAGGGGAGCCTGCCCCACTGCTGCTGCTGCACCCTCCTTCAGACTGGGTCCCACTAGGTTCTTCACTGCCCCCCTGAAGAGCTGGAGGACCATTGCTCAGGCCAGGGGGTCCAGAGGATGGAACAATCTCCAATTCTTCTTCCGTTTGGGTGCCTCTGGTCACCAAGGAAGGGCTGCATGTAGGTGGCAGTCCTGGAGGGACTGTGATGCTGCTGAGGAGACAGCAAATTAACCTGATG-CCCCAAAGTTCCCA------GGAAGGCAGAATGAGTGTGCTAGCATATATACCTGTTCCTTGTCGGGGCTGATATGCCAGAGCCCTGCAGGGTTGTGGTGGAGCCATGCAGCCGCAGCAGGCGAAGGGCTTCTGCTAAAGCCGCTTTTACCAGTTCCATCTCTTCTTCCTGCACCCGAAGTCGCTGGCTCAGGGTCTGCAGGGTCTCATGAGCAGGGCCCTCACCTGGGAAAGGGGCAAGAAGCACTCAGAAAAGTGCCACTACCTG---------------GAGGGCAGAGCT----GGTTTTGTCCTCCCACCCAATGTTACAATGCAACCATTCAATAGAGCTAACCCTTTCGAGTAGTCTAAAACTCGAAAGCTCATCCAGCGGCGAGGAGGTGGACAGAGATGGTAGGGGGCCAAAGTGCCTCCTCCTAGCAGGACAGGCAATGAGCCTGGCAAAA--CTCTTCCTGCTGC-TGTCTCAGCCTCCACAGAGACAA--AGTATTATGGAATACCAGGGGGGGGGGAAACATGGAATACTGCCGAGGTACGTGGGAGCCAGAGA--GAGACACAGGAGCAATACTGGTGTGGAACCGCACGCAGCCCTCTCACCCCACCAGCAAGCGCAAGTCTCTACAAATGCAAACACAGCCAACAAGCTAGAGA-CAC----AGGAAAGTGAACTGGAC----AGTAAAGTCAGACTGAGAGGCCGGGGTGTAAGGCACACAATCCGG--TGACTGTACAGCAT-ATCAGTGGAGAGC---TGTTACAGTGTACATCCCAAGGTAAGGGTAGAAGTCCGAAATAAGAAGACCCGGAATTCCCGGGGAAGAGGCCCAGTGTGACACAGT-GGTCAGGGAAACTCAGAGGGGCACAGGGAAC--CAAGGAGTAGAATGGCATTAAGGAAGTCCAAAATGACTGTAGCGGGTTCCTAGGAACTAGAATTGGACGACCTGAAGAACTGAGGAGGATGCTCAGAGCCCCCGAGGCGCAGGAGCACGCGAGCACGCCACTAGACAGCGGTCCAGCACTAGCAGTGCCCGTCCGGCTGGCGCTCAGGGAATCCAGGCCACGCCGGCCGCCCCGCCCCGTACTCACCGGGCCCCGCAGCCCCGTCCATCCGGCCCCCGCGTTGCTCCGAGCAGCGTCGTCGGAGG------CGTCTAAGCCGCGGGGGCCATGGCTAGGGAGAGGG--GAAGGAAGCACTC--GAGCGCGCGCGGAGGGGAGCCGTGCCACCCCTC-GGGGGCGCTGACGAGCGTGGGGGTCAGGAGTTAGAGGGGGGCGCTGTGGAA--------------------------CCGGTTCTTTTACTCTCTCGGGGT-----TAGGCTCCCGGGG-TGCGGTGACGGG-CCGTCCGGAGCCCCTGCGCTGCAGCACAAACAGGCGCGGGACACGGAGTCGCCAGCAAGCGCGGGA-GGGAggcgggccggaggggggggg-cgggccgccAGGTAACCCTTCCCTGTCCGGGACCCGAGGCTCAGGCCGG s bosTau2.chr29 32059534 2394 + 45822729 CATGAATACTTTTGGAAAACCCTCTTGGGAACTTGaaagggatgctgtgatatggtggagagggcaggggcaactggagtcaggaagagtttggttgaaatcctggctctagctgtgtgatcccaggcaaatgacttaccctctctgagcctgcttcctcacctggccaatgaacagcatgaga--ccacctaccccccaaggatgtcgtggggactgaatgagatggaggaggtcgaggggttggcacagtgctgggtacacagcaggcgcccca-ggagcgctt-gttcctttcttCCTGTTGGGCAATGAGGCCCCCCACCCCACCCCAGGGAAGCCAGGTGAGGGATGTGGAAAGTCAAGAACCTGAGCCTGGGGTG-AGGGGGTTGGGGGCGGGGCGGGCAGGGGGAGCCTCGCCCACCTCTCTGTGCTCCCTGACCGCAATAACAGGTTGGCCGAGGAAGCTGCCTTCCGGGAGAGTTTCTGGCGAGGCCGCTCTGAGGGTGATGAGGAGGA---AGAATTTCTCCGTGGCCTGGGCAGAGCACAGTGAGCAGGTGAACG-TCATTCCTGCCGCTGGGGCTCCCCTATCCGCCCTCCCCTCCCAGCCTCGACCACAGGAGACTTACGTGTCAGTGCGCTGCGGGGGCTGAGCCAGCCTGAGGATCCCTGGGGGGCCAGGGGAGCCCGTGCCACTGCTGCTGCTGCCCCCTCCTTCAGACTGGGTCCCGCTAGGTTCTTCACTGCCCCCCGGAGGGGCTGGGGGCCCGTTGCTCAGCCCAGGGGGGCCAGGGGATGGTTCCACCTCCATCTCTGCTTCCGTCTGGGTGCCTCGGCTCACCAAGGAGGGGCTGCACGTGGGTGGCAGTCCTGGGGGCGCTGCGGGGCTGATGGGGAGACAGTGCATCAACCTGATGGCCCTAGAGGCCCCATCGAGGAGGAGGAGGAGGGAGTGACC--ACATGCATACCTGTCCCTTGGAGGGCCCAGGGTGCCAGGGTCCTGCAGGGAGGTGGAGGGTGCCTGCAGCCGCAGCAGGCGAAGAGCTTCTGCCAAGGCTGCCTTCACCAGCTCCATCTCCTTCTCCTGCACCTGAAGCCGCCGGCTCAAGGACTGCAGGGCCTCCTGAGCCGGGCCCTCACCTGGGAAAGGGGCAAGAAGCCGTCAGCATGTCACCCCCCCCCGCCCCCGACACACACCTGGGGAAAGGCTTGAGGGGATTCTCTCTCCCCCTAACTTT-----GCATCTGTCCAATAGGACTGCCCACTCCAAGCAACTCCAGGCTTGGAAGCGCTCCCAGAGGGGAGGAGACGG-------TGGGAAAAGGATCAAGGGCCTCCTTCTGGCAGGGCAGGCGAGGAACCTGGCAGAGGTCCCTTCCTGCTGCCTGTCCCAGCCTCCGCAAAGACAGTGAGTACCATGGAGTACCAGGGGGG----AAATATGGAGTTCTGCCGAGGAACGTGGGAACCACAGACGGAGGCGCATGAGGGACGACAGGG-------------------CCCAGCCCAGAGTAAACCGTAGGACTCCA-----GGGAAGGCAGAGAAACTGCGAGGGAGCACCAGGAGAGAAGTGGG--GGACTCAGAGGACAGTCATCCTGAGGACTCAG-----AAGAGAAGAGGTCCGGAGTGACAGGAGAGGGTTAGCAGCGGAGAGCAGAGGTCCCAGCGCAGGTTCCAGGGTAACAGAGGAGGTCAGGAGTAAAAAGACCCACCAAAGTAGGGAAAGAAGCCCAGGGTAACACAGGAGGTTCGGAAACTTTGGAGGGGCCCAGAGTAATACGGGGGGCAGGATGGCATTGTCGAAGTCCGAAATGACAGTTGGAGGACCCAAGTAACTAGGGG-GAGCGGCCTGA-GAACAGTGAAGGATGCTCGGAGCCCCCGGGGGCAAGGAGCACGCGGGGACGCC-CGGGACAGCCGTCGGGCAATGGCAGCGCCAGACTGGCCGGCGCTCCGGGAA---GGGGCACGCCGCCCGCCCCGCCCCGTACTCACCGGGCCCCCCGGCCCCGTCCATCCGGCCCCCGGCTTGCTCCGAGCGGCGGCGGCGGAGGAGGAGGCGTCTAAGCCGCGGGGGCCATGGCAAGGGAGAGGGGAAGGGGAAGCACCCCGGGGCGCGCGCGCGAGGGAGCCGAGCCACCCCCCCGGGGGCGCTGTCGTGCGCGGG--CAAAGGGCCTGGAGGGGGCGCTGTGGGGAGGGGGCCGCAGGCTCTGGGGCTCGCCGGGGCCTCGGACTCTCCCCGGGCCGCTCTCGGCTCCCGGGGGTGGGGTGGCGGGGCCGTCCCGGGCCCCAACGCCGCAGCACAAACAGGCCCCGGACGCGGAGCCGCCAGGAAGCGCGGGAGGGGGGGCGGGACGAGGAGGGGGGGCCGGGCCGCCTGGTAACCCCTCCCTGTCCGGGCCTGGCGGCTCGGTACGG a score=168209 s mm7.chr19_random 1385668 3712 + 2598976 TCCTCTCCTGGCTGCTGGCATTGGTCGGTGGCCTCACCCTCCTTTGTAGCGGGCACCTTCTGGTACAGCTGGGGCACCTTGGCACCTTCCTGGCACCCTCTTGTTCATTCCCTGCTCTGCCCC-AGACTGCCCTGGCAGCGGGAACGGTGGCTCTAGGCACAGGGCTAGGAGGCGCAGGAGCCAGCCGGGCAAGTCTGGATGCAGCTCAATACCCCCCCTGGAGAGGGGTCTTGACTCCACTGCTAGCGGTTGGCACAGCTGCAGGTGGGGGGCTGCTGACCCTTGCCCTGGGGCTAGCCCTGGCTTTGCCAGTAAGTCTCAACCAGGGACTGGAGGAGGGCCTGGAGGCTGCCTTGGCTCACTACAAGGACACAGAGGTGCCTGGACGCTGTCAGGCCAAACGTCTGATGGATGAGTTGCAGTTGAGGTACCATTGCTGCGGGCGCCATGGCTACAAGGATTGGTTTGGTGTTCAGTGGGTCAGCAACCGTTACTTGGACCCCAGTGACCAAGATGTAGTTGAGTAAGTGACTGATTTGCTTCTTTTGTCTTCCTCTTCCTCCTTAGC----CTTGAGATTC----TTACCTGGACgtgcgataaatagagcacggtggctgagaggctgggtta-taattctatttatcagcccagggcatgttgctaaaccgctgtgggcccattcctcatctgtaaaatggagataactatgcccgtctttatcttccagacagactcctatcttacagagttgtggagataa--------atgaattatgcaagcttga-atagtgaagaactcagtaaatgttgtataatcattG-----TTCTCAACTGCCCCTGCTCTCAGATGCTCCTC---------TCTGCCGCC-----TCATGACTATCTTGTCTATGCCTTTGCAGCCGGATCCAGAGCAATGTGGAAGGCTTATATCTGATTGATGGCGTCCCCTTCTCCTGTTGTAATCCCCACTCACCCCGGCCTTGCCTGCAAAGCCAACTCTCGGACCCCTATGCCCATCCACTCTTCGATCCTCGGCAGCCCAACCTAAACCTCTGGGCCCAAGGGTGCCATGAAGTGCTGCTGGAACACCTGCAGGGTTTATCAGGCACACTGGGAAGTATTCTGGCTGTCACCTTATTGCTGCAGGTTAGTCAGCTAAGGGCCCTGACTCCTACT-------TTCAGCTCTGTGACCCC-AAACCCACTGAC----AATCACCCTTTGCA-CTTGCTTCCCCCCACAGATTCTAGTGCTCCTTGGTTTGCGGTATTTGCAGACAGCGCTGGAGGGCCTTGGAGGAGTCATTGATGGGGAAGGAGAGGCCCAGGGCTATCTTTTTCCTGGTGGGCTGAAAGACATACTGAAAACTGCATGGCTACAGGGAGGGCTTGCCCACAAGCCAGCACCTGAGGAGGCCCCACCAGATGAAGAACCTCCCAAGGAAGTTCTAGCTGAGGCCTAGAAACCTGAAGAGG---TGGGGGTGGG---AAGGGGAAAGATGGACAAATGTGGAAAACTTACAATTCGTTACTCAGACTC------AGGGAAGGAAAGGTCCCTGGGGTTATAGGAGTTAAGAGCAAGCGG--AGCTGGGCTGGAAT----GAGAAGTCCAGGTGTCCTGGAACCCAGCTGTCTCGTTGGAAACCACCAAGGTTGAGAACAG-------ATGAGGGCGACAGGGAAGTGACAACCAAAGGACTAGAGAATGTTTCTAGCATCCAGATTCTACAATAAAGTTTGTGGACAGAAATCACTGTtctcccgctctcttcctctctctgtctctgtctctctctctTGGCTGGGAG--CCTGAAAGA-------CTCTGCAGAGGAGGAACCCAG----------------CCTATGTAAGAA-------CATGTACCTGATCTCTTGGGTAGGTCTGCCAAATGAAGGAAACCATGAAGCCCCTCCGGGTTGAGATTCTTTATTCTAGAGGTAGGAAGGGGAT----CGCATGCTCAGGTGGGGAGGGTCCAGCCCAGCTCCTCTAGCCCCCC-ACTGCATGCTTGTCCCCAATAAGTTACCCTTTTCCCACAGCTACCCTCCTTTCTGAGTCCATCTGTC--CTGCTCCGCCCCAGATGGGGCTGATCTGGCTCACTAGAGAAGCTGCTTGTCCCCAACATGTGGGCAGTGCCACATGGCAGGCTGGGGGAAGGGAGGGAAGCAACTGGGACACACCCTGTGGTTGGAGGGGCTGCCTCTGGTTCTCAGGGGTCAGGTCTTTAAAAAAAAAACCACATCCTGGGCTGGCCTGGAGCCCAGTCCCACAAGGTATGTGCCTAAAATAAGGTAGAAGTCAGGGTGAGGTTGCCATCACACCTCAATGGCTGGGTCTGAGCCCTGGCCCTGCCGTTGTAGCTGCTCCTCCTGCTTCATCTTAGGTTTCTCTGTCCGGGTGTGCCATACCAGTACCTGTGAAGGAGAGTTT-----AGGGTCAGGACCAGCCATAACCAGGGCTCTGGGGTGTTAAGATCTAAAATGGATTCCACCCCACCCCACCTCTTCTACATTCA--GTGTTGGTATACAATGTATAAAATATTGGGGTGGGAGAA--CTTTACTGCCTCTAAAA---------------------------------------------------------------------------------------TGGAGCTG-----TGTTCCTT--------------------------------------GTCTCTCTGATATATACATGGGTTCATATTAGTCTG-----TAAGA--------------TGAAATGG----------------------------CAGGGGCTCTA----------------CTCTGACTCTCAGTAGCCTTTTTAATAGAGTGAAAGCAAAGTTGGTCAAGCTCTGGAGGGTTTCTCGTGGTTCAAACACCCATTCCCAGTTCAGTT----AG-------------------------CTGCTCAACCCAGA-------------GCCTTTCTCCATCCTCTTACCTGAGTACAATTGGCAGCCCGTGGCTCCAGGTCCTTGGGATCTACAAGGTGGCTCAGGAGACTACTTTCCAGGTGGCCCCGGGGTGCAGTAGCATCAAACTGGGCATTGGGCTTAGCCAATAGCAAGGGCAGGGCAACCGCAAATCCCGCCATGTCCAAGGGAAAGGGCCTGTTGGGTTCCCATGCTGTGTGGAAACCCACAACGCGGCCATCCTGTACCTGAGGACCTTCAAATCGCAGGCCACCCACCAGCCCCACAGGCCACACTGAGACACCGCGAGTCCAACGCATCTGATGGAGATGAGAGAAGAAACAGAGAGGGGTGGTCCAA-----------GAAAAAGAACTACTTTGTTTATTGACCCCCTGCCCCTAGTGCTCCCCATCTTCACCAGCAGCCCACATCAACACGGGTAAGCAAGAGAAAGAGG-GGAGCTGGTCCCACCTGGC-TCTTTCTCTGTCTTTAATCTCAGGGCTCACCTCCTTAAAGAGCTCCCGGCTGTAGGTGTTGTCATCGTCAGCAAAATACACGACTCCTTGGGTCCCTGGTGGCGGTGGATCCTTCTCCCCCCCAACAGCACCCCCTTTTCCTCGGAGCCAGTCGAGGGCCTTATTGCGCTGTTCCACTCCTCGGGGCCGGACCCAGCCTGGCTCACCTTCCCTAAGCCGTTGAGCCTTGGGGGTAAGGACAGCCAGGTGTGTAAAGAGGAGACCAGAGGCGGCCAACAGCCCCGAGACCAGCGGGGTAGGGCTCTCAGCGTCCTCCACTAGCAGCCAGTGTAGACGGGGCACCAAGCTCAGGGTCTGGGACAGCCGAACCAGCTCTGCCTTTTGTACCAGCCTGCAGAGGGAGAGATGCAGGAAGGAAGGGGCCAGGTAACCTTGGCCCTCTACACTTAGAATG-ACAGCTGCTCCT-GGTCACTGTTAGCATCTTCTCTGGCATTTCTCCTACCGGTGCCCAAGCTGTGTGTGTATGTGTTACTT s bosTau2.chr29 32061978 3880 + 45822729 TTCTCTCCTGGCTGCTCGTGCTGGTCGGTGGCCTCACCCTCCTCTGTAGCGGGCACCTCCTGGTCCAGCTGTGGCACCTTGGTACCTTCTTGGCTCCCTCTTGCCCGTTCTCTGCCCTGCCCCCAGGTTGCCTTGGCGGCCAGTGCAGTGGCTCTGGGCACAGGACTGGTGGGTTCAGGAGCTAGCCGGGCCAGTCTGGATGCAGAACAATACCCTCCCTGGCGAGGGGTCCTAGGCCCGCTGCTGGTGGCTGGCACAGCGGGGGGCGGGGGTCTCCTGGTCCTTGCCCTGGGACTAGCCCTGGCTTTACCTGGGACTCTGGACACGGGCCTGGAGGAGGGCCTGGGGTCTGCCTTGGTTCACTACAAGGACACAGAGGTGCCCGGACGCTGTCAAGCCAAACGGCTGTTGGATGAGTTGCAGCTGAGGCACCACTGCTGTGGCCGTCATGGCTACAAGGATTGGTTTGGAATCCAGTGGGTCAGCAACCGTTACCTGGATCCCAATGACCCCGACGTGGTTGAGTGAGTGA----TTTGCTTCTCCCCTCCTTCTTCTCTTCCTTCTCTTTCCTTGAAACCCCCCCTCACCCAGATAGGCAGTAATTCA--TATAGTGAATGAGGGAATGGGACAACagctgtgt-----gacccagggcatggtaccaaactgctctgggcccatgt---gtctgtaaactggagatgat-----------------------aaaactaccatctcacagagttgttgtaacgattacaacagtgaattatgcctgcctggcatagtaaagcagttggtaaatgttTCCC--TCGTTTCTCCCTTCTCAACT---TCTGTACCCTGCAGCTTCTCCCTCAGGCTTCTATCACCAGATATCCTAACACCCCTGCCCCTCCCTTTGCAGCCGGATCCAGAGCAATGTGGAAGGCCTGTATCTGATTGATGGGGTCCCTTTCTCCTGCTGTAATCCCCACTCACCCAGACCTTGCCTGCAAAGCCAGCTCTCAGACCCCCACGCCCACCCCCTCTTTGATCCCCGACAGCCCAACCTCAACCTCTGGTCCCAAGGATGCCACGAGGTGTTACTGGGGCACTTGCAGGGGCTGGCAAGCACACTGGGCAACATGCTGGCTGTTACCTTCCTGCTGCAGGTGAGTCAGC-AGAGGTTCTGAGGCCTCCTCACCGCCTCCAACCCAGGGACCCCTGGAACTGCTGACCCTTACTGACCTCTTGCCTCTTGCTTACCCCCACAGACTCTGGTACTTCTGGGCCTGCGGTACCTGCAGACAGCACTGGAGGGGCTCGGAGGAGTCATTGATGGGGAGGGAGAGGCCCAGGGCTACCTCTTTCCTGCTGGGCTGAAAGACATGCTGAAAACAGCCTGGCTACAGGGAGCAGGGCCCCATAGGCCAGCACCTGGGGAGACCCCACCAGAAGAGAAACCTCCCAAGGAGTGTCTGCCTGAGGCCTAGAA-CTTAAGGTGGGGATGGGGGTGGGGGGAAGGGGAGGGATGGACAAGACTGGAAAGCTCACAACTCCTTAT--AGGCTCCCGGTGAGGGAGGGGGGAATC--TGGGATTAGAGG-GTTAAGGATAGTCAGTGAGCTGGACTGGGGTAGGAGAAAAAACCAGGTGTCCTAGGGCCTAGTC--CATGGCCAGAACCACCAGGGGACAGAAAAAGAACAAAACCAAGGTGG--GAGAAATGACATGGGAAGGCCTGGAGGCTACTTCTGGTG----GACACT-CAATAAAGCTTTTGGACTGAAG--------CTCCTGATCTTTCTCT-------------------TCAAGGGGGTGGGGGGCCCTGAAAGAACTGATTTCCATCTGATGGAGAAGCCAGGACCCAAGGGTTTTGACCCTGGTAAGAATCAAATGCAAGAACCTGAT-------GTGGG------AAGTGAAGGAACACA-GAGGCCCCGCCAGGTTGAG--TTTTTATTCTGGAGGTAGGAGGGGGGTGGTCAGCATGCTCAGGTGGGGAGGATCCAGCCCAGCTCTTCCAGCCCCCCCAGTGCATGCCCAGCCCCAATAAGTTACCCAGTGACT-CAGCTGCCCTCCCTCCTGAGTCTGTCTGTTTTCTGCTCCGCCCCAGACAGGGCCAGTCTGGCTCAATAGGAGGGCTGTTTGTCCCTAGCCTGTGGGCAGTGCCACATGGCAGGCCAGGGGAGGGGCTGAAGG--------------------GGTGGAGGGGCCGCTCCTGGCTCTGAGGGGTCAGGACTT-----GGAAAACCACATCCTGGGCGGGCCAGGGGCACAGTCCCACA-GCTCTGTGCCTCG--TGAGCTGGTGGGCAGGGTAGGGCCACCATCACACCTCGACAGCTGGGTCTGAGCCGTGGCCCTGCCGCTGCAGCTGCTCCTCCTGCTTCATCTTGGGCTTCTCCGTCCGTGTGTGCCACACCAGAACCTGTCCAGGGAGGTTTCAGTTAGAGCCAGGCCCAGCCTCAGCCAAGCCTTGGGGCACTCAGGAT--AGAACGGATCCT-------CCCACCTCCTGGACACACACCATGTTGGC-TGCCAAGTATGAAGGGCAGGGGGAGGGGGAGGCTTTAGTGCCTCTGAAAGTCAAAgtgttagtcgctcggtcatttccaactctgcgaccccatggactatatactcttttcatggaattctctaggctggaatactggagctggttgccattcccttctccaggagatcttcccgacccagggatcgaacccaggtctc-ctgcattgcaggtagattctttactatctgagccacaagggaaaccAGTGCCTCTGAAATGGGGCCTAATCCCTTACCCTCTCTCTGTCTCAGGGGTGCCAAGAGACCACTTTCCTTCTCTGACTT-------CCCCTTCAGTAGAGTAAG------------CAAGCTCTGCAGGGTCTCTCCTTGTTCAAACACCCATCCTCGATCCTGCTCCGCAGGGCCTCATTCCACTTCTCCCATCTCCTGTCCATCCCAGAACCGGGTTTCTATGCCTACCTCCATCCCCTTACCCGAGTGCAGTTGGCAGCCCGCGGCTCCAGGTCCTTGGGATCTACAAGGTGGCTCAGGAGACTGCTCTCCAGATGGCCCCGAGGAGCAGTAGCATCAAACCGGGCATTGGGTTTAGCCAACAGCAAAGACAGGGCGATAGCAAATCCTGCCATATCCACTGGGAAGGGCCTGTTGGGCTCCCAGGCCGTGTGGAAACCAACAACCCGGCCATCCTGTACGCGAGGGCCCTCGAATCGAAGGCCGCCCACTAGCCCCACAGGCCACACTGAGACACCACGAGTCCAGCGCATCTAGCGGAAGTCGGAAAAGAAGAGACAGGAAGTGGCCCAGAGGAAGAGGAGGAGCAAGGACCACTTGAGTCA------CTCTGCCCCTC-CACTCCCCACCC--------------------------------AGGGACAGTGATGAAGCGGGTCCCACCGGGCCTGCTTCCCCAGCCCCAAGC-CAGTGCTCACCTCCTCAAAGAGTTCCCGGCTGTAGGTGTTGTCATCGTCAGCAAAGTACACGACTCCCTGGGTACCTGGTGGGGGTGGGTCCTTCTCTCCCCCAACAGCACCCCCTCCGCTCCGGAGCCAATCCAGGGCCCTGTTCCGTTGCTCTACACCTCGGGGCCGAACCCAGCCTGGCTCGCCCTCCCGGAGCCGCTGGGCCTTGGGGGTGAGGACCGCCAGGTGTGTGAAGAGGAGGCCAGAGGCAGCCAGCAGCCCCGAGACCAATGGGGTGGGGCCCTCAGCATCCTCCACCAGCAGCCAGTGCAGCCGGGGCACCAGGCTCAGGGTCTGGGACAGCCGCACCAGCTCCGCCTTCTGCACCAACCTGCAGGGGGAAAGATGCAGGAGGGAAAGGGGTGGCCACCACTTGCCCACTCCAGCAGGTACGTATGTCTTCTTCTGGGCCACTCCTAGCACCCTCAC-GACATTTCCCTGACCAGCACCCAAACTCCCTGT-----TGTTATTT a score=49428 s mm7.chr19_random 1392616 2046 + 2598976 GTCTATTTTTAAAGGAAAAAGACATTTTCCCACAAACCT--GACTAAAGATGCGGATCACTTTTCATAACATTTGGCAA-GCTCTAGTTTAAGCATCACCCCATACTTCAGTGCCTCCCCAGATTCATCATTAACCCT--CTTCCTGTTCAATACAGAGCTCCTGAGTGTACCAGAGCC-GTACCTGGCGTAGGTGGGGGTAATGACATAGATAGTAGGCAGGGCCTCAGGTTCAGGGGGCTGGGCTGGGACAGGGGGTGGGCGACGGAGATCAGCTTGCAACTGGGATATCCTCAGGTCCTTCTGCCGAAGCTGCTCAGCTGCAGCTCGAAGCGGAGGGAGGCAGTCGCAAGGCTGGCCTGGTACCAGGAAGCACCAACAGGGTGAGCAAGTTGTGACAGAGAACCACAGGATAGTAAGTAGTTCAAAAACCCAGGCCAAT-TCTTTTTAATTC--CTAGCCAATACAGAAATTCCCTTGTAACTTGCTTT-----TTTTTTTTTTTTTAGAATGGTGTCAGAGACTCTTCACCTTTCACTGTTACTGTGTTACTGTTTTAAGGTAGGTCTTGCTATAATGGCTCCAAGCTGACTGACCTCAGACCTTTAACCCACTGACCTGTTTCCCAAACGGTGTGCCACAACATTCAACTCTTCAATTTTAACCAGTTCCATCTGTCACTCTATttttctttgctggggctccaacccagggccttacacttgtgagtgttctaccactgtgctacaccctcagcccTGCCACTATTTTCACTAGTACATTTCGACGATTATCTGtcagcctttctgtcctttctaccttctgatcctaattttaccttccacacataaggaatataaCAGTCTGAACTAGAGGCTCTCCTGTA-ATGGC---------ACTACCTGAAAAGCGTTTA------------CCAAGCTCCCACATAAAAGGCTGGATTCAAGGCGCTCCG-TGGTCACGTGACCACTGACTTGTCAGTAAGTTCACAGATTCCATTACACGACAAATATTTATTGAA---------TAAAAGG-----------------GGGGGGCa---------------------gtccctactccctag------ctactttagtggaagaggtagacac-----------------taataaagtcattacaaattgtgatatgggccacttagaaaa----------------ttaaaaga-gatcaagactaataagggttac-ttgagctaaggtggtcagggaagtcct-------gatgtgacatct----ggcctaaaacc---aggatgagaaatagatggcctgg--------aggtggggagagcacagctggtcaaaagctggag---gggacaatgaaccagggggttctcaaaaacctatcagcaagccggtctga--gaggcagagcaa--ggggagggtggAAAATAGGTT------GCTTGGCGGCGGCGGGGTCATTTGGGGCTTGACCGG---------------------TATCCGCGGAGTTGCAGACTGCCGAGA---GTTCTACA-------------CAAGGGGTCACCGAGGGCTGTCCCGAGGGCTGAGC-----GAGCGGGAAGCCGCTGTCTGC---GGGTCTCATCCCCAGCG-----------------------CCTTGGGCCGGCCCTCCGCACACCGCCCCGCCCCGCCCCGCTCACCGAGCTGCACCAGAGCGTAGAGGAGGCCGGCGATCGACACCAGGAAGTAGGCAAGAAACACGTTCTTCAGCTTCAGCTTCATG--------GCCGGTGCCACCGGGGCAGGCGGGGTCCACCGGGACCGGCAGGGACAGGTccgcccggccctccgccctcccgccggccccgccccggccg----cccgggccgcgccccgccTTCCCCAGGCTC--CCTTACTAGTTCCCGGGAACGCGGGACTCTGAGCG-ACACCTGGGACCACTTCCGGCTAGT------GGCGTCCCTCCCAC-AGGCAGCTTCCGGTCCCGCCTCCTGGT-----AGGCCATTCAGGGCGTTGACGCTATATCCGCTGGGTCAAGCGGTCGTGGCAGGCTGACCAAGAGCTTGTGTGGCCTAGCTCTATAATCATCTTGAAGCTCCCAATTGAGCACAAGCTCCACCCTTGTCACTGAG------TTTTCTAG-----ACTCACTCAACCATCCTTCAGCCTCAGCATTGGCTGCTTAAAGAAACGGTTGTTC----ATTACTTGTTCAACCAATGAGTGAAATCTAAAAC s bosTau2.chr29 32066864 2040 + 45822729 GTCTATTGTCTATAGAAAAAAACAATTTCCCCAAGATCTCTGGGGAATGATGTGGTTCATTTAGCCTGACATTTGGCAATGCCTTAGCCTGAAGAACATCCCCTGGCCCAGTGCCTCCTGAAACTCATCATCAACCCCAGCCTCTTGGTCCAGGCAGA--TCCTGGGTGAGTCAGAGCCCATACCTGGCATAGGTGGGGGTAACAACATAGATAGTAGGCAGAGCCTCGGGTTCAGGGGGCTGGGCAGGGGCAGGGGGTGGGCGACGGAGATCGGCTTGCAGCTGGGAAATCCTCAGATCCTTCTGCCGAAGCTGCTCCGCTGCTGCCCGCAGGGGAGGGAGGCAGTCACATGGCTGGCCTGGTCCCAGGAAACA-----GGGATGGG--------GGCAGagaaccacaggatgttcagcatcccaaa-----gggccattaaccttcccattcaactaaccaatgcggggctctccttacaactt-ctctaacagcttttctacacctagggtggtg--aggaactcgctacctt-------------------------aaatag---------------------------------------------------------------------------cagcgct----tctccaactttaa-caattccatccat------------------------------------------------------------------------------------tacaattttcatgtgtctattaagctgatcacctgcc------tccatcctttctacctgctgggcctaattttgccttct-------ggaagcataa-----tgaacaagttgatctcctaaacagggcagtctttcaaatacctgagaaTCATGCAGTGGCCCAGTCTCTAAATCCCTGCATAAGAGGCAGGGTTCAATCTGTTCCGTTGGCTGTGTGACCAAAGAC---TCATTAAATTCATTGattccatcactggataaatatttattgaatgctcctcctgggaggcactgccttacgtgcccgggctgcagcaggaaaccacacagacatggtccctgccctcatggaggtttcagtttagtggaggagctggacgctaagcaaagaaacaaattaataaaattattagaaactgtggtaagggctatgaaggaaacaaataggagggagacttaaaagaggacccagagtaagaagagtgacttttagctaaggtggtcaaggaaggcctctgtgaggcggtgacatgtcagcgagctgagacctgaaggatgagaaagaggcagctggggaacaactaggagaaaaggttacagcagagacaggtttagtgcttagagcaacgag-cgtggggttttcgagaaactgtcatgaagccagtgtggctggagcagagcgagcgagagggatgggaaatggggttagagaggcagaaggcgacgggatcacgcggggcctggcaggctctgggaaggagtctgatttcacccgaggtgcggcgggcagccgcggtgcgttctggagaggggagtgCGCCCAGGGGCCGCAGAGGGGCTGTCGGAGGACCGAGCTGGATGAATGGG--------GTCTGCGCGGGGCTTCATCCCCAGGGCGGGATGCACAGCGGAGGGGTGCCCTCCGGCCGACTCGCCGCAC----CCCCGCCCCGCCCCGCTCACCGAGCTGCACCAGCGCGTAGAGGAGGCCGGCGATCGACACCAGGAAGTAGGCGAGGAACACGTTCTTCAGCTTCAGCTTCATggccgcgccgccgccgccgccggggcaggcggggt---------ccggcggggACAAGGGGTTCCCGCCCCCCGCCCGCCTGAAAGCCCCGCCCCTGCAGCGGCCCCGCCCCGTGTCCCGCCCTCCTCACGCTCGTCTCGAGAGGCTCCTGGGAGC-TAGCGCTGGCAGCGCCCGTCTGGGCCCACTTCCGGTCAGTCTGCACACCCCCCTTCCCTCTGGGTAATTTCCGGTCCCATTGCCTAGTTCTGGGAACCACGGGAGTGGGCGACGTCATATCCGGCGTGTCAAGCGTGCCTGGCAGG-TGGTCAGGAGC-AAAGTAAGGTAACGTGGGAGTGGCTTTGAGACCCTCCGC----CTTGATCTCCA-----GTCCCTGAGAGCATATTTTCTTACATTCATTCACTCACCCATCCACCAGCc---------actgcacgcagtgacagtagctcaataaataattgctacatgaatgagtgaaatctacagc a score=55845 s mm7.chr19_random 1397946 1514 + 2598976 TTGCTGGGTTCTTC--TAAAGGACTAGC-ATC--TCAAGCTAAAG-----CCGCCCTCAGGTTGGCTCATTTTGCTGAAATGAAGCAGCTTATACAGAATAAAATGGTAGGCCACTATTTACTGGAGCGATTTTG-TTCAGTTTACAAGTATAATTCAGACATCCAATTATTATTTATGTTTTGTTTCGTTTTTTATTGTTTCTCCTTTTTATCAAAACTTGTCACAGTTGGGAACCCAGAGGAAGTAAAAAAAA---TTCCCACAAATAGTTCTCC---TGGTTCC---TGAGTCCTCCCTCAACCCGCTTACCAGGGCTTGAAGCCACCCCTGGGTACACATGATCGTCTCCCCCCACCCTCAGTCTTCTTCCCAGCAATAAATACAGGTGACCGTGATTCAGTGAAACCACAACTCATGTCTCTATCTTGAGTGTCCC--AAGGGGACCAGA------GGGGCAAAAGAAGTTTAATAACCTTGCCCTCCTAATTGTGTGGAAGCGTCTC-CCTCTAAGA----------------------TGGGAGAAATGCAGCAGCTCTGGAAAGAAACAGGAAGA--CAAGGTTGAGATGAGAAGGAAGAGGACGTTCTCCAGGAACCTCAATC--TTGATCCATTTGTCCCTTACCAAG-TAAGGGGTGGTCCCAGTGTATCAGTGGA---------ACAGAGAAGGGGACATTCAGGGGAAGGAATGAAAGGATGG----GCATTTTGGATAGGAGGGAACAGGGAAGAAGAAAAGGAACCCTAATGTTCACTGCCCTCATCTTCTTCCAAGAAATGGCATCAACAAACAAGAGGCTTGAATAGATGGGGTCTA-AGGAGAAGGTAGGGACCCTAAGGAAGAGAAA-------AAGAACGACAAGGCCCCTTGGTCTTCACAAATGACTGTGCTCCAGTTACAGCAACAGGATACT-GAGTATGAAGGG---CTTGGTAACA-CACAGAAGGAAAGACTAGG---TCACAAGTGGAATTCAGAGCCCTAGGACAGCCCTGTCATCTTGCCCAGATGTTGACAGAATCTGGGTCGTAGAATTAGAA-GGTGAAATCTAGGTAGGGTCAAACTCCAAGGCAAAAGAAAAGGTAACTCAATACCATCATGCCCTTC-CTCCCAACTCAGAACAAGTTCCTTGGGTTATCGAAGATGAATACTCCAGTCGGATGCCACGCTGACACCAGGTTTACGCAATATCAGCACTGAGGTCTCAGGGTCATGCTGGAAGGACAGGCGACTTTCAGGGGATCCTGT----GGAAGAAAGGCAAGCACCACAGTCAATAATAGGCTACCTCTCCATAGCAAGGTTGCAACCCTGTCAACCCTACCTCTGCTTCTTTTCCCAATTTCAAGGCCAGACCTATCACTAACCTTTGGTCTGGAGCACCACAGCTGCTGGCTTTCCAGCCCCCATGATGACTACTCGCTCAATCCAAATAGGTGTCTCAAGGTGGCCTTTGGGGTCTGCTGAACTGGAGGCAACAAAAGCAAATGCCAATTGGAGAAAT--------GGGCAGGAAGA--TAATCCAAAGCGAAGTTCAAAGGCAACAAAAGCACAGCGAAC s bosTau2.chr29 32070812 1536 + 45822729 TTGCTAGGTTCCTTCGTGACATACTGGCCATCAAGCAAGCTGATGAAGGCTTGCACTCAG------TCATTCTGCTCAACCAACAAGGCATAGGCTGAA---AATGTCAGGTCCTTGGGCTTTTAAGGGTCTGTGGTTCAGGCCAGAACTAGAATCCAGACA-CCAACAGTAATTAATG----GTTTCTCTCTTTATTGTTTCTCCTTTT-ATCAAAACCTGTCACAGCTGGGGGCCAAAAGGAAGTAAAAAAAAAAATTCCCACAAATATCCCCCCCACTTGTCCCCAGTGAGTTCTCCCCCA-CCCGCTACCCAGGGCCTTGGGCCAGCCCTGGGCACACATGATCATGTCCCCC-ACCCTCAGCCTCCT-CCCAGCAATAAATACAGGTGACCGTGATTCCATGAAACCACAACTGATTTCTCCATCTTGAATGCCCCTCAAGGGGACAAAATTTTAGGAGGCAAAAGAAGTCT--TGCCCACCCCCATCTTGAGGAGTGTAAACTTCTTTCCCCCAAGGGACAGGGGAGGTAGAACACCCCTGTCAGAACCGCAGTAGCTCTAGATAGAAGCGGGGAGAGGAAAGGTTGGGATGCCAGGGAAGAGAATGATTTCCAGCAACCTCACTCCTTTGATCCATTCATCCCTTCTCAGGGTAAGGGGTGGTCCCAGTGTATCAGGGGAGGGCTGACAATAGAGAAGA----ACCAGGAGGAAGAAATAAAAGGAGGGAGAAGCAGTTTGGTGGGGAAGGAAGAGG-AAGGAGAAGAGGAGGCCAAAAG----CTGCGGTCATCTTCTTCTAAGAAATGGCATCAACACGCAAGGGAAAC-AATGGAGAGGGTGTGGAGGAGACTGAGGGCTCCCAAAAGAAAGCGAAGGGCAGCAAGAGCCCTATGATCCCCAGGTCTTCACAGGTGAACGTGCTCCAGTTAGAGCAACAGGATATTTGGAGATGAAGGGAGATTTAGAGTCAATGGGGTGGGAGAGGTTGGGAGATCACAAAAGAAATTCAGAGCCCAGGGACAGCCCTCTCATCCTGCCCAGATGCTGGCAGAACCTGGATCTTGAGATCAGAAAGGTGAAGCCTGGGGAAGGTCAAACTCCAGGGCAGAAGGAAGAGTA--------CTATCATGACCCTCACACCCCACCCC-AACA--TCCCTTCAGTTATCGCAGGTGAATAGTCCAGTCAGATGCCACATTGACGCCAGGCTTGCGCAGGATCAATACCGAGGTCTCAGGGTCATGCTGGAAGGACAGGCGGCTTTCAGGAGATCCTGATGGAGGAGGAAGAAAGAGTGCCAGGATCAACAGCAA-TTACTTTCCCATAG----GTTGGGGTCC--------------------------CCAACCCGGAGGCCAGA----TCACTCACCTTTTGTCTGGAGTACCACGGTTGCTGGCTTTCCGGCCCCTATTATCACCACCCGCTCAATCCAGATTGGTGTCTCAAAGTGGCCTTTGGGGTCTGCGGAGCTGGAGGAAGCAAAAATGGATACCCAGCAGGAAAACAATTATCAGAGCAGAAAGGAGGAGAGCAGAGCAAGGTC--AAGACAG-GAGAGCACAGTGAGC a score=49856 s mm7.chr19_random 1399495 1536 + 2598976 CCCCATTACCTAGAGACCAGTGTGCTGCCAGAGAAAGAGAACCGCCGCAACAGGAACTCATGGCGAGTCTGATAGTTAAAGGTGTGTCCATCATCTAGAAAGAGCTCTCCTTGGGCAGTACCCTGTGCAGGAAG------AGGTGAGGAACTTAAGCCAAAGAGGGAGTG-------CCTTCATTCACATCCAGAGGACTGAGTCCTAGAA-----AACAGGCAATAGTTGAGATAGCTCTC-ACCCACTGGAAACTCACCTGGGGACTGAGAGCAACAAAGAGAGTGATAGGATCGTCCTTCATACAGTCTGAAGAGCGCCTCACACGCATCCATCGAGGCACAATGGTTCCGCCACGCTGGAACACGGGGATCTAAGGCAAA---AGTGCTGCAGTGAAGCACTACTCCTTCAGGCCTTTCAGCATCTTATGTTCCTTCCCTCT---------GACTCCCCAAATTATATATTTTCTCCCCTTCTGGAGAAGTACAAGCAAACAGAGATGGCAGCTAGA-GAGATATACTCACACTGCTCAAAGTTACTGGCAGATACAAGGTCTGGGGCCCATGATGCTTCTGATAGCTCTGAATGTCATACCACACCTGTGGATG-ACAAGATA--CTGGATCACTCAGTGCATAG-GGGTTCCATGCTTTT------------------GCTTCTTTGCCCACAATA---TTCTGTAACTTACTTCTTCTTGGCCAGGCAAATAGACCTGCACTCCGTGGGCCCCAGCATCCGATACAGGGTGAATAAGGAGTGCATCACCTAAAACATACCAGAATTAACAGGGAACGAGGGCATTTGCTGCCAGTCTAGAGAGCATTAGAAGATCTG-TCTGTCACAAGTCCAGCCACAG---TTACTCCAACTCCACACAT------ACACATCCCACACATTG-------TTCTTAAGCTGAAGCCCAACCTCCTACCAGCTGTCCTCCCATTTCTCACCAAGCATGAACTGATCCTCTATACTGAAGGTAGACATATCCTCAGGATACTGTACCCAGAGGGGCCTAGGAAAGAAGCAAGACAGGAAAGGAAGCCA----TTATATTCTCAGAGGTCAAAGATGCTCTCCTCCAAGAGCTAGCAATTAGAATTGCACTGGGGAGAAATCCAGGAGCTTTCAGCCAATGGATTCAGGACTTTAGCTGCAGCTACAGAACTCCACCTT-GCCCGGTCACTGTACTTTCTCTCTTACCTCCCTAACTCCACTCTTCTACCCAC--------AGTTCTCTG--------TCTTTCAGTGGCTTCCTTGAGCACTTCAGTGACACATAGCTTGCAAGGCCCTTTAGGGGCATAAGCATCATCTCTATTCCTAATGACAATCTGTCTACCAGTTCCT------------TCCCAAGGCCCACTGACTTTTCTTTTCTCATTTT--------------CTGGctt--gtttcagtgttttggcacctgcagcctcctcgctgtggaatgtccttccctgagatcacaaacacctacttcattcattgtacaggt----tcctaatgtggctatattctcaaaagtgccttttgtgactacctaatcCTGTAACTTCATGTTTCTTATTCTTGTCAATAACTTATCACTGTGGGCAATCTTC s bosTau2.chr29 32072700 1574 + 45822729 CCTCCTTACCTGGAGACCAGGGTGTTGCCAGAGAATGAGAATCGACGCAGCAAGAACTCATGGCGAGTCTGATAGTTGAACGTGTGCCCATCATCTAGAAAGAGCTCTCCTTGGGCCGTACCCTGAGCAGGAAGTGGGACAGGTGA-GAGCCTGAGCCCCAGAGGGAGTGAGGGGCACCTGC-------CCTGGAAGACTGCCTTCTAGGAGGGTGGACAG---ATGGAGGTGGCGGCTCCCTGCCCACGCG---CTCACCTGGAGGCTGAGTGCGACGAAAAGAGTGATGGGGTCGTCCTTCATGCAGTCTGAAGAACGCCGCACTCGCATCCACCGGGGCACGATGGTCCCTCCACGCTGGAACACGGGGATCTAGGGCAAGACCAGTGCCAGGATGAAGCAGCAGTGCTGTACCTCTTGCAA--------GTCTGTGCCCCCTTAGGAACTGGACTCCACCA--TACACACTCTCTCCCCTTCTGGAAACCTAGAGGCACATGGAGCTGGCAGCTGGGCCAGGCATACTCACACTGCTTAGAGTTACAGGCAGGTACAGGGTCTGCGGACCATGATACTTCTGGTAGCTCTGAACGTCATACCACACCTGTGGGTGCAGAAGATAGCCTCGGTCACTCGCTGCACAGAGGACCCCACTCTCTTCACTCTCTCTGACCTCCACCTTCTTTCCCTACCATGCCCTTCCTTAACTCACCTCCCCTTGGCCAGGCAGATAGACCTGCACACCACGAGCCTCGGAGTCTGATACAGGGTGAACCAGCAATGCATCCCCT-AAACACAGCAGAATCCACTCTGAATTGGGGGATCGGTTCCCAA-AGAGGGAACCCTAAAGCACCTGCCCCTTTGCAGCAGCAGCCTCTGACCCTCCTCCCTTCCTGCACATCCACAGACATATCCCCCACAGTGCTTGCTTCTTCTCAGCCCTACCCCAACCCACCACTAACTGTCCT--CGTTTCTCACCAAGCAGGAACTGATCATCTATACTGAAAGTGGTCACATCCTTAGGATAATGCACCCACAGGGGCCTAGGAAGGAAGCAAGACAAGAAAGGAAGACACCTGCTGTTTTGGTGGAAGTCAAAGATG--CTACCCCATGAACTGGCAATAAGAAGAGCACAGGCGTTAAGACCCGGATCTGGCAACCAGTAA------------GGCTTCAGCTATGCAACCTAACCTTGGACCTGACATCTGGTTTCCCAACCCACCTCCCTGCTGCCTCCTCCCCAGCTCCTTCTGGAAAATGTTCTGCAGAGCGACCTTCCAGTGGC---------CACTTTAtta--tcctggcctacaaggccctccaggatca-ggtcgtattttccactc-------cacctcacctacctctccctctggtttgttacccctgagacacgctg--tttttttttcccactgctggaacacaccaaactggtttccatttca-tatgtatgcacttgcaatctctcctgcttggaacattctc-----ggaccacaagtggctgtcttactcatcagacaggcctcatctTTACGTGGC----------------CTGTTTGTGGA-ACTTAATTCCATTAC--CGTG-TTCTACTTTTTACAAACAGCTTGTCAGTGTTGGCGATTTTC a score=31346 s mm7.chr19_random 1401715 870 + 2598976 ACAAGGCCCTGGAAAGGGAAAGAAATAGGCCCAGAGATGCAAACCAGACCTCATTATCTCCCAGTCATCT-ATCTGACTCTACACAGACCCCACTGACTAATTTACCTCATGACAGGAAACCCTTCCTTGTGAGCTTGATAGAAGAGGGTATACCAGAAGGGCAGCAAAGAATATCGCTGGAACAAGGCATCTCGGATTGCATCTTGGTATTGAGACGCTAACAGCCATGGCTCTCGCCGCCCAGTGTCCAAGTGGGCATGAGCCCGAAAGAACGGCTGGTAGGCACCCATTTGGTACCAGCGCACAAGCAGCTCTGGCTCTGGGTTCTTGAAGAAGCCACCCACATCCGCTGGGA---GAGGAGAAGGAGCAGGTTGCAAAATGGCAAAGAAGAAGCGCTG-GCAGCCATTCATA--------------TAAATATTCTTTGTTCATGCCCAGGT----------CCTTTGACTTTATCCC----------AATCAAAACCCCAAATG---TCTCCTTCTCTTACCTCCACAGAAGGAAAGCCCCACCAGTGCCAGGCTGAGACACATAGGGATAGAGATCTTCAAATGATCCCATTCGGCAGTGTTGTCCCCTGTCCACACAGCTCCTAAAAGGGTCAAAGGGGAAGGAGCCTGATATAGAGCAAGGAACTCAGCCTTTATCTAGGTATCCTCT--GACCTGCCACTGTCACTAGACAAGTGTCCAGGACACTCTGATGAGAGTGA---AGTTAAACACAACTCTTTTTTGGTACTAGGAACTTAGCAAAGGCCTTGCATAAGCTAGGCAGTGCTCCCCCTCCAT-CCCTGCCAGAAGGCTTAAGCGAGGTTTAGATATACCATTCATATGTCAAAATATACAGCTGGAGGTTGCAGTGTGCAGCTCTCCAAAGAT s bosTau2.chr29 32074462 836 + 45822729 ACAAGGCCCTGGCGAATGAAGAAAAGAG-CCCAGAGATGGAACCCTGTCCCCACTGTCTCCGAGCAACCTCAGTCCACTCTCCACAGACCCAAGCGAATGCCTTACCTCATGACTGGGATCCCCTCGCGATGGGACTGATAGAAGAGGGTGTACCAGAAAGGAAGTAAGGAGTATCGCTGGCCCAGGGCATCTCGAATTATCTCATGGTACTGAGACGGTAACAGCCACGGTTCCCGCCGACCAGTGTCCAGGTGGGCATGAGCCCGGAAGAATGGCTGATAGGCACCCATCTGGTACCAGCGCACAAGCAGCTCTGGCTCTGGATTTTTGAAGAAGCCGCCCACGTCCGCTGGAGACGGGAGAGAGAAAGCAAGTTGAGAAGAGG--GTGAAGGAGGGCTAAGGAGCCCCCCAAGGCCCCGGCCTGGACTATCGGTTCTCTGCTCAAGCCTAGGGTCCATCTGTGCCCTCTACCCTGTCCCTCTCCCGCCAAACCAAGGCCCCAAATTACTCCTCCTCCTCTCACCTCCACAGAAGGAAAGTCCCACCAGCCCTAAGCTGAGACACATAGGAATCGAGATTTTCATGTGGTCCCATTCAGCAGCATTGTCCCCTGTCCACACGGCTCCTGAGGAAGAGAAGAGGGAGGGAGTTT-ACGTACAGTGAAGGGCTCGGCCTTAAGACAGCTGACCTCTCTGACCTGTCACACCTGCT---CTGGGGCCCCCAGGGTCCTGCTGAAAGTGGCGGAGTTCACCAGAGC------------------ACTCAAACAGGGACTGGC-------------------CACCCCATGCCCTGCC-------------------------TCCCTTT---------AAATGCACAGCTGGAAG----GAAGCGCACCACTCAAAGGGT a score=68434 s mm7.chr19_random 1402689 1715 + 2598976 gactacctggacagtttaggcagccctacgactaaagctattcctgactcagcaaccttaagtgctaggattacaggcatttactcccacacacagctGCCACAGCTCTAGTCTCCAAACCTTACCAAAGCGCTGGGAGCCTGAGAAGAAAGCCCTACTCAGGACAAAGGGACGCTCTATGCCCCCAGAGCGCTGTATTAGCCCATCAGCAGTCGCCATGTGCTAGGAAGAAAGAGAAGAGAGTG-----AAGAACAAATGCCATCTGTCATCTGGTTGACAACTATATATTCTCCATGTTTAACTACTGTCCTC---CCTTTGTCTGCCAACTTTCCTCTCCCGGTTCCTTACCACATATAAGCCATAGATGTTATGGATGTCCCGGTGCTCCCAGCCTCCATAATGCACAGCATCCTTCAACATGGTGACCTCAGGACCATTGAACACAGACGGTTCATTCATGTCATTCCAAACATAAAGATTAGGAGCTGAACCCTGAAAACACA-GGTACCAATTATGTATGGGGGGAAAAAAAGAGGACGACGGTCGACAGTAAACACTGTCAGAA-AGAAAGCTTCTAGAAATCCAGAACCAAGTCTTTTTCAGAATCCTCC-AAGATCTTCAAGTCCCCACGAAATGTTATAGGT--CAAACAAAAGCAATGGTCCTGAACTGAAAAGCTGATTCATGAAGGAAAAGTAGAAAAGACAGAAGGCATATGGATAGTCTTTCCTACCTCATAATTGTCAAAGCTGAACATGTTAGACCACCAGGCCCTCATCCTTGGATTAGTGAAGTCAGGGTAACTAGCTGAGCCTGAGAGAGAAAACACCAACTCTGAATTCCCAAAGAGGCAAAACCAAAACATAACAAAATATCTCTACCTCTTTGGCTGCTCCATAGCCTCC----------CCTTCAATTATGGGCCTGCCTACCTGGCCAGCACCAGCCCTCGTAATCAGAGCCATCCCGAGTTTTAACATACAGCCCATGGTTTCGCAATTCTTCGTGAACTCGGTAGCCAGAGTCTACCTTGATGTGGGGGTCCACAATGGCCACCAGCTGGGAACAAAGAACAGAAGGAGAAATGGTGGAGACT----------ACCATGCCTCAACCCTATGCAAGAAGACCAAACACAGCTACAGGACCCCCTTACCTTCCGCCTCTTGGAAGCCAAGTGCTCAAGCATATTGAGGGGCTGAGGAAATCGGGTGGGGTCCCAAGTGAAGTACCGCTTGCCATCAGCATGTTCAATGTCCAACCAAATGACATCACAAGGCATGTTGTGATCATCAAAACCCTGATCCACTTCCAAAACATCAGCCTCATCCCGGTAGTTCCAGCGACTCTGGTGATAGCCGAGGGAGAAGAGTGGGGGCAATGCCTGGGTCCCTGCAGGTTTA------------------------------------------------AATGAA-------------------AGGGTCACTGGAGCTGAA------------------------------GAAATAGCAAA-------------ACTTAAGAGCAC------------------TTGCTAGCCA--GAAATGGAAATATCACCTACCTGTGAGACTAGCATACTGCCTAAAGACATCAAAAACCGAAGGGCCAAGCATTAGGAAAACATCAATAATGCCACTCTCTGACATCCAACGAATGTCTGTCTGTGGAGTCTCCCCAGAGCCCTGCAGGTAATCAAGCATCTTCCCAAACAGGGTCTGTGAAGGAGA-CAAAGGGAAGTCAGCTTTTCAGTGCCAACTTGAAACAAAAGCAGCACTTTCTCCTGAGT-CTCACACAGCTGGCTCCTAACACC s bosTau2.chr29 32075298 1712 + 45822729 GGCTGCATGGACAGAC----CTCCCCTAGAACCA-----------GACCCAGGTCCCT--------------------------------------CCACCAAATCTCT--CCTCCAAATCTTACCGAAGCGCTGGGAGCCAGCGAAGAAAGCCCTGCTCAGGACAAAGGGGCGTTCGATGCCCCCGGAGCGCAGGACCAGGCCATCCGCGGTCGCCATGTGCTGCATGGGAACAGGAAAGAGCGGTGGTAAGGGGCAAAACCAGCTGCCATC-----------------------------AGCACCAGTTCTCAGGCCTCGGTCTCGC-----------CTCAGTCCCTTACCACGTAGAGGCCATAGATGTTATGCACGTCTCGGTGCTCCCAGCCCCCATAGTGCTGGGCATCCTTGAGCATGGTGACCTCAGGACCATTGAACACAGATGGTTCGTTCATGTCATTCCAGACATAGAGGTTAGGAGCCGAGCCCTGAGAACACAAGGCGGAAAATGGGAACAGAGGACAGAGGGGAGGAAGAAGAC-------AAACAGTGTGAGAGCAGAGAGCTCCTGGGAGTCCAGACAGATGCACCTCTCAGGGTCCTCCCAGGATCATCAAGGGCCC-TGATATCTTACAAGCAACCAACCACAGCAGGGTTGGCAGGCAGAGA--CTGACTCCAAGAGGTAGTGTGGGAAAGACAGG---------------CTGCCGTACCTCGTAATTGTCAAAGTGAAACATGTTAGCCCACCAGGCCCTCATCTTGGGATTGGTGAAATCAGGGTAACCAGCTGCGCCTAAAAGTCAAGGA--TGGCTTTAAACCCACGAAG-GGCAAA---------------------CCGGCCTCCACGCAAGCTCCCTGGTCTCCTAATCATTCCCCCTCATTTCTGGACCCACCTACCTGGCCAGCACCAGCCTTCGTAGTCAGAGCCATCCCGGGTTTTAACATACAGACCCAGGTTCTGCAACTCTTCGTGTACACGGTAGCCAGAGTCCACCTTGATGTGGGGGTCCACAATGGCTACCAGCTGTGGGCAAGGACCACGGG------TGGTCAGAGCTCTCCAGGGAAATCATGCCT-----------GAGAAAACCAACCACAGCTGCAG--CCCTCTTACCTTCCGCCTCTTGGAGGCCAAATGCTCAAGCATGTTTCGGGGCTGTGGGAAACGGCTGGGGTCCCAGGTGAAATACCGCTTGCCATCGGCATGCTCAATGTCCAGCCAGATGACATCGCAAGGCAGGTTGTGGTCATCAAAGCCCTGATCCACTTCCAGAACGTCAGCCTCATCCCGATAGTTCCAGCGGCTCTGGTGGTAGCCGAGGGAGAAGAGCGGGGGCAATGCCTGGGTCCCTGCAGGTTCGGGGTGGGGGGGGACGGGGTCACAGCGGGGTCAGGCTCAACCTGGAGCCAATGGAGATGCCCGGGAATTCAGGGAGGTACACCGGGACTGGGCCAGAGAACAGGCCGAGGCACAGGACTGCTGAAAATGCACAGTCACCCACTCCCACTCAGGGAGACAAGGATCAGGAAAGCAGGCTGCAGGCCCATGGAGTAGGGGCGCCACACACCTGTGAGACTAGCGTACTGCCGGAAGACATCGAAGACAGAGGGCCCGAGCATCAGGAAGACATCGATGATGCCGCTCTCAGACATCCAGCGAACATCCGTCTGTGGAGTCTCCCCAGAGCCCTGCAGGTAGTCCAGCATCTTCCCAAACAGGGTCTGCAGGGAGGACCAGAGAGAGGTCTGACCCCACCCtcctgctt---cccaagccagtg--ttctcctgagtgctctcacagcaggctccttgagcc a score=1256 s mm7.chr19_random 1404638 58 + 2598976 CATTTACCACTCCCGAAGTCCTCT-GCCTTATAATAACCTGATAATACCTGTCTTCTTC s bosTau2.chr29 32077116 57 + 45822729 cgcttaccaccactgagctcatctagacctat--tacctatttaacctctgtcctcttc a score=120273 s mm7.chr19_random 1405081 2564 + 2598976 GTGTTTTCACACTCACATCCGCATCCCTAGCATAAGGCATGGCAGACTCTCACCACATCTCTCCCATGCCATGCCCTCACCTTCCCAGCCGTGTTGGAGGATATATCAACCCAAGTCTCAGCAGCATTAAGCCAGAAGATGCCCAGGTCTCGATGAAAGCTGTGTGCCAGGAGCACAGGCACAGACCCATATAGAGCCATGGGGTTGTTCAGCTCATACTGGAACACATCCAAATTGTACAGGCGGTACGGCTCACCGCCCCTGGTGGTAGACAGACAAGACTTAGGCTAATCAATGGCCAGGCTACAGCTTAAGCAAATGCTACTCCACAGACATAGCTGAGAGAAAACGAAAGTCTCTTTCTTTAAAACAAGTGCATAAGCAAGGAGGTAGCCC--AGATACAAGAAGGGAATTATGCTTGTCTACAATATACAA-CTGTATGAGCAAATCCC-CAGCCCTGA---CTGCCTCCTTTTCTAACCCCATCCTAGTGTTACTATCGGACTCACTCAGTGACCTTCAGTCTCAGGCTGTCAGCATGCTCAGGGATCCCATACACATGTTCCATTCCTGGCAGAGAAAAGTCCAAACCTACAGACGTGGGGCCTGAAAGAAAAG-----GATGATTTACAGAGCTTCTGTTTGGCAAGATACCTCTGTGCCCCTGTCCAGGGCTTTCCCAGCCTCTCACCATAAGGCTTGCTGTCAGAATGTGTTTTGAATGTCTCCTCCCAGGCTCCTGGCTCATCCTTCTCAGCCTTTTCCTGGGTCTCCTCTGGCTGTA---AGAAAAGTGGACTGATACCCACTCACGTCCCAGTTATCTTTTCCCACTCTCAGG--GTCTAAATCTCATCCTTTAGGATGAGAACAGGCTCAGTTTTCTTGTGGGCCTTTACTCTCCGGCCTCCCAGGCAGCCCCATTCTCCACTCCAACCACCTGGCA-CTTCAACTTACCTTGTCACCATCCCCAGGTGTTGCTTCAGGCTGGGCTCCATTGCCTTCAGCTGGGTCTTTTGATTCTTGCCTGGAAGGTAGGAGAGCTGTCTGCTCCAATCCAGAGGGGGCGGGGACGAGGGGCTAATGGAAGGAGGGGTGAGGGAATAGAGAGCCGAGGGTCCAAAGGAATGAAAGCACTGAAGGAAGGGACTGACTGTTAAAGCTCGGGAAGGGA-CCCCAGTGAGC-------------TAGGATGGGGAGACAACTGACAGAGGAAAATGAGGAGAAAATGCCAGCAGGAAGTACTTTCTACATACAGGCCCATATCAGCAGCCTCTGTTGATA-TCTATAAGAGATGGGCAAGATGGTTCAGTGACCTGGGTTCTAAATACCAGTCCTGGCTCTGCTGCCATCATAGAAAAAAATCTG-----ACCTTTCTTGATCATACTTTAG--------------------------AAAGGCAAGTTGGTCA-GACCATAAAAAACGCCTCTCCAGAC----------ACACTCTGCGACT----GCAAAAGGTTTGGCCAAAGAATGCTTTTCAGAGGCAGCTTGCTAACAGTTCTCTCCAGAGTCTCAATGTATTCCAAGTGAGAGCCAGGAATCACAGCGAAACAG--AGCACCCCTCCAGCCCTTAGCAGAGCAATAAGCTTCCTACATTCCGTAAGCACTTCCAGCA-CTCATCTTC---CCCCCAAAGGGCTCACAGCCAGGGGACAGCAAACAAGGACCCAAATACCA---AGAGGGGGAAGGACAGATGGTGAAGAGGAGGGAAT-AAGAAGGTCCGGGCAAGTTCCCCAGAGGGCCAGCGTG-AGGGTGGGTGAGGA-AGAGGAACAGGTACAGTACCAGTGGCCATGGCTTTACCTAGAGAAAAGGTTCTTGATCTTATCCCACACGCTACCGAGCGCGAGACTAACTTTATCCGAGAAACTGGGGCGGGCAGGAGGAGATGAGTAGGGAAGGGG--GAGGAGGCACAAAACCAACACAAAAACAGAAACATAAAAGTGAGTTTCAGTAGACAAACTTCCAGAGATGGGG--GGAAAAGAAACCGCaaataaataaataa----ataaataaataaataGGAAGAAAATACACTAGGGGAATGTGATGATGTGAGAAGGGGA--AGGAGAAAGCAGATCCAGGCAGACTTCCCAGAGGAGGTGCCTAGTGTATAGCTCAGGGACAAAAGTATCTGCCTCCTGATCTGTACAAGAAA--GAGAAAATTGCAACCCAGATCTG-TCTTTACCCTCACTGAG----AGTATCTCCCACCCTCCTGCCCCATCTGGCTGTTCTG-CACCCAGTCTCTTCCCACAG-TACAATACCAGACTTTGTGACATTTCTAGGCACTACCACAGTAAGTTCCCTGAAGTCCCCA--CCCTGTACTCACGGGACCCTGGGGGCCCTCTGGTGCTCAAAGGCCATAAGTCCTCGGGCATTGACACTGAGCAGGAGGCTTCGATCTTCTAGCAGGTCAAGGCGGAATGGCTGTGCTGTCAAAATGATTTTGTAGGGTCCCTCAGCCACTGTTAGCTCCACACTGTTGTCATCACGGCCAGAGACTGAAAGCCTAGAGAAGAGAGAGATCAAAGGGGATACACACATATATATATGGAGGCAAAGACCAGAGACCTGTTACAAGCAGCAGCAGGTCA s bosTau2.chr29 32077409 2599 + 45822729 ATGGCCCAGCACGTACATCTG--------GCTCAAGGCCCACTGATCCCTCCCCACGCCT----------GTGCTCTCACCTTCCCAGCAGTGTTGGAGGATATGTCAACCCAGGTCTCTGCAGCGTTGAGCCAGAAGATGCCTAGGTCCCGAAGGGGGCTGTGTGCCAGGAGCACGGGCACAGACCCGTACAGGGCCATGCGGTTGTACAGCTCATACTGGAACACGTCCAAATTATAGAGACGATACGGCTCCCCACCCCTACAGGTAGACAGAC-------AGACCAGCCCTTGACCGTGGTACACACAGGATAAACACTGGCCCCT--------CTG---------------CCCTTTCTCCAAGCAGAAAATCTGACCGCCAAAGGCGCCCTAGGGCATGGGAAGTGATCCAGGCTCATCCGGAGTATCCAATCTGTATGCACATTCCCCACAGCCCTGACTTCTGACCCGTTACCTCCCCCGACCTTGATGTCACTGTGGGACTCACTCAGTGACTTTCAGCCTGAGGTTGTCTGCGTGCTCGGGGATCCCATACACATGCTCCATGCCTGGCAGAGAGAAGTCCAAACTCACAGACGTGGGGCCTGGAAGAGAAGCAAAAGATAAGCTCCGGAGCTGCTGCCTGACAAGGACTCCCTGCACCCCTGCCCAAAGCTCTCCCAGCCCCT-ACCGTAAGGCTTGCTGTCAGAGTGAGTTTTGAACGTCTCTTCCCAGGCTCCCGGCTCATCATGCTCTGGCTTCCCCTGGGTCTCATCTGGCTGGAAGGAGGAAAGTGGACCACTGCCCAATCACACACCAGTTCTCTCTCTTTCCTTGCCTGTTTTCTAAATCCCATCCCTAATGGCAAGACTAAGCTCAAATTTCTTGTGGGCCTTTCCCCTCCGACCTTCCAGCCAGCCCCAT-----GCTCCAACTACCCACCATCACCGACTTGCCTTGTTGTCATCCCCAGGTGTTTCCTCAGGCTGGGCCCCATCGCCCTCAGCTGGTTCTTTTGATCCTTGCCTGGAAGGTAGGAGAGCTGTCTGCTCCAATCCAGAGGGGGCGGGGACGAGGGGCTAGTGGAAGGAGGGGTGAGGGAATAGAGAGCCAAGGGTCCAAAGGAACGAAGGCATTGGAGGAATGGACTGAATGTCAAAGCTTGGAGAGGGACCCCCAGTGAGCAGGTAAGTATGCAGAGGATGGGGAGAGACATGAGAAAGGGAAATGAGAAGGAAATGCCACCTGGAGGTGCCTTCCAAACACAGCCCCA-GCCACCAGCCTCTGCCAGCGTTCCAGAAGAGACAGGCAGGCAGGTTCAAGGGCGTGGGTTCGGAATGCCAGTCCTGGCCCTGCTGCCTCTACC-AAGAGACTCTGGCCCCACCTTCCCTCACTGGGCCTCAGCCTCTTGGGCTGACACACGGGTTTGCAAAGGCAAGTGAGTCACAACCATGGTCAA-ACCTCTACACACGGTCAGGCTTATACGCAGGAACTTAACACAAGAGACTCTGCCAAAGAATG-TTTTCAAGGGCAGCTGGCAAGCAG-TCTGCCCAGGGCCTCAGTGCATGCCAGCTGAGAGCCAGGAACCCCA--GAAACAGGCAGCATCTCTCCACCTTCTGGCAAAGCAAGGAGCTCCCTACACTCCTCAAGTTCGTTCAACATTTCATCTTCCTTCTCCCAGGGGGCTCCCAGCTAGGGGAATGGAGGACAGGAACCAGAGACCATATAGCTGGGGTAAATGGGTGAATGAAGGGAAGGGCATGGAAAAGGTCCGGGGCACCTTCCTTGGGGGCCAGAGTGAAGGGCGGGTAAGGGCAGAAGAACAGATACAGTACCAGTGGTCATGGATTTACCTAGAGAAAACGTTCTTGATCCTATCCCAAATGCTACCGAGCGTGAGACTAACTTTATCCGAGAAACTG----GGGCAGGAGGAGATGGGTAGGGAAGGGGAAAAGGAGGCACAAAACCAACACAAAAACAGAAACATAAAAGTGAGTTTCAGTCGACAAACTTCCAGAGATGGGGCAGGGGaagaaataaaaaacaaaaaacaaaaaccaaaaaccaaaaaaaagaaagaaaataaaTCTGGGAAGTGTGATGGTGTGAGAGGGGGAAGAGGGAAAGGCAGATCTAGGCAGGCCTCCCCGAGGAGGTGCCCAGGGTACAGACAATGGACAATGAGA-CTGCCTCCTGGTCTGTACAGGACATGGAGAAAACATCGAGCCAGGTCTGCTTCCTACCCTCCCTGCTGGTCAGTTTCTCCCAGCCCCAGCCCCCACCTGGCTGCACCGCCACCTCATCTCCTCCCAGGGCCCCAGTGCCAGACCCCTCAACACCTCTAGGTTCTTTCACACTAGGTCTCCTTCAGTGCTTGACCCCTGTACTCACGAGACCCTGGGGGTCCTCTGGTGCTCTAAATTTAAGAGTCCTCGGGCATTGACACTGAGCAGAAGGCTGCGGTCCTCCAGCAGGTCAAGGCGGAATGGCCGTGCCGTCAAGATGATTTTATAGGGTCCCTCGGCAACAGTGAGCTCCACACTGTTGTCATCCCGGCCAGAGACAGACAGCCTAG----GAAAGAGATCAAAAAGGATCTAAGGACATGCA---GAGGGCCAAGAGTAG----CCATGACACTTAGAAGAAGGGCA a score=13065 s mm7.chr19_random 1409538 342 + 2598976 CACCTGTCT-GCTGAGTGAATATGGAGTGAGAGGAAGTAAGACAGAGGAAGAAGAGAAGCGGGGT---GGGCTGGAAGATGAGGCTCG---ACTTCTCTGATGCGAGAAACTAGGTTACCACCCA------GATTCCTTGGGAAGGA--AAAGGGCAATCAGAGAGATACCT-----TCTCGGGAAAACGTTACCTAGCTGTGGGGGGGTCAGCCACTAAAACATCTGGCACTCGGTATCGAGGCCGCCGGGGCTCTAGCTCATCGATCCTGATCCGAGTCATGTTCTTCTGAAGGCCCTGGAGCTCCAGCACAAGCAGCACCTGCAGAAAGAGAAACTCGCCTGAAGCTGGAGAGACTAAA s bosTau2.chr29 32082283 355 + 45822729 cacCTGGCTCAGTCAGTCAATCAACAGAGAAAACAACTGAAACAAAGGAAGAGATGAAGGGAGGTTGAGAGCAGCAAGGTGCTACTCATTTATCATTCCAACGTGGAAGAGAAAGTCAGCCGCCAAATGAAGGTTCCTTAGGAAGGACGAAAGGGC---CATGGAGATGGCTATGTTTCTCAGGGGAAATTTACCCAGCTGTGGGGGGATCGGCCACCAGCACATCCGGCACACGGTATCGGGGCCTCCGGGGCTCGAGTTCATCGATCCTGATGCGAGTCATGTTCTTCTGAAGTCCCTGGAGCTCCAGCACCAGCACCACCTGTGGGGGCAGAG----GTCAGGGAGTGGAGAAAGGAAA a score=30863 s mm7.chr19_random 1412033 1123 + 2598976 aaagtaaaAGTCTCAAGATAAGCCTGACACAAGACATTTATTTACAAGTTTTTCTTTCCCAAGTTACCAC---CCATTTCCCCATCCCTACC--ACTCTTTCTTGTCTTGCCTGACCTTGGTGACTTCATGGATCAGATGGACTGTAAGAGCATCAGGACCAAGCTGCAGAGTGTCCAGCAAGGCACGGTAAGGAGAGAGGCCTGGCCGAATGCTTCGCTGCCGTCTGTCAAATGCAAGAGTTGGGAAGTAAGGTTAGAGAGCATCTCAATATCCTTAGGTGACTCTACTTAAAATTATCTTTC-TTACACAGCCCACCTCACCTCCCACACACACCTCCCAGGTCCCCACTTTCCATTCACCTCTTCTAGAAA---CATACTTGCAAAAGGAACTCTCATCACAGGTCTTAAAGTTGCTTCTATCCACAGCAAGTGTAATCCCCAGACAGACCCCTAAGTATGCCAGCACCAAACTTAACCAAGACCTATGGAAAGACAAGAA-GAACAGTTAACACTC------TGGTCAAGAAGGGCTTCACCTTCTTGATATAACCCTAACAGACAACTCATAAAAGCAATCCTATTAATTAGGAAAAAAGCCAAGTAGACCAAGAACGAAGTCAATTCTGAGTgggaatggcggagcacatttctaaccccagcactcggattcgagaagcagaggcagggcagatctctatgaatttgaggtcagtctggtctatacagtaaattccaggtcaacccagactatacagtgagatcctgtctcaaaggaaAATTTTTTTAAAGAAAAAGAAAAGTTAGTCTTGAAGAGATGGTTTGTTCACACTGTCCCTGAAAAAACAACCCAAGAGTAAGTGGACAAAGTCTGTCTGTGTGGCCTTTAGAGGCCGAGTACTGACTGTAGTTACATCAGCCTCTCAGAGGAAAGGAGCAGTAACAGCCAATCCCAAAGGAAATGGT-GTACCATGTGTGTACATCACAAGAACAAAGCTAA-CTATGCCTTT-CAGGGGTAAGTCATCAGATGGAGT--------------------------------CAATCTGCTAATCACAACTCCTAAGGTCCTAG-------AACG--CTAGACACCCAGTTCCTTTGATGTACAGTTCTGCAACTTCAAAACAAATCACCATCATCACTA s bosTau2.chr29 32082737 995 + 45822729 AAAGTAAAAGTCCCACAGTTAGA-TGGCATGGGATGTGGGCC-ATAGGTTTCCCCTTCCCCAATTCCCCCTGGCTATTTCTCCACCCCCATCTGACTCTTCCTTTTCTCCCCTGACCTTGGTGACTTCGTTGATCAGATGGACTGTGAGCGCATCAGGACCAAGCTGCAGAGAGTCCAGTAAGGCTCGGTAGGGGGAATGGCCTGGCCGTATGCTTCGCTGCCTCCTGTCAAGTGAAACAATTGAGAAG-GGGGT----GGGCTTCCCCAAGGCCCTAAGTCCTTCC-------ATCAGCTGCAGTGACCCACGCTACCTCACCTGCCAGACACCTCCCACATTACCCTACTTTCCATTCCAGTCTCCCAGAAATATCATACTTGCAGAAGGAACTCTCTTCACAGGTCTTAAAGTTGCTTCTATCCACAGCAAAGGTAATTCCCAGACAGACCCCTAAACAGGCCAGTACCAAAGCGGTCCAAGACCTA--GAAGGAAAAGGATGACCAGGGAATAATCAGAGCAGGGTCAGAAAGGGCCCCACTT-----------------CAGA----------------------------------------------------------------------------GGTGAAGGCCTTTCCCCACCACAACCCT--------AAAAGGGGAGCAAGGTAAGACTCCCA---------------------CTAAACAGCAAAAG--AAGGCAAACTGGA-------------------CCCAGGGTTAAGT--------------------GTAAGGCCTGAGGAGTTGGCTCACTCACACCTTCCCTTCAAAAG-----GCAGAGGAAGTGGACAAAGGATCCC----TGGCCTTCAGAGGCCAGGTATTGACTCAGGTTACATCAGCCTCTCAGAGGAAAGGCACAGTAACAGCCAATCCCAGGGGAGGTGGTAGTATCATACGTGTAGAACAGAGAAACAAAGTCAAGCCATGCCTTTCCATGGGCAAGACGCTAGGGGGAGTGACAGTGAAAAAGTTACAGATGTACCCTCAGCTAGCCTGCTGGCCACACTTCCTGGGGTCCTAACATCCCTAACGCTCTAATCATCGTGCTCCTCAGACCTCCACTCCTGTATCTTTGACATAAGTCACCACTATCACCA a score=5879 s mm7.chr19_random 1413462 351 + 2598976 GTAACCAAGACTCAAAACTA---CTTTCCATACATTTATTTTCCCCCTTTCTTTCATTGTTTTTCTTAGTCAGGTTAGGTCAGGAGGTTTTTTCCAGATGGA-AAATTCAGCCATACAGGA----ATAAT-CAGCCATGACTTTTGAACAGCTACGCAGAGGTGAAGAGCCTGGAGCTTAGCCCTGACTGTGGCTACGAC-CATGACTTCCACACAGTGCACAGCACAGCACACTGATCGTCAGCAAAGCAGAGCAGACGTGCTAAACTGAAGAGCCTCACATCCAGGTCCCCACAAACT-GTCACTCCCACAAGGTGC-ATCAAATGAAAGACTATGGTTTAGTAACCTCATTTAAGTAAGT s bosTau2.chr29 32084352 333 + 45822729 GCAACCAGTGTTCAGAACCAAACTTTTTTATGCACTAA--------CTCTTTTCCCTTTGTTTTCTTGGTGAAGGTAGGATTGGAA-TTGATCTcagatgggtacattgagacataaaagattcaataattcatccaagact---gaacagt---------atgaggcgccagcgggattgaacAGTGTGTGACCCCGGGGCTCAGGTACTGCACGATGTACAGCACGGTGCACCAACCACCAGCAGGGCC---------TGCCTCACTGAGGACCGTCCCCCTAAGGTTACTACAAACCCGCCACTTCCCCAACATGCCATCAAGTGACAGACAAGGGACTAACAGGCTTATTTAAGCAAGT a score=2508 s mm7.chr19_random 1414056 46 + 2598976 CTAAATGATTCCTAAAAAGGGACTCTCAGATTTTAGTGTCTGTTAA s bosTau2.chr29 32084712 46 + 45822729 CTGAGTACATCCTAAACAGGCATTCTCCAACTTTAGTGTCTGTTAA a score=287201 s mm7.chr19_random 1415449 5284 + 2598976 AGTTAATAAAGTTCCCTAGAAGCAGGAAATTTTGGAAAGCTGGCAGGCAGCCACCAGTAGTGAAAAAAGG-----------------CAGCCAGCAAAGTGAGA-AAACACTAGGAACTA--GCGTGCTAGGCTTTGGAGGAAGAAGTACCTGTAAGACAAACAGAAGACAATGCTACTAGAAAAATC-------------------------------------TAATCAGAAGGCATTG----ATACAGCCTGGGTCCTGAGGAATGGCTACTTATGTA------------GCGGTAGTGAGCAGTTTAGCTCGT-----AAATACTCCCTGGAACCCTATCTTCAA-GTCTTTAAAATAGGTTTGGAGAGATGTCAGTAAGGAAATGATTGGTAAAGAATATTTTCAACATGACTTGTTGG----CTCTA--------GGAATGCCTTAAGCATCCC-AAACGAGAGGTGTTCATGAGCTAAGTC-AAGTATGAACTTTAGGGTAAGTTACATCTGTTTATTGGAGAAGAAC-------TTGAGTATATGATTCACCCT------TTTTACACTGCTGTCGACAGTACACGCCTCTCCCGACCCTT-TACATCCGTTAGGT----GTACCGCGCTTTACGGCGCTGATGTGTT--TTCAAGCTTTTTTTAAGGTTCTACAAAACTCCAGAGAAC--AGGCCAAATTATTTGATACATGTTGTGTTTGAGCAACATTATCCATGCAGACTGTGAACTTACTGGACCCTGCCCCAGCCGTGCCCAGCAA--ATGAACACTAATGAAACT------------------------------------GGCCCAGGCTGGTCGGGAG---GGCAAGGAAGGAATACAGGACGATCTGCCCATCGTATTGCTTCCAACCTGAAAAAGGAGCAGTGTGGCAACAGGCTGCTTTTTTACAGGCTGGGATGCATTTCGTCCCCCTACCTGCCTCGACAGCCCTGCGCACTGCAGGAAGGAGACGAAAGCATTGACCACCCCGAACCGCCAAGGGAGAAGGGGCGGCTGGGAGCGGACAAGACCGAAGACAGCACCCAGCTTCAGCCTTTCTAAGCC--CGGCGAGATTCAGGAACCCCACAGACAAGGG--CCGCAGCGACTCGTGAATCTGCCGCTGGGAGGCTG---TAGCCAGAGGCCACCACCACGAGGACAAAGAGCCCGTTGCGAGGCCAGAAGTAGCAGGGTGATGGGAAGGCATACAAAAAGAAGCAATATGGGGCTCGGGGGATCTAGGGCCGTCCGGACGCGCCCCCGGGTTCCGGGCTCCTCACCGCCTCCTACGCGCCGCCACTGCCGCTATTGCCGCCATCTTGTACCGGGTTTGCTCCTTGACCCGAACCTACCCG--CCCCTGTGCACGTTGAGCCACGTACCCTAGTGCCCGCCCCTTCCGGCCTTCCGATTGGCTCGTCCAGAGCGCGGCCGGACGTCTATCCCATTGGTCGAGCGCGTTCTTTATTATGAATG------------------GGGCGTGCCTCGACG-------------CCCCGGGCTCTGCGTTCTCAGGCTTTTGGC-AGCTTTCCGTGTCAGATAGAAACACTGGAC--TGTTTGTCTCAACTCGGCAAATTTTATTTAGAAAAAATGGTGGGGTTTGAAAAAAGTGACACCACTCATT--ACGTACGGACTTAGAAG------CATCCACCCTTCTGTAGCACCTTAGGCTCTTCTCTCA--GTTTAACCTCGCACAACTTGTAGAG----AAAAGGTCAAGTCCCCTGCCGAAGCAGAGTGGATGGCGGAGGTGCTTGAAAGCGGCCAGAGAAGAGCCCCAGGCGATCGATGTTGCGGTGGAGGACACTGTGCAGCACAGACAGATGTGGTCCTCCTTCAGCTCCACCCTCCCTGGCAAAGTCCCGGATGAAGCGGCCACGTTCAGACTGGAAGATGAACTTCTGGGGCAAGGGCCCATGCTCCCGAAGAAAACCCCAGACACTAAGCAGCAACAGACGCACTTCAAAAGGTGCCAGTTGGCTAAATACCTCGTGCATATTACCCAGGGCTGGTGGCAAGAGGCTTCCCTCAGCCATGACAGCCACCAGGATACAGGATGCCTCCAGATGCCAGGGGGAGTGGGTTGTATCAGGGTGTCGAGAGGCTTCCCAATGGCTCAAGAGGGCAGCCAGCAGCCCCCGCAGCAGCACGGAGCAGTAGCACAGGGCTGGGGGAGCAGCTGCTACCAGCTTCAAAAGCTCAAACAGCAGAGGTTGTTCCCGGAAGCGCCTACCAATTCGGAGATCCCGCTCCACGGTGGCTCGTGCATGATCCTCTGGGGGCCAGGCCAGCTCAGCACCAGCTGCATCAGGACACACGCTCTCCACTAAGGTCACCGCAACTGCTTTGGCTGCCTCTGGGCTCAGGGTGGGAGCCCCCCAGCAACCCTCACGCTCGCTGTTCCCTGATGCGCTGCAGCAGTGCACTAGGAGGCTAACGAGGCTCTGGGTGTTATAGATCACTTCTTGATGGTTTCGAGATTGAACAATTTTAGGTGGCTTTAAGCCACGGCCGATAACTCCAGCATGGAAAACTGACCAGATCCCTCCAGGACCCGGCACTGCTGCAGTATGCCTCCGGTTAATGTCCAACAATGAGGCAGAAGCCAAAGGGGTTGAGACAATTGAGAGGGTCTCATTGTCTCCATCCATTTCCCCTCCAAATAGTTCTGTGTTGCCCCGATGTAAGGCTCCCTCTACAAGCAGCTGTAGGACAGCCTTGAGCCCAGCTGGGGAAGTCTGAGAAAGGCGGGTAAGAAGCTGAGAGGCTGAAGCCACACCAGGAGGGCCATGCAGCCTTAGAGAAGAGAAGAAGTGGTGTACTCCAGCTCTCACTAGTCCCAATAGTTGGGAAGGGGACAGGGCTTCAGAAGGAAAGGGACATATTGCAAGGAGGGAGGCAGCAGCTTCAGCTACTTCCTCCTCTGGGTGTAGTAGGAGAGGAGCCAGATCAGCCAGGTGAGCTGAGGCAGACTCCCCAAACCGGGCCCCTAAGGCTGAAGGGCCCTCACCACCCTGCTGCTCCCACCCCACCAACAAGGCCAAATTTCGAAGAAACCGGGCTGTGAAGGGAGGCTGTAAAGTCCCTGCATGCACTCGAGCCAGGCAGCTTCGGAAGGCCAGGGGAAGAAGGCCAGAGAGACTGACCACTAGCCCTGCATATAGCTGGGTTGCCAAACTCAACTCTTCAGGGCTTCTGGCTCTGCTCAGTAGATGACCCAAGGCCTCAGGTCCACAGCTAGGTCGTGTATAGACAGACAGTAGGCCCAGGAGCTGGTGTTGCCAGAGGAAGCGCTTCCGTTCTAGCCGTAATGTCTCTCCACACAGTTCTCCAACATGGTTTCGTAATGCATCAAGAAAGGGCACTGGACGAGGAGGTGGGGGTGGGCCCAGCACCCCTTCTCCAGGAGACCCTCCCCGATGATGAACTAGTTTTTGTAGATGTAGCAATAGCAGCTGGATCAGCCGGTCACAGGCCTCTCTCACGGTGTCTGGCACAGCCAGGCCCTGGGTAGTAATAACTGAAGCAGGCATAGCTGTGTCTACTAAGAACTGCAGCAGGCGGTAGGCACCAGTCCCAGAGGCCTGGCTCACTAGATGCACAGCCAGGTTTAGCATGTTGTCTAGCTCTTCTCTGGGGAACCCCTGCAGGTGTTGTTGCAGCTGGCTTAGCACTGCTGGGGGCTTGAGGCAGTCCACAAGTTCTCCAGATACTGTGCCGAGCAAAGCTGGTGACATGACTGCCAGCTGCAGTAGGAAGGGAACTGTGGCCTGAAGAGAGGGCTCTCCATTCCGGCCCCCAGAACCCCCTGCCAAACTATCATGAAACATGCGCAACAGTTCCCGTCGGATGCTGTCTCCATGGCGGGAAGCCAGGTGCCCTAGGATGCCTACAACTGAGGCAATCTTGGGTACCCGTTTTTCCCCAGGGATGGCAGGAGATCCAGGGAAGGGGTCTGTAGAGGGGGGTTGAGAAGAGTTTCCACAA---GCACTAGCTCCTCCTCCAGCCCCACTATGGACACAGAAGTCCTTAAGGCCACAAGATAGGACTCGGGAGATGATGGTGCCAGGAAAAGAAGAGCCAATATGGGCCACAACCCAGTCAAAGTGTGGGGAATGCTGGACAGAAGTGTCTAGCAAGGCATCCACACATGCATCTGGGCAGCTACCAATGAGGGCCGAGAGGCACTGCACATAGATGTCCATTAATGTGCGGGTGGCCCTGCAGCCCATCCACAGCTGCAGCAGTTCATTGAGAGAGCCAGTGGCATGGGGAACACGCTGATGCTGACCTGAATATGTGCTGCTCAGTTGTCCCATGAGGTCAATGGACCATGCACTAATCACGGGTGCCCAGGCCTTTGGGTTGGCCCGGATAAACTCACACAGCACCTGCTGCACTTCATGCACCACATCCTCTAAGCCAGGTCCACCAGTAGGGACATGGGATGGTGGAGGTGGACGGAGGTGAGGTGGACCAGCCACAGGACTTTCTTCTAGGGCAGCTAGGTGGGCCCGGACACTCTCATCAAAAACACCTCTCAAGTGGTCCAACACAGCAGCCCGAGCAGGTGGCAAAGAACGGAGCAAGAGAAGACCACATCGAGCATGTTCACGAGCTGAGAGCTGGTGGCCCAGAATAGGGTCTACACCGGTCAAAAAAGCCTTGATTTCTTGGGACAGCTCCTGAGCACTGTAAGGAAGAAAAAAAAAAAGAAAATCAAAATACTGGGAGATGTGAAGTAAGTTATATTCCTTTCATGAGCTCTGGTTTCTTTTTATGTGATAATAGGGTAAT---ACGTGCCTCATAAGAATTTATGAAGGTTTAGAAGCATACCCATTCCTGTTACACCTTGGTCATTCAAGAAATGCTATTTGTCCTTCAGCAACAATAATCATAGGAATAACAGATTACCTTTCAAATATCCACGTTCTTTTTTCTTTTTCAGTACGAGGTATAAAACCTAGGCCTTTAGGCCTACTAGGCACCATCTCTTAAGCTACATCCCCACCCCACttttaagtacttcaccagtactttttcagtcctgacaacaatatggt-----------tattatgatcccattttacaggtaaagaaattaaagttaagaaatcaggataaataTTACAAAGAGGCAGGAACCATTTCTAAACTCCT-AAAACAGAATTCCCTTTTGTT-AAGGTGATGGTATATGGGAATTACTCAATGAAAAATTGAATTAGCTAAATATA--TTGAGATTCTAT---ACCTACTTTA---ACATCTTCTCAGC-----------CCCCCCTC--TACAGCACAAGCACCCTGAAAT---CTCTCAATGGTCAGAAAACTGTAA-------------CCTTACTAAAAGCTCTCCCTCCCAAATGTGTGCTTTTCCATACTATTCAAGAATTCAGCCTTAACCAgtgacatacaccttcaattccaacaca s bosTau2.chr29 32084979 5396 + 45822729 AGGTAAAGAAATTCACCAGGA--AGGAGATTATGGAACA-GAGTAAGC--CCTCCAGTTCCAGAAGAAAGGGCAAAGCATACCAGGCCAGACAGAAAGGTGAGGGAAACACCAGGCTTTGTGGTTTAATAGGCCAAGCAGGAACAAGGAGCAGCAAAACAAGCAGAAGA-AATGCTCCCAGAAAACTCAAAAGCAAGGCATGTGCGGCCCCTCACCCCCACACCACAAACAGGAGTGACTGCAGCAGACACTCTGAGCC------ACTGACCCCATGTCTATACCGGCCCAAGGCAGAAGCAAGCA--TAAGTACGTGAGTTAAATACTTTCTGGAGTCTTATTTGCAACATCTATAAAATGGGTTTGGAGAGATGCCAATGTGGATAGGATTTCTGAAGATT-TTTCAGATGTAACCTGTTGGAAGGCCCTAAGAACTCCGGAAGGCCTCGAACGCCTCTGAGCAAGAGGTGGTCACAAGTCAAGTTTAGGAATGAGTCGCAGGGAAAGGTGCACCCGTTTATTGTTTCAGATCACAGGTTTCCAGAATAGGATTTCCGATCCATGCTTTTCCACTGCTGCCAACAGTACACGCCTCTCCCCACCCTAATACATCCGTTAGATCCTGGTAA-ATACTTTGTGGCACTGATTGACTGTTTCAAGCCGTTTTTTCCGTAATATTAA---CTAGAGAACGCAGACCAAATCATT--------GTTGTGTTTCAGCAACATCGTCCAGGTCGACTGTTAACTTACGAGATCCTGCCCCAGCCATGCCCAACGACCGTGAACACCGAACAAGCCAGGGATGGTGTCCACGTGAAGACCAGGGCAGGGCAGGGTCCGGGCCTCTCGAGAGAAGGGCAAGGGCAGTGGAAAGCAACA-CTGCCGGCTACGGTGCTTCCAGCCCGGCTGGGG-GCCGCAGGGCAGCAGGCTGCATTCCCGGAGGCCTGGCCGCGTCTCGTCCCCC-----GCCCCGACGGCCCCGCGCATTGCAGGAAAGAGGTGGCAGCGTTAACCGCCGCAATCCGCCAGGGAGG--GCGGCGGCTGAGAGCGGCCCAGACCAAGAAAAACGCACGGCTGCGGCCTTCTAAAGCCACCGG------TCCGGAGCCCCAGAAATAAGGGGCCCCCAACGCCGCGCGGATCTAATGCGAGGAGGCTGGGGCAACCTGAGGCCAGCTCCAGAGAAACAAAGAGTCC-TCACGAGGCCGGGGATGGCGGAGTCTCAGGATAACATAAAGAAAGGAAAGATACGGGATTTAGGGGCTTGGGGGCGTCCCGTGCGCGCCCCCGGGATCCGAGCTCCTCACCGCCTCCTACGCGCCTCCACTGCCGCTATCGCCGCCATCTTGTGCCGGGTTTGCTCCTTGACCCGGAGCTTCCCCTCCCCCAGCGCGCGTTGAGCCACGTATCTTAGCGCCCGCCCCTTCCGGCCTCCTGATTGGCCCGACCGCACAGAGGCCGGGCGTTTGTCCCATTGGCGGAAGGAGGG--TTACGCTAAATGCTCATGGGGGCGGTGCCAGGGCGGAGCTTGAGGGAGGGGGCGGGATTGTTGAGCCAGGCGCTGTCCGACTT--GGCTGGTCCTAAACATCAGACAGAAGCACTGAACCCTGTTTTTCTCAACTTGGCAAATTTTATTTAGAAAAAAGGGTGGGGAG-GAAGAAAGTGACAGCGCTCTTTTAAGCCAAGGTCTTAGAAGAGAAACCTCCCACCTTTCTGCAGCACCTTGGCCCCCTCTCTCATGGCTCAACCTCCCTCGGCTTCTGGAGCATGGAAAGGCTATGTGCCCTGCCGGAG---AGTGGACGGTAAAGGTGCCTGGAAACGGCCAGAGAAGAGGCCCAGGCGGTCAATGTTGCGGTGGAGGACACTGTGCAGCACAGCCAGATGGGGTCCACCTTCACCCCCACCCTCCCTAGAGAAGTCCCGGATGAAGCGACCACGCTCCGACTGGAAGATGAACTTCTGGGGCAAGGGCCCATGCTCCCGGAGAAAGCCCCAGACACTGAGCAGCAGCAGACGCACTTCAAAAGGTGCCAGTTGACTAAATACCTCGTGCATATTCCCCAGGGCTGGTGGCAGGAGGCTTCCCTCAGCCATGACAGCCACCAAGGTGCAGGATGCCTCCAGGTGCCAGGGGGAATGGGTTGTGTCAGGGTGGCGAGAGGCTTCCCAGTGGCCCAAGAGGGCAGCCAGCAGCCCCCGCAGCAGCACAGAGCAGTAGCACAGGGCTGGGGGAGCAGCTGCTACCAACTTTAGCAGCTCAAAGAGCAGAGGCTGTTCCCGGAAGCGCCTACCAATGCGGAGATCCCGCTCCACAGTGGCCCGGGCATGCTCCTCAGGAGGCCAGGCTAGCTCTGCACCGGCTGCATCAGGACACACACTCTCCACCAAAGTCACTGCCACTGCTTTGGCTGCCTCTGGGCTCAGGGTGGAAGCCCCCCAGCAGGCTACACATTCAGTACCCCCAGGGGCACTGCAGCAGTGCACCAGGAGGCTGAGGAGGCTCTGGGTGTTGTAGATAACTTCTTGCTGATTGCGTGACTGGACAAACTTGGGTGGTTTAAGGCCACGACCAATGACTCCAGCGTGGAACACAGACCAAATCCCTCCAGGACCTGGTACAGCTGCAGTGTGCCGCCGGTTTGTGTCCAACAGGGAGGCAGACGCCAAAGGAGCTGTCACAATGGAGAGAGTCTCATTGTCCCCATCCACTTCCCCTCCAAATAGTTCTGTGTTGCCACGATGTAAGGCTCCCTCAACTAGCAGCTGCAGCACAGCTTTGAGCCCCGCCGGGCAGGTCTGGGAGAGGCGCAGAAGAAGCTGGGAGGCGGAAGCCACCCCTGGGGGGCCGTGCAGCCTCAGAGAGGCAAAGAAGCGATGCACTCCAGCTCTCACCAGTCCCAAGAGTTGGGAAGGGGACAGGGCTTCTGGGGGGAAGGGACAAATGGCCAGGAGGGAGGCAGCGGCTTCGGCTACTTCCTCCTCAGGATGGAGCAAGAGAGGAGCCAGGTCAGACAGATGAGCTGAGGCGGACTCCCCGAACCGGGCCCCTAGGGCCGCAGGACCCTCACCACCTTGCTGCTCCCACCCCACAAGCAGCGCCAAGTTTCGCAGGAACCGGGCTGTGAAGGGAGGTTGCAAAGTTCCTGCATGTACCCTAGCCAGGCAGCTTCGGAAGGCCAGGGGCAGGAGGCCAGAGAGACTGACCACCAGCCCAGCATATAACTGAGTAGCCAGACTCAACTCTTCAGGGCTTCGGGCCCGGCTCAGGAGGTGGCCCAAGGCCTCAGGTCCACAGCTAGGCCGGGTATAGACGGAGAGCAGGCCGAGGAGCTGGTGTTGCCAGAGGAAGCGTTTCCGTTCCAAACGTAGCGTCTCTCCACACAGCTCTCCAACGTGGTTTCTGAGCGCATCTAGAAAGGGCACGGGGCGGGGGGGTGGGGGTGAGCTCAACAACCCCTCCCCTAGAGACGGTCCCCAGTGATGAACCAGTTTTTGCAGGTGCAGCAGCAGCAGCTGGATCAGCCGGTCACACGCCTCGCGTACAGTGTCTGGCACAGCCAGGCCCTGGGTGGTAATGACAGAGGCAGGCATGGCTGTGTCCACCAGGAACTGCAACAGGCGGTAGGCACCTGCCCCAGAGGCCTGGCTCACCAGGTGCACAGCCAGGTTCAGCATGTTGTCCAACTCCTCTCGGGGAAATCCCTGCAAGTGTTGCTGCAGTTGACTCAGCACGGCTGGGGGCTTAAGGCAGTCTACCAGTTCTCCAGAGACTGTGCCCAGCAAAGCTGGTGACATGACTGCTAGCTGCAGGAGGAAGGGAACTGTGGCCTGAAGGGAGGGGTCCCCACTCCGGCCACCAGTGCCCCCTGCCAGACTATCGTGGAACATTCGGAGGAGCTCTCGTCGGATGCTGTCTCCATGCCTGGAGGCCAGGTGCCCTAGGATGCCTACAACTGAGGCAATCTTGGGCACCCGTTTCTCCCCAGGGATGGCAGGAGATCCAGGGAAGGGGTCTGCAGAGGGAGTTTGAGAGGAGCCTCCACCACTGCCACCAGCTCCACTTCCAGCCCCACCATGAACGCAGAAGTCCTTAAGGCCACAGGAGAGAACTCGAGAGATGATGGTGCCGGGAAAAGAGGAGCCAATATGTGCCACAACCCAGTCGAAGTGTGGGGAATGCTGGACGGAGGTATCCAGCAAGGCATCCACACAGGCATCTGGGCAACTGCCAATGAGAGCCGAGAGGCACTGAACATAGATGTCCATCAATGTGCGTGTGGCCCGACAGCCCATCCACAGCTGCAGCAATTCATTGAGAGACCCAGTGGCATGGGGCACACGCTGGTGCTGGCCCGAGTAAGTGCTGCTCAGCTGCCCCATGAGGTCAATGGACCATGCACTAATCACAGGTGCCCAGGCCTTCGGGTTGGCCCGGATGAACTCAGACAGCACCTGCTGCACTTCCTGCACCACATCCTCTAGACCAGGACCCCCAGCAGGGACATGGGAAGGTGGGGGTGGACGGAGGTGAGGTGGGCCAGCCACGGGGCTTTCATCCAGGGTAGCCAGGTGGGCCCGGACACTCTCATCGAAGACACCTCGCAAGTGGTCAAGCACGGCAGCCCGAGCAGGTGGCAAAGAGCGGAGCAGGAGAAGGCCACAGCGAGCGTGCTCCCTAGCAGAGAGCTGGTGGCCCAGAACAGGGTCTACACCAGTCAGAAAAGCCTTAATTTCCTGGGACAGCTCCTGAGCACTGTAAGGAAGCAAAAAAAGCAG--AGTGAGAGtgttggaagatgtagaacaagttacattccctctgtgagcttcagtatttttctatgtaaaatagggataactgaacctccctcataatg--ttCACAAAGTATGGAAGCA---CCATATCTAGTTCACACTAATTAATAAATGCAAGCTGTTTTTCTTTTaataacaaca-------gaa-----------------------------------------tcagtattaggt---------------------------------aactcctggaatagat--caagttctcttttaagtactttacgtgtattatttcaatgcaggtaacaacccagtaaggtaggtaccattatgatcccattttacagagaaggaaaccaaggTTAAATAATCAgactctaaactccaagagggtagttaacagttctctgctcttcaacactgaatccccttctcctggagcccctggaatatgggaaat----aataattcgttgaattgagtaagtATATTTTGTGTTCCTATAACATCTGCCTTAAACACACCTTTTCAGCTTTACAGCACTCCCCCCTCCATACAACTCAAGTACCCTGGATTTTGCCCTTAATGGAAAGAAAATTCTAAGCCCAAATTTGCCCTTCATTAAGGGCTCTTCCTCCCCAAACT---TCTTTCCATATTCTGCAAGCA-----CCCTAACC----ACCCACCACTTGGACTCCACCACA a score=30331 s mm7.chr19_random 1421045 876 + 2598976 AATGCCTTCAGTGTGCAGAGAATGGGGGTGGGGGATCCCCCGGAGCACAGAATATAAGCCTTTCAATTCGCCC---AATATATAAGCTGTGTCTTAAGAGTCTCAGAAGGCGATGTT----GAGAAAGTAAAACCCCTTCCCTCTTACTACTATCTGTTCTGTCAAACACAACCGCATTCTCT--GGGCAGATAAGGTT---CTGTACCCTCCCTTT------------GATCAAAAATAAAGGCACCTCAAT-------------------------------------ACGAGAACAAATATTGCGG----CTCCGAGCCTTGGCTCCCCAGAAACTCTCATGTAGTCCAAGCCTCCT-------CCCG----TAAAAGGGGCAAGGAGGCTGGGTTCTCAGGAGCGCTGATGTCCCCAACTGCTGGCAAAGCAAGGCCGGCCGAAGAAG-------GCACTGAGGTCTCGGGAGAGGCAGAACTACGA-----GCAGGGCAGGCATTGCAGCCCAGAGTTTTTAGTGAAGCGGTCCCTGAGTTCCGGGAAGACGCGACCA-GAATCTCTGAGAATCCTGACGCGGGTTCTCTAGGTAAGATCCAGCTTTCTGAGGAGAAGGCTG---------GCGGGGCGGCGCGATGAAGGAAGATACCAGGGGCTCTGACTACCTGAGAGGCGCGGGACCGTGGGTGGCGGGGGCAGGCCCGGGTGGCCCTGGGGCCCCGGGAGGGTCGCACAACGCGGACATCCCGGAGCCCTACCCGGAGCCTGAGGCGGGAGCGGCGGAGCACAGGCGACGCATGCGTGCTGACTGGAAACGCGACAGAAACTATCGACCCCGCCTCTCAGGAAAATCCGTCCGGCTAAGTCTGGAGCCCTAGTACTTTGGTTCCGC------------------------GTCGCATCGGTCACAGCGGGTAATAGGCTTGCTCTCAGCACAACCTTCACACCCACCCCCCAGGGGCT s bosTau2.chr29 32090446 941 + 45822729 AATGCCTTC----------------------------------------------CAGCCCTTC---CCACCCTAAAACATATGGGTTCAGTCCTAAGAGGTTCAGGAGGCAGTATCATGGGAAGAGACAAAATTCCCTTCCTCTTTGTGAG---TTTTCTGCCAAAGAAGACAGCATCCTCTAGAGACTGGTAAGCTCTGACTGTGCCATTCCTCTCTGGTTCCTCCAAAACAAAAACCAAAACCACTCAACGGTGAGGGGAGTGTCTCCGTTGGAAGGCGAGGGAAAGGCTAGAAAGCATTCTGTGGGATTCTGGGGGCCTGGGTGCTCAGGGAGTCCCCATGAAGTCAGGGGACTCTGCGTTAGCTCGGGTCTAAAAAGGACAGGGCACCCGGGTTCCCAAGA--ATTGATACTCCCAACTCTTGGAAAAGCAAGGCCAGGATAGGGGGTAACTATACACTGGGCTTTAGAGGGAGGCAGTACCGAGACCTTGGGAGTGCGGGCACTGGAGCCCAGAG-TTTTGGTGAGTCAGTCCCTGAGTTCGGGGAAGACCGGACCAGGAATCTCTGAGAACCCCGACGCGAGTTCTCGAGGTAGGATCCGGGTTTCTGCCGAGAAAGCTGGGGATCGGCGCGGGACCGCGTGGGAGGGAAAGATGCCAGGGGCTCTGACTACCTGAGCGGCGCGGGACCGTGAGTGACCGGGGCAGGCCCGGGAGGCCCTGGGGCCCCGGGAGGGTCGCACAACGCAGACATCCCGGAGCCCTAGACCAAGCCTGAGGCGGGAGCGGCGGAGCGCAGGGAGCGCATGCGCGCTGACTGGAAACCCGAAAGGAACCAGCGAAAAGGCTTCTCAAGAAAACCCATCCGGCGCTGTTCGTGACCCTCACACATTGGTTCCGCTTTGAGTCGGCGTCCCAGTTAGAGGCTGCGTCGGTAACAGCGGGAAGTCGACCCACCTTCTACGCAACCTT--TCTCCACCCTCCCGCGCCT a score=15831 s mm7.chr19_random 1423923 576 + 2598976 TAGCTTCTTGTCGCCTTTGTT-------GCACAATGTGTCCTTCTTCTGAAGTGTCTC-CACCCACACGCAAAGGCCTTTCTACATGGCTCATCCC---TGCTGCACTTCATCCCACACG-----GTGAACGCACTAAAGCTTTATTACAAAAGGAGTTGACTGCT-AGAGGTGGCCCTCCAGTCTTTCTCTGTGTCCTCTTCGGTCCCAATATACACCTCCAGGGGAGGTCAG-GGTCCGCTGTAGAAGAGGTGT-CTAGGAAAGTGAAATATGCTAATATTTTTTCCAAAGTT-----------CCTCCAAATCTTTCTCAGTGCTG-TTGACCATCTTCTGGTAGAAGAGGCA-GGGATT-----TTAGCTCTTATCTTCAAGATCCTCCATAGCTACGTCCTGGGGAGCTTTTATCTTCTTTTGTTGCTTGGGCTGTGGCTGACTAGTCCTGGTTGACTTGGAGGGGGCTTCCACTGAACAAAAGGAAAGGAAAAAGAAAGCATTAAAGATAAAACCCAggggctggtgagatggctcagtggttaagagcgccgactgctcttccaaaggtcctgagttcaaatcccaacaaccatatgctggctcac s bosTau2.chr29 32097105 534 + 45822729 TAACTTCTTGTTGCCTTTGCTCAAGTAAGTGCTGTGAGTCCTGTTTTCCAGTTGTCTTGTTTCCACACTCACAGCCCCTTTTCCTTCTCCCATCCCAATTCCCACATTTAATCACACACATCTCAGTGGGAACGAGGGGGCTTTATTACAAATGCAGTTGACTGCTTAGGACTCCCTCTCCAATTTTTCTTTTCTACTCTCTTTTTCTCAATACATCCCTCCAGGGCAGGTCAGTAGGCCATTAGGGAAGAGGTATACGGGGAGAATGAAAAGGAGCAATGCTTTCTCCAAAATCATCTGAAATAACCTTTGAGTCCTTTTGGCTCCAGCTTGAGAATCTTCTGGTGGAAAGGGTGTGAGATTCAGATTTAGCTCTTATCTTCAAGGTCCTCCATATCTACATCCTGGGGGGCTTTTGTCTTCTTTTTTGATCTGGGCTGTGGGTCACTAGTCCTGGTTGGCTTGGGAGGGGCTTCCACTGAACAAAGGAAAAG-----AGGAAGCATTAAAGA----ACCCAA------------------------------------------------------TGAATCCAG----------------GCTGTATCAC a score=9576 s mm7.chr19_random 1424622 232 + 2598976 CCCAGGTAAAATCCAGACTTCTTGTTGTGTAGCCTCTGTGCCCAAGACTTACCTTCCATGGCTGCTTTTTCTTTCTGGGCAAGTCGGATCTGCTGCAAGAGTTTCCTGCGCTTCTTCCCAGACAGCGTGATGTTGGCACGAGCACTGGACCTGAGTGACAGGAAACAAAAAATAT-CCAGGTTCATTTGTACCAAACTGAGCCTCAAAAATGACCCCAGCta-agaaaaggtct s bosTau2.chr29 32097639 206 + 45822729 CCCAG---------------------------CTTCTGGGCCCTAGCCTCACCTTCCATGGCTGCTTTCTCTTTCTGGGCAAGTCGGATCTGCTGGAGGAGTTTTCTGCGCTTCTTCCCAGACAGAGTAATGTTGGCACGTGCACTGGACCTAAAGGGTTGGTAGGAGCAAAAATACCAGTTGAATCTGAACCAAAACAGACCAC-ACAGTGGTTCTGGTTACCGGAAAGGTCT a score=27573 s mm7.chr19_random 1425367 1137 + 2598976 GATACCATAAGAGGCTAGTA--GTTTGGAAACTAACATAACTCTCAACTAGTTGCTGCATAAACGTGA-------AAGAGAACAAGAAATTTGGAGACCTCTGGGATGCTCTGAAACCTGGTAGGAAGTGGGTAGGAATGTCCAACCGGAGGATAATAC---------------TGTACGTACGCCCGCTTCTTGAGGTGGTGCTTCGTAGTCAGCCCTTCGTCTATCACAGCCCCGACCACCTGGCGTTTCCGTCGCCGATCCCTGCTTAATACCCTGCGGCGCTTGAACAACTTCTTCTTCAGCTCCTGCGGAAGAAAAAGATGCGCATGTAA-----GGTTCTGCACACCCACCCGGGATCCTCCGCACCTAACAACCCCAGCCCCTAACTAATCCTGTTTCCAAAGAGGAAAATG---CCGGGAAGCAAAGGGAAACAAAGACGCAGTTCCCACTCCCACAGTTCAGTCACCGTCCGGGGACGATTGATCTTTCCTCCCGGAGGTGCCATGGCTACACTCCGCGGCTCATTCCAAAAGCCGCACTTCCGCTCCGCTCACAGGTTCCGCCACACGCAAAAGACCCCGCCCTCTGATGCCTCCGAACCAATCGCAGCTTGGAGGCGGGCACCAGGGGTATATAAGGTTGTTCCGCGCGTTGCGGGGCCTTTCCAAGGGTGGTTTTCACGTGAGTCTTGATTTTGTCTTTATATGCGAG-----------GGAACTACTGGGAACTGGGCCTGAC-TTTGTAGATCCTCCTTTTCTTGGCGGGGACCGGGCGTGCGGTCCCGCTCCCCGTAATGTACGGAGGTAGA-AGAAAGGGCTCTGGCCCTCTCGGCGTTATGTCTTCGGTGCTTGCGGCTTCCCGTTCGCGGGTTCTATCCTCAGACGCCGGAACACTTAACC-----GTGCAGAAATGTAGCTAGGTCCCGCAG--TCCCCTCTGGGTTACTCAACGCTTTTTATTTTATTTTAGGTCGACATTGACGCTCCCGGAGTGATGGTTA--ACATTTTCTTTGCTGTTTATTATTG-AATCAATAAAGTCTGT--GAACCCTAAGGACCCTGTGTTCGCTACCTTTTTT------------------------------------TTCTGCGACTCGTAATTTGCAAATCTT---TAGGACCGAAAGCACATGTTGGGAGTGATAGTGAC-TATTCACTAAAG-ATCTCTGGTCGATCTTG s bosTau2.chr29 32099785 1173 + 45822729 GGTATAATGAGAGGCTAACAAAGTTTAGGCACAAACTTTCCT-------------TGCGTAAGTGTGAGTATACAAGGAAAGCAAAA----TGGTG----TTAAGCTACTCCGGAGCTCGACAAGGAG--GGAAGGAGGGTTGA--TGGGGGAGGACGCAGGGAGAGAGGGTCTGGCACTCACGCCCGCTTCTTGAGGTGGTGCCGCGTAATCAGTCCTTCGTCTATCACAGCTCCGACCACCCGATGCTTCAGTCGCCGCTCCCGGTTCAACACTCGTCTTCGCTTGAACAGCTTCTTCTTCAGCTCCTG-GGGAGAGGAAGATGCTTAATCAGAGGGCGGCTGCGCCCTGCGACCTGGGA--CCCCGCACCCGGCGACACTGGCCCATA---GACTCCATCTCGGGCGAGAATAAAGGCTCTGGGACGC-TTGGGAAACCATGTCGGGGGTCCCA-----------GAGTCACCGTTCGCGGCCGGTTGATCTTTCCACTCGGAGCACCCATAGCTGCGCCGCTAGGCCGGCTCC-GGGTCCACGTTTCCGTT--GTGCGCAGGGTCCG---TGTGC-----GCCCCGCCCTCAGCTCTGTGCTAGCCAATCGCAACTCGAGGGCGGGCCCTGGCACTATATAAATGAACCCGGCTCGCGCATAAGCCTTTTCGAGGGCGG----CGACTGA---TTGAGTGTGGTCTGGTAGGTGGGGGTGTCCGGCTGGTGTTCCTGGGGCGTGGGGACGGTGCCTGTGGACCCTCCTTTTCTTGGCGCGGGTCGGGCGTGCAGTCCCGATCCGCGTAATGTACGGAGGTAGAGAGAACGGGCTCTGGCCCCCTCGGCGTCATGTCTTCGGTACCGGCGGCCAGCTGTCCGCCGGTTCTATCCTCAAGCGCCGGGACACAGAGCTCCAAGGAGCAGGGCAGAACCGAGGTTCAGCAGACTCCTCCCGGGGGTACTCACACCTTCTCCTTTGATTTCAGGTCTGTGGAGCCACCCCAAGAGCCGGAGCTGCCATATCCCCTCTTCCACTTCCCGCTGCAAACAATAAAGGTCATTCGTACGGTACTAAGTTTGTGTCCGCATTCTCTTTTTCCGAAGCTGCAGGGTTAGGGAAGCTTTATGCGTCATTCCGCACAGCGGATTTTGCAAATCTTCCCTTGGATCTCAGGCCCCAGCC-GGAGTACGGGCGACATTTTCACACAAGTTTCTCTGGGCGACCTTG a score=1073 s mm7.chr19_random 1426569 124 + 2598976 CCTAAAGGCATGGGAATCAAACCTGTAGTTATGGTAAAAAGCCTAGCGTA-ATGGTGCGCACGTGTAATCAGCA----GAACTAACCTGGGGTAGCATG----------CACCCTTATCTTCAAGCTTCCTGGCATTTA s bosTau2.chr29 32101082 133 + 45822729 CCCAATAGTCTGGTCATTGAAATTGTG---ACGCTGAAAACCCCAGGGCACATGGCGC---CGATTTTGCAGCAGTTTGAAAGAACCGGGCGCTGGGTGATGCGTGTCCTCCCCTCGTCCTCAGGTTCCCTGGCTGGTA a score=2794 s mm7.chr19_random 1426725 305 + 2598976 TATTGGAAGTAAAAC-TAGGATCTCAATCCT-----------------CCACAGGCATG--CCCTGTGGATGTTCTCGGGGTGGACTTGTCT-CCGT-GCTGGGACCTACATAAACAGCCTTATACAAGGAGGCCATTGCCA---TTCCCAGTG----------------------------------------------CAGAATCTGGGAGCCCTAGCATCCTTAGGTTCCTCACAGCTCTCCAGGGATAA--------------TTGTTGCTAAGCGAGATTTGCCTGAG-----------------------------------------------------GATTCA-----------AGGACCCTCCTTTTCAGCTGCCCTACTAGAAGTAAGAAAAAAAAAATCCAATGGCTGGACTG----GGTATAAAAATTAAGCCCTAaaccgggca s bosTau2.chr29 32101368 450 + 45822729 TGTTGGACGTGGGCTGTGGGACCTCCAGCTTGTGTCCAGGCCTCTATACCAAATGCCCGCACCCCGTGGACGTGTTGGGGGTGGACTTCTCTCCCGTAGCAGTGGCCCACATGAACAGTCTCCTGGAAGGTGGCCAAGGCCAAACACCCCTGTGCCCTGGACACCCTGAGTCAAGCCTCCATTTCATGCAGGCTGATGGCCAGAATCTGCAGCCAGTGGCTTCCTCAGGCTCCTTTCAGCTAGTCCTGGACAAGGGCACCTGGGATGCTGTTGCCCGGGGTGGTCTGCCTGGGGCTTACCAGCTCCTGGCAGAATGTCTGAGGGTCCTAAGCCCCCAGGGGACCCTGATTCAGTTCTCAGATGAGGATCCTGATGTGCGGCTCCCCTGCC--------TAGAGAAAGGGTCCCAGGGCTGGACTGTGACAGTGCAGGAGCTGGGCCCTTTCAGGGGCA a score=12633 s mm7.chr19_random 1427493 254 + 2598976 TTGGAGGAAAAAAAAAAACACCAATACTTACCCCCAAAAGTACTGAGAGGTGGGAAATGGGGATATTCCATAAATCGTGTTCTATAGATGCAGGACCC---TGTTGGGTCCCAAAGAGGACAGAGATTGGGAGTTTCCTGACCCTCTGTATCTTCAGGAATCCAGAAGGCATCTT---------GTTCTTGACCCCAGCCAAGTCCAGGGTTTATTGTTCTTAAAGGAGATGTGGGATCCTGTGGGATCCAGGCCCAACCTGGGAG s bosTau2.chr29 32102301 259 + 45822729 TTTGAGGGAGAAAG-------TGATACTTACCCTCAAAGCTCCTGGGAGGCAGGAAATGGGAATATTCCACAAAGCAGCTTCTGCAGACATGGGAGCTTGATGGTGGGTCCCAGAGAGGACAGGGATTGGGGGCTTCCTGACAGTCTGTGTCCTCTGGGATCCAGGAGGCATCTTGATCTACCCGTTCCTGCCCCCAGCTGAGTTCTGGGTTAAAGGTTCTTAAAGGAGACTTAGGGTCCAGGGAGCTCCAAGTCCAGCCTGGGAG a score=24927 s mm7.chr19_random 1430407 625 + 2598976 GTCTAAAATATCTAAATGTCAATGGCCTGAAC-GAATCAGCCACCACTTTCACCTGGCTCTTCACTTTGATCCTGGAAGAAAGCTTCTGCGTCTTCTTC---ACCATCAGTGAGCACCAGCAACTCCTCATGTGGCCACTGGTGGTCTTCCTGGTCTTCCTCACTCCCCTCTGAGGCCTCTACCACAATAGAGGGCAGGCGGGGCTTTTGAGACA---CCTGCATAAGTACAGCAGGGGTGTTGGGCACAATTCGAAGATGAGCCTGTCACAGGACGTGGTATAGTAA--TACTGACCTCAACATCCTGATGATCTTCACATCTGCCAGTCTCTTCTCTGTTTTTTGAAAGGGGGTTGGCCAACTGAGGACTTTCTGGATGCCATGGAGAGTCTGGGTTATCTCCAGACCAAGATCCATCCTTGCTACTCTCTGGCACAAGGGCCAT-GATAGTAACTCTGTAAACGTGGAGATGGTTGGATTCCAGGTCAAGTCCCTGTGTCCAGTGC-CCACACAGACTGTGCTTTAATCCTCTTTGGAG-AGGGCCTCTTAATCACTGCTGAGGAAAGCATGATGACATGCTGGGAGATTATGGGCCTTCCATGGGAGGGA--GATGCCAAAGAGGAAAGACAGAG s bosTau2.chr29 32103052 626 + 45822729 GCTTAGAACATTCAGTTCGCAACAGCCCCATTTGAATGAGCCTCCTCCCTCACCTGGTTCTTCACTTTGGTCCTGGAAGAACACCTCGACCTCCTCTTCCTCATCGTCAGTCAGCAGCAGCAGCTCCTCGTGTGGCCACCGGAGCTCCCC---ACTCTCTTCACTTACCTCAGAGGCTCCCACCACAATGGAGGGGAGGCGGGTCTGCGGACACATAACCTGGATAGGCACAGCAGGGGAACCGGGCCAAAGTGGAGGGTGAACCAACAGCAGGACGCAAGGTGGGAAAGTACTAACCTGAACATCCTGGTGACCTTCAACCCTGTCAATTTCTCCTTTGTCCTTCCAAAGCGGGTTGGTCAGTCTAGGACTGTCTGCACGCTGGGAAGAGCCTGGGCTATCTCTAGACCAAGGCCCATCCTCACTGCTCCCCGGCACAAGGGCCATGGGTGCTGATTCTA-GAATGCAG-GACAATTGAACTC--AGTAGAGCACCCCTGCCCAGTGCACCCCACAGACTGCTCCTTTAATCGCTTTGGAGCCGAGCCCCTTAATCACTTCTGAGGAGAGGAAGCTGAAA-----GGAGATTATGGACCTTCCAGGGGAGGGGccaatgcc-aggaggtgggatgaag a score=3977 s mm7.chr19_random 1431041 148 + 2598976 GTGTACTCCCT---GAGACACTGGGGATGGCAGGCAAGGTAGGAGACAAGG---GCATCTGGATTAAAGCCCTATAAATAAAGAGCCGGGGTGACGATGGATTTCCCAACTCCTTTTTTTTTttttgatttttcaagacagggtttctctgtgt s bosTau2.chr29 32103857 150 + 45822729 gcGCACTCACTCTGGTGACACAGAGAAAGGCAGGAGGAGTAGGAGTTAAGGAGGGCATTTGGATTAAAGCCCTGTGAGTAAAGAGCTTCAATAAT----GAGTTTGAAATTTCCTGATTCTTACAGGGTCTTCCAAGTTCACATTTCTTGGTAT a score=18143 s mm7.chr19_random 1433790 831 + 2598976 TTTAGCCCTCTCTAGCCCAGCTGTTTCTCTATGATTTGAGGCCCGGCCCCGCCCCTCTCCTAGGTCGCTCTAGCCCGCATAGGGAGCGGTGAGATGTCATGGCTTCCTT-CTAGGCTGCGGGAGGAAGCGGACGGCACCTCTTTTGTAGTGTAATCCGCCATGGAGGTGGCTCGTAAAGCACTTGTGGCAGTTGCAGTGCTAGGCGGGGGAGCTGGCGTGGGTTCTATTCTGTTTGCTCTTGTGACCCCAGGAGAACTACAGAAGCAGTCGATGCTGCAGGTAAAAACAACCGGACTCCCCGAGCTGGG-TGTGCGTGGGACGAGCCCCTGTCTTTTCGCCCAGAATGCAAAC-ATCCTTCTTGCCCGCAGGAGATGCCGGAAAGGGACTCGCGGCGCAGGGACGAAGCAGTCAGGACCACGGAACTGGTGATGGCTACCCTGAAGGACGCCGCAGCCACGAAGGAGAACGTGGCCTGGAGGAGAAACTGGACAGTTAGCGGGGATGGC------------------AGGTCAGCATGACACCAGAGCTCG--CCCGTGGTCACGGGAACCTGTA---------AGGCTCC-------------TTTCTTGGTGCTCCGGACATGGAGTCGGGAGATACACCAGGACTC------------TCTCCAAGTCACTGGGAACTGCGGTTGGGGGAACGC-----------------------------CTTTAAAGAGCACATCGCCTGACAGGGTCGGATGTGTGGAACCAACGGAACTAATAAATGCAGTTCATCCATT----AAGTGGATTTCGCAGCTGGACATCT---AATGCTTAGAGAGCTGTGAGAGAGCGCAATGTGC--GCTGAAGACCTAGGCAACTGCATGCCA--TCCTACCCCTGAGAGTTCTTAAGTCCAATAAG s bosTau2.chr29 32105445 885 + 45822729 TTAGGTCCTCTCTAGCCCGGGCCCGTCTCTATG-----------------GTCTCTTGTGTGGGGCGCTCTAGCCTGCGCAGAT-----TAAGTCGTCGCGGCGGCCCGGATGGGCTACTGGAGGCTCCAGAGGTCCTCTCGCTGGTTGCGCTGTCGACCATGACGACCCTGCGCAAGCTGCTGCTCGTGGGCGCACTGCTGGGCGCCGGGGCTGGCGTGGGCACCGCGCTTTTTGCCCTTGTGACCCCGGGTGAGGAGCGGAAGCAGGCGATGCTGAAGGTGGGAGCAGTTGGGGAGGCAGAGGTGGGGTGGGCGGGCGGAGAACCCCGGGCTGGTGGCCGGGGCTGCGAACCACTCTTTCTGCCTACAGGAGATGCCGGAGCAGTACCCGCAGCGCAGGGACGAGGCGGCCAGGACCAAAGAGTTGCTGCTGGCCACTCTGCAGGAAGCAGCGGCCACGCAAGAGAACGTTGCCTGGAGAAAGAACTGGATGAGTggcggcggcggcggcggcggcggcggcggGAGGTCAGCCTGAGA-CAGAACCTGATCCCCTGGGCGCCGGGACTTATGCTGCAGCGCAGGCGCCCAAGCCGCCCTGACTCCTCCGTGGGCCGG-CGGGGAGTCCCG------ACCCGGATGCCAAGCGCAGGCATCTCCGCGACTTCGGGAGCTGCCGCCGGGTGAGCGCGCTCTCTTCCACAGCTTGCAAGGACTACGTTTTAACGTCCACATCGC----------GGGCTGTGGCTAACTGAAGGAACCAATAAATCATGTTCCTCCATCCAGAGAGTGAGCCCTGCGGTTGGACGCCCATAAAAGCCAAGTGTTCTGCGGGTAGGTGCTGCGGCCTGGCTGGAGTGC--GGCTGCCGGCTGCCACGCCCGCCCTATGTGAG-GCTGAAGCCCAATAGG a score=32280 s mm7.chr19_random 1439068 597 + 2598976 TTGCCCTTCTCAGAAAGGCAGTTCTGGAAGGAGCCAGGCATATACAGAACTCAA-AGGGTCTATTTATTAGGAAGGAAACGTCAGTGCTTTATCAAAGATGAAGAG--GTTAGAAAGAGATGGTGGGATGGAGAACCCTCAGCTGGGACACTTCTTGGCCACAATGAGGACAGCAGAAGGCACGAGTCCTAAAGATGGAAAAGAG----TTTGAATTACAAGGATACTTAGGGCCTTCAAATTTCTGGACTCTATAGTATGAGTCCATTAAACCCCTTCTATCCCAACTGACTACC---CACCCTATCCACCCCAACTGCCCCTCATTCCTTTAAGCGCTAACTCCTGGTCTCACATAACATACCCAGTTCCTGCAGAGGCCGTTCCATATCAGCCTCTGAGAAAGCCCGTCTGGGGAAGCCACTGAGCAACTGCACAGGGTCCTGGTCCTGTCCAGGCTCCTCCCCACGGTGAAGCTCCACGTAGAGCCTCACAGCTGCCAGCTGTTCCCGGGCCCGGAAAGTCTGGGTCAGTGAAGTCCCATCAGGCAGCCTAACCTAAAAGGCAAGAGAAAGATGCAGTACTATGAGCACTGAAACTGAGTGAG s bosTau2.chr29 32107985 590 + 45822729 TTGTCTCTCCCAG-----CCATTCAGGAAGGAGTCAGGCACATACAGAACTCAGGAGAGTCTATTTATTAAGAAGGCAATGTCAGTGCTTTATCAAAGATGAAGAGAGGTCAAAGAGGGATGGTGGGATAAAGCCCTCTTAGCCGGGACATTTCTTGGCCACAATGAGGACAGCAGAAGGCACAAGTCCTGAAGATGGAAGAAAACAGATTTGAACC-CAAAGATATCTGCTTCCCCCCA----CTGCCCCCCATTCTG-----CCCTCACACCATCTCCATACAAAGTCCCTTCTTTGCATCCCTTCTCCTCAAGCATCCGCTA--TCCCCCAAGTCCTGGTTTCAGATCCCACGTGTCATACCCAGCTCCTGCAGAGGCCGCTCCATGTCAGCCTCTGAGAAGGCCCGCCGGGGGAAGCCACTGAGCAACTGCACAGGGTCCTGGGCCCCGCCTAGCTCCTCCCCACGGTGGAGCTCCACGTAGAGCCTCACAGCTGCCAGCTGTTCCCGTGCCCGGAATGTCTGGGTCAGTGAGGTCCCATCTGGCAGCCGGACCTAAAGGGCAAGAGAGAGATACAGTATTGTGAATATCGTAACTGAGTGAG a score=23971 s mm7.chr19_random 1440087 572 + 2598976 GTACCCAAGAAAGGAAAGGAGGTACTAGAGCTGGCT-CTGCTTCC-CTTGGAGCATCTGAACCAGGACAAATACTACTTAAAGGACCCGATGAACAACCACTCATGCTCCACCGCAGCAGGTGATGGTAATGGA-------TTCGATACCTCACAA---------GACAAGATGGAATTACTTTTAAAAGTCA-CTGTGAGGAC----CATATTATGAAAATAGCTGTGTAAT--GAATCTAAA-----------------------ACTGCTTAGTAAGGATGAAGTAAGGATTTAAATAAGAT--GGGCAGGTGAAATTTGAT--CTTTCCAAAGAGTAGAGGAGATAGGATTTCAAAAGTCATGTACAAAGAAGGGAGAGATTTGGCAAAGGGGACTTAAGCGTGAACAGCTCTGGGCTG-------TCTGGCACTTTATAAGCCAACACGGGATTCCAGAAGCAAGACGGTCACTTGAAAACAGTACCTGTATACGACACTGGTCATACTCCCGCTTAGTAGGGGGCTCCTGGCTGGGAGAAGAAGGAACAGGACCTGGGTCTGTTGCTGGTGGGGATGACCGAGAACCCACACTACCACCATACTGAAAGACAAAATGGAACACTA s bosTau2.chr29 32108575 625 + 45822729 GTGCGCAAGTAAGAAAAAGGAGCA---AAGTTGGCTTCTCCTTCCACTTAGAGGGACTGGACCAGGATAATTACTATTGAAAGCACCTAATGAACAACCACTTAGAATGCGCTTTACTCAGCAATGAACAAAGAGACCCCTCTAGCTCCCTCACAATTTAACGAAAACATAATGCAA--AATTATATAAAACATCTGGATAGATATCACACATCATGCAAACAGCTGCATAATCTAAATGAAAACACTATGAACAAGTAAAAAGGCAACTGCTGAATAAGAGAGAGGTATGGGTTTAAATAAGACTGGGACAAGTGAAATTTGATATCTTCCCTCACAGCAGAGGAGGTAGGATTTCAAAAGTCATTTACAAAGAAGGGAGAGGTTTGGCAAAGGAAAAGTAACTGAAAAAAGCTCTGGGCTGGGCTCGGTTGGGTGCCCTGTAAGCCAACAAAGGGTCCCAGGAGCAAGACTGGAATCCGAAT-CAGTACCTGTATGCGACACTGGTCATACTCCCGCTTTGTGGGAGGCTCCCGGCTGGGAGAGGAGGGAACAGGGCCTGGCTCTGTTGCTGGTGGGGATGGCTGAGAACCCACGTTACCACCATACTAGAAGACAAAGTTCAATAATC a score=25609 s mm7.chr19_random 1440881 495 + 2598976 AAATTAACCCACATACTCCACTATACCCAGACTTTCTAATCACCCACCTTCTTGGCTCTCTCTGCTTTGTCCCTTTCAATTTTTTCTCGAACCCTTTGTCTAGAATAGAGACAGGAAGAAAATAGGTCAGACATGGACAAGGCAAATCTTCATTTCTTTCCCA---ATTAGCGACCAATG-----AGACTTCAGACCTGGCAGCTAACTCTTCAGCCTTTTCCCTCCTGCGCTCCTCCGCAGCCCGGCGCATCTCATCTTCCTGCAGTTTCTGTCGTGCAACTGACAGCTCTTGCCCTTGTCTCCTCCGCTGCTTTTCTCGTTCTAAAGCTTCTCGCTCCTCTCTTTCTTCACGTTCCCGCTGCTTTTGTGCCACAAGTTCCAACATTCTGTTTTGCAGAGAAGAAAGAGGTAAAG----TTGGACATGGAGTGGGAAGGTGAGTTTAGACTGAGAAATT-----AACAAAATAAGGGAATACGGGCTCCAAGACAGAG--GAAAGGAAACAAA s bosTau2.chr29 32109261 496 + 45822729 AAACTATCCTGGAT-TTCCAC--------------CCAATTACCTACCTTCTTGGCTCTCTCTGCTTTGTCCCTTTCGATCTTTTCTCGGACTCTTTGTCTGGAATGCAGACAGGACACAAGAAGGTCAGACATTGACAAAGCAAATCTTGATTCCTTTGCCATGTCTTAGC--CCAACACTCCCAGAATCCAGACCTGGCTTCTAACTCTTCAGCCTTTTCCCTCCTCCGCTCTTCAGCAGCCCGGCGCATCTCATCTTCCTGTAGCCTCTGTCGGGCAGCTGTCAACTCCTGCCCTTGTCTCCTGCGCTGCCGTTCCCGTTCCAATGCCTCCCGCTCCTCTCTTTCTTCACGCTCCCGCTGCTTTTGGGCCACCAGCTCCAACATCCTATGTTGCAGAAAGGAAACCATTCAAGAGACATGTATATAAATTGCGAAAGTGAGTTTATAACAAGGGACTCAGAAAACAAAACCCAGAAACACAGTC-CCAAAACAGATACAAAAAAAAACAAA a score=40099 s mm7.chr19_random 1442485 845 + 2598976 ACCTCTTGGTCTGTTCTTGTCTCTCCTCTTCAGTCAAAATGGGTCTGCTTTCTCCAGCAGCAGACCCAGAGCCTGCAAACAAGCAACCAGGATTAGTATTTAGAATAAGATCATTCTGATTTTCTCGGGGCCCTTTCAAGGTCTCTAGAATCACAAGATGTCTCCCAGTCAGGACCTTCAGGGCCAACTTGCTCTGAGGGCGTGGGTTCTCGTCCCAGGACATGGCTGAGGGGAGTCTCCAGAGGCTCATCCACATCGGGGTCGTCTTCATGCTCCATCAGCCTGCGCGGAGAAAGTAGGCAGGGGTTGGTTAGCCTGGAGGCCACCTTGCCCAGCGGCTCCCAAACTCCCGCCACCCGTGCGGGTCGCCCGCTCACCAATCCATCGCAGCCTCGATGCCCTGGTTCCCTGTGAGGGCCAGAGCCTTCTCCCTGGGGGCAGAAACACCGTGAATAGCGCCCACCAGCCATGGTGACAGTCAGG--------------------------------------CCGGCCAGGCCCGCGGCCTCCCACCACCGGCTAGGGGGAGGCTCCCTTACGCGCGTCCCCTGGGAAAGCCCATCTCGATGAGGCTCTCCAGAGCCGTCAGCTCCGCCATGGCGC--CCGCCTCCGCCTCCGCGGGGACCTGCGG--GGACCAGAAGGAAGACCGCAA---GGGTCAGCCCGGGGCGACTCC-----------------GCCCGCGACGCCGCCCTCCCGGCGCTCGCTAACTCACGGG--GCGGGAGACCCAGGGACGAGGGGGGAGTAGACAGTGAGTGGGGAGAGCGGAGGGGAAGCGGAAGTGCCCG-GTCTGTTTGTGTCACGTGGAGGCAGG-GTGGACGGGTGCCGAAGAGAGCCAGAAATGTCCTTCCTGGTG s bosTau2.chr29 32109867 868 + 45822729 ACCTCTTCGTCTGTTCCTGTCTTTCCTCTTCAGTCAAAACAGGTTTGCCTTCTCCCACTGCAGACCCAGGTCCTACAAACAATCAATCAGTATTATTACCCTT-------TCATCCTCCTCCTC---GGGCCCTCCTGA-------ATAATCACACTGTTTTCCTCAGTCAGGACCTTTGGGGCCACCTTGCTCCGAGGGGGTGGGTTCCCGTCCCAGGACATGTCCAAGGGGGGTGGCTAATGGCTCATCCACATCGGGGTCGTCTTCGTGCTCCATCAACCTG-GCAGGGAAAGTCAGGAGGGA--GATTAACGTTCAGGCTGCCCT-CCCAGCAGTTCCCCGTCCCCTGCCACCGGTCTGAG-----CGCTCACCAGTCCATGGCAGCCTCGATGCCCTGGTTCCCTGTGAGGGCCAGAGCCTTCTCCCTGAGGGCAGAAACACCGTGAATAGCGCCCACGAGCCATGGCGACGATCAGGCTGGGGCGTAGAGCCTGAGGCCACACTGGGGTAAAGGCCTGGGCAGGTGCGCGACCCCGCGGCCCTGGGTTAGGG--GGCTCCCTTACGCGCGTCCCTTGGGGAAGCCCATCTCGATGAGACTCTCCAGAGCCGTCAGCTCCGCCATGACGCCGCCACCGCCGCTTCCGCGGGGACCTGGGGAAAGAGGGGAGCGAAGACGGCGAAGGGAGTCAGCGCGAGGCGCCTCCCACCAGCGCCCAACCTTGCCCGCGACCGCCCCAGCCGGGTGCTTGCTCACTCACCGGCTGCGGACCAGCCGCGGACA--------------CCTACGAGAAGAAAGCCTAGGCGAGACGGAAGTGCCCGAATCTGTTTGGGTCACGTGGGGGCGGGCGTGGACGGGTGCCGCCGAGTGCCAGAAATG-CCGGCCTGGCG a score=9192 s mm7.chr19_random 1450565 230 + 2598976 AGGCAGCCTGGCTCCTGATGCTGAAAAGAAAGATAGTGCCCGTGTTCTTGAGCCTACCTTCACTATACTGTTGCATT-------TGGTACCATATATGTGCTTTGTTAGAAGGTGCTCGGGCGGTTC---ACAGTCTGAGAATG----TATGTGAGTGAGGCAGTACCCATATTCTCAAATTCAAGTCATGGCAGTTTCATTTCCCCTGAAAATAAAGGGGTTTGGTGTTTCGATGTTGAATTT s bosTau2.chr19 23806693 236 - 56387648 AGGCAGCCTGGCCTTTGCTACTGATGAGAAAGATGGAGCCTGAGC-CTCAAGCCCACCTTTGGTGTACCTTTGCCACACGGTACTGGTACTGTATGCGTGCCG-GCTAAAAGGAGGGTGCGGGATTCTTTACAGTCTGAGAATGAGTGTGTGTGAATGAGGCGGTATCCACATTCTCAACTTCAAGTCATTGCAGTTTCCTTTTCCCAGAAAAAAAAAAGG------GGTTAGATGTTGCATTT a score=3422 s mm7.chr19_random 1451461 93 + 2598976 aaggaaggaaggaaggaaggaaggaaggaaagGTGCTCTTTAGGTTTTGTTGGTTTCATTTTTACTTGTTC--------TAAGGAAGAGGAAGACACTGAC s bosTau2.chr19 23806967 101 - 56387648 AAGAGATGTAAGAGAAGAAAAAAAAAGGAAAGACGCTCTTTAGGTTTTGTTTTTTGGGTTTTTTCTTTTTCTTTTTTTTTAATTTTAGGGAAAACACTGAC a score=2719 s mm7.chr19_random 1460941 94 + 2598976 AATTAAACAAGATCATGA-AACTGAAAATGTAATGATTTTAGATTCCCTTTAATGTT--------AATACAGTGGAAAAACAATTACACAAAGTTGTGGGGAG s bosTau2.chr29 32117332 102 + 45822729 AAACAAAAAGGATCATGACAAATGAAAAGGTCTTCCTTTTACATTTCCTTTAATGTTATACAACAAACACAGATAATACACAG-TAAACACAAATGGGGGGAG a score=67782 s mm7.chr19_random 1462102 2295 + 2598976 TTTTAACTGGCTA------TATATAAGTTCATGTATAATGTCTGTAATTTTACCCCTTCAAACCCATAAAGCTTAAATCATTTTCATCAGACCTCCAAGGAATAATTG------------CTACTTTTTCTAACCCCCAACAGGGAAGGAACATAGTGACCAGTTAGGGACTAACCAAGCCCTCAGTGCTGAGGCTAATTGCCTGGGCTTCCGCTCTGGCTTGGCTGTGCCTCTGGTTGCCAGGTGGCAACAAGCCCCACACTCCTCCTGGGAGTGGGTTGGGCTCTCCAGATGAGTTGTTTGTAGTCGAGGGGACTCCTGTCAGAGAGCTTCTGACGCTTGGGCCATACCTTGACGTCGGGGGCAACCCCATCGCTCACGAAGGCAGAAATGCCAAACCAGGGCTGCACAGCTCAGCAGAGCTAAGGCTGTGCCCACTCCCACGGCTGCATAGACCAGGGTAACAGGCTTAGGCGGCATGATAAACTTGCGACAGGGCCCAAAGGAAGGGCCAGTCCAGTTCTCAGGACCCTCGACTTCTGCCCCAGGAACATTGCTCTCACCTGCGTCATTAGCAGCCACCACGCAAAGGACATAAGCAACCCCAGGCTTTAGTCCCTTCAGCTCTGCTCTTCGAACTGTAGCATTGAGAGGGGCACTCTTCTGTGGAGCCCCGTTGCTTTCCCAAAGCAGAAGCCAGTAGTGGCTGACTGGAGAGAAGGGAGCACACCAGTGAACCACTGCGTAGCCTTCTTCAGCCATTATTTGCACTTCTCCCAGGCGAGGAGGCTCTGGCTGTTGATCTTCCCTGGAGAGCCCTGGGCACAGGCAGGCTACTGGCCCAACCTTCTGCAGCTCCTGGCAGGACACCTGCAGGTGGCGGCAACGGTCATAGTCGCAACGGACAGCTAAGGAAGGTGTAGCTACTGTCACATCATCCTCTTCCCCTTCCTGGTAGTCTTCCAGGGTCAAGATCTGAGGTTGGGAAACCAAGGAGGTGGTCATGGCTGCCAGCCACAGAAGGGAAAGAGAGCCCAACATGGAGTCTGGAAGAGAAAGAGTGAATGGGTAAATGCT-GTCAGCCCT------------GTCTTCCAGGGCTATGTGAAGTATGTGAAAAGTACACTATGTGAAAAGTACAACATAGAATC--AAGACCGA--AAGAGGTGGG-----CTGAGACATACAGTCATTGTCAACTGGCTTTTCAGAAGCCAGTGTTCTGGATTTTTGGCTGGTCTAAGGCTGCCCTTCAACTCTGTCTACACCTCCAAATCATTAGAATTATTAACATCACAAATGACTGCTTTGTTTGGGATAAAAATAATGAAATACGGCCCCACAGGAGAGAGAGATGTTTGGGAAGCACCGTGCAAAGTGCTAGAAGCAGGCATCTAATGGATAAACAAAAGTGCTGGGG-----------AAAGAGGTAGAGGAAAGGATTTATTCAGTTTGGGGAAGAAAGGTGGACTGAGT--CCACAGCCATCCTGAGAAATAACCAATCTAGAGCAATGCTTAGTAAGATTTACAAAAATCCAGAGAGAAGGCAGGAGATGAA----GGAAGAAAGGGCGGCGGTGGGCACTGGAGTCCTCCCTCCCTACCTGCATTTGTACAAATCCCGCTCAGGCAATTCAGACTTCTCTCTGTGCACCCTCTTCCCGGGACCCACA-GTAGCCCCTCACCAGTGGGTAGGCCTCGTCACAGTGAG-----GGTTTG---CCCCCAGATATCCGTGGCTAT-CAGGCGGAGAGGCCACTGTCAGGTTGTATC------TTCAATTCTATTTTGGTTGAGAACTTTTATACTCCTCAACTCTGATGTCATCACCTAGCCCC-----------------------TGTGTGCCAAGAAGAGGGCTGGTTCCCTCAGAGGGACTGAGTCACGGGGCCAGGGAGAGGGGAAGCCACATGCAGCGGTTTCAGCTGGAGGCCAGGATGCCTGGGTTCTGACAGAGGAATGAAATGTGGAAAGCAGCCAGGAACTGAGAATCCAAAGGCTGCAGTCATGTGAAAGGATGGGGAGAGGAGTATTATCGGAGGAGGGAGGGAGGGAGGGCACCTGGCTGGTATCAGACAGGAAAACATCTGTGGATGGCTTGGGGCCTAAATTACAAAAAGCTGTTTTGGT--AAAAATCCTTCCGCGTTCATGGCAGTCATTTCCTGTCTTCTGCCTCCCAATGGACAGA-AAAGGGAGGGGTGTAAAGTCCAGAGTGAT--------GCTCTCCGGGCACGCCCTCCTCTGACCCCCTCCCCTGAGGGAGATGA--GAATCACATGCTAGAGCAGGATGCCTCTTACTGGCCAGGACAGGGTTTCTTCCCCAGGTTATGGACGGAAAGAGCT s bosTau2.chr29 32117742 2151 + 45822729 ttttaaattgttacatggttatgtaagtacccacacaatatctgtgattttatcccctggaacc-acaaagcctaaattactatc--tggtccactaaaaaaagatcttgtcAGCTTTCTCTACTCCTTCTAAACCTCAGCTT---CGGAGCAGAGTGGAAAGTTTGGGGC---ATAAACCCACTCAGCAAGGGCCCAGTGCCCGGCCTTCTGTGCCAGCCTCAGTCTGGCCTTCGTGGGCTGTCGTC--------------TCCCCCTGGG-GAAGCCCGGGCAGCCTCAA--AGCCCTGCGTGGCTGGGGCGGCCTCGG-------------------------------------CGGGGGCAGCCCCAGCGCTGGCGTAGGCAGAAGTGCCAGACCAGGGCGGAGCAGCTGAGCAGGGCCAGCGCCGAGCCCACGCCCATGGCCGCGTGCAGCAGAGTGAGAGGCCGCGGCGGCACGGTCAGCCGGCCGCAGGGCCCTAAGTTGGGGCCATCGGCGCTGTCGAGGCCCTCCGCCCCGGGCCCGGGAGCACGGCTCTCTCCCGCGTCGTTGGCGGCCACCACGCAGACGACGTATGCGCCCCCAGGGTTCAGGCCCTTCAGCTCCGCTCGGCGGACCGTCGAGTTGAAGCTGGGCCCCTTCTGCGGAGCCCCGCCGCCTTCCCAAAGCAGCAGCCAGTACTGGTTGACCGGGGAGGAGGGGGCACACCAGTGCACCTCGGCGCGGCCCATATCGGCCTCCACGCGCACCTCCCCCAGGCGTGGCGGGTGCGGCGGCTGCAGGGCGCTGGAGAGGCCGGGGCACAGGCAGGCTGCCGGGCCGGCTCTCTGCAGCTCCTGGCAGGGCACCTGCAGGTGGCGGCAGTGGTCGTAGTCACAGGGGACGGCCGGTAACGG---------TGTCTCATCTAGCTCGTCTCCTTCC---AAGTCTCCGGCCACCAAGGGCTGCGTTCCGGGAACCAGGGAGGTG---ACAGCAAGGAGCCACAGAAGGCAGGGAGAGTGCGGCATGGAATCTGGAAGGGAA--GGTGAAAGGATAAAGGCTCTTCAGCCCCCAGACCCTGCAGGCCCCCCGTCCCTCAACAAAACCTGT---AAGCAAA------GGGAAACAGGACAGGGAACCGGGAGAACAAGCAAGAGGTGGGAACGACCCCGACCCACCCATGTGTCCGTCCAGCTTCTGAACAGCTTATGTGCTTGGTTTTGGG-------------------------------------------------------------------------------------GAAAAGAATGAAATGTGGTCTGAGCCAACAGAGAGAGGTGCGATCAGCAACATGTGAAGCGCTGGAAATAG----TTAATGAATAAAC---AGTGCTGGGGGGAGCTGGGGAGGAGAAGAGGAGGAAATGATTTACACCGCCTGGGTAAGGAAGGTGGAATGGTTACCAGCTGCCACTCAGAGCAA----CCAGCTAG--------TCAGCGACACATGCACAAAGCCAGAAAGGAGATGGAAGTTAGAACGGAGAAGAGAGAAACACAG-AGGCCCTGGAGCCCTCCCTCCCCACCTGTCGAAGGCCTGGTCCTTCCC-TGCCCTCCACACTTCTATCT---------------------CACAGGCACCCCCTTACCAGCAGGTAGGCCTTGATGCGGTGAGTAGCAGGCTGGGGCTCCTAAGAGGTCCCCCGGAACACAGGCTGTGCGGTCACGTTCTGTCAGTGTCTTCAATTTCAATTCTGTTTTGGCCCAAAGCTTTTATACCCCTTGACTGTGATGTCACCACCTGGCCCCCCTTCCCCTGCTCCCCTCCCTGGTGAGTGCCAAGAAGAGGGCTGGTCCCTTCAGAAGGCCTGAGTCACGGGGCCAAGG-GTGGGGGAGCCACATGCAACGGTTTCAGCTGGAGGTCGGGATGCCTGGGTTCTGAAAGAGCAGTGGAATGTGGAAAGCAGCCAGGGGCTGAGAATCCAAAGGCTGAAGTCATGTGAAGGGGTGAGGAGAGGAGC-------------GAAAGGGACGGGGCCACCTGGCTGGTATCAGAGAGGAAAACAGCTACGGACAGCATGAGGCCTGGGCCACAAAATGCTGTTTCAGTAAAAAAATCATACCACATCCATGGCAGTCATTTCCTGTCTTCTGCCTCCCCACGGATTGAGAAAGGGAGGGGTGCGGAGGCCAGAATGATGTATCCCAGCTTTGCAGCCCCACCCTATGCTATCCCCCTCCCCAGAGGGAGAGGACCGAGT---------GGGCAGGTTTTCACTCCCTGGAC--------------TTCCAGGCTGATGAATGAAAACAGCT a score=10959 s mm7.chr19_random 1466110 269 + 2598976 aagcAGCTGCCAC-AAAATAGTTTATTA---AGGGAGC------AAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCT--TTG-TTCAGGAACTGGAGCAGGTCGGGCGTTGCCTGA---------------------GGCTACCCAGAGTCTCAGGGGCAAGGGCAGATGCTGAGGCAGAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCTGAAGCAGAGCCAGAAAAGGGCCAAACAAAATGTGAGTGAGACAGGCTAGG--AGGGGT s bosTau2.chr29 32120029 298 + 45822729 AGGCAGCTGGCACGAAAATAGTTTATTATTGGGGGAGCCCCAGAGAGAGAAAGGGAGCA-GGTGGGAAAGGGCCAGAATATGGGGACTCGGCCCTACTCGCTTCAGGAACTGGAGCAGATGGGGCGCTGTCGGACAGAGCCCGCAGAGGGCTCCGAGCTGCCCACGGTCTCTGGGGCAGGGGCAGA------GCCAGAGGCAGCCAGGTTGGCCTCCGTCAGCAGAGCTGCATCTTCCCAGGAGCCTGAACCTGGGCCAGGGGAGAGAAAACCAAATTCTAAAGGGGAAATTCCAGACCAGGGGT a score=28978 s mm7.chr19_random 1466521 1227 + 2598976 ccctccccatcacacagtaccctccccatcacacagtgccctccccatcacacagtgccctccccatcacacagtgccctccccatcacacagtg-ccctcaccatcactaGCCTCTGGCTCTTGCTCCTCCTCTCCATTCAGGGGCCGCTTCTCTGGTTTCTCTTCCTCAGACAGCTGGCCCTCTTCAGCCAAAGGGAAA----CAGAGGTGAGACAGAAGGTGAGAGCCAGGCACTGCAGGTGAGTGCTGGGGATGAGGAGCGAGGAAGAGG-------AACTGAAC-ATACCTGTTCCTGAGGGATCTTCAGGGCTCTCACCATCCTCCGTCACATCCGACTGCTGGGTAGATTCCT---GACCTTCAGGTTCCA------CAAA-----CAGAGGACAG-------CTAGGGTCAGTGGTTATCCTTGGCTTGCAGTGCCAACTCTACCTC---------TTCCTCGAATCCTTAGTTCCA-----GAGTACTGCATACTTCATAGTGGAGG---CAGGCCAACCCTCTAACCCAGCCAGCCTACCCTTCAAGGATACTGTCAACCAACCAGGTTACCTGGCTGATGGCGCGAGATCCGACGCGGGGCCCCGTGGTGTGAGTTATCCCTTTGTCGGATATTAACCTGTGGAGCAGTAACCACTGAGCAGTGAGGCCTGACTCCCCTCCGCAG----------CAATCATACCCTAGC-CCTAACATGCCCCTGACCACC------------------AAGGGAAGAAAAACGGGGCCTTTGCCCCTTGAGACCTGCAGAGAGAAGCGGTGGCGGGGCCAGACAGCACCCCACACCCACTGCATATAGCTGAAGAGCACGATGACGCTGAGGAACGTGAAGTTGCTGGCCACACCCACGAAGGCGCAGGTCATGGGGAAGTTGTACAGCAGGTACCTGAGGTGAGAAACAGGGTCAGGAAGGGAACAGCGGTTACTGGATAGCACTCGACACTATCACT-CCAAGAAG--ATTTGTAGGACAGCCTGAGTGAGGATGGCTGGAGCTGCCTTCTGCCACTGTGGCACCCACTCCCCTGCCCAGGTTCCAGACCACCCTGCACCAGGTTCTAATAAAGGCCAAGGATTCCAGGCCATCTCAGAATCACAAGGCCACAGCATTTCAATGGCTTCGACTGTAACTCCTC-TAGTCACTCC----AATACTTTCTGAGCCAGTCCAACAAGGCAGTGGATTGCACGGAGATTTTATTGGGCCAGAGTGGTTGTGTGTGTATACGGATCTCACTTTGTTGTCTGAGAACCAGGGGCTA s bosTau2.chr29 32120327 1111 + 45822729 CCCTGCCCCGCCCAAGGTAGCCTCC------------GCCCTGCCCAC------ATGCCCCCT---------GGGGTCCTGCC----GCACAGGGTCCCTCACCATCACTGGCCTCGGGCTCCAGCTCCTCCTCGCCACTCAGGGGCTGTTGTTCTGTTTTCTCCTCCTCGGACAGCTGGCCTTCTGCAGCCCCAGGGGGGACGGCAGAGGTTAGTCTGGAAGAGG----------CTGAAGGGGAGGACTGAGGA---GGAGTCAGGAAGGGGGTCGGGCAGCTGCACTGTACCTGTCCCAGAGGGATCCGCGTGGCTCTCACCGTCCTCTGTAACAGGTGACAGCTGGGGGGACTCCTCCTGGCCTTGGGGCCCTGTGCCTCCAAAGGGGGTAGAGGATAGGGCAGGACTAGGGT----GGCTGTGCCTGGATGGCAGTGCCAACTTCACCCCAATCCACCTTTCTCTTGACCTTTAGCTTAGTAGGTGAGCACCTAAAGCCTCATTCTGGATGGCACAGGAGCCCCCCCTCACCCAGCC--CCCA------------GCTATCACCT-------CTACCTGGCTGATGGGCAGAGACCTTTCGCTGGATGTCCTTGCGGGAACGTTTTCGGTTTCGGATGTTTACCTGTGGAGGGGAAACTCCTGAGCAGCAAGGACTGCCTTCCCTCACCAGAGTGATTGGGCCCTTCCACCCCAGCGCCCAACACGCCCCGGCCCACTCCCCAAAGAAGAACCATGAAGGGGAGAGGAAGGGGTCCTTTG-------AGACCTGCAAAGAGAGGCGCTGTCGGGGCCAGATGCCCCCCCACACCCACTGCATGTAGCTGAAGAGCACAATGACGCTGAGGAAGGTGAAGTTGCTGGCGACACCAACGAAGGCGCAGGTCATCGGGAAGTTGTACAGCAGGTACCTGAAGCAGGGAGTAGG--CAGGAGGGGAGTAGCAGCTACCAGGGAGTAC-CAGCCTTCTCATTTCCCAGAAGTAATTTCTAGGGCAATTCACCAGAGCTTGGCAAGAGCTGGTCTCCACC-CTCTGCCTCCCACCCACT---------------------------------------GAGCCAGTGGTTCAAG----------------------AGAGCATttc-------tccactctgactgcacatgatctccccctggggtgctttcagaa--agtctgat------------------------------ggctgggg------------------------acttccctatctaaggtccaatggcta a score=31260 s mm7.chr19_random 1467991 1657 + 2598976 ctAACCTTGTGGGTGCTCTTAAACCCTGAGCCATCTCTCCAAGCCCCCTTCACATGGCATTTTTA-AGAAGCTCTCTTGAAAGGTGACAAGCACAGTGAAGCCAGGGAGAACCACCTCTGGCCTTTGTAAAATATGATGTGATTGTTACTGGTCACCTCTGCCTGGAACTCTCTTCATTTTAGGGCAGGGTATAGGAAAGCTGTCGATGTTTCCTTCCGTGG---CTTTTTTACCTGAGCCCAGTGAAGTGGGCATGGATCCGGAGGTAGGCTCCATACATCTGGATGCGCTTGCTGTGGATCTCAATAATTGCTCCAGTTGTTGGCACATACTGCGAG--GGTGCAAGGTGAGAGCAGAGT-----------------------------------CAGTATGAGGTCTACTTCCAGTCT-----GTGGCTCTTGCAGTTGACTGTCCATGGGCTTCTCAGGTACAATCTTGGGCTCGTTGA-AGAGTTGTCTCCTAACT-----CTGTCAGCCACTTACCGAATTCTCCCTATAGTCAGAGTAGAGTTCTACTTCCAGGAGCTGCTTCTGTTCAGCGAAGCCAAACAGCAGGAGGCTGGAGAACAGCAGCGTGTCGAGCACCTGGAGCAGCTGCGAGCGGTAATGCAGCATCACCTGACGG---CCGAGAGGACAGATTGGGGACAGGCGCT-------------------------------------GGGTCCATCTGCCCATGCTAAGCAACACGCTCGCTCGCTCATTCCAGGCTCCCTGCTCCTT----CACTTTCTCTCTCTAACTTCCAGTCACCACCTA--------CCCAACCTTTCCACCTGTTCTA--GTAACACT-CCCTAC--TTCCTGACCCCATTTCCTAATTCCAACACAGAGAAAGCCCCTCT-CAAAAATTACCTCCCTGAGGTAAGCAGTCTGCTTGCACGTGGTCTGCCTTCTGGGCTGGGATCTGTGTCCCAGCATCCCACCTAAAGCTTTCCTCAAATGTGGTGACTCTGT------TGACAGTTTACCAA----TGGGGCTCAGTGTTGAATGAGTGTTCAACACATGCTAGT--AAGAACCCAGCATTTCTTCCTAGTCTTGTTAGGAAGAAGTTACTCTAAAACTCTAGCAATTAAGTCAGTTATCTCAAAGCTGGTATGTTTCTGGTGTCTGCTTGTTTTAAGAACAGCTGTATTgggctggggagatggctcagtggttaagagcactgactgctcttccagaggtcctgagttcaaccacatggtggctcacaaccatctgtaatgggatctgatgcactcttcttgtgtgtctgaagacagcgacagtgtacttacatacatacaataaatgaataatttaaaaaaGGATACCTGTATTATTTACCCTGAATTTGGGCACACCATAGGATACCAGTGTTTGGCAAATGTTAAGCTTATTAAACAGCTTCTTCACTTATCTGGTTTAGGCCTGATCTCAGAGCCAAGGAGGTCTTCTTTTGAAACACTAGCCCGATATTCTGATTCTCCCATCATTGTTCAAACATTCCAGTATTGTCCATAAACACTTACTGAGCGTGAAGAAGTGGAGATGATTCGGCCACCTCTGGTATAACATGAAACAGTGACTAAGAACATGCCCAAGTCTTGATTCACAGGGGATTCGGGCAGTTCAAGCTCTAAGGTGACTCGATATGGCTGTCCATACATCAGTACCTGCCCAAGGTAACACACATCTTGTTAAAAAAAA s bosTau2.chr29 32121582 1478 + 45822729 ctagtcttgagggtg------------gggcc-------caggcatc--------ggtatttttctaaaagttccccaggctcctgatatgtgatgtgcagccagggctgagaaccTGTAGCCCAGGTAAAATCCA----------------TCACCTCTGCTTAGGACCCTCTT------AAGGACAGCCCCAGGAGAGCTGCCCAG-----CCCACGTGGGCACTGCCTCACCTGAGCCCAGTGAAGTGGGCGTGGATGCGGAGGTAGGCTCCGTACATCTGGATGCGCTTGCTGTGGATCTCGATAATGGCTCCGGTGGTCGGCACGTACTGCGGGCAGGGGGGCGGTGGCGGCGGCACATCAGGCCAGGACCCTGCTGTCACTCGTACCAGCCCAGTCTGAGGCCTGCTTCCAGCCTCCACCGTGGTCCCTCCTGCCCAA-GCCCGGAAGCTCCTCAGGTAAAATCCTGGGCTTGTGGGGAGGGCTGTCTCCTGTCCTCCTCCTCTCCTCTCCTTACCGAGTTCTCTCTGTATTCTGGGTATAGCTCCACCTCCAAGAGCTGCTTCTGCTCCGCAAAGCCAAACAGCAGGAGGCTCGAGAAGACCAGCGTGTCGAGCATCTGGAGCAGGCTTGAGCGGTAATGTAGCATCACCTGACAGGGCCAGGGAAGAGAGGCTGGGGACGGGCGCTCACCCTCAAAACCACTCCTGAACAGGGAGTAGAGGCTGGGCGTGGGTGCCTACCCTCAAAACCACCCCTGAGCAGGGTATGAAGGCGGCTTCTTCCTTAGGTCCCCTAGTCCCTTTCACTTCCGACCACGCCCCAAGTCTTGACCCCCTCATTGCAAAAGTTTGAAGGCATCCCTGCCCTGCCCTTCCCAACC--ATGTCTCTATTCCAATACAACAAAGTCTCCTCTTCTAAGAAAGCCTCCC--AGGTGA--AGCCC-----CACACCATCTGTCATCT---------------------------------ACCTTTCCCCAGA----ATGGTTCTATAACCTAGACCAGTGTACCATCTATTCTGGTACACTG--GAACCAGT-----ACACGTGCCAGTGTACCATCTGAGGCTTTCTTC-------TGCCACG--------------------TGGACATTCAGGAATTTGCTTCA----CGAGACGGTTCTGTTGACAA------TTAAGAAC----------------GGAGTCTGGTCTGT-----------CTGGCT------CCAAAAAGCCCGTTTTCAG------GGCGGCTC-----CACTCAAAGATGGATGTG-------CTCATCGGATGTCTGGCGGCAG-GAGGAGGTGCTTATCTG---------------------GTAAACTGACACCT-----------------------CTTGCTATGGTGTGTCTGTGT--------------------------------------------------------CTCAGACCTCAGAATGTTTTCTCCTGAAGCCCCACCCAGATACTCGGA--CATCTGTTATTCTCCACAACCTCCTGGACAGGCCACTGACACTCACGGAGCGTGAAGAGGTGGAGATGATTCGGCCGCCTCTGGTGTAGCATGAGATGGTGACCAAGAACATGCCCAAATCTTGATTCACAGGAGACTCTGGCAGCTCAAGTTCTAAGGTAACGCGGTACGGCTGTCCATACATCAGTACCTGCCCAAGGTGGACGGCATCTCTTTCAAAAAAA a score=8317 s mm7.chr19_random 1470132 194 + 2598976 TCTTGGACTACTATGTTTACGAGAAGTGCCCTGTTGCATTTCTTTTCCAAAAGTGAACAGTCACATTGCCAACTGGGGCATCTGTGATTCAGGCCTGTGTGCCGCC--GGAGCTGTCCCCCTGGGCCTAGTCTGCCCTCAC-----TTGCTAATTAAGCAAGTGCTG--------CTCTGCCTCCCTAGTCAGCTCTTGCACAATCACT s bosTau2.chr29 32123222 207 + 45822729 TCCTGAATCACTCTGTTGGAGAAAAGT--TGTGTCACATTTCTTTTCCAGAAGTGAACCGTCATGTTGCTAAGTGGGCCATCTGTGACTCAGGCCTCTTTGTCCCCATGAGGCCACCCCCTCGGGCCCAGCCTGCCTTCACTTACATTACTAATTAGCAGAGTGCCAGAAGCACTCACCATTTCCCTAGCCAGCTCTCCCACAGTAACT a score=17497 s mm7.chr19_random 1471574 1224 + 2598976 TCCAGATTTTCTTTTCCACCCGTTTGCGTCAGAGCCTTTCTCTTCAATCTCGGTTGCTCAATCCCTGCTCTCCCCATCTTCC---------------TCAAGCAATCAAAGC-----------CTCTGTCTAGTTCTCATACTCACCCGATCACGTCCACTCTTAGCCAGTGAGACATTGGCAACAGGGAAAGAGCAGAGAGAGGCGGTGGAGGAATCACAGTCTGTCCTAAATGAGAAGGGATGAACAATGCTTTGTGAGGTGCCAGCCTGCCCAGCCTACCTGCTCACACA---CCTAGTCTCTAGGG----CCCCTCCCCTCACTCATCCCTT------------------TTCCCCATTACAG-GAAATGGAGAACAGAAGTGGACACTAGAGTCAGGAGATCCTAATAAGACTTTCA--TTCTCTTCCT----------------------CATGAGAACAGA-ACCCATAGGGAGGAGCCGAAGGACACTCAGG---------------------GTTTCTATAGGCTCCCTTGAAGATCT-----CAGGGCATGT-----------------GgattttagggtccctctcctaaagagtctgattcagcagttctggactaggTTGGAA---AAAGAAATTCATCCTAAAGGACCTATGGATATGTCTTTTAAAGATAAATTATACGCAAAACTGCACATAGTATATGGTACACAGCTCCTACCTCAGTATACATACATATACCCCATGTATGTAAGACTCGTGCTCCCTTggggctggagagatggcccattggtcaagagcactggttactcttgcagaggacctgagttcaattcccagcaaccacgtggcagctcacgaccgcctgtaactccagttgcaggggatctgacaccttcacacaac--cacacgggcagg---caaaacaccaatgcacatgaaacaaaa----ataaTTATTAAAAAAGGATTCATGTTCCCTAAGTGTTTACATGGGTCTACCTTAGAAATGACAACACAAGATTAGGGATTTGGGACAGGGGAAAAAAAGG---------TTTTAAACCAATGATCATAAAAGCGTTTTCTGTATATGTTAATTTGTCTCATAGCCATTGCTGGGAGACATACAGAGACTTTGGCAGTGTGAGTAAAATGGATATGAACTCGAAGGCTAGGTTAGCAGTAGGACTGCCTTGGGTTACTGAA-----------------------------TGT--------ACCATTGGGGGTGAGTGGCAGTACACTAAAAGGCAAAGGAGGTATTTCCTAATAGCTCACGTGTTAATAAAGCCAGTGTAATTCTTAGATGCCATG-GCAGTTGAATTGGCTCAAAGGTTTCATGCAACCTCAACAGAA s bosTau2.chr29 32125837 1181 + 45822729 TTCAGTTTTTCTTTAACCTCCCTTTCCTTGAAAGCTTTCCT-TTCAGTCTCTCTTACTCAGTCCCTGGTACCTAGGTCTTTCCCAAGTGTTCTTGTTTCAAGTCATCAAAGCACTAATGAAACCTCTGTTCAGCTCCCATACTCACCCGATCACGTCCACCCTTAGCCAGTGTGACATTGGCAACAGGGAAGGAGCAGAGTAAGGAGGTGGAGGATTCGCAGTCCGTCCTAAATGAGAATGA--GGATGATATTCTGCTAAGTTATAGTCTGTCT----TACTTATCCACACAGCTCCTGGGCCCTTGGGACTCCCTTTCCCGTCCCCCATCCTTTCTTCCAGAACAGGCATCCTTCTCTGTTACAGAGAGATGGAGAAGAAGTGCAGCCAGGAGATTCAAGACACTAGAATGAGTCTTTTAAATTCTCTTCCTGCTACTTGTGTTTATTTCTTCTCATTAAGGTAGACATTCTTAAATGGGAACCTATGGACACTTAGTTGAATAGTTTCAGACTTAAGTGTTTCTAAAGACTTACTTGGGAAGCTGATAAAAATGCAGATTCCTAaaaaaataaaacagattcctgggtaccacctctctagattctgattccagagttctgatctgggccctagTTCAAGAAAATTCCTCCAAAGGGACCCACAGATG-ATCTTT---------------------------------------------ACTCTTA---------------------------------------------------------------AACCCTTTACTCACAAACCCT--------------------------------------------------------------------TCCAATTGTAGG----------------CAAAATTGCACATGGGCATGTATCAGTAAGTAGGTTCTTATGACAGGAAGGGCCATAGCTTTCATAA---GATCCATGCCTCCTAAAAATTTAAGCAGCTGTGCCTTAGAAATTATGGCTCATGACCAGGGATTCAGGACATGGAAAGAAAAAAAAACAACAACTTTGGACCATTGTTAATAGCAAC------------TCTTGATTGGTCCTGTAGTCATTTTTAAAAGAAGGGGAGAAAATTTGGCAGGATCTGTAAAATGGGAAGGAACT-GAGGACTCAGATA--AGTAGGACT-CTCGGAGTTTATGAACCCAGACACCTTGTTGTTTTCATAAGCTCTGTTGCAGCAGACAAATAGGAGTGGGAAGAAGTAATGTGAAAGGCAAATACCGC-TTTCCTCATATCTTCTTTACTGA--AGGCCAGATTAGTTCTGAGATGACTTGAGAGGTTGGGTTAGCTCAAAAGTCTACAGTAGCCCTGAGAGAG a score=45539 s mm7.chr19_random 1473002 1847 + 2598976 GTCTTTTTtttttttttagacccctttgagacaagttctcaacctgtcttccaggctggcctggaactcatgctaattctcccaactcagcctccccagactggtattacacacgtgaccaggctcTTTTTCTCAGTTCTTAACCACAATTTCCAGCAGAGGCAGACCTAGAACCCTAAAGCCCTACCAGCCCAGACCTGCTCAAGCCTTGGCTCAGGAGGGCAGAAGTCCTGATA-GCACACTAGAATAAGATTTCACCCTCGGTCAATACTGGGATT-----CAACAGAGGAGAGACTCCACAAGTCCCTGAAGTAATTTTCAAGTTAAGATCCATCTACTTGAATGGAGCAGCCTTCTCACCTGTAGTGGAAGTGCACAGGGCTGAGGTGGCTGACCGTCGGCATGTAGGAGTAGTAGAAGGAGCCATAGAGGAACACAGACACCCAAAGCAAAAGAAGGATGGTGCAGAAGAGCACCCCAAACTGCAGCATCAGCCTGCGGGCACGGCCTGCCAAGACGTGGCCCACTTCCTGGGCCCACAGTAAGGCGGGGACTGGTGGGTCATTGACCATGATGGGGACAGCAGGGGGTCTGGCCCCAGCCTCAGGCTTTGAGTTCCTGGCTGGTCTTCCACAGGGACGATACCCTTGGCCATGGGATAGGGCAGCTGAAGGTTCCTGGAGAAA----GAGAAGGGAAAAGACAGTTTCTTTTC-CAGGGTAGCTGGAGACAAAAAAG-----CTTATTCAACTGGCTTTGA-AAACTAGAGGTAGCAGGGCAAAGCAAAGTCATTGCTTCACA-------------------TGCGCTTCTCTTCCAATTACTCCTTCACCTCCCTCCACTGAGTGTGCTTCCAGCCTCT----------------------------TCCTCCAGTTTCGGGAGCCTGGGACAAACCTCCTTGATA--CATTCACAGAAGTATA--ACGTACAGAGAACGAGGCCTTTAAATCTCTCTCGAAACCCAGATG---ACATGGATCCAAAATGCCAgaggtttgcaaggag-gtgagtgacttgcctaaggttgcacagccggccagtctggctcaaagccagcagccttagagcagtcaaaattgcctcccaagagtttctttcctctgcCTGGACCTGTGCTCGCTCACGGAGGAAGTGACCCCTACCCCCGCACAGCACCCTGTGGCCGACGCTGCGGCGCCC------ACCCCTGGGGTAATGCGGTGTACA--------------------------------------------CCAGATCGCCACCGCGGCGAGGCAGACTCACCGGC--CTCTCGCTGCCCAGGCAATATACAGAAGGCAGTTCCGGCTGCCGAGGAAGCCCCGCCCAA--CTGTCAATCGCCTA-------------------------CAGGGGCTGAGCCTTGCATAGAGGGCAGAGCCTGTAAAATG----------------------------CTTTGCTCCCCAGTG--TCTCTGCCCATTACACTTTAGTTAA--GTGACCAA---------------------AGGACCCATTATAATCTCCAACGCAGTCTGGGACTC------------CTTGGTCCTCCTTTCCAGGCCTCAACCACAACCCTCTGCCCATACCT---TTACCACCTGTCTTTTCAGTGTGATTGAATGGAGGTGTGAAATAAATGCTGAttttgttttgttttgttttgtttgtttgttttTTGTAAATTCAGTAGAGTTCCTTGGGCCTGTAGGAGTCCAACTGGAGCTCA----GAGAGCCTTGCACCCTGCCAGAATCT--GAATCTTGTGTGTTGTGTGCGCAGATGG--TGCCGTCCGCTAGTCAAGCGTGGCGGCATTTCAACCCCTT--TCAGTCTCCAGTTTTTATGCTGCGTGATTGACCTTCTGTGACCCACGTGATGCAGCCAA------CCTCAAAATCCCTACAAAAAACCAT-GAGACTAGATTTCTGATGGTGGCATCGT------------------------CTGGATAACGTCCTCCAGGAGGCAAGGCCAAT-----GCACATCTTT s bosTau2.chr29 32127070 1912 + 45822729 GCTTTTTTTGTTTTTTTAAACC-----------AGATTTCAg-------------------------------------------------------------------------------------------------ttaacca------------gagacaggactaggaccctagagccctaccagcccagacctgccccaaccttgg--------gctataaatcaatacaagtgcactaggctcaagtgtcctcgtctgtaagtaagagggttgTCCTCAACAAGTG-------CCAACGGTGCTCGCAGCAATTCTCTCAC-AGGATTCCTCTACTTCGATAGAAGACCCTTCTCACCTGTAGTGGAAATGCACGGGGCTGAGGTGGCTGACTGTCGGCATATAGGAATAGTAGAAGGAGCCATAGAGGAAGACAGACACCCAGAGCAGGAGGAGGATGGTACAGAAGAACACTCCAAACTGCAGTAGCAGCTTGCGGGCACGGCCTGCCATGACGTGGCCCATCTCCTGGGCCCACAGTAAGGCAGGTACTGGTGGGTCATTGACCATGACGGGGAGTGCAGGGGGTCTGGCCCCGGGTTCAGGCTTTGGGTTCCTAGGTGCTTTGCCACCTGGACGCCACTCCTGGCCATGGGACGAAGCAGCTGGTGGTTCCTGGAAAAAGACCGAGAAGGGGAAAGAATGGCTCGTTTCACGCGGGAGGTGAAGACAAAAAGGACACACTGACCAGAAAGCCTTTGAGGAACCAGAGACAGCAAGACATAGCAAAGCCTTTGTTTTATATGGCTTTTCTCCAACTGATTGTGTTTCTCAGCCAATTATCCCTTC-CCTTCCTCCACCGAGCTTTCTCACCACCCCCCTGTGCTAGAGTTCCTCAGTTGAACCCATCCTCGGGTCACCTGATTCTAGGACAGGCCACTTTGATGGTCATTCATAGAAACATATTACATACAGAGGATGAACGCCTTAAAATTCTTCTAAGGCGGACTTATGCACACGATTCCACACTGCGAGGTGGCTGCACGGAGAGTTCGCGACCTGCCTAAGGTCGCACAGCTG--------GACTCAAAGCCAGCAACCTCACCGCAGCCACTATTGCTTCCCA--AGTTGCTTCTCTCCTCCTCGAGCTGCGCTCGCTCCCAGACAA---GACCGCG--CCAGGCAGGGTGTCCTGCGGCCAACG--GCCGCTCCCCGCCAGACCCCTCCGGTTCGGTGACGGGCACGGCGCCCGGAGTCCCCACGCAACCGCACCACCATAGAAACCATCCAGCCCGCAGCCGCGGCTCCGCAGACTCACCAGCCACGCGCGCTGCCAGGGCAACGGCGAGAAGGCTCTTCCGCCTCCCAGGGAAGTCCCGCCCCCTTCCGCCGGCCGCCTCTGTAGCGCAGGGGAGCGGGGTTCGTCCGGGGCGGGGCCCAGCGCAGGGGGCGGGGCCTTCTAGGAGGCCAGGTTCCCACCTCCAAGCGCCGGCTCTCTCCCTCCCCGTGGTCCGTTGCCCCCTCCCCTTTTGGTAACCAAAACCAAAGCGGATAGGCATCTCCCTCTAGGCTCCAAGATATGCTCCAGGAAATGCTATGAGTCAGCAGCATCCCTCCCAGCCAGCCCCTTGAGGCCGCAATCGCGGCACTCCGCCTACACCTTCATTATCATTTAACCCCAAAATGGGGGAGAA-GCGGGCGTCTAACAGGCGCTGATTTTT---------------------------------ATTGCGCACATCTCCTTGGGCTTCCAAGG---CAGAGAGCATTCACCCCGAGAACGTTGCAATCTGCAGGTACCTGGGAATTTTGCGTGATGCCCCGGCGGGCTGGCTGGCACCTGCT-GACAAGAGTGGTAGCATTTCAGGCCCGTGACTTGTCTCCAGCTTTAAAGACGCGTCATCGACCTCCTGCGACCC--------TAACCAGACTTTTTCTCTGAGTTCCCACAGCGCATTATCTAGACTAGGTCTTGGTGGGTGGCTCTTTCTATTTTGTATGTGTCTATTCACCCTAAACAAGATTCCTCGGAGGGTAGGGTCAGTGTTGCGCACATCTTT a score=88084 s mm7.chr19_random 1474940 2541 + 2598976 TCCGAGAAGCCCACCTGTGTTCACAACATTCACACTAACTCTCGTGGCAAGGTGCCTTACCTCGTCTTTGTCTGATCCTTTGATCTGGTCTCTGCATGTCTCTCTTGCCCCAGCTTCTCTTCTTTGATGTATCATTTCTTTAGCTATCTTCCTGATGG-----GTTACCTCTGGGTCTCCCAGCTCGCGTCACTCACGTGGTAGAAAGTGGTGATCTAGAAGCTGATCACCTGTAGAGTGTTACATTTTCCTAGCTCTGAAGAACGGTGGGTCACTG--AAAGAAACCAAGATTCAGGTGCTAAGTGCTGTGTCAgggt---gggggtgggggtgg-gggAGCAGCAGCCCAGCTGATGTCAGACTTTCAAATGAGCAGGGTCTTCCGCAGTGGGGACAGACTCTAATGCAGGGGCTGTCACAGGCCCAGACCACCCCATTTGAGAGGGGAGCCTGCTT---------CTGCCTCAGGC-CCTTTGGGGAGCTATCTAGTTTAGACTAAGGACTTGTACAAT-GGCAGGGGCAGGTAGTGAGAGAGCAGCAGTGAGGGTGTGCACAGGGGATGCAAACAGCAGACTGACTCCCCCACTGTCCAGGCAGTTGGTATGCGCCAGAATC--AGCAGCTCCTTCTAGCATCCTTCATCCTTCAGGTACCAGCCATCTGGGCAGAACTTAAGCTGTGGAGACTGAGACCACCCCTCCAAGGATCTC--GTCTGAGCATCTCTAGTGACCTTCTCTGCATTAACTGTCAGTGCTA------CGGATATTTTTAGCTCCAAGTCCTGGCAGGGT-GGGGCACCTATCTGAGGC---AGGGTTTGGTGCCCCCTCCCCACTGACCCTACATCCCTGG-CTGCCGCTG-CTGTTACTTCAGGTGAGTAGAAAGCAGC---TTTTTTTCTCTTCAGGGCTTGAGGGGGGACAGGTGGCTGATGTGA---TTTCATCAGGGTGGGGCTCTTTCTGACTGAGGCTTTCATTGCTGGTAACATATTTGGCTCAAAGACTTAAAATCCTTAAATCGTTTGTATAATTTGATGACCAGGA-CCCAG---------GGGTTAGGAGAATATTTCATTTTATCTTCTCCATTCTCCCTACTTaaaaaa-----aaaaaaaaaa-------------------aagaaagaaaaaaaaaCCTGGG--------------------ATGGCCACTGGAG---AATGGGGGCACAATCCCAGGTGTGTGGTTGTGAAGAGCTGAGTG------TTTCAGCTGACTGTCTTTACTCCAGGATGAAAGGGGAGACCCCCGTTAACAGCACTATGAGTATTGGTCAAGCACGCAAGATGGTGGAACAGCTTAAGATTGAGGCCAGCTTGTGCCGGATAAAGGTGGGTGCGACCCTGGCTCCCATCAGCCCTTCAGGGCTCAGCTGTGGGTTTGCAATACCCTCCCCTCCCCCCTCCCCCCAAG---AAAAGATGCTTCTTTTC-TTGACACCCTGAGGTCAGTGGCAGAAACTGGGC-TTTGTCAGCAAAGTTGTTCCCGAGGACT-----GGCGTTGGGGGAGAGGGCTGTCTCAAAGGGCACTAGAAAC--AAAAAGATAGTCTA-TTGGAGAAGAGAACTGCAGTCCCTTTCAGGAATTCTGGTTAATGTATCCCTTCCTGGCTGGGTTCCAGGTGTCCAAGGCAGCAGCAGACCTGATGACATACTGTGATGCCCACGCTTGTGAGGACCCCCTCATCACTCCTGTGCCCACTTCCGAGAACCCCTTCCGGGAGAAGAAGTTCTTCTGTGCGCTCCTCTGAAGAGCGGTGGACCTCCTCTGAACTCATCG-----CCCCCTCCCAGACCCGCCC----TTAGATTGGAAATTGTAGTAGATCAC--------------TTCTACCC---GCATTTACCCG-------GAGATTATTTGAAGCACAAGGCCCTCCTTACCCATGTCTAC----CCCATCTCCTCACCCTTTCAGGCTAACTCCAAGCACCTTCT-----------------ACTCTATCTATAAAGGGACCCCGCTAAACTGCCAAAATCCTGCCTGTTTCCCTCGGTGATCCATCCGTTCAGGCAATGGAGAGGGGGAT-GCCCGGGTGCTCA-------------CCTGGAGCTAT--GAAAGGTAAAGGCATTTGAAGAATAAAGTCATTCAGAGCCTCAGAGGACAACGTCTGTGTTAGCGTTCTT-GGGAAAGAGGATCCTTAATCGATACA-----------------------------CTTGCCATATCCAGGGAACAGGGCCAGTC-GAGCCCGTTAGACATTGTA-AGGATTGGAGATC---------GCAAAGTATAAGGTGCCCGAGCGCCCCCAGTGG-GGGGTTGTTA-AAACGAGCGCTCAGAAGCCGCGGAG----------CATTCACACGAGCGCGCAACGTAAGC-GGCGAGAACCACACAAGGGCGAGCAGGGTGGGTTTCCGCAGG-----CCCAGG---------GACAGCAG--CCCCGGGGGGAGGTG----GCCCGAG---AGGCCGTGGGGCGGGAC-------------AGGGCGACTCGG--CGCGGCAGCCAATGCCCAAGATGGCGGCTGCC----TGTTCGTACCCGCATGGAG---GCACG-----------------------------CGCCGAGGGTGCTCTTAAAATGGCGGTCC-------CCAGCGTTCCCAATAGGGAACGATCCCTTATGCGATCCTCTGGTCTTAAAATGGCTGCCCCTGCCCTCTCAAAGTCAGAGTCAGGTTCTCTGTCCCATAGAATCTGGA s bosTau2.chr29 32129077 2789 + 45822729 TCCAGTAAGCCCATCTATTTCCAGAA-ACACCCACCGACTCTC-----------CCCTACCTCTTCTTTGTCGGATTCTTTGATCTGGTCTCTGCATGCCTCTTTTTCCCCAGCTTCTTCTCTTTGGTCTGCCATTTCTTCAGACATCCTTCTGATGGACCTTGCTGCCCTTGGATTTTCCA-CTTGTAGCTAGAACGTT-----AAGTGGTGATCTAGAAGCTGA-AACCTGTAGCTCATCACATTTTCCTGGATATGGGGAATGGAGGGTCCCTGGAAGAGAAACGAAGATTCAGGTGCTAAATGCTGTGTCAGAGTAGAGGGAGGAGGGATGGAGGGGGCGACTGGCCAGCTGATGTCAGAATTTCAAATGAGCAGGGTCTCACGCAGTCTGTACTGACTTCACTGCAGGGGCTGTCACAGGTCCAGACCACCCCATTTGAGGGGGGTGTCTGCCTGGGGCTCAGCTACTTCCAGCTCCTTTGGGGAGGGCTCTAGCCCAGACTCTGGATGCCTGCTATGGGGAAGGGCAGGCAGTGAGACAGTAACAGTGGGGGTGTGCACAGGGGCTGCAGGCAGCAGCCAGGCTCCCCCACTGGCCAGACAGTTGGTATATGCCAGGATCTGAGCTGCTCCTTCTAGCATCCTTCATCCTTCAGGTATCAGC--------TAGTGCTGGAGCTGCAGAAACAGGGACCAGCCCTCCACTGGCCTCTGACCTGACCCTCTCCAGTGGCCTTCTCTGTATTAGCTGCCTCTGCTGCTGCGTCAGATACTCTCAGCTGCAACTCCCTGCAAGGTGGGGGCACCCATCTCAGGCAGAAGGTTTTGGTGCA----CCCCACTGATCAGATTCCCCAGGACTGTCGCTGCCTGTGGCCTCAGGTGAGTAAGGAGCATCCGGCTTTTCTCCCTTTGGGGCTCAAGGGGGCAGGTGGGGGTTATGTGCCCTCCTCATTAGGGCGGGGCTCTTTATAGTTGTGGTTTTCAGAGCTGGGAACACA--TAGCTTGAGGGCTGTAAAGCCTGCAGTCATCCATAT-GTTTAATGATCTGAAGCCCAGCCCTTGTACGAGTTTGG-GAGCATCTCACTTCA-CTTCTCTATT-TCCTTAGCTGAGGAACTGGGAGATGGGAAAGGCCAGGGAGGTTGGGGATAAGAGAGGAGTAAAATATTAGGGCATATGACCCAGCCTTGCAATGGTTGATGAGGCGTAATGGGGGAAGGGACCTTCAGCTGAGATTGTGCAGGGCCCTCTAGCACGCTCTGAGCTGTC--TCTTTCCTCCAGGATGAAAGGGGAGACCCCTGTGAACAGCACTATGAGTATTGGGCAAGCCCGCAAGATGGTGGAACAGCTTAAGATTGAAGCCAGCTTGTGCCGGATAAAGGTGGGTGGGGCCCTGGATCCCATTAG-----------------------TTGGAAGGCTGTACCTAGGTACCCAAACCTGAGGCTAAGAGAGGCTTTCTTTCACTGACTCCTTAAGATCATGGAAGGAGTCTTGGCGTCTGTAAGGAAAGCTGGCTCC-AGGTCTCTGTGGGTGCTGAGG--GAAGACTGTCTTACGAAGTCCTAAAGATCGCAAAAGATAATCTGTTTGGGGAAGGAGGCTGCAGCCCCCTTCGGGATTTCTGGCTAACAATTCCCCTCCTGGCTGTGCCCCAGGTGTCCAAGGCAGCAGCAGACCTGATGACTTACTGTGATGCCCACGCCTGTGAGGATCCCCTCATCACCCCTGTGCCCACTTCGGAGAACCCCTTCCGGGAGAAGAAATTCTTCTGTGCTCTCCTCTGAGCTGCCCTGTTCCTCTTCACAACTCTTCACCTTTCCCTCTCCCGGGCCCTTCCTTATTTATGTCAGTAACTGTCGTGAGCCCCCGAGGATTCCTGCATCCCACCCCTAGCCCTTGCCCAACCCTGTGAGGTTATCTGAAGCCCAAGCCCTCCCTCACC--TGTCTGCTGATTCCATTTCCTTGCCCACTGTGGCAGACCCAAAGCAGCCTGTGACTCGGGGCACCCGTAGCTCCACCCACAGAAGGGCTGTCAGACTCTGTCAGCGTCCCGCCGGCTTCCCTCTGTG----ACCCGCTCAGACAATGGAGAGAGGGATGGGCTGGGTGCTTGCTCTCAGTCTCACCTTGAAGCTATTGGGAGGCTAAAGCCATGTGAAGAATAAAGTCATCCCGAGTCTCAGAGGACAGCTCCGGTGTTACCGTTCTTGGGGGGAGAGGCTCATCAGTCAATAGATTCGGTGGTGGGTGCGATAGGTAGAAAAGCTTGCCATAACTAGGGAACGGGGCCAGTCAAAGCGCGTTAGACATTCTCTAGGATCAGAGATCCGTCGGGTTAGAGGGGATGGAGAGCAAAAGGGTCTCAAGTGGAAGAACTGTTACAAACAGGCACTCAGAGGCTACAGAGAGCACTCCTACACGTACACAAGAACGCAATGAAGACAAATGAAAAAGAAAACAGACCGAACCGGGTGAACTTAGGAAGGGATTCCCGAGGGAAGTCGAAGACAGGAGGTACCCAGCGAGAGGGGAGGAGCTCAATTCCAGTTCCTGAGGAGGGGCCGGTTTTACTTCTAAGATGGCTGCGCCCACAGCAGGCCCCCTCCAAGATGGCCGCCGCCATGGGGCCCGCGCCAATACGGCGGCCGCACGTCACAGCGTTGCACCGTACAGGGCTTCTCCGCTGGGCCCATACTTAAAATGGCGGCCCCAGGCATCCAGCGGTCTCAATATGG-----TCCCTTCCGTGCTCATCT-GTCTCAAAATGGCTGCCTGTGTCCGCGCCAACTCGATACCTACTTCTCCCCAACCCGGAGGCTGGA a score=4142 s mm7.chr19_random 1478468 361 + 2598976 CTTTGCTCCTTCTTTCTTGTGAAAACCCCAGGAAGGATC---CTTGTTATAATCCCTGCCTGCTTACAATGTCTAGAATGCAATAGGTGCCTAA-TACCTAATGAA-------------------------TGTTTTTTTCTATGTGTATATGCTTAAACTGTACACAGGGAGTAGCAAGAGACTAAAAAGACTAATCTCTATCAGCTCAGATGTGGTAAAAAGCCAAAAGTGCTTAAAATGTGTTATTAG-----GTTAATCCTTGCCCTACCTTATCCTCTAAA---ATACCCATCTTAGTTTT--CTCATGCAATTTGATACCTATTCAAATTAGGAGTGACTATCTG--------GTTGAGGAGAACCAG-----GCCTAGCAACTCGTACAGACAAGGTGTAAGCTGT s bosTau2.chr29 32133077 402 + 45822729 CTTAGTTCTTAGTGCCTGTTGAAAACTCCTCGAAGGATCAAGTTTTTTTTAATTTCTGCATCCTGTcagtgtctggcatatagcaggcatttaaatatctAACAAAATGGCAAGCAGGGCATAAAACAATCTCTCTTTTCCTGT-----TAT-----CACAGTGTTGGGCAAATTCCAGAAGAGTAAGTGAAAATTTCCACATCAGCTCACACTTCATAAAAAATCAGGAGTACTCAAAAAATGTACTTGATGTTTGTttgttgttgttgt-tgttgttTTTTAAAAGCAGCCTCTGCTCAGTTCTACATACTGGATTTTCATAACTCATCAGATTAGATGTGAATGTCTGCAGCCCTAGTTAGGGAAAGGGTGGGGGTGATTAGAGGTTAATAGAGACAAGGCATAAGCTAT a score=204755 s mm7.chr19_random 1480610 4509 + 2598976 CCAGTCAGTGCAGCCACAGGAGATA-GGAAAATTCAATCCAAATGGTTATTTATTCTAAAACTGG-AACTACTGTGTCTACATTTTTTGCCAGAATGGTGTAATGAGAACAGGGTAAGAG----TTACATATGTAAACAATGACACAGTTACATTTTTAAAAA----TGGAACCCCCCTCCCCCGTTTTTTTACTGGCCACTTCCAAGAATGCTTTACAGGTTGTGCAAAAACATTTACAGGCTCCATGTGGTGTTTGTTTGTTT-ACAAGCTTTTCCATCTACAACTACAACAGACATCTGATAAAACACTAAACAACTCTTTTAAGGAAAACAAAACCAGGGATTCCTCTTATTACCATAATCTACACCCCACACCCGTCCCAATAACATTTCTTTT---------CATAATAAAAACACAAGACAGAAACAAAATGCAGACGTCCACT-TTGATGCAGGAGACCTCCTGAACAGACCCAACAAGGATGTGGCAGTGTCATTCTCCATTCCACTAGAAAAACAGCTTTTTTTAAAAAAAAGGACTTTGACTTTTCTGGTGTTGAAAATCAACAGCGAGTATACTCTCTGACCCATGTTGCCTCAAA----CTTCAGTGTTAAGTTTTTGCACTTT-------TGAGGGCTCTACCACCTAAAATC------CAGATCACAGAGTACCGTCAAAGTATTATTTGTTGGAGGACTAAACATCTGAAGGGA-----CAGCTTCTGCCTCTGGAAATTAAGTTTCCTATTCTAACATAATCTTCTTCTAAGGGGATTTCTTTGGGCTCCAGTTTCTATCTTCCTGCCCTGACATTATAAACAAT---GCTTTCTTGAACTCCCTTTCTAAT-------ACCAGCGAGTTACAAAAGA-TGCATGCAATCATTCCACCCACTGCCACACACAAACCCATCTGTGGCACCATAGGGACAAGTGCAATAGAAAAGA--------CACAGTATG--AGCACGCTTCTCTCCTCCCAG-GCCCACTGCAGCCTT--GGAAAGAGGTCCTTG---AGCAGAACGGTGTGTCCTA-ACAAACCA----GGACTCAGAATGAG-GTCTGCACACCCTGAGAAGCCTTGCCTGCGTGGGAAGGACATCAGGACAGGGAAGAT---TCAAATCTCAGCACAAG-TTTAAACAAGAGAACTGCTCAGGCAAGGAAGTGGAAGTGAAGTATGTCCTAGTAACTCAGCCCAGAGATTTTCTCACCAGGAAGTGT-----TGTAGGATGCTGTTGCTGAGTAAGCTTTTAGCTAA-----------GCAAGATGATGATTTAAA-TTGAAGATCAATATTGAAAGCGCATTGCTATATCCTGCTCACATTCTTGAACCCAGCAACCTGTAGCTATTCTGTCAAGAACTGGGAGGGTGTTGTTAAAGTTACAAACTATATGATCCCAAATGAAGTCTCTTGATAAGAGGCCTCTCTGAGGACTTGAAGGGAAG-CACCCTTGAAGGAATCCTGTTTCAACAAGTTGGGAAAAGGTGTTTCCTTGCACACACCCATACACACATTCACATAGTCTTTCCAAGTTTCTGCAGCCCAACTGAGCTGCCTCCTAACCCCACAACCCCTTTCT---------ACTCTCTACCTGTGTATCaaaacaaaaacaaaaacaaaaaACAGCAGCAGGGCAGAGCCCCCTACATTGTATAAAATAGTTGCAATTCTCAGCACCTGGGCCTGACAGCCCACACCACAGGATTCACCTATATACATATCTTGACGCAGTAAACAAAAGTCTTGCTGCGTTTCTGTG--AGCTGAAACCCTGAGAATCATTCCTTCCCTCACACTTGTAAGAGGCAGGCAATATTA-GTAAATGATTCCAGAGATCTCTTGCCTCTATCAAC-TAGGAAGACA-GAGACTAGGGACTGGCAAATCACCATCTTCAGACTAAGGGCTGTGTTCCCA--CCCTCCTCCAGACTTTATAGGAATTTACTGAATATAATATAGATAGG-GACAAAGTATTATGCTCTGCAGTCCCCAAGAGCCCCCGTTCCCCCTTGGCCTGGGAATCCTATATACTAGAACCACCCAACTAGCAGTCTCTGTGCCTTAGGCAGACAGCACAAAGGCACAA-----TATAAGTGGACAATCTATTACCTC----------------AATAGCCCAAGAAGGAAAGGTTGGTAAAGAAAATACAAACGGTTAGTTGGTGCAAGTGATTCATAACAGCCAATTGTTTATTTCCACTGCCCTGTTCACAGGCACCCCCTCTGCCCCTGCTCCTGTCTCCTCTGTTTCCGCTCCTAACTGCTAGCAGATTCCCTC--ATGCTGTTCCCCTTCTCCCCA---------CAACACTCTCCCTTACTGGGCTACCAATCCACCTGTCTTAGAATGCTGGA--GGTGTCATTTTTAGTTCTTTTCCTATCCAGCTGCAGGGTACA--GAATAGGCAGCTCTAAGTGCTGCTTTCTGTGCAAACGGTTTTTTT---GATTACAAATAACCTAACTAGGTTTGAAATGTTTTATAGAATAAGACAATATTTTTTTCAACAAACTTTAAAAAAAATGTACAGTTTTGTT-------TCCAC-TCCCCCCTCCCCCACCCCTACTTGCACACCCTCCCCCCAACCACCCCTCCCTGGCAGCTCAGCCCCACCCCGACAGCCCCTGTTTTCCTTGGTTGTGTTTTAGGGGGTGCCTGGCACCCCCAAAGATTCAGCTTCATGGCTGACAGGCGAAAACAGCAGGGGCTTCACCGATACCCTTGGTAACCGTAGTAATTCCTGTAGTATCGGTCTCTGTCCTGTTGGTGGTGGTAGTAGTAATTCTGCCACTAGAAGAGAGGGAA-ACCCCATCACTTAGAGCCAGAGCTGGCTGACGATGAAGAGGCACGACACTCATCCATCCAGCGGGTCCTGTCCCCTTCACCCTCAATCTAC-CCAAGATAATACTCACATCCCGGTTGTATTG---TCTGTAATAGTCTCTGTATCTGTTGTACTCATAATCTCGACTGTAGAATCGTTCATAGTCACCTCTGTATCGATCATAGAAATTACGGTAGCCCTGAGGAAGGAGAGAGAGGAGTGTTGACGATATATGGGTCTTCAAAAGTACACCCCAGT----TTCCCATTACTGAACAAGAAATATTTCATCTCGACACTGTAAGCAGGGTAAATTCTTTTCCCGGGTTAAATTCTTCCAGATAAACATATTAAGTGGGCAAAACCCTAAAGCCCTAAGAAAACAGCCCAAACCCCTCTGCTCCCCCAAGTCAATAGGAATGGCT-TCACAGCCCAGAGGGAGGAGCAGAAGGAGAGCTGCACTCACCCCTCTGTTTCCAGACTGCCCCCAGTACTGCTGCCCGTAGGCCCGGTTGTCGTAGCCTCGGCGCTGCCCGCCCACTGGAAGAGAAATGGAGAGGGCGCTCAGACAGCTGGCATGGGGTCCTGGCTCCACATCTGAGTGGAAATCAAAAAGCTGGAGCCAAAGGCAATACTACGGGAGGAGGAGGCTTGCTCTGGCCTGGCTCACACACTGTTAATTAAAGCACCAGCCAGGATCTTTTATTAAAAGAGTCTGAGAGGGGAGGGCACAAGAATAGACAC---AAGAAAACAAAGCCACCCTGA-------TTCTGAAGCTCTCCAATCCTGCAAAAACATCTTAGATGACAAAAGGATACATGGCAGATGTAGAAACGTGAGTAAAAACTGCCACTCAC--AGGATCAGACTCTCAGCCCAGAAAGGGGTCAGAGATGTCTGTCATATAGCCTATACCTATCACTGTACAGAAAGAAAACAAAATCTGCATTAATCAAG---------GCTAGGAAC--CCGTTATTCCCAGTGTCTAGGACATAGCTAGCACT-----AACCACCTTCTGATTTAC------AGTTGCACACACATAAACACATACTTTAAAAAGAGCAATTATAAATATACACTG---------------GGGATTTAACTGACAAACTAACTAGAC-ATTCTGAGGGAAAATTAATCCCACTAATAA-CTAACTTCCTTTGTAACAATCTAAAACGAGGAAGAATCCATTCAGTTTT--GTCTGTGAAACTGGACTGATTTAATAAAGCATCAAGTGATCTTAAGATGAGAATTAGATCTCACTGCAC--ATCCTTAAG----ACTGCA---GTGAAGTGGGGAACCAACTTGCTTGCCTGCATGGAAACCAGGCATATGAGGAGGCTC-TGTACTG--TTTCAAGGGA--TGGTATTTCTGCCCCCCAGTAACTATTTTCTGGCTGAAAGACTATGGGGAAAGCTTATGAAGCAGGGGGTAAAGGGCACAACAAGAAGAAAGAAGCTTCATCAGGAAAGCTGCTCACTGT--------------------------------------------------------------------------GGGCAGCCAGGTCTCTAGGACTCACCATAGCCTTGGCCTCGGCTTCGGTTCTGCCGGTTTCTCTTGTTGCGGTTGTTCCGGCGGTTTGTACGCTTCTCAGAGGGGGGCAGTAGCTTCCTTGCTTCCTCCTTGTATTTAGTAACAATGGGTTGAGCTTCCTCTTTTTCCAGCTCCCCATATGTCACCTCATCCATATAGTCGCATTTCTCAGGCAGAGAGAAGTTGGCTATAAGAATAAGAGAGAAGCT-TGTGGGCCTAGAAAGTGCACAGACAGGGTAAGAATGCAT----GAAAATCTACCAGAGGAAGCATA s bosTau2.chr29 32134423 4618 + 45822729 CCAGTCAGTGCAGCCACAGAAGAGAAGGTGAATTCAATCCAAATGGTTATTTATTCTAAAACTGGTAGCTACCGTGCCTACATTTTT-GCCAGAATGTTGTAATGAGAACAGGGGAGGAGAAAGTTACAGATGTAAACAATGACACAGTTACATTTTTTTAAAACGGTAAAACCC----------TTTTTTTACTGGCCACTTCCAAGAATGCTTTACAGGTTGTGCAAAAACATTTACAGGCTCCATGTGGTGGTTGTTTTTCTCACAAGCTTTTCCACCTACAAC------AGACGTCTGATAAAACACTAAACAAGTCTTCTAAGGAAAACAAGGCTAGGGATCCCTCCTGTTA-----ATCCACATTTC----CCCCCTTAACATTGTTTTTTTTTTTTTTCCCCATAATAAAAAGACA-GACACAAACAAAACCCAGACATCTACTGTTGTTGCGAGTGATCTCTTGGACTAAACTGACAAGGACGTGGCAGTTTCACTCTCCACCCACCTAGAAAGA--GCTTTTTATGAAAAGA-------TGACTTTCC-AGTGTCAAAAGTGAACAGCAAGTACCCCCCGCCCCCCAAAAAAACCCAAAGCGGCTTAAATTCT--GTCCTTCCCCCTCCCCGCCCTGAGGGCCTAGCATTCCCACACCGTGCTGTAGATTATAAA--------AAGATGCTATTTGCTGCAGGACTAAACATTTGAATAGGGCTGGCAGTTTCTGCC---AGAGAGTCCATTTTCTGTTATAATCTTGCCCTCCCTAAGGGGAATCTCTTTGGGCTCCAGTTTTTATCTCCTTGCCCTGACACTATAAGCACTAAAGCTTTCTCGAACACTCCCCTTAATGGTAATAAAAAGTGGGTTACAGAAAACTTCAGGCAATCACTTCACCCACTGCCACACACAAACCCA---------CAGAAGCAGCAGGTGTCCGAAGAAAGAGAGGATGTCACGGTGAGCAAGCAAACATATTGCCTACCAGCACCCATTCCAGCCTCTGGGTCAGAGGTCCTGGTGGAGCAGAA--GGGTGTCCTAGACAGGTGATTAGAGGGCCAGAACCAGAGCCTGTGCACCCT------CCTGG---GCACGGCAGTAACCGTGGGAGAGGGAAAGGAGATCGAATCTCAGCACAAAATTTTCAGCAGAGGACTGCCCAGGTAAGGAAGTGGAAGTGAAGTGTTTTCTGGTAGCACAACCTGGGAGTCCCCTC-CCAGGAAGTACAGCAATGTGAGGTGTT--TGCTGAGTAAGCTCTTGGCTGATGCAATGCTGAGCAGGAAGGTGAATGAAAACTGAAGCTCAGTATCCAAAGAGCATTCCCCCATCCCACCCATATTCTTGAACC-AGCGACCTGAAGCT-----GTCAAGAACTAGGAGGGTGTCGGTAAAGTTAC---------TATCCCAACTGAAGTCTCTTGGCTAGATGTCTCTCTG-GGCCACGCAGGGAAGATGCCCCAGGAGGAATCCTGTTGCCACAAGTCAGGAAAGGGTGCTCCTGTGCATGCAC--ACGCTCACATTCACGC--TCTTCCCAAGTTCCGGCAGCCCCACTGAGCTGCCTCCCACCCCCCCCACCCTCCCCTTTTCTAGTCACTCTCTACCTGTGTATCAAAA---------------AAGCCAGCA--CGGCCCTGGCCCTCCACACTGTATAAAATAGTCGCTATTCTCAGCACCTGGGCCCAGTAGCCCACACCACAGGATTCACCTATATACATATCCTGCTGCAGTGAA-AAGAATCCTGCTTCGTTTCTGTGTGAGCTGAAACCCTGAGAAACGTTCCTTCTCTAGAACTAGAAGAGGACAGATTCTCTAACAGAGATGATTTCAGAGACTTCCCGCCTGTCTCAGCCTTGGAAGACAAGAGAGCAGAGACCGGCAGATCACCATCTTCAGACTGGGGGCTGTAATCCCAACTCTTCTTCCAGATTTTATGGAAATCCAT--AAACGGGTACAGAGAGGCTACAAACTATTCTACTCTCCAGTCACCAACAGTCCCCATGCCTCCCTGGCCTGGGGATCCTATATAATAGAACCACCCAATTGGTAG---CTTGGCCTTGGCCGAACAGCACAGAGGCACAGGCACGTGGAGATAGGGACACTATGGCCTCCCAGCCCACCGGACCAGATATCCCGAGAGGGAAAGGTCGGTAAAGAAAATACAAACGGTTAGTTGGTGCAAGTGATTGATAAGAGCCAATCGTTTATTTTCACTGCCCCAGTCACAAGCTTGCTCTCTGCCCC-GCTCCTGCCTGCT---------------GCGGAGAGTGGGCACCCTCGAACGCTTCCCACCCTCTCCGCATCACCTCACCATCACTCTCCCTTACTCAGCTGCCAGTCCAGCTGCCTTAGAATATCAGAAGGGTGACATATTCAGTTCTTT-CCTGTCCGACTGCAGGGTATATAGGACAGGCAGCCCTAAGTGCTGCTTTCTGAGCAAATGTTTTTTTTTTTGATTACAAATA-TCTAACTAGGTTTGAAATGTTTTATAGAATAAGACAATATTCTTTTCAACAAACTTTAAAAAAAATGTACAGTTTTGTTGTTTGTTTccacctcccccctcccccacccctgcttgcgcaccctcccccca-ccgcccctccccGGCAGCTCAGCCCCACCCCGACAGCCCCTGTTTTCCTTGGTTGTGTTTTGAGGGGTGCTTGGCACCCCCAGAGATTCAGCTTCGTGGCTGACAGGCGACAATGGCAGGGGCTTCACCGATACCCTTGGTAACCGTAGTAGTTCCTGTAGTATCGGTCTCTGTCCTGGGGATGGTGGTAGTAGTAATTCTGCCACTAGAAGAGAGGGGAGACCCTGTCACGTGGAGCCACATCGGGCTGAGGACAGAGAGGCACAATACTCCTCCCCCT-----GTCCTGCCCGCCCCTTCATCTCTCCATTCCCAGATGATACTTACATCCCGGGTATACTGGTGTCTGTAATAGTCTCTGTATCTGTTGTACTCATAATCTCGCCCATAGAATCGATCGTAGTCTCCCCTGTACCGATCGTAGAAGTTACGGTAACCCTGAGAAAAG-GAGAGAGGAGTG---AAGATGCATGGGTCTGTAGCATCACAATCCACTGCTATCCCCCATCTTAAATGAGATATATCTTTGCTTCGTATTATATACAGGTT---TCATCTTCCCAGGATAAATTCTGCCAGATGAACAAATTAAACAGGCAAAACCCTAA-GCCCTGAGGAAACAGCCCAAACCACTCTGCTCCCCAAAGCCAACAGGAATGGCTGTCACGGCCCAGAGGGAGGAGCAGAAGGAGAGCTGCACTCACCCCTCTGTTTCCAGACTGCCCCCAGCACTGCTGCCCGTAGGCCCGGTTGTCGTAGCCTCGGCGCTGCCCGCCCACTGGAAGAGAAATGGAGAGCGCGCTCAGACAGCTGGCATGGGGTCCTGGCTCCACATCTGAGTGGAAATCAAAAAGTCGGAGCCAAAGGCAATTCTGGGGGAATAGGAGGCCTGCTTCTGTCAGGCTCACACAATGTTAATTAAAGCACCAGCCAGGATCTTTT----AAAAAGTCTGAGGGGGGAAGGCAGAGGAATAGAGACATAAGAAAAACTAAGCCACCTTGGTTTCACTTTTTGAAGCTCCCCAATTCCTGCAAAACATTTAAGATGGC-AAAGGACACATGGCAGAGTTAGAAACACGAGT-GAAACTGCCACtcgtggaggtgcagactttcagccctggaagcgatc----ttgggtatcatgcagcccaaacc---cattttacacaact-gaacaaaGTCTAAAT--GTCAAGCTCTTCCACAGCAGGAACTGCTTGTATTTCcagggcctagcacatagcaaacactcaaaaaattttttgctgaCTTACACTTAAAATTacacacacacacacacacac----------acacaTTTGAATGCACACTGTGGGAAGGGGATCAAGGGAGTTAATTGACAA---AACTAGATAATTGAGAGAGGAAATTAATTCCACTAATAAGCTAACTTACTTCATAATCCCCCAAATTACTGAATAATGCATTCACTTTCTGATCTACATAGCTGGGTTGACCCAGTAGA----CAAA------GAAAAAAAGAATC--------CTGCACAAATCCTTCAGATAAACTACAAGCGTGAAGGGGGAATCCA-----TATGTAAAAATGAAAACT-GATAAATGTGCAGGTTCAAGCACTGCTCTTCAAGGAAACAAATACTTTTGTTGAAAAATAACTACCTTTTGTTT---CGATTATGGGAAAAGCACAAGAAGCTAGGAGTAAAGGAC---ACAGGAAGAAATAAGCTCCATAAAGGGATGTCCTTAATGTTGGTGGCCCGATGTGGTTGCCTGGCCTTTCCTGTGGGTCCAGCTGCACTTCACACAGAGAACAGACTGAGGTTAGGGCTGGCAGGTCCCCAGGACTTACCGTAGCCTTGGCCTCGGCTTCGGTTCTGCCGGTTACGCTTGTTTCGATTGTTCCGGCGGTTTGTCCGCTTCTCAGAGGGGGGCAGCAGCTTCCTTGCCTCCTCCTTGTATTTAGTGACAATGGGCTGAGCTTCCTCCTTCTCCAGCTCCCCATATGTCACCTCATCCATATAGTCGCATTTTTCAGGCAGAGAGAAGTTGGCTACAAGCGTAAGAGAGAAGCTCTGTGAGCCTC-CAACTGCAAAAAC-GGGTAATATCTCATAACGAAAACTCCACTACAGCAAGAACA a score=5821 s mm7.chr19_random 1486217 154 + 2598976 AAGTGCAATAGCACAAGATAAGGGGCTATCTGGAAACT--AGATTAACAAGTTCTTAAGTAATCTGCAATAGATTCGCAGTGAGC---------------TATCAGGA-------------ACACAGGCTAAATGTAATCGAGAAAGTTTTGGTGTTACTTAGAAAAAAACTGC----TCAggagaga s bosTau2.chr29 32139107 187 + 45822729 AACTGCAGCAGCCCCAGGCAAAGGGCTATCTGCAAACTGTAGATTTACAAGTTCTCAAGTGATCCATAATAAATTAAGAGTGAACTGGGTTAAGGTTCCTTATCAGGACAGAAGCAGGCAGCCAGAGGGTAAAAGTAACTGAGAAAGTTTTGGTG-TAGTTAGATAAGAAATACACTTTTAAAAGAGA a score=66941 s mm7.chr19_random 1486877 3097 + 2598976 TAAAGGCCTCTCATCTATCAGTTACACATGATGGCCAATTATACTATCTGCCTGTATTTGGACATCAAGTTCATAGACTGTGTCATAGTGAATTTGATTTCAATTA--------TGATTCTCACATTAATCCAGCTATCCGT--ATCTTATAAAACTGTACTAAATTCCTCCAAGTGCCTGAATAT---TTATTTGCCAGGTATGTTAAAATTAATTCTTA-TAAGTTCAGATGCTCCTGGTCATCGATATGAGAAGTGACTCCCACAGCCAGGGGTTAT--GAGTTTCCATAGCCAGCAGTTCACAGGG-TAAGTGGGCACCTA--AGCTAAAGGAAAAACGATGAAAAATACGATCTCAGG-----AGAACATGAAGCAAAAACAATGAACATATTTAACACTGCCTTAAAAGGA--------------CAGTACACTCAGGcaaataccaaa--tcaa----gaaaataaacaaaaatgaaaacaaaacataaacCTATTAGCACCCCAGAAATTAAGGCACAGAAGACAGACTTCTATCACTACTGTATTTAAATTTAAACCCAAACAATC--ATCCTTGCCATTTTCAT--GGAGTATCAA----TCCTAATTTTAAAATCTGAGTT--ATGAGGGTGAAG-TTCATTTCATATGCTGATATTTCCCAATGACGAGGGCAGTGCTGGACAAATAAGTAAATACCTCTT-------------TAAATCACTGACTCAAGCGCTTCCTTAACTTCAAGTATCTTGTTTGGATTTAAACATCTCATTTCTCATTCTACCATTtttttttgagacagcctctcatttagctcagattagcactcatcttccaagtgccgagattagaggcatgcatcaccCTGACTTTTTTCCAACCCCaaatatggtcctactgtatcaggatggtctctcctaactcatagtcttctttcctgaacatctcacgggctgggattacaagcacatgctgccatgtacagttATTTACCCCCTTGCTCTCTACTCATTAGTTTACCTACA-GTGGTTCTAACTATTAAATTGCTCTT-AAATGTACACCTTAGA--TGTGGAGAGTCACTCTTGGTGATAAGCA---------AGGT-TGCACTAACCAGGGAGTGGATTCTCTCATCCGTAAAATTCCAGCTCACCTTTCATCTCCAGCATTATAGACTCAGGCACATCATCTCCCTCCACTTCTTTCCTCAACTCCAGCCTCCTCTTCCAATCTTCCTCATTAGGAACAACTACCACCACCTTCCTGGAGAATGTCTTGAACAGCAGTAACTTCCTTCGTTGGCCAGAGTTGTACACATTACACTAGTAACAGGAGTAATAACATGT---TTAAGGTTAAAAGTCACTACTCAACTTA---TGAAAGAAAACTTTATCTTTATAACTAAAGCATCAGATTAGAAGTCAATACACAATTTCCTTTAATAATAATCACTATTATCATTGCGttgtggtaatcaggaccaaaactagagctctgcatatgctagaaaattgttctacccgtgagctataaccccCACTCTCCTTTAATTTTTGAGATACTACTTGACAA-ATGATatttcacatatcaggaaaactga-agttagagaggtaaaagacttgtccaaaagctaggatagattgaagaattcaaatggaatgaatgaatccaaatct--------cctttctctccat--------ctaccacctgagttcagacactctC-----AGTAAACTGTGTAAGTATATTACATAACTCACAAGCA-------------------GAGAGTCATTAGGTAACCTGAGTCTATTCCTTAATTCCGT-TCTACATGTGATCC-----------CAGACTAACTTTA---------------AAATAGATACAAGAT-TTTCATCTCTGG-----------------ATCCCCCTTGAATGTCTGTA---TACCTGATCAAGAATAAAATTCCTCTTTGATCGTGAAGCAATCTGGACCAGCTTACTAAGGCACTGGGAGGCTTGCTGAACTAAGAGGTCTCGGCTTTTGGGGTCCATCTCTGGCTCCTCAAGTCCCTTCATCTGATGAGT----------GAGAAATGCAAAGAGTTACACAGCAAGTTTAAGAGTCCAAGTcagagagacggagcatggcagggtaggagaagaaccaagatggttttggacatgtgtccgggtggcatttaccagccacaagtagctatgatttctcaaggttagaaatattgggataaagctcttatcattatcaattggctctgaaattattgtattggcatcttgtaaa-ttgtgatattattgatacataaatctgatggtttaaAAAAAAAAAAAAAGAGTCCAAAAGTCAACTATTCAAATTCTACAAGTGTCACATGAACTCATCACACTGTTAATTTCCTGTAGTAGTCACTTCTATATTTAACCTGGATTTATTT---------CAGATTGTAT--GTTTGCAGAAATTTGACAATCCAGGAGAGGTGGGGCATATCTTAACACACTGACAG------------TGTGTGGTGTCTTTGTTCTCATACACTTCAAAGACCCCCCCCATCCCTGACTAAGAACAGGCTATCAGAGATTTTCAGTGTCTCCACAGCAAACACCGTAGCTGACTAGTCACCTTTCCCCACCTCTCAGCAACTGACCCTCATTTGCGTGAGAACAGTCTCAGCTCCCAGAACATTGTATCTTCTCTCAGGGTTGTCTTTTGCGTATTTCAGTGCCCACTGGGTCTTTCCAGATCCAGGAAGTCCCACCATCAGAATCACCTGCAAGTAAA-AGAAACAGGAATGAAATAAAAAT---CAATCAAT------------TTTATAAAATCTTTCTTTAGAAAATCTTGTTATATTTTCCCTA--TCCAAGTTTGAAAGTACATATCCA---------CCACTCTCCTAAAGCATGAAGCCTAGA------------CTTGCGCATACCTCACACTCCTCTATGGTCTTGGGAGGGACTGCAGTCCGCACACGTTCCTCAACAGGCACAGCATGGATGAACACAAACTCTTCTGGTGGTGGGAAAAAGGGCTCCTCCTTCTGACCAAAGTTTAATTCTACGACACAATTCTTGCAAAGGACATGGGGTAGAAGGGCTCGATCTGCCAGAGACTCCTTGCTAATTCGGAATGCCACACCCAAGTCTTCTCCATTCTTGGAGAAGGAAAGCTCAACTTCTTCAGTCTCAAAATTCTACAAGGACAGAAGCACAGGAGCACGTGCAGGTTGATAGGCTTTAAGG s bosTau2.chr29 32139362 2727 + 45822729 TACAGGGGTCTCACTAACCACCTGTGTGGGATGGGCCAGCA---------CCAGTCTCTGGACATCAAGTTCAGAGGCTGAGTCCCCGTGGAACTCAGTTCAATGAGGTGCTCTTGATTGATAAGTGAATCCAATTAGCCCTTAGTTTCATAAAACTGAACTAAATTCCTCCAAGTGCCCCCAAATGAGTTAT------GGACTGGTCTAGTTCATTCTGAGTAAACTTGA--------GCTCTTTAGTGTGA-AACCAGCTCCCACGCCCAGGCATTATCAGAATTCAAAGAGCCAATAGCTGACGGCTCTGGGTGGGATGCCAGGAGCTGAAGGCAGCATGGGGAAAGAC-CAAACTCAGAGGTGAAGAGCAGAACTCCAGCTCAATAAAGAAGGTTAATATTGCCTTCCAGGGAACCTTGCTGTAAGGCTTTATAC---GGCACATACCAAAAATCAACACCAACAAACAACAAAAGTAAAAAACAAA-ACAAGCCTAAT-GTGATATAGAAATCAAAACA---------------------TACTGT---------TGAGATCATTCACTCCAACCTCTACCATTTCCATCTGAACCATCAGAATGTtccatctctagaatataaattcaatgaaggcagagcttcatttcattcatt---ctttccctaggtctagaactgtactggacaaata-gcagacactcctaagtatttactgaatgaataaCTGACTCA--CTCTGCCTTG------------------GGTTTTGATTATCCTGTGACCTATC--ACCATTTTTTTTT---------------------------------------------------------------------------TTTTTG-------------------TATTTTATCAGAATG----------AATCAAGGGGTTATTGCTTCACCATT------------------------------------------------------CATTCTGTTCATTCATTAATCCACAAGTGATCACATTCATTAATTTATTCCTCAGATTTATACTTTACACATGTGAAGAAT-GCTCCAGGTGCTAAGAGGCCCTAGGGAGGTGTGCATGGACCAAGGCCAGCAT-CTCTAACTCGTAGAGGTT-AGCCCACCTTTCATCTCCAGCATTATAGACTCAGGCACATCATCTCCCTCCACTTCCTTCCTCAGCTCCAGCCTCTTCTTCCAGTCCTCCTCATTAGGGACAACCACCACCACTTTCCGGGAGAAAGTCTTAAACAGTAACAGCTTCCGCCGTTGGCCAGAGTTGTACACATTACACTAGGGACAGGAGAAGTAATAGATGTTTTAGGAGTAAAAGTTAA-ATTCaaccaacacttactgagaatc----cttcacaagtgaggcactagattaagagg----------------------------actatt------------------------------------------------------------------------tata-----cagtctc--tgaattcttcaaaagctacatgatgttatcttgttttacccaacacgaaacttgagagtcagagagaccaa-gacttgtccaaggtc----acagacctagtaagt--ggtggagt-catgaatccaaagctagAACACTCGATCACCTCTATAGTGTGTTTTACAGCCTGGGTCCAAATGCTCTCTTGTAAAAACACTGAG-AAGTGTATCTCTCAATCCAAAAAAACATTACAACCATAATTCTTGGTTATAACTGGGTAACCTGATTCTGTTCCTTAATTTAGTCTTTATATATGCACCTTATTTTGACTCTGAACAATTTTATCAAATACCAAAATCAAATGGATACCAAATCTTTTATCTTTGGGAATATTGTTAAATTAGATTTCTTTTGAATTTCTGAACAATACCTGATCAAGAATGAAGTTCCTCTTTGTCCGGGAAGCAATCTGGACCAGCTTACTAAGGCACTGGGAGGCTTGCTGAACTAAAAGGTCTCGGCTTTTGGGATCCATCTCTGGCTCCTCGAGCCCCTTCATCTGATGAGTTTAAGAGGAAGAGAAACACAAGAAATTACAAAGTAAGTT--AAAGCCCAAG--------------------------------------------------------------------------AGTCACTGGTA------------------------------------------AACGCCACCAAT--GCCACCATATCGGTTCACTGCCATTCCTTAGAGCTGTGA---------------------------------------------------------------------------------------------ATGCTGTCCATTTCCTACAGGACTTATTTCCAGTCTCAATCTGGATATACCTGAAACACCCCAGGCTTTACCAGCTTTCAGAAATCTGATAACACAGCAAAGGAAAAGAAAAC---AAAAAACCAAAAAGTCATTTCTTTATTTGTGGGGCCCCTGATCTCAGACACCTGAAAGATTCAACTCC------ATTGGGAAAAGATTATATAAGTTTCTTGGTATTTAAA-AGCAAACACCAGAG-TGA----------TTTATCCCCTCCCACCAACTCACCCTCATTTGATTGAGCACAGTCTCAGCTCCCAGGACATTGTATCTTTTCTCAGGGTTTTCTTTTGCATATTTCAGTGCCCACTGGGTCTTTCCAGATGCAGGGAGTCCCACCATCAGAATCACCTGCAAGTAAACAGAACCAGGAATGCTATAAAAACAACCAACCAACCTGAGGGGAATGTTTACAAAGCCCAACTTCAGAACATCCT----------CCCCAGCTCCCAGTTGGGCAAAGCTTGAGCAGAAAAGTGACCAACC-----AAGCATGAGCACCAAGGTTCTGCACCCTCTCTGGCATACCTCACACTCCTCTATGGTCTTGGGAGGGACTGCAGTGCGCACGCGCTCCTCAACAGGCACGGCATGAATGAACACAAACTCTTCTGGTGGTGGGAAGAAGGGCTCCTCCTTCTGACCAAAATTTAATTCTACAACACAATTTTTGCAGAGGACATGGGGTAGAAGGGCCCGATCTGCTAGGGATTCCTTGCTGATACGGAATGCCACACCGAGGTCTTCTCCATTCTTGGAAAAGGAAAGTTCTACTTCTTCGGCCTCAAAATTCTACA---ACAAAAG-ACAAGAGCATTTATGGGCACACAGGCCTTGTAG a score=27236 s mm7.chr19_random 1490145 563 + 2598976 CTCAAATAACCAAGCAATGCATCAAATGTATAAAAGTCCATATTGATAGGAAGCATAGCAGAATCCTCTTAGCCTTTTATCTACCCTTTGCTACAAATTCACAATTTTCAGGAACACTCACAGCAAAACAGCCAATAACATCATTCTCCCCAAAAGTCTGGCCAAATTCCTCAAACTGCCCGTTTTCTGCCTTGAGTCCTCTTCCGTCAAAACCGTAGGAGAACTCGTCTTCACCTAGGAGAGTCAACGA--TCAATCATCTGCCTGCCATGTCTCCAGAGTAGGCGAGATGGTAACAAACACAAACAAG---AAGTTACAAAATCACCTTACCAAGCTGTGAACAGGAAAAATCAACAGACCACCCAACTCTAAGGAGAGAGACTTCTGTGCAGCCTTCTTTCATTGGGAGATTCTGAGTTACCTGGTCAAGTCAGAAAATGAA-TTCTTAGAT-CTATGACAAATGCAGGTACAAAGTCAAGAGTTAC-------AAATTCATATACAAATTGGAAAATAAAAAAATCTCAGCTCAATACTAGAAAAAGAACTTTTACTAAACCTAAATCAAAGT s bosTau2.chr29 32142136 557 + 45822729 CACAACTATGCAAGCAACGCATCAACTGCAGAAGAGACGCAGCTGATGGGAAGCA---AAGGATTTCCAGGGCCCTCCATCCACTCTTTGCTACAAACCCACAACTTTCAGGAGCACTTACAGCAAAGCATCCAATGACATCATTCTCCCCAAAAGTCTGGCCAAATTCCTCAAACTGCCCATTCTCTGCCTTGAGTCCTCGTCCATCAAAACCATAAGAGAATTCATCCTCACCTAGAAAAATCAGCAAATTAGTTTACCTACACTCAAACTTCCCACAG----------AGCAGCAAACACAAACATGATTAAGTTA-AAGGTAACTTTACCAAGCTGTGGATGCGAAAAATCAACAGACCATCCAACTCGAAGGAGAGAAACCTCTGTGCAGCCTTCTTTCATTGGGAGATTCTGGGTTACCTGGACAAGTCAGAAAAGGAACTTTTCAGATACTCTGACCAACTCAAG--CAAAGTC-TGAGTTATGAAAACAAAATTTTGATACAAACC---AAAAACAACTATCACAACTCAGCGTCAGAAAAACAACCGTCAATGAACGTAAACCAAAGT a score=421 s mm7.chr19_random 1490813 55 + 2598976 catggtggtgcatacctttaattccagcacttaggaggcagagccaggtggatct s bosTau2.chr29 32142693 41 + 45822729 CATGAGGG---------TTAATTC-----CTTGGTTACTAGAGCTAAGGTCATCT a score=63477 s mm7.chr19_random 1491024 1573 + 2598976 TTCAAGCAGGCTGACCTTTCTGCACTAATGAAATGGTGGGTAGGAGTCTAATACACAGTTTAAATTAATAAACGCTTTAA-GAATGACT-----------------------TACCTTGGCTTCAAAGCATACTTTTCCCTTTGTTACTCCATAAGTACTTCTTGCCCCAGACCAAAGGGTAGGGAACTTTTCTGAGAAGAGCGGCTGGCCTCCATATCGGTCTTTGCTTATTTGAAAATGGAGATCCGAGGTATCTGTTAAG-AAGATGCAACTGGCTTACTGCAACGCTCAACACCAAGA-----AGTGCTGAGCCA-----ACAAATACAAACACTGTCCAGGTACCCACACCACGACA-TTTTACTCTCAAAAGTCACTTTTAGATAGTCCAgaggctaataatgcaggaggatcacaaggtggaatccagcctgaaatacacaacaaagccctatctgaaaacacaaaGCAATCTTTATACATACACGTGTCCAGGTTCACAAGCGTCTGGTCCTCCTCTTCATCTTTTGCTTCTTCTTCTGGAGGTGGTGGGGACTTTGAGCTACAGGC-----AGGAAAGCAAATGCAACATAACCAAAGCTACCTTCTTT-GTCTGTGAGGTATTTGTGTGGCACTGTCCATTTTAAACTATTGGTGAATTACCAAGTTCCAGCAGACAGCTTCTTTCAGTCAATGAGAAAAGGG-AATACGAGTTTCCATCATAGATTTACTCTAAAACTTATGCCTATAAGGACCTAGTCCAGTTTTCAATCCACCCCTCCTTCC---ACACTGCAATCAACAATAGGAATACCAAAAGCAGAGCAGACACTCCCATC-----AAGGGAGTGTTTCCCTCACCGGCTGTGGTAAGCCTCCTCTCGGAATTCATAGTAAGCTCGGCCATGTTCATCCTTCTCATCCCGCTGTCTCTTTACCCCCCGCCGCTCACCATCTGAGCCTGCTGGTTTTGACTTTTCACTATCTTGGTCATCTCCTACAAAAGGGAGGGAAAGAAAATCAGTAGTTTTTATACTGGAGCGTACAATGAGCTCAGAACTAAGAGAATCTAAGTAAAATTTAGGAAACTGAGGGTATCTGATT--------GAGACAAAGTGTTCCTATTATATCC-----ATGTTTTATTTCCAA-----ATTTCAAAATCACTGATTAAGATGGGCGGGGGGTGGGGGTAGGTTGGGATGGAAACCACTATGGGCTTATT--------------------AAATTGGTCAATTTTCCCATTCTAAATTTATCTACTTCAATCAAGCCAACCTGGCACATCTCCCCACTGATATGACAGAAAAG---CATCCCTTAAGTCTTTTAAAAACCTTCACAGGTGAATTTCAATTCT----CATCAGATCTGGAGTTATGTCAAGTACTTAATGACTATTTTCTAGCACTTTTCAGCAGTTACTTGACACAGAAATCTCACAT--------------TTTCTTTAAGAGACTACCTTTTCTGCATTAAAATGCACAGTCTTACA-------------GTGGCAGGTGTATT-------TTTAACAGGAACT------------------TGAAAGTTACCAGAG-AAATTCTTAGGTCACAAGCAAACCATAAATAACACTGCATCTTTACTGCATGAAATTTGGGGCAGGAAGGTGGTGTTATATATTAAGTAACATTCTTT s bosTau2.chr29 32142734 1622 + 45822729 TTCAAGTATGGT-ACCTTTCTCTGATAAAATACTGGTGGCTGCAAGTCCAGTATAGAG--TAGTTTAATGACTAATTTAATAAATGAATGGTCCTAATGGTAGTGTACACACTACCTTGGCCTCAAAGCAGACTTTCCCCTTTGTCACTCCATAAGTACTTCTGGCCCCAGACCAAAGGGTGGGGAACTTCTCTGAGAAAAGTGGCTGTCCTCCATAGCGGTCTTTGCTGACTTGAAAATGGAGATCGGAGGTATCTGTTAAGAAAGAAGCAATCTTTTTACTCCAATG--GAACACAAAGGTACCCAGTTCTCAAGCATGGATACAAAATCTAAATCTCTTAAAAGCTGCAGGCCAGGAAGTTTTTAATCCCCAAAATCTCTTTTGATTGGT--------------------------------------------TAAAAACCCCAA------TCTGTCTG---------------CCTTATACATACACGTGTCCAGGTTCACAAGAGTGTGATCCTCTTCCTCGTCTTTCACCTCTTCTTCTGGGGGTGGTGGAGACTTTGAGCTACATGTATGAGAGAAAAGCAAATATAATGTAACCAAAG-----TCCTTTAATTCGAGAGGTGTCTGCATGACTTTAGGTCTGTTAAACTACCAGTGAATATACAA-TTCCAGCAGGCAGCTTCTTTCAGCAAATGAGAAAAGGGCAATGGAAGCATTCAGGGTAGATTCGATCAAAGACTTAGGCCTATAAGAACCTATTCCA-TTTTTAATCCACCCCCTTTCTCCAGACTCTCCAGTCAACCTCAGGTATACCAAAATTGGAGCAGAGACTGCCTTCAATGAAAGGGACTGTTTCCCTCACCGGCTGTGGTAGGCCTCCTCTCGGAATTCATAGTAAGCTCGGCCATGTTCATCCTTCTCATCCCGCTGTCTCTTTACCCCCCGCCGCTCACCATCTGAGCCTGCTGGTTTTGACTTTTCACTATCTTGGTCATCTCCTACAAAAATGAGGGAAAGAAAATCAGCAGTTTTCATACTGGAGTGTAGAATAAGCTCAGAACCAACAGAAACTAA---------AGGAGGACTGGCATATCTGTCTAATCAGAAGAGCCAGGTTATCCCCACTGCATCCACAGAATGTTTTATTTCCAAAGATTATTTTTCTGTCATTG-----GATGGat------tattttttttttaaaaaaaaGGACATTATGGGCTAATTTCAGTCAAGAAGTATACTGAAAGTTAGCCAATTTTTGCATTCTAAATTTATCTGCTTAAATCAGGTCAAACTTGCAGATTTTCCCACTTACATGACATAAAAGAAACATGCCATAAGT-TTTTAAAAAACTTCATTGCTTAACTTTGATTCTTGACTATCAGATTTGGATTTAAGCTAGAGACTTAATATATATTTTTCAACACTTTCC--CAGTGTTGTGGTACAGAAGCCTCATTTTGTTTCTTTCTTTCTTTTTTGAAGAGTTTGACTTTCCAGCTTTAAAATGCACAGCCATACACAGCTTTACTTACATAGCAAATGAACTCTGGCACTTTATACAGAGCTCTTACCATAGATTTTTACTGAAACTTGCAAGAACAAACCATTAAGTCACAAGAGAGCCATAAATAATACTGCATCTTTACCTCACATAATTTGGGGCAGAAAGGTGTTGTCATATATTTAGTAACATTCTTT a score=127189 s mm7.chr19_random 1492769 3618 + 2598976 ATGGAATTTTTCCTTAGGCTTTCATGTTTTG-------AAGGCTTAAG---TGTTTTCAACAATTCCTTTAAAACACTCCCTTATTCTTTAATGCTTTTGATCTGCTATTTGGGATAACAC---AAATTAAGGGTTATGTAATAGGACCTCAGTCCCAGGACATCGGACACAACAAAAACCCCGAACACTATACTTTGCATACAATCATTGTAAAATAGATTCCAATTTTATAACACTAAGATCCAGAACAAAAACCAAGAAACAACGAAACAGTACAAAAAACTCTAAGGCAAAAAAACCTACTTGGAAGTAAAACTTAGAAGCAGCTCT----------CCCTCCTGACAG-TCACTATAGGTTAGCTCTAACCATGCAAGCATTTCAAAAGGA-----GAAAGTCGTTAACTCCTGGGGGAAGTTTCCACAAA---CCTACCACAAGGTTACT--------CCACTAGAACCCCTAAATCATTTCAGCTCAGTTAGTTAGGAGCCTTAAGGGCA----------CCAGTGTAGAATAAGTCTATAAATATGCTTATTTACAGC--CTGGACAGGAGACTTAAAATATAAACACAACAGGGACAAAGTAAAAAGCCCCAGTCAAGTAA------CTAAC--ATTCTACTAAAATGTTACTAGACTAAG--TTTCTCTTTGCTAGTTAATGATTAAACCCAAAAGGCTCACAC---------------ACTGTCTCCGACGGCTTAAGCAGGAAGGAGCAAGGTTAAATATCCAGAGTCTCTTTGAAG----------ACTAACTTGGGTTTGACAGAGC-AGCATTTCACGGACT--GTTTTTTGCTTAACATTTTTAAGGT-AAGGAACGAACTGTC-----------AGGCCTTAGCTTCCAAC---TGGTCT-------CGGGAGAGCGCCAATTTTTCAGCATATTTGCGGCTAAAGGTATTCTGCTAAAGAGGGGTGGGCAC--CAGAAGACTGATCC-ACAGGTAGCTCGAAAGCcacacacacacacacacacacacacacacacacTTCCATCCACTAACACCAAGG----AACCACGTTAGGCAGGAACCTCCCTCCTGCAAACAGTGTAAAGACAAGACGCCCAAA---CCTTCAAAAAGATGGACAGCGGATGAAAGCCACCTTCCCAGGAGAATCTCATCAAAAAGCCACTAGAACAGTGCACTTTCGGGCAAGTGGAAACAAGGAATCAGATAGCGCGGTGCAGGGTGGGGTGCTGGATCGGAGACGCACCCGGCAGGTTGAAGCCCGGCTTGGCTGCCAGTTCCTCACCTTGTTCCTCTACGGCCTTGTCACCCGGTGCCTCGGATCCCGGAGTCTCGTCTCCGCTCCGTTCCTCCGGCCCGTCTTCCTCCCCCTTGCCGTTGTCATGCTCTTCGCCACCATTTACCCCACCTGACCCAGCCGTGG---CCTCCGCCGGTGTGTCGGAAGCTTCGGA------CTCGGCCTCCATGGCTGACGTCTCCGGGGGCTCCGGAGGCGGCTGCGCGGCCTGGCCCAAAGCCTGAGCAGGTGGTGGTTCCTCGTCTTCGTCCTC-AAGCAGCGcctcctcgtcctcctcctcgtcgtcgtcctcctcctcctcgtccCCGCCCGGGCCTCCGCCCGACGCGGCCACAGGCCGAGGCTCCGCCTTGCAGG-CCCCACCGGGCCCGGCCCCACCAACGCCGGC-CTCGTCCTCCAGCATCTCAGCATCCAGTGCCTCCTGAAGACGCTGCGCCAGATCCATTTTGAGGCCGCGCGAATCCAGGCCCCGCCGCTGAAGCTCCGACCGCAGCTCGGTCACTTTCAGCCGCTTcacctccatcgccgccgtcgcctcctccgcctcccgccgcctcctcccctgcgaactgtcgaccgagcccgaccgcgcaggcgccgccgccgcccgcctccgcctcccgcgccAGCACTGAGCCCGCGCTAGCAAGCGCACGCA------CACAGAGGCAG--AGGC-----------------CGCGCTGTCTTCGCGGC---GTGTTTATGTCGCCTTCCTCCTGCCCTGCCCCTTTCGGCTCACTGAGCGCAAAACAAGACGGCGAGGAGCAGCTTCCGACACACTCTGTACTCGACC---------------------------GCGGGGGAGTGCGCGCCGAGGACGACGGAGTTCCCTCACTTCCCCTCCCTCCTCTCAGAGATCC-GGGCCAATCAGCGCAAGCGGCCTAACCGCGCAGCCGCACAGGGGCCTGAGTC-GGGCAAGGCTGGCTGCGGCTCAAGTGCCTCGTAGCACGGAAGCGTGAGCGCGCTCCTCTTTCCGTACTT-CAGTCGTAGGCTCTGCGCAGTCGCGCCGGAGTCCCGCCCATCTCAGGTCTCTTACT---TCCTGCCCGCTCCCAATTACCG-------------------------GAGCACCCTAGGGCTTACTCGATGTCCTCTCTTGCTTA--------------TTCTTTGACTGTAACTTCTGAGACTAGTAACC----------------GAAGCCAAGCTGGAAGGATGG-------------GTGG-----TGCAGG-----GTTTTCGTAGCCAG-GAGGGAAAGGCCTTTCCAGCATCAAGGGAGAGAGAGAGAGGGAGAGAGCAATGCCGGGACCTCTT------TCTGTGCTTAAACATCTACCCAGCAACAGAGGCGCCAACCCCACCCCTTCCTTCTCTCGTTGGCCAGCTTGAATCGTAGTCTGTTGCTCTGATTGGTCCTCCGATATCGTGCGGCTTT----------------TTTTCCTATTGGAGAAGTGGCCGGGAATTTTTTTTTT------CCGGGTTGGTCCGCTGGG---------GAGGCGGGGCCGGTTCTGCGGGATTACTTTTCTAGACTCCTTTCTGATTGGGTGGCATGACGCAATGCGCGTGCCCCGTTAGAGGCTAAACTGCTGGCAGGTCTGGTCTCTTCCTCTCTGTGCTCCTGCAACTTAAACCGAATTCCTG-GAGGAGTCTTCCGGCTTGGGCCTCCGCTGTGGTGCG-----------GTTGTTGGGCACAATGCTTCCGGC------------CTCTTGTGCCTC-----ACTTGTGGACTGGAGACTCAGGCCTCACTCACTTCGGTTCCTCAATTAACAGCAGAACCATCAACAAATGTTTGTTGGATAAGGACAAATAAAGAGATTGGAAAGGAGCGAAGCCTTTTTGACTTGTTT---CACTTGTTCCCGCCTACTCCA-TCTTCTTCCAGGTCAGGG-GGTGTGCCTCAGAGAAAGAAGGAAACGAATTTTGCGGGCGGTCACACACTTGGAACG----TTTAGTCGGGCCTTTGGATTTCCCTAGTGTCTGTAATCACGCCGGGATCTCTTCTAATGGAACTCATTTGGTCAATGGCCTCACTATCCTCACATCATTCCTTTTTTTAGTTTGCGGTACTTCTGGAAACTGAAAACTA---GCACAGGAGAATAGATGGGAC--TAGTAAAAACAGCAAAACCCACATCCCTGCGAG--------------------CTTCTTGC-TTACGAAATC-GATGCTCTAATCATTTATTTTGATCCCATT-CTACTGCTTCAGTTTCTCTTTCATTTAACAGTTCC-----------------AACAGTCATGGAGAAGCGCCTTCAGGAGGCTCAGGTATACAAGGAGGAAGGAAACCAGCGCTACCGGGAAGGAAAGTACCGAGATGCTGTGAGTAGGTACCATCGAGCTCTTCTTCAGCTGCGGGGTCTGGACCCAAGTCTGCCTTCCCCTCTTTCTAGTCTGGGACCTCAGGGCCCAGCTCTCACACCGGAGCAAGAAAACATACTGCACACCATCCAGACCCACTGCTACAACAACCTAGCTGGTAAGTATGGGACGAGCGT--GGGCAGAGAATCAAGACCG s bosTau2.chr29 32144376 3861 + 45822729 ACAGAATTTTTCCTTGGACTTCTGTGGTTTGCAACACTAACACTAAAGGTTTTTTTGTAATAACCTCTCTAAAGAAGTTCTTTATCTCTCGAGCTTTTTTACCTGCTCTTTGGGGGTACACATTAAGATAAAGATTATGTAATGGGATTTTTGTTCCAGGACATAGTAC----------------AAGCTGCAAGTTGCATGCGACTGTTGTAGAATGGGTTCCAACT-----ATACCATCATACCCAGCAGCAGCCTAAAAAC-----TGCATTATAAAAGGAACTAA---AAAGCAAGCCACTTCATAGTAAGAATGGGAAGCAGCTCTAGTTTTCCTCCCACTCTGACAGATAGTTATGGATCAGCTGTAATCATCCAATCACTTCAAAGGAAGTGAGGAAGGTCACTAACTCCCTGGGGCA-CCTCTATACATTCTCTTCCACAAGGTTATTCAATGGACCCACCAACACCCC--AATCATTTCAATTCAGGAAATCAGGGACCCAAAATGTAAAAGGCTAGCTAAGTGTATAGTAAACATACAAATTTGCCCTTCGATATCCACTCAAATGAAAGATTAAATTTTAATCATAATTCAGGCAAGGTAAAAC-CCCTAGCCAAGTAACGTTAGCTAACTTATTCT----AAATGTT-CTAGATTAAGATGTTCTCTTTCGTAGTTAACCATTAAACTCGACACCCTCACACTGCAAGCTACTTGAAGCAAGCTACTGCTGCAAAAGCAGGAA----CAAGGTTAGATTTCCAGATTTTCGGCGTAGCTCAAACTCTAGTAATGAGCTTTTGATGGGGCGAACTCTTGACGAACTTAGCTTATTGCTTAA---TTTTATGGCGAAAAAGTAAACAGTCCGGTGGCCCAAAGGCCGAAGCCTCCAACAGTCGGTCTGGCTGTCCATGTAATCAACAATTCCTCAGCACATTCCCGGTTTAGG----------AAAAGATAACCAGCACCGCGGGAGGCTGCTCCAACAGGTAGCTCGTAAGCAGTTCGCATGGGAAACCGC---------TTTATTTCCATTCACTACCACCAAGTAAGCAATCAAGTTAGGAAGGAACCTCCCTCCTGCAAAGAGTGGGGCCACCAGAGGTAGAGAAACCCTCCGGAAAGGAGGAGAGAGGACGAAAACCACCTCCCCTGGGGAGTCCC-------------------------------GGCAAACGGCGATGGGAATCTGGACCCCGCGGTGCAGGGCTCGGTGCTGGGTCAGGGGCGCACCCGGCAGGTTGGAGCCCGGCTCCGCTGCCAGCTCCTCACCCTGTTCCTCTGCGGCCTTGTCACCCGGCGCCTCGGATCCCGGCGTCTCGTCCCCGCTCCGCTCCTCCGGTTCATCTTCCTCCCCCTTGCCGGTGCCCTGCTCTTCGCCACCGTTTACCCCACCTGACTCGGCTGTGGCCTCCTCCGCCGCTTTCTCGGAAGCATCGGGCTCCGCCTCGGCCTCCACGGCTGCCGCCTCTGGGGGCTCCGGCGGCGGCTGCGCGGCCTGGCCCGAGGCCTGGGCAGGGGGTGGCTCTTCGTCCTCGTCCTCAAAGCAGCGActcctcgtcctcctcctcctcctcttcgtcctcctcctcgtccCCACCCGGGCCACCGCCCGACGCGGCCACAGGCCGAGGCTCCGCCTTGCAAgcccccgccgggcccggccccgccaccgccggcACTAGTCCTCGAGCATCTCAGCGTCCAGCGCCTCCTGCAGCCGCTGCGCCAGATCCACTTTGAGGCCGCGCGAGTCCAAGCCGCGCCGCTGCAGCTCCGACCGCAGCTCGGTCACTTTCAGCCGCTTCACCTCCATCGCCGC---CGCCTCCTCCGCCTCCCGCCACCTCCTCCCCTGCGAACCGTCGACCGAGCCCGACTGCGCAGGCG----------CCGCCTCCGCCTCACGCGCCAGCACGGAGCCCGCGAGAGCGAGCgcacgcacgcacgcacgcaggcaggcaggctggcaggcggcgggcagCGCGCAGCCTCCGCTACGTAGTGTTTATTTATCGCTCTTCCT-CCCTCCCCCTTTCGGCCCCCGGAGCCCAAAACAACGCAGCGGGAAGCTGCTTC-------CTCTCCAGCCGACCATCGGCTTCTCTGCCgcgggcgggcgggcgggcgggcgcgcgCCCAGGACGACGGACTTCCCTCCGTTTACCTCCCGCCCCTCTCACCCCCTGGGCCAATCGCCGCCGGCGGCTTCACGGCGCAGCCGCACCGGAGCCGGAGTCGGGGAAAGGCTGGCTTCGGCCCAAGTGCCTCGTCGCAACGAGGCGTGTGCGTACCCCACTCTCCGTACTTCCAGCCGGGG---CTGCGCAGCCGCCTGGCGCTCCTTCGCCACACGCGCCTCCCACTCCGTCACCCCCCCCCCCCACCACCGCCAGTCCCGTCTGATCCGATCGTGCTGTCGTCTTAGGGCTTGTTAGCTAGTCTCTGTCCCTTAGTTTATTTATTTATTTTTTTGTCCTTTAGTTT--ATACATGCAGCCACTTCTTGAGGGGAAAAAAGCCAGAAAGGAAGAAAGGAGAATCTTGAAACGTGAACTCCTGCTGGCAATTGTCTTTCTGGTTAGTTAACAAAAGGACTTTACAAACCCAAGAAATACAGTTAAC--------------CCAAGCCCTCCTGTTTCCTCAAGCCTTCAACTTCTACCCAGCAACACACACTCTGACCTCGC-----------CTTGTTGGCCAGCTTGAATCGTCATCTGCAATTCTGATTGGTCTTCTATGATCTTGCAgttttgttttgttttgttttgttttTCAATTGGCGAAGCAGCCAGGGGTATTCCCCTCTCCCCACTGGGTTGGTCCGCAGGGGAGGCTAGAGAGGCGGGGTCGTGTCTGTGGGATTCCTTTTCCCGGGCCGCTTCTGATTGGGC-GCGTGGTGCAATGCGCGCGACCCTTCAGACATCAAACTCTCGGGAGGCTGGACCCTGCCCTCTCCGTGCTCCCGCCTTGTAAAGCGAAGTGCGGCGAAGAGACTACGGGTTTGGCCTGTTGCAGGGGGGCGGGGAGCTGGCCGCTGGTGGTAAGGGGGCTTGCAGCTGGGCGGCGCTACGGCTGTACCACCATCGGCCTGTGGTTGGGGTGCACGGACTGCGTTCACCTCGGTTCTCCAACTCCCGGCCCAGAAGTCAACGAATG-CTGTTGAGTAAGGGCAAACAAAGAG-CTGGTATGGAGGCAAGCCCCCTAAACCCTTTTTAGCAGTTATTCCCGCCTACTCCCTTCCGCTTCCGAGTCAGGGAGGTGTGTCCGAACGAAAGGAGGAAACAAGAGCCGCCGGCGTTCAGACGCGGGCCACGATTCTTTAGTTACTGCGTTATAGTTTTCGTGTTTTTTT-CTCACCCGGGAGTCGCCGCTTTGGGAAATCAATTAATCTCAGGCTTTGCTGTTCCCACATCTACTTCCTGATCAGATGCTTGCACTTCGAGAGATTAAAAAGTAACTGTAGAGAAGAAAGGAAGGGGCTGTAGTAGAATCA--AGCAGTCAT-TCCCTGAGAGGCCTCCTGGAGAAGGAGAATTTCCTTGCTTTTTTAAGTCAGCTGCCAAAATTCGTTGCTTCGCTCCTATTCCTAGAGCTTCGGTTGTTCTTTCACGTCCCAATTCCTCAAGAGCACTGGGCGACAGAGTTATGGAGAAACGCCTGCAGGAGGCTCAGCTGTACAAGGAGAAAGGAAACCAGTGTTACCGGGAAGGGAAGTACCGGGATGCTGTAAGTGGGTACCATCGAGCTCTGCTGCAGCTGCGGGGTCTGGATCCAAGTCTGCCCTCCCCGATACCTAATCTGGGACCTCAGGGCCCGGCCCTCACACCTGAACAAGAAAACCTACTTCACACCACCCAGACAGATTGCTACAACAACCTGGCTGGTAAGAACAGGGCCGACGGGAGGGTACAGTGTCAAGGCCG a score=16354 s mm7.chr19_random 1498673 301 + 2598976 CCATGAGCTGAGCAGTGGAATCTCTCTCGTGTATAATAAGCCCTCCTCCTTTTTCCCTTTAACTTGGC-CCATTAGCCTGTCTCCTCCAGATGGAGCCAGTGAACTATGAACGAGTGAGGGAATACAGTCAGAAAGTCCTAGAACGACAACCCGATAATGCCAAGGCCTTGTATCGGGCTGGAGTAGCCTTCTTCCACCTGCAAGACTATGACCGGGCTCGACACCACCTGCTTGCTGCTGTCAATAGGCAACCTAAAGGTAAGTGAGagatgagcatatataaaattgtcagtacaaagaa s bosTau2.chr29 32153258 289 + 45822729 CCTTGCGTTGGGCGATGGGGCATC------GTGTAACAAGGTCCTCTTCTCTCTTCCTTCCGTTTGCTGCCATTAGCCTGTCTCCTTCAGATGGAACCAGTAAACTATGAACGGGTGAAAGAATACAGCCAGAAAGTCCTGGAGCGGCAGCCTGATAATGCCAAGGCCTTGTATCGGGCTGGAGTGGCCTTTTTCCACCTGCAGGACTATGACCAGGCCCGGCACTACCTCATGGCTGCTGTCAATAGGAAGCCAAAAGGTGA--GAGAAGGGGGC-----TGAAGTGGGAAGTACAAAAAA a score=6156 s mm7.chr19_random 1501579 250 + 2598976 TGGATCCCTGTAAATGAACTTGATCATCGCTGTT-CAGCCTACTCTCCAGACAGGAGCTGGCCTTTTGCTCTACGTAGTATTTTATCATTGAGCTCAGGTAACTCCAGGTGTGACCTAGAAAAACAAGCTACTGACTGGGAGAATTTCAGATCTGGCACTCAGTTTTCAATACAGAAGGGACACTG--AAGCAGATGGCAGGTTCATTTCTATATCATTTCTGTATTGTTGGTTTAACACTGAATATGGTGTC s bosTau2.chr29 32153744 226 + 45822729 TAGATTCCAGTGAATAAACTTGATAATCCTTGTTTCTACCAGTTTTCCAGCTGAGGTCTGGC-TTTTGCATGAC-CGTCCTTTCATCCTTTAGCTCAGCTAACCCCAGGTATGACCTAGAAGAACAGGC-----ATCCTGAGAACTTGAGGCTTG---------TTTCCAAGCAAAAAGGATATCGTTAAGAGAATGATAAAC-----------TTGTTCCTGTGTTGGTGGTTCAGCTCTGAAAATTGTCTC a score=18510 s mm7.chr19_random 1502803 545 + 2598976 ataaataaTAGAATTTACTATTATATGGAATAGTTGTGATACATTCAGAGTTTGGAGAACT---AAAATAACTAGGAGTGTTAACAATGCTCTGTGGTCCATTTGTGTCATTATGG-TCTGTCTGTAA--ACCTCTATTGTC---TTTGAAGATGCCAATGTTCGGCGGTACCTCCAGTTGACGCAGTCAGAACTCAGCAGCTACCATAGGAAGGAGAAACAGCTGTACCTGGGCATGTTTGGTTAATGAAGAAAAGAGACATTTCTCAACTTGAACTCAAGTGGACAAGCAAAGGCCCATT---GGGGAATCTGAGCCTCACTCAGCAAAAGGAGTTCACCCTTTACCTCTGACCCAGGTGGATTTCCATTTTGTTTCCTGTTCTGCACAAGTTCTTTGCTC-CTTAGACCATCTGCATCGTTTATTGTCTGTCCCCTAGTGTATTTGTATGGCT--------------------------------------------TACAATCTGAGAACATTCATCGACTGTGGGTGGAATCAACTGTATTTGTGGCATAGA-TTTAATG--GGGTGTTATTAAATGTTCTCAGACACAGAGGAGAGGGC s bosTau2.chr29 32154587 592 + 45822729 ATTAATGAAGGAAATGTACGTTGCATAGAATAGTTGTGATATACGCAGATCTTAGAAATTTTCAGAAATGG--AAGGGTGTTCACAGTCCTCTCCTGCCTGGACGCACAATTACGGGTCTGTCTCTGATTGCCTCCTTTGTCCTGTTCTAAGACGCCAACGTCCGGAGGTACCTTCAGCGGACACAGTTGGAACTCAGCAGCTACCATCGGAAAGAGAAGCAGCTCTACCTGGGCATGTTTGGTTAA--AAGAAGAAAGATACTCCTCCACTTGAACTTAGATGAACCATTAGAGACCCATCAAAGGGAAACCTGAGC----CTCAGCAAGAGAAATTACCCCCACACCTCTGACTGAGGTGAACTTCTGTTTTGCTTCTAGTGCTGCACAAACTCTTCTATCACTTACATAGGCTGTG----TTTTTGTTTCCCCATCTTTCTATTTATATGGTTTTTAATATATGGTATTATATATCAGAAACATTTGCCTTGAGAAATACAACCAGAAAACACTCATCAGTTATAGGTGG-ATTAATCATAGCTCTGGCATAGATTTTGATGATAGATGTTGGTAGATGTAGTCATATACAACGGATAAGGC a score=2187 s mm7.chr19_random 1503348 59 + 2598976 CGGTGAAGGGTGAGAGAGTAAGGACAGGCAAACAGGAATCTT---CTGTAGTATCTTCAGAT s bosTau2.chr3 49593691 62 + 85360813 TAGCAGAAGATGAAGTAATAAGGACAGGCAGAAAGGAATGTTTTCCCTTCGTTTCCTCAGAT a score=46 s mm7.chr19_random 1503407 4 + 2598976 GCTT s bosTau2.scaffold3581 40420 4 - 79351 TCCT a score=212 s mm7.chr19_random 1503905 114 + 2598976 tggagtctaaaccatgacaatcacaaattcaaggtcagtcagatct---tgtctcagaaTTAAAGGGCTGGAGATAACAGCTCTGTGGGAAAACCCTGGGTTTAATTCCCCTTTCT----------------------------------------G s bosTau2.scaffold3581 40470 136 - 79351 TGTACTGTAAAACTCAACAATTATAAATT-----------AGACCTACATGCCTCAAAACGAAAGATTTGAAAGTAACTATCTTGATTAAAA----------TAATTCCTTTTTCTTAATGTTCCACATACATTGAGATTCTTTATCCTCCACAAAA a score=4406 s mm7.chr19_random 1504019 180 + 2598976 GTTTTTGGTTTGCTTTGTTCCCTCCTGGTAATTTCTAGT--------CCTTGCTATTGCTTGCACTCAGATCACTGACAAAGTACAA-CTTATTTGTCATTAATTTAGTCTTT---TTTTAAAACTTCTGGAGTGAATGCCTGGGATACATGAAACCCTGTTTTTACCTTCTCTCTGACCTTGTGCCAAGAA s bosTau2.chr3 49593933 185 + 85360813 GTATCTAGTTCCTCTTGTTTC-TCTTGATAATTTCTAACTATTGTAGCCTTGCTATTGCTCACACTCAGATCATTAATGTAGTATACtttttttttttttttattaaaCCCTTCTGTCTTAAAACCCCTGGAGTCAAGCATCTAAGTATATA------TTTTATAACCTTTCAAAAGACCTCATGCCAGAAA a score=9076 s mm7.chr19_random 1504652 539 + 2598976 ACCTGTTTCCTCTTCAGCTGTCACTCTGT--CTTGTAGGTGCTCAGGACCTTACAGAGGAAAGAAAGTACAAGGAAAGATGTTTATTGTTTAGTGTGTTGGAAGCACCTGATAGAATCCTGAAGAAGCTGTGTCACTCATGGGTGCAAACCTAGGGTTGTCTTGCCTTGCCTTGCCTCGGTGGCA---TTCAGCTACTGGTGGCTGGTCTGTCATTCTGT----TTACCCTGG-ATCCTCTTTATGTCATGGCTGACAATTAGTAGCTAAGACCATGTAGTAG----GCCTCCACCTTTATAAGCAGAGATAATAAGCATGTGTCGCTAGCCATTATATAA-------TCAAAAACCAAATATGTTTCTTGGG--------------GTGGGACCAACTAGCTT-ATTAATAATACCTAAAACTCTCCTAAT--ACTCTGTGCTTCTATGTTCCTCCCCATAAT-TTAAATAATATATCCAACAA-----GATAAAAAGCTTTTCTACCAAAC--CTAAAAAAATACAAGGACAGAACT-----AAGTAGAATATTTTA----TCTTGCAGACTTCTTAAACTGCTAAAGTtag s bosTau2.chr3 49594237 574 + 85360813 ATCTGTTT----TTTACCTGTCACCTTGTATTTTGTAAGAACTCCATTCCTTAAAGAGGAGGGAAACAGTGAGGAAAGGTTCTCTTTCCTTTGTGCCTTTTAAGCACC-GACAGAACTTTCTGGAAGCTTTGTTGGGCACAGGTGCAGGCTGCAGAT---CTGGTACAGCCATGGCTCCGTAGGAGGCTTCCTCAACCGG-AGCACCTTTATCATTCTGCACACTTATTCTAATGTCCACAATGTGTGA--GTTGTACAAGAGTAGATGAGGCCAT--AATAGCTCTGCCTCTATATTTATGAATGAAAGGAATAAGGACATGTCATTAGCCATCATATAAACACAGTTTACAGACAAAA---ACTTCTTGGTCTTGCCAAGTGTACATGAGCTCTTCTCTCTTAATCAGTAATGTGT----CTCTCTTGATGAACTAGGCTCCTCTTTGTATCTCCCTGTACTCTTAAATAGTACAACCATCAGCttataacaaaaagtctttataccaaatagtctttTAAGTCCAAGGACACAGCTAACAAAAGAGGAATATTTTATTCCTCTTCCAAGCTTCTTAAATTTCTAAGCCTAG a score=9683 s mm7.chr19_random 1505592 416 + 2598976 TGTCATC-TTGCATGTTTCACTTCTTCAGAGCTGGTTTTGCTTCCTGGCTGTTGTGTA--------AAAATTTGATGTTAAAGGAAGCTGTCTATTACATCAATGAGGAAAAA-TAAAACTGATATTCACAAATGCATCTTAGAAATTTATTTCACTGATA-------------ATTTCTCAGCCTTCCTAGCAG-------TGTCAGACTTAT--------------TCTGTAGCTCAGCGCCCAACAGACTCAGTAAGTCACAGAAAAAT----AAAACCAAGC---CTGACCTAGGGCTTGAAGAGGTCTGATGAGCCCACATTGTGAATCAGCCTCAGAGGATCCCTAAATATAAGT--TCAGTAGTCTGTGGAGGGGACAGGCTCCAGCTTTACCAGGCTTTAAGCATTTCCA-ACAAGATTTGAAGGTTCTAAGTGAAGAGGTAGTCTTTGTGGTGCATGTGAA s bosTau2.chr29 32155622 462 + 45822729 TGTCATGGTTGTGTGTTATCTTTGTTTGGGGCTGGTTTTGCTTTCTGATTTTCTCTTTTCCCCACTAAGACTTGATGTTATAGTAAGCTATGTTCTGTATCAATGAGGAAAAAATAAAGCTGATATTTAAAAATGTATTGTAGATGTATATTGCACTAATCTTTTTTTTTTTTTCTTTTTTTGCATTACTAAGAGACAAAGTGGTCAGACTTACATTTTGGTCTTTAATTTGAAGGCCAGC-TCTAACAAAGATGCTAATGAATGGGAAAGTGGACAAAGGTAGGCAGTCAGATATGGGTCCGGAGGAGGCCTGCCCAGCCCACATCCTGAAGGAATC-----AGGTAGCTAAATCTGTGTACTCAGAAGTTTGTGGAGGGGGAAGCAGTACACCTTACCAGTCCTTAAGGGTTTCCACACAGGATTTGAGGGTT-TGATTTTAGAGAAAGCATTCATGGTG-ATGTGAA a score=7611 s mm7.chr19_random 1507033 148 + 2598976 GGCAGCTGATTCTTATAGGCATATTGA-----TATTTACTGTAGAAAAGACT--GAAAAGGGTACTCTACTTGCTTAGAATAGCTTTTACT------ATTTATATTTTGCCCTGTCTTGG-GAGGAATTAAGGCAGTAATACATTTGCATAAATAAAATTGG s bosTau2.chr29 32157625 162 + 45822729 GGCAACTGATTCTTATAGGCAGTTTGACGTGATAGTTACTCTAGGAAAGACTTTGGAAAAGGTGCTCCACTCAGCTAAAATAGCTCTTACTGGGTTTATGTACATCTTGCCTTGTTTCACCAAGGAGTTAAGGCAGTAATGTATTTGCATAAATAAAATTAG a score=4551 s mm7.chr19_random 1507646 309 + 2598976 TAGGGAGCTTTCTTTGGCCAAACCGTTGCTGTTCAGCTCAGTCTCCT-CCTATCTCAAAACAGCAGTAGCTCA-------------GCAGTTCTGAGTGT----------------------------GAAAGCTTGTTGTAGTTTGACCTTTTTCAGTTTCCCTTCCTGTTTGATTTGCATTTAGGTCCTTGTGTGC--AGGAGAGGATGTCTGTAGGG----CACTGGCTACTCTTGT---TACAGCTTTACCTTCACAAACTGCAAA-GCTGCTCC---ATTTACACTGAGCTGTTTCCCCTCATCCCATCTCAACACTTCACAGACTCTAGGCTTTGGTTTTTCTCACTCTGTTGCCAAT s bosTau2.chr29 32157899 350 + 45822729 TAAGGAACTTTCTTTGACCAAATATTTGCT---CAGCTCTGTCTCCTTCCTATGACTCAAAAACAGTAGCCTACTAGTAAGAGTTCACAGTGCTGAATGTAATAAATCCAAAAAGAGAAGAAATTCAGGAAATTCACTCATATTTTCATCT----AAATATTCCTTCCTGCTTTTTTTGCACTCAGTTCCTTATGTGTCAAAGAGAAAGGGTTTGTGGGGAGCCCTCTGGTCCATCGTACAAATACCACTCTACCACAGGCAGGGGCAGACCCTTCTCCTGGATTTCTAGAATGCTTTATCCTC-CATGCCACATCAACACCCCAAGTTCCCATTTCTTTG------CTATCTCTATtgccagt a score=6229 s mm7.chr19_random 1508572 221 + 2598976 aTCTCTCCCCACAGGGTATATTGTTTTCTCTCGTT----------TCTTCAGAGACCTCAATTCAAAT-TCACAAATAGGCAAAAATTTCTAGTTATCAATACATGACACTTTGTTGACAACAGTGTCTGTCGTCATAATAGCCAACCAAAGACCTTTCTAGGTACAAAGCAGAGGTGACAAGGTAAGAGAACAAAACCATTCACTCAAAAGAATTAGAAAACTACTTCTAG s bosTau2.chr29 32158415 202 + 45822729 ACCTACCACCACAG----TAGTGTTTCCTGCCTTCCAGTTTGTCGTCTTCAGAGACCTCAATCCACATATAAGACGCAGGCAAAAATTTCAAGTCATTAATACA-------------------GTATTTGTCATTGAAACAGTCAACCAAG--TCTTTCTACATGGAAAGCAGACAGAAAGGGGTAAGGCAACAAAACCCAACACTCAAAA-----AAGAAACAGCTTCTAG a score=21952 s mm7.chr19_random 1509770 498 + 2598976 CTCTTTGTACTTTAAGTCTATGCCACCCTCTCCCTGTCTCACTTTTTGCCTCATGAGCAATTAGACTCACATGCTTACCC--AATACAGGTGTCAGAT----AAAAGAACTAGAGGGCAGACATGAA----------GTCATGTAGACATGTGGAAGAAACCAGCCAACACCAGTTCAAAGGGATAATTTCAGTGCTAGTTTTATGTTCCAGAATGTGGAATGA---GCAGTTACACCTCAGGAAAATTCTCAGTGCCCTTGGAGAACTGGCTGACTTGCTCTGCCCTATAACATCCTGTTTATCTGGCTGGGCAAAGAAAAGGGTAGACAGCTTCGGGTTGGGAAGAACCTTCATTCTGCCACC--CTGGAGTGATGAGGTGCTTCCAGCCTTCTCTGTAGCCATCTAGCAATGGTAAGAGCAGGCCTGGCATCAGTTCATGCTC-CCCAGATGTTAATTTTTAGGACCAAGTGCAAATTCTTTGGGTGGACCTCCACCACCACTGCTATGTCTCTCTG s bosTau2.chr29 32159178 505 + 45822729 CTTTTCCTAAGTAAAGTCTACATTACCCTCTACTTATCTCACTTTTTTCCTCCTAAGCAACCTGACCC------CTACCCCAAATGCAGGTGTCAGATTCCTAAAAAGCCTGGAGAAAAGCTATGAAAAAATCAGGAGGCATGCAGGTTTGTGGAAGAAACCAGCCAAC--CAGTTCAGAGAAATACTTTCACTGCCAGTTTTATGGTCCAAAATGCAGAGTGAAGAGCGATTACATCTCAGGAAAATTCCCAGGGCG-GCGAGGAGTTGGCTGAGATGCAATACCC-ATAAAGTCCT----CTCTGGCTGGGAAAAGAAAAGGGTAGGAACCTTCAGCCTGGGCAGAATCTTCATTCAGTCCCCAGCAGAGGAAATCAGGTGCTTCCA-CCTTCCGTGCTGCCCCCTGGTGGCAGCAAGAGCAGGCCTGGCATCGGCTCATGCTCTCCCGGATGTTAGTTTTTGGAGCCAAGTACAAAATCTTTGGGTGGCCCTCCAACACTGCTGTTCTGTCTGTCTG a score=138133 s mm7.chr19_random 1510268 2505 + 2598976 TCGTTTGGGAGCCAGAGAGGGGCTGCACCCCTAGAATGGTGCTAGCCTCTGGATCTGGTTTGCTGCGTTTGGCCAGGTCCTCATTGTGAGCCTTGCGGATGTGGCGGTAGAGGTCCCCTGACTGTGTGTAGCTTCGTAGGCAATAGCGGCACTCATAGGGCCGCTCACGTGTGTGCACTGTGGCATGTCGCCTTAGTGTATAAGAACATGAGAAGGTCTTTCCACAAGTCTTGCAGGTGGGAACATCCTCTGTAAAATTTCCAAAGCTCCCTTGGGCTGCTTCATACTCAGGAGGAGGGTAGAGTGGTTCATGCAGGGCTGCTGGTGCAGGCAGGGGTGAGGTTACCAGCCCTCGATGATACTGCCCTGGACCTGGCAGCAGATGGTATGGTAGATGAGATTCCGGAGGCAGGAAGTGGTCACTTGGCCCCACCTCCTCTAGTCCTGTTGCCCCTGGCTCCTCAAAAGCCTCTGCCTGTGAGGGCTGTCCCCCATACACTGCTCCTCCAGGTGGGAACAGCCCTTCAGATCTGTGGGGCTGTTCCTCTGACAAGTCAGCCTCCTCATCAGAGATCACAATAGCTTCTACTTTTACCTGGACCAGTTCAGCTTCAActggggctggagcctgggatagaactggggctggcgctgggggtggggctggagctggggGATAGAAGCCTTGCAATGGTCCTCCAGTATCCCTTGGTTCCACCACCCTCAGACTCTCAGGAACCACATCAAGAGGAGTCAAGGGCTCCACCGAAACTCCTGGAAGGCCAGAAGAGAAGTAGTTTACAGGAATGGTCTCTGTAGAGCTACTTGGGCTGGCAAGAGAGACGGAGACATCAGCCACTGGTGGAGGAGGTGCCCGAAGATGTGATGAGTCAACTTCCATGCTTGGTTGTGTAGTGTCTGCCCCCCCAGATACTGGTGGCTCATCTGCAGGATGAGCAATGGGTAAGGGAGTGGCTGGACCCTTCCATTCCTCTTTGTTCCAGCGGGCTGACGGTTCAACAGATGCCAGTAAAGGCTGTGGGCCTCGAGAACTGCCTGACAAAAACTCCAGACTAGCAGG------ATTGGTTTCCTCTTCCTTCTTGGTACTGTCTGCCTCTGCCAGAGCTCGGGCCTGCAATCGTTGCTTACAAACCTTAACAATGTCATTCATGTGCAAGTAGCTGGCAGCTGCCAGCACATCTTCTAGAGGAGTATCTCCCCTAAGGGCCAGCTGGCCAGCATACATAAAGTCCAAAAGCAACCCAAAGGCTGGGGCCGTGACAATCTCATTGTGAATACACACCAGGTCCCTCTTGTCCAATTCCCGCTCCTTGTAGAAAAGCTGAAAGAATGGGCTGCAGGAGGCCAGCACAGCCCGATGGGCCAAGAACTGGGTACTACCAACCATCACAGTGCAGTCACAAAGGAAACCCTGGGACCGTTGCTCCCGCAGGCTCTGAAGCAGCTGCTGACTGTGTTCTGGGAACTCCATAGCACCCCAAGGAGGGAAGGGTGCCCAAGAGAGTTCCCTACCACTGACTCCC-TGGGAAGAAAGGACAGTAAAT-----TAGGTAACTTCCATAGCAACCTCCACATCAGCCCTTAAATAGAGCTGACCA-CCCAAGGCCTCTGGCAACATGCTGTCCCCCACCCCCAACCATGTTTCAGT---TAACTGCCCTTCTTTTTCCACTATCCCACCCAAAGACCTG---TTGGCTCCGCCCCCTGAGCCTAACCTTAGGAATCGTCCCCGCCCCTATTCGAAAAAAAGCCCTGCCCCCGGAAGTCCCGCCCCCTAAGCAGCCTGTGCTTCCTCGATTCTCAGCCGGTGCCTTACAATGAGTCCTCCAACTAGGACTGTCTTTTGCGCCCAAGCTTTCCCGGGTGATGCCTTCACGCCCCAGACCCGGAACTTCCTGCGCTTTTCCCTCTCGAACTCCA-AGGCTAAGGACTCCCAACGTAGGAACTAGCAGAGAAAGCTGAGCCCTCACCCACGACCTAGCAGCTACTAGGAGAGCTCCGCCTCTTCCCACCTCCGCTATCTTAATTGGCTCAAGCTTGCCCTCTCTTGTTGTGGATTGGCTCACTGTGAGCTACCCCGCCCCTCGAT---AACCGGCTTCTCCAAATGGGCAATCCCTGCCATTGCTCAGGCGTCGAGGCTCACAATTGGTTGTTGCTCCTGTCCTAAACTTTTCTTCCTCATCCCGCCTTC----CCTCAGAGACCTCAGGATTGGCTGAACTTATTCATCTGTTT---CCCATAGGGAAATT---ACCCG----------------------CCTGGGTGGGG--CGAGGTTGGCAGTAACGCAGTGTATTCGG---GAGTATACAGCCTGT---TTCTGCTGCGGACTACCTAG---AAGGAGAACTATAACAAAATGGTGTGATAACCTGTAGGCCCACGTC-TAGACCAAGCTCTGCCGAAACAGTGGGCAGTAAGCCACACCTCCCAAAAGTGCAGTTCACTCTTGCAGATCTGGT----CCTCGAAAATTACAGGATGCGCCACTAGTTCAGGCTCAGTAGT s bosTau2.chr29 13115040 2530 - 45822729 CGGTCGGGGAGCCAGGGAGGGGCTGCGCTCCCAGGACGGGGCCAGCCTCTGGATCCGGTTTGCTGCGTTTGGCCAGGTCCTCATTGTGAGCCTTGCGGATGTGGCGGTACAGGTCCCCTGACTGCGTGTAGCTGCGCAGGCAGTAGCGGCACTCGTAGGGTCGCTCCCGCGTGTGCACTGTGGCGTGACGCCGCAGTGTGTAAGAGCATGAGAAGGTCTTCCCACATGTCTTGCAAGTAGGAACATCCTCAGTAAAACCCCCAAAGCTTCCTGGGGCTGTTTCATACTCAGAAGGCAAGTAGAGTGGCTCATGCAGGGCGGGTGGAGCAGGCAGGGGCGAGGTCACCAGTCCTCGATGATACTGCCCTGGACCTGGCAGCAAATGGTAGGGTAGGTGCGGATCTGGCGGCAGGAAGTGGTCACTGGGCCCCACCTCCTCCAATCCTGCTGCCCGTGGCTCCTCAAAGGCCTCTGGCTGGGGGGGCTGTCCACCATACATGGCTCCTCCAGGAGGGAAGAGTCCCTCGGGGCCTCGAGGCTGTTCCTCTGACACGTCAGGCTCCTCATCAGAAATCACAATTGCTTCTACTTTCACCTGTACCAGCTCAGCTTCCGCGGGGGCTGGAGCCTCGGATGGAACTGGGAC------------TGCAGCTGAAGTTGGAGGATAGAAGCCTTGCAATGGTCCTCCAGTTGCCCTTGGTTCTACCACCCTCAGGCTCTCAGAACCCACATCAAGTGGAGCCAGTGGCTCCACTGAAACAGTTGGGAGGCCCGCAGAGAAGTAGTTTGCAGGGTTGGTCTCTGTGGAACTGCTGGGGCTGGCAAGA------GAGACATCAGCCACTGGTACAGGAGGTGCCTGAAGATGCGATGACTCAACCTCCACGCCAGGCTGTGTAGTGTCAGCCCCAGCTGGCATCGGTGGCTCATCTGGAGGACA---GATAGGTGAGGGAGCTGCAGAGCCTTTCCATTCCCCTTTGCCCCAGGGCCCTGATGTCTCTGCTGATGCCAACGAAGGCTGGGAACCACGGGAAGTGCTGGACAAAAACTCCAAATTAGGGGGTTGTGAGTTGGTTTCTTCTTCCTTCTTGGTACTATCCGCCTCTGCCAGGCCCCGGGCTTGCAGCCGCCGCTTACACACCTTGACAATATCATTCATGTGCAAGTAGCTGGCAGCCGCCAGCACATCCTCCACAGGGGTATCCCCCCTCAGGACCAGCTGGCCAGCATACATAAAGTCCAGAAGCAGTCCAAAGGCCGGGGCTGTGACAATCTCGTTGTGGATACACACCAGATCCCTCTTGTCTAGTTCCCGCTCTTTGTAGAAAAGCTGGAAAAATGGGCTGCAGGAGGCCAGCACAGCCCGATGAGCCAAGAACTGGGTACTACCCACCATCACGGTGCAGTCACAAAGGAAACCCTGGGACCGCTGCTCTCGGAGGCTCTGCAGCAGCTGCTGGCTGTGTTCTGGGAACTCCATAGCACTCCACAAAGGGAAAGGGACCTTCGGAAGATCCTCTCCAGTGGCTCCCTTGGGAAGAGAGGAAAGTGGGTTAGGGTAGGTAACCTCCCTATATATCTTAACGTCAGCTCTGAGCTATTACTTGCCACCCCAAAGCCTCTGGCAGCA----GCATCCCGACCCCAA-GATGCTCCCTTACATTACTACCCTTCTTTCTCCCAGGTCACACCCAGTGGTCTACTTTTAGCTCCGCCCCTCG-GCCTAACCGTAGCAGCAGGCCCCGCCCC-GTCC---ACAAAGCCCC-TCCCCGGAAGTCCCGCCCCTTAGGCAGCCTCCGCTTCCTCGATGCCCACCCGGTAGCTTCCAGCACCTCGTCCAACTAGAG-----TCTCGACCCCAGGCCTTCTCGGGTGATACCTCTTCGCCCTACTCCGGGAACTCCCTGAGC----CTCTCTCGAATTCGAGGGGCTAAGAAGTCCGAGGGTGGGAACTAGCAGAGAAAGCTGA-CCCTCACCCACCAACGAGCAGCCACCGGGAGAGCTCCGCCCCTTCCCGCCTTCTTAGTTTTAATTGGCTCAAATTTGTCTTCCCTCGTCTCGGATTAGTTCACTCTCTACTAACCATGCCCCCGACTCAGGGCGGTGTCTCCAAGTGGATGCTGGTGGCCGTCGCTCAGGCAGCTAGGCGCCCGATTGGTTAGCGCTCCTGTCCTAAACTTTTTCTTCTCGTCCCGCCTTCTTTGCCTCGGAGCCCTTGAGATTGGCTGAGCTTCTCCATCTACCTGAGGCTGTGGGAGGGCTGGGACCTGTGAGCAGTGGAGCGCGACGCCCTCGGGGCGGGGCTCGAGGCCTGCCACGGCGCAGAGCGTTGTGTCTTAGCAGGCAGCATGTCACCCCGGCTGCTGAGTGTCCGGGAAAAGGAGAAC--CAAGAAACTGGTGTGGTACCCAGGAGGTCCGGGTCTTAGACTCGGCTCTGCCT-AACCGTGAGCGAT-GGCTACACCTCTCTAATCTGCAGTTGTCTCTTGAAGGTCTCTTCATCCCTCAAAAACTTGAAGATGCCCTACTGCCTTACTCCCCGCAGT a score=15290 s mm7.chr19_random 1516095 654 + 2598976 GGCAGGCCTGAGGGGCGGGGCTTCATG--TATCCCCGCCCATGACGTTAAGACTCAATCAG----CGCTG-----------------------------------CGGAAGCGACCGCAGAGAAGTGGTGGGACTTCTGCAAGTGCTTCCGGAGAGGTCTCTGCGTGGGAAGTTCTGGGCGCTGCG---GGCCAAGCTTCTGC-AGAAGATGTTTTATCACGTGAGCTGGATGCGGGGTAACTGTGAGGG-GCAGTCAC-AGGAGGATC----CTGGAGGCCCGGA--AGGGCCGACAGGTCGCCTCCTGTCCTCAATGTGGCTGGCTGAGTCTCCATCTTCCTTTCTCTGCAGATTTCCCTGGAGCACGAGATCCTCCTGCACCCACGATACTTCGGTCCAAACTTGCTCAACACGGTGAAGCAGAAGCTGTTTACCGAGGTGGAGGGGACCTGCACTGGGAAGTGAGTTTC---TGCTTCACAGAGAGGTCTGCTGAA----TGCACGCACAATGGCGCTAGTCTCTAACCTCTTCTTAACTCCT----TCTGTCAGGGCT--TGTCGCTTACTCTGAGGAACCCTTTCACCCCTCCAGGCACCTGAAGCAGCCAGTTTTTGCCTGTTTTAG-----------ACACTCTGAAAAGCTACTAAAGAAAATTTTCTTCCCTTATGTGAGATAAGACCGTTATTATGCAAATGTTTTTGAGttttgagatg s bosTau2.chr29 13137839 709 - 45822729 GGCTGGACGGAGGGGAGGAGCCTCATGGGTTTCCCCGCCCACGACAGCGAAGCCCAATGGGAACCCGCGGAGGCTGTGAGTCCCGCCCACTTTTCTGGGCAGGCCCGGAAACGGGGTTGGAGAAGTTGCTGTATTTCCG---GTCGGTGTGTAGGCTCTGCTGCTCGTGAAGCCGTAGACCCTGCTCCTGTTCAGCCTCCTCCTGGAAGATGTTTTACCACGTGAGCAGGGCACCGGGTGGCGGCGAGGGCAGGGTCAAGAGGAGGAGCGAAGCAGAAGGCCGGGACTAGGGGCGGCTTCTTGCCTCATATTCCTCCCGCTCCTTGCC-CGAATCCATTCCACTTTCCCCACAGATCTCCCTGGAGCACGAGATTCTTCTGCACCCGCGATACTTCGGCCCTAACCTGCTCAACACGGTGAAACAAAAGCTCTTCACCGAGGTGGAGGGGACCTGCACCGGCAAGTGAGTGTCGCACCCTCCCTA-------CCGCTTAAGCACTGCGCACACGGCTTTCTATGCCTGCATCCCCTTCCCAGCGCCTACACACCGTGAAAGCTTCTGCTACCTACCCTGGCAAACTCTCTCACCCTCCCAG---------GCAGTTAGCTGCTTCCTGCTTTGGGTTCCTACGGTGCCCTCTGGGAAGCTCCGTA--ACAACTTCCTTTGTTCAGCCAACATTTGtcattaactcagcaaacatttctgaagctccagctg a score=15122 s mm7.chr19_random 1517223 330 + 2598976 CTTCTTGATCAATGAACCATCTGAACAGAGGTTCTTTCACACAGAGACTCTTATTGCTGGTGGCTTTTCAGAGGCTCTTCACATA-GCTGTCTTC-----TTTCATTTTTCATGCAGATATGGCTTTGTAATTGCTGTCACCACCATCGACAATATTGGTGCTGGTGTGATCCAGCCAGGCCGAGGTTTTGTTCTTTATCCAGTGAAATACAAAGCTATTGTTTTCCGGCCCTTTAAAGGTGAAGTGGTGGATGCTGTGGTCACTCAGGTCAACAAGGTAAGAGTATTATTCATA-GAAAGGTTATGGGGTATTTCCT-------AAGGTGAGGGTTCAGTCCC s bosTau2.chr29 13139413 322 - 45822729 cttcttaaccactggaccaccagg---gaagcccTGCCG--------------TGGCAGATGG--TTTCAGAGGCCTTCCACACACAGTGCCTTTCAGTTTCTCTGCCTCCTTGCAGGTATGGCTTTGTAATTGCCGTCACTACCATCGACAATATCGGTGCTGGTGTGATCCAGCCAGGCCGAGGCTTTGTCCTTTATCCGGTTAAGTACAAGGCCATTGTTTTCCGGCCCTTTAAAGGGGAGGTCGTGGATGCGGTGGTCACTCAGGTCAACAAGGTAAG---ACCATCCACAGGGGAGGTAGTGGGAAGGTCCCTCTTttagaagatctgggatgggtccc a score=23763 s mm7.chr19_random 1520064 542 + 2598976 AAATGAAAGACTACAGAGAGAGAAATGAAAACAAATGCTACAATTTAGACTGTTACAAAACACGAATAATATGATTAGGAATCAGATAAAAATG-----CTCCAAAGCCTTTG--------------AAGCAAGATCATCCATTTTCCTTTTAGGTTGGACTTTTCACAGAAATTGGGCCTATGTCTTGCTTCATCTCTCGACATGTAAGTCTGGGCATCCTGGGTGGAGCCAAGGAAAAGAAACCAGTCGGTCCATAGCTATCATCTATTGATGCAGCTGTTTGAAGTGCTAAC-CTTTGTGTCAATTTCCTTCTAGTCCATCCCTTCAGAGATGGAGTTTGATCCAAATTCAAACCCCCCTTGCTATAAGACCATGGACGAGGTGAGCGAGTGTGGAGGAGTGGTGAGAGGGATGAGGAA---AGCAACACTGAGA------CTGGGCCTGAGTCTGCTTGAC--CACTGTTCTCTCCTTTCCATAGGACATTGTGATTCAGCAGGACGATGAGATACGCTTGAAGATTGTAGGCACGCGTGTAGACAAGAATGACATTGTGAGTCTCTTG s bosTau2.chr29 13140055 557 - 45822729 AAATGAAAGCTTGGGAAAACAAACAC-ACAACAAACTTCACAGTG------GTTTCAAAACATGAAGAATATTGTTAGGAACCAGATAAAGATGGGAGGCTTAGGAGACTTTGGGGGACAAAAGAAAAAGCAAGGTCTCTCTTTTCCCTTCTAGGTTGGACTCTTCACAGAAATCGGGCCCATGTCCTGCTTCATCTCTCGACATGTAAGTCTAGGCACGCTGGGTGGGTCTAAGGAGGAGA------CCTGTAC-TCGTGAGAATCTACTGAAGCATCCTTTTCAAGTGCTCTTACCCAGTTTGACCTTACTTTCAGTCCATCCCATCAGAGATGGAATTTGATCCTAACTCCAACCCACCGTGTTACAAAACGATGGATGAGGTGAGTGGGCAGAAGAAATTGGTGAGAGGGCCAAGGGAATGAGCCACTCTGAGGGAGGGTATAGGCCTGGGGGTTTCTGAATGTACTGTTCCCTCCTCCCC--AGGACATTGTGATTCAGCAGGATGATGAGATCCGCTTGAAGATTGTGGGGACCCGTGTGGACAAGAATGACATTGTGAGTCTCCTG a score=15174 s mm7.chr19_random 1520940 642 + 2598976 GATCTGCTAACCTTTTGCCACCCACAGTTGTTGAGGGTTCTGGGCTCTTTTTTCCTGAGGAGGGAATGGAT-GACAGAAGGCTTGGGATTGGGG---------------TGGGCT-------GCCTCATCTCCCTCCCTCTCCTTCCTCCT--AGTTTGCCATTGGCTCTCTGATGGACGACTACTTGGGTGAGTGCCTGACATGGCTGCTGGGACCTGGGACCGTTCCCTGAGGAAGGGTGTGCAGG-AGAGGGGATG-GTGGAGGGCTTAATGTTCCTCCCAGAGACATAAGAGGTTCTCATTCTGTTT-CCTAGAAGTCC-ATGATACCTG-TCCTTGGGGTGGGAAATCCTTGGCTTTTGGCTGCCGGGGAACTCGGTGTCTGACTGATGCGTTCTTTCCTGATCTC-ATAGGGCTCGTGAGCTGAGTGAGGGAGCGTCCAGCTTGGTTGGATCCTGATTTAGGAAGTGTGGCTTTCCGACTTGAGTTCAGCACCAACTTAACTTTCCTA------CCGGAGGTTCAATCTGGCCACTGTTAGGGAGGCAAGAAAGGCTCCTTGTCCTCAG-------CTGTTTCTTCC---AGCTGAGCTG-TGCCCTGAGACTTT--ATTCTGTGCTCTAACCATAAACATGTTGTCCTTGTTTCTCATGGAAATGTTGTCTTCT---CTTGGTAGAAA s bosTau2.chr29 13140637 640 - 45822729 GAGCTGTTGCATTCTTCCTATTCAGAGTTCCTGGGGATTTTGTGCTCTCCTGCCAGGAAGAAGAGATGGGTGGGCAGAAGGCCTGGGGCTGAGGGTTAGAGGAGAGCACTCTGCTTGCTTTGGCTTCATTTCCAT--TTTTCTTTCCTCCTGCAGTTTGCTATCGGCTCCCTGATGGATGATTACCTGGGTGAGTGC----CAGGGTTGTTG---------------TCTGGAGGAGGGGTGTGTGGGCACAGGAGGTGAATATGGAATTTGATGCCTGAGCCACTGATGAAAGAAACTCTCATGTTGTCTGCTTGGAAGACCAAGGACACTTGCCCCCTGGAATGAGAAGTGCATGG-TTAGGGCTGTC-CCGAGCTCTGGGTCTAAGCACTGTGCT-TTTTCTGTTCTCGGCAGGGCTTGTGAGCTGAGCACCATGAC--CCACCTTGTTTGGTCCCTG-TCTAGGAGGTGTGACTGTCACAC-----------------------TTCCCATGGTGTCCAGAGGCCCAGTCTGGCTGCTATC-GGGAGGCAAGGAGGGTTCCTTGCCCTCAGAAGACACCTGGCTCTTCCTATGGCTTAGCAGCCACTCCCAGATTTTTGACTGTGTGTTCTAACCATAAAAG----GTCCTTGATTTTCATGGAAGTGTCCTCTCCTTTCTTTGGTAAGAA a score=567 s mm7.chr19_random 1524198 55 + 2598976 CTTGCTTTTTCACTTCCGTTGCTGTTGAGTTACACAGAGTCG---------------------TGCAGAGCTGCCT s bosTau2.chr13 31111274 73 - 62721844 CTTGCTTTTTCCCT---GCTGCCATGGAGCCGTGTGGAGGCGGAGGTTCGGGTGCATTAAAGATTCGGCTCCACCT a score=20994 s mm7.chr19_random 1524253 439 + 2598976 CCAGTGCCAC--CCGAGGAAGGCACTGCTGCTGGAGGTGTAATCGATGTCAAAACTGCTCTCTAAGAGGTGTCAAAGGCAGCCCTCGTTCATGATGGCT-GGCACA-GGCAAACATGAAGCTGCCAGAGCCTTGGACGAGCACCAAGCCCATTTCTGTGGGCTTGCAGCTGACTGTGACAAGCTCAGGTGTGTTACACTGGCGCAGGCACTTTGTGTCAAGCACCAAACCAACCTAATT----------ATAAGAGGAAACTTGGGGAATGG-TGGGCCTAGGTAAAATAATCCAGAGGAAAGCCACATAAAGCAGTTGGTTGCAGTTGTGTAGTGGTTAAGGGCTATGGCAAAGAATGGCAGGCTTAGGATGTCATCATGTCATCAAGGAGGACTTCAAATGCAAGACATGAAAAAATAAAAAAA-----TTTGGCTCAAaaagaaaaagaaagagaa s bosTau2.scaffold7252 33133 451 - 39833 CCACCGCCATGGCCGAGGAAGGCATTGCTGCTGGAGGTGTAATGGACGTTCATACTGCTCTGCAAGAGGTGCTGAAGACCGTCCTCATCCACGATGGCTTAGCACGTGGAATTCGCGAAGCTGCGAACGCTTTAGACAAGCGCCAAGCCCATCTCTGTGTGTTTGCATCCAACTGTAATGAGCCTATGTATGTCAAGTTGGTGGAGGCCCTTTGTGCTGAACATCAAATCAACCTGATTAGGGTTGATGACAACAAGAAACTAGGGGAATGGATAGGCCTCTGTAAAACTGAGAGAGGGAAAACCTCGTAAAGTGGTTGGATGCAGCTGTGTGGTGGTTAAGGACTATGGCAAAGAATCTCAGGCCAAGG--------ATGTCATCGAGGAGTACTTCAAATGCAAGAAATGATGAAATAAAAAACTGATTTCTTGTTTAAAAAAAAAAATAGAGATAA a score=10551 s mm7.chr19_random 1525678 520 + 2598976 AGCCACTTTTTTTCCC-CTGTGGTAATGTTGATCTCATTACTGCCTTCCTGAGCACCTGCCTCTGCCCCAGTTGGGAGTAAATAAACCCCAGACAT-----ATACAGCTTTACCAGATCTGATAGTACCCACCAGGTCTGGGCCTTCTTC----CATCCTGTCCTACCTCCAAG-TGGCCAGTGGTTGTCCAGACATATAAA-----TGTGAGCAGCCCAAATGCTA-CTGACTG---AGCTGAT---AAATTAAGACCTCTGGGAATGGCCTCT-----CGTAGGTGGACA-GACACTTCAGTCTGCAGCAGGCGTGG-----AAACCACACCAAATGTCA------ACATAACTGGAAGAGACTCAGCAGGGT--CACTAGCCTCAGGTGGTGTTGCCATGGCAACCCCAGTTCCATCCATTTGGCtttttttttttttttttttttttttttttAGCTCAGTCCTAGAGGATTTTCTTTTCCAAGAGGCAGCAGCAGCAGTATCAAAACCTCAAAGAAAGGGA---------TGTGTATGGCCATGTTCTCATGCAGGAAGCTCCTTT s bosTau2.chr29 13142684 530 - 45822729 AGCCACCTTTCTCCCAGCTGTGGCCAGGT-GAT----TTACTCCTTTCCCTGGCCCCTGCCTTGACTCAAGCTGGAGGCAAATCAGCCCCAGACAGCTTGGATGGTGCTTCACTGCGTCCTGCAGGCC--------TCTGGGCCTTCCTCTCTTCATTGTCTCATGCTGCCAAGGTTACCAAAGGCTGTCCCTACCAATAACACCTTTGCAAGGAGGCC---TGCCAACAGACAGGAGATCTGATCTCAGACTCAGAACTTCGGAGTTCTTCCTTTCATGCATAAGTGGGCAAGACACTCTAG---GGACCAAGCACAGTCCTGAGATTACATCATATGTCATTCTGAGTATGACTGGAGGAGTTTCAGCAGGGTGTCAGTCTCCTTAGGTAGTGTTGCTATGGCAACCCCAGTCCCATCCACCTGGCTTTCTGGGCTCCGGCTCCT-------------CCGGTCTC--AGGATCTTCCTGTCT-AGAGGCAGCAGC------ATCTAACCCTGAGAGGGGGGAAGGGTGAGGTTGTGTACATTCATGCTCCCCTGCAGAAAGCTCCTTT a score=20866 s mm7.chr19_random 1528262 913 + 2598976 AACCCAAAGGAGCTGTTGCTTTAAGAAGCGCCA---------CTCACGTGACCAACGTCGCCCTAGTGGCTTTACCCGCACATACACACTGGCCAATCTTGAGGTGGTATGCCTCTTTGGTGGGCGGAAAACTCAGTAGACGGCCACCGATTGGCTCCGCATATGGAGGGCGGAGCCTGGGCGCGGAGAGAGGGAATTACCGTGAGCC-GGTGAGTGGAAGCA--------------GCCGTC----------------CCTCCCCAGCAGGCGCCCTCCCAACCCCGGAGTCTGCAGGTGAGCAGGTCCTGCCCCGATCCAGGGATCGCTTCCCGCGGTGCTCTGCTCACCAGCCACGGAGCCCGC------AGGACCCCGCCCCCTTCACCGAGCACGTGACACAAGTTCTGTAATCCCTGATCTCC-CCACTCGACCCTGCACCCTTTGGAGCTGGGAGGGAG-GAAGGTGGGTGGGAGGATTCACAACGTAGAAGTCCTTGGAGATCGGTTCCCACGCCTCCTGGTCAGGAGGACTTGGAACTGAGGGTGGGCAGGACGAGACTAAAGAGTGGGAGACCTTGGTCACAGACCGAATTTTGTGAGCTATCAAGACAGGGCTACATAATAGAGAAACTCCCTTCTAGCTTTCCACTTGCGCAGCACTGCATGGTTccattttacagatggggaaactgaagcgt-aCTCATCCAGTGCTGAGTCTAGTGATGGGACTTCAAATCTTTGGGCTACAAAGCCAGGCC-TAGTTCAAACACAAGCCTACAGCTCATGAATATATTAtcttgagtcgaattacaacagtgtttgagacccagcagtctaatc-acccggtgcttagtgtttggtcttggacagttcaggtaatct-----ctctgagctaagacttcctcagctttgtgaaatggacaaatgtgtacaattatatatctcataCAATATTA s bosTau2.chr29 13143912 925 - 45822729 AACACCGAAGTGCTGTTGCTTTAAGAGGCGCGAGTCTTCCATATCACGTGACCTCTGACTTGACCGAGCCTTCTGCAGAGCCATCACGGTGGCCAATCGAGTAGTGGGCAGCTTCTTCG-TGGGCAGGAATTCCTGAAGGCGCTCATCGATTGGCTGTGTTCGTGGAGGGCGGGGCCTGATCGCCGAGAGAGGGAATTAGTACGAGCAGGGTGAGAGGGGTCATTgccgcagctaccgccgccgcagtcaccgccaccgccctcttggtagccgccttcgccgtcCCTGAGCCATCAGGTGAGCAAGCCCT-CACAGAGCC--GTCCCGCTGCAGGTTGTGC---GCTAACCGGCCTGGGCGCCCGCTCCGCTGGGGGCCCGCCCCCTTCGCCGACCACGTGACCCAAGTTCGGTAACCTCTGACCTCCTCCTCCCTGCCCCCCCACCTCTCGAGCTGGGATGAAGCGCGGCCGGGTGGGAGGATGCGCTTCACGGAGGCCGGGGGAGGTCAGTTCCCACGCCTCCTTACCGGTGTGGCTAGTGGCTGAGGATGTGGA-GAGGAGGTTGAGGAACTGGAGACCTTGGTCAGAG-CCGGACTTTGGGGGGTGT---AATGTGGGCACGTAATAGGGAAACTTCCTTGGCGCCTTCCGC--GGGCAGGACTTGCTGCTCCTACTTTACAGGTGGAGAAA--GAAGGTTAACACGGCCATTGGCGGGTCTC------CAACGCCAAGTCTCTGGACTGGGAATCCAGGCCGTGTTTCCCACAC-AGTCCGCCGCTC-----------CTCATGATTAGAATGAgag------ttgagttcttgctcccttacctaggtagtgctggccagatgatcttgggaaaatcatttaacatgtaaccactcagctctgatttccttggc--tgtgaaatagacaca-gtgtttattta-atacctctctcattgtta a score=48911 s mm7.chr19_random 1530612 1790 + 2598976 GGCTCTGTCTTTGTGGCTTTTAAAGCAAGATGAGCAGGCATGGTTGAGATGGTCTT--GCCTGCCTCACC--CTTGGAGGAATCTCAGATACTGGGCGGGT-TTTCAACCTTTCTTTTCCACTTGCAGTTCCACCGGGGCCATGTCAGAACGAGAGGAGAGGAGGTTTGTGGAGATCCCTCGGGAGTCGGTCCGGCTCATGGCAGAGAGCACAGGTCTAGAGCTGAGTGACGAGGTGGCCGCTCTGCTCGCTGAAGATGTGTGCTACCGTCTCCGAGAGGCCACACAGGTGTGCTGCTCTCCGTCCACCTCTCTCCTCCCTATGATCTCCTGTTACCTCTTCCCCACTGACATGCTTGGCAACAAGTGTATATCAGGTACCATGTGCTTTGAGGTCAGAAGACAGTGTAGGC---CTGTGCCTTTGAAAGAGTCTCTTTCTAGCCAGTCAGGTGTCTAGAAAAGAAAACACTCGCTGGGCACTTTCTCATAACACTTTCTCACAGTGTCCTGCTGCCTAGGCGGAATAGCTAGATAGTGACACTCTGCCCATGAGTCACTGAGGCACTCGGTGGGAACATGACATGCGGAAGGTGTACAAAAGCTGAGCTGGAAACGCAGGCTTTCTGATTGCTGGTGTGGGGTTCTCTGTCTTTTCAGTCTAGCCCATTTCCCTTGGGGGTTCTCACATTTGCTCCCTGCCCCCTGATTCTGGATTCTGTTCCCCCTCTCCCAGAATAGCTCTCAATTCATGAAACACACCAAACGAAGGAAGCTGACGGTGGAGGACTTCAACAGGGCTCTCAGGTGGAGCAGCGTGGAGGTCAGTGGGGTAT-GGCCATGGAGGGCCCAGGGGATGTGACGCCACCTCTCCTGTTCAGATTGGGGATGGCAGTGTGGTGAGACGTGGGG----------------------------------------ACAAACACCTAGTGCAGCCGGCCAAG-CCAGGTGCTGGGCCCAAAGAG-TGGAGAGGCCCATGGGCTCCCAGAGGTTGGGGAAAGTTTCAAAGAAGAGGTAGAGATTGAGCCAGGCCTTAAGATGTGCTGAGGGAAATGAACTTGAAGAAATGAAAAGGC-ATGCTGGGTAAGGAAAGAGCCTGAAGAAACATGGGGATGTTGACCTGTCTTG--GTATAGCTCTGGGGCAAGGAGTTGAGGGAGGAAGGTAGTAT---------------GCCTTGAGAATTGTTTGGGTGTGCATGGGAGAGACTGGCACCTTAGCAGTGGGCCATAGACCCCTTACAGTTATGGGAGGTAAGACAACATA--GAACCTTGACCCAGTGAACCA------CAGACAG-----------ACAGCTCTGATCCCCAGGTATCTCTGGCTTCTAGGGGATATGTGAACTACTCTGCAGCGTAGGCTTCATGCCCTGGATCAGGAGAGCCGAATCCTGGCTCTTTTTCCTTCACTGAATTCACCCTGCTTGTCAATTCTCTCTCTCTCCAGGCTGTGTGTGGCTATGGGTCCCAGGAGGCATTGCCCTTGCGCCCTGCAAGGGAGGGTGATCTCTACTTCCCGGAGGATCGAGAAGTGAGCCTGGTGGAGCTGGCACTAGCCACCAACATCCCCAAGGGCTGTGCAGAGACAGCTGTCAGAGGTTGCTGCTAGGCTCCTTCCTGGGCTTAGGACAGGAATTGGGTGGTCTGAGTGGTGCTGATGGGCCAGCTTTCACGTAGGGCAGAATTTGGAGGGGTAAAATCCC-AGCTGACCTCCATCTGTATCATCTGATTCTAGTTCATGTCTCCTATCTGGATGGCAAAGGAAACCTGGCACCTCAGGGATCAGGTAA--GGCAGTGTGGATAGTAAGGCTGTC s bosTau2.chr29 13146809 1718 - 45822729 ggttCTTGGTTCAAGGATTCTGGAACAAGAGCAACAAGATTGGTTTGGAGGGCCTTCAGTCAGGCTCCCGGGCTCAGAGG-------GAGACTGGGCTGCCCTTTCCCACCTCCTTTCCCACCCCCAGCTCCATCGGGGCCATGTCGGAGCGAGAAGAGCGGCGCTTCGTGGAGATCCCTCGGGAGTCCGTCCGGCTCATGGCAGAGAGCACAGGCCTGGAGCTGAGCGATGAGGTGGCGGCCCTGCTCGCAGAGGACGTGTGCTACCGACTCAGAGAGGCCACCCAGGTACACTCCCC------CTCCTTGTCCCTCCCTGGGAC-------TGCCCTCTCCCCAGGGGTTTATT---CAGCTAGTATCTGTCAGGTCCC---TCCTTCGTGCTCTGAATACAGTGGAGGCGGTCCCTGTCCTCTCCAGGGCCTC---CTAGGCAGCTGGGCTTCCAGCGAACCAGGCGCCTGCTGAGCATCCTCTTGTGCCCCTCAC-CACAGC--CCCGCTGGGCAGGCCCGACGGGTTCATCATCACATCCCCCATGTGAGAAACTGAGTCACAGAGAGGGCATGTGACATTGGGA----------------------------------------------------GTTGTTTGCC----------------------------------------ACCCCCTGCTCCCTGTCGTCTGACTCTGTTCCTTCCCTCACAGAATAGCTCTCAATTCATGAAACACACCAAACGGCGGAAGCTGACCGTCGAGGATTTCAACAGGGCGCTCCGATGGAGCAGTGTGGAGGTGAGTTGGGCACAGGCTGCAGAGGGCTCAGCTGGCACGA-GCCTGCCTACATGCCCGACTCAGGGCTGGCCACACAGTGAGACGTGAAGGCCCAGCGCACACACGAGGGAAGGTCACAGCCACCGCAGCACAGGTATTGCGCGCAGCCCCCCAGGGCCAGGCGTT-----cagagaggcagaggtggccacggaggcccaggggctagggaaggcttcttggaagagctggcacttgaactgaacctgcaaaggag--gccgggattagattcagttgcaagaagaggccattctgggtgagggagcagcctgttcacgggcgtgggtgtcagaacatcctgcatggtcgTTCCTGGGCAGGGGGTCCAGGGAAGAAGATCACGTTTAGAAGAGAGGAGCGTTTTCAGAGCTG-----GTCTCTGTGAGGAGGATCAGCAGCCTGAGGGTGGGGTTCAGGGTCCATGCAGCTCCGTGAGGAGGGACCACGTTCTGTTCCTTGACTCTGAGCACTGGTGCTGCAGCCAAGTTCCCAGTGAAAAGCCTGGAGTCCCAGGCATCCCCCTCTGCTCAGGGCC-TCTGGACTCCCCACAAACATAGGCTCTGGGCCCTGG-CCGGTAGCGCC-----------CCACTTACCTCCCCAGATTCAGCCTGCTCCCCAATCCTCTCTTCACTCAGGCCGTGTGCGGTTATGGATCTCAGGAGGTGCTGCCCCTGCGCCCAGCCAGGGAGGGTGAGCTCTACTTCCCCGAGGACCGAGAGGTGAACCTGGTGGAGCTGGCCCTGGCCACCAACATCCCCAAAGGCTGTGCTGAGACAGCCCTGAGAGGTGACCG-GGGGGTCCTCCACGGGGCGGGGACAGGAGCTGGGTCGTTGGAGGAATGGTGATGGCCTGGT---------GGGTGGATGGGGCAAGGGCAGAATCTCGGGCTGAC--CCATCTCTCTGCTCTGGTTCTAGTTCACGTCTCCTACCTAGACGGCAAAGGGAACTTGGCCCCTCAAGGATCAGGTAATGGGTAGTACGGGGAAC-GGGCTCTC a score=14748 s mm7.chr19_random 1532524 541 + 2598976 TCCTGCTTACATGGGGTTCTTGTGG-GTGGGTTGTAGTTCTGGTCAGGGGGCA------GCAGCCTCCAGAAGGCTATACCTCCATCTGTGACTACTTCCTTCCTGTCTCCTCACAGTGCCCAGTGCAGTGTCTTCACTGACAGATGACCTGCTCAAATACTACCAGCAAGTGACACGGGCTGTACTGGGAGATGACCCACAGCTGATGAAGGTGAAAGAGTGAGCCTGACT--AGGCATAAAGTGAAAGTTTTAAAACT---TGAGATATTTTCAGCTATCTGGTTCCTGTCCTCCATAGGTGAACTAGTTACTAGGCGGGAACCTGTTCTCCAGTGGTGTGTGTGCTCTGAGTGGTCTCCTGCTATTG--------CCAGTCCCGA-CTCCTTTATGCTAGAAGAGTAGAAACCCTTCTTCCTTGGGCCGTGGGCAGCACAACAGGTGCTTCTAATGATT--------------------GTGTTCCCACACCTTCAGTTGCATTCCTTTTTCT-GGGTGTCCATTGATCTGGAACCAGTTGAGGCATTTAC--------------TTATCTGGACTTGGTAAGGAAAGGAGAAA s bosTau2.chr29 13148847 578 - 45822729 TTCTGTCTGAACGGGCTCTTTATGGCGATGGGGGTTGTTGGGGGTGGGGAGCAGGCAGGGAGGCTGGGAGAGGGCTGGGCTGCACCC--TGACCACCTTCTGCCCACCCTCTCACAGTGCCTAGTGCTGTGTCTTCACTGACTGATGACCTTCTCAAGTACTACCAGCAAGTGACTCGGGCTGTGCTGGGGGATGATCCACAGCTGATGAAAGTGAGCAAGCGGGCCTGAATTGAAGCATAAAGTTCAACCCTCAAATCCCCATGGAATTCCTTCAGAGGCCTGCTTCCTGTTCTCTGCAGGCTGGCTGAT--CTGGGT-GGAAGCTGCTCT----TGGTGGGGG------GCGTGGTGCTCTGCAACTGGCCCTTCTCCAGCACTGCTCCCCTTCCTGCC---CCAGTAGGAACCCTG-TTCCTTAGGGAATGGGCAGCTCTGCAGGGTCCTGTGGAGTGTGGGGACGGCACAGGTGGTCAGTGCCCCTACACCGTAATCCAGAGCCCTTTCTTTGGGGTGTCTGTTGACCTGGAGCCACGTGGGGCATCCACCTTGCACATTTCATCTGTCTGGCCTTGAGAGGAAGTAGAGGGA a score=2800 s mm7.chr19_random 1534185 58 + 2598976 TCTTCCGCCTATAAGAGTAATACCAGTATGTATTTACTCTGGAGCTACT-TAGAATATA s bosTau2.chr29 13149816 59 - 45822729 TTTTCTGCTTATAAAAGTAATACCAGCATATGCTTATTATAGAAGTACTGTAAGACATA a score=41128 s mm7.chr19_random 1535698 980 + 2598976 AGCGGAATTTCTGAATCAGGGCATGAACATTTAACATG---ATAATACGTGGATCCTAACCTAGCCTCCAGAATGGTGGCTTTTCCTTTATTGAGGTGG------------------------TTCCTTTCAGGTTGCCCTCCAGGACCTCCAGACAAACTCCAAGATTGCAGCACTCCTGCCTTACTTTGTTTATGTGGTCAGTGGGGTAAGTGATCAGTTCTCTAGC-------GATCT---------CTATGACCCTTCTCTGTTTAGGGCTCATAGCAGATTCTTC-------GCAAGCTC-CTGTCTCTCCATGCCACCACAAGCCATCCTCTCCTACCAACAGGTAAAATCTGTAAGCCACGACCTGGAACAACTGCACCGACTACTGCAGGTGGCAAGGAGCCTGATACGGAACCCACACCTGTGCTTGGGACCCTATGTCCGATCCTTGGTGGGCAGCGTGCTTTACTGTGTCTTGGAGCCACTGGCCGCCTCCATCAACCCTTTGAATGACCACTGGACTCTGCGAGATGGGGCTGCCCTTCTACTCAGTCACATATTCTGGTAGCCA-CTGGGTTCAG-GCTGAGCAGAGGGTGGGATAGCCTACAGAGTTGATTGGGTTGTGGTAGGGAGCTGTAGGAAGCCTTTGGCTTTTAAATTAAATGTT-----ACATGTGGAACTTTTCCTTAGCCC--CCTAGCTGACATG-TCATGGT-------ACAGTTATAAAGATAGCAAGATATTAGTCTTTTGTCCCTTGGATCCTGGGCCAGTCACATCTGGCAGCCTGTCTCA------GAGATGTCTACAAATGTCCAACTCTTTATGTGTGGTACTTCATTCTCCTTCCTGACTGTTGCTTCCACAGGACGCATGGAGACCTTGTAAGTGGCCTGTATCAGCAGATTCTGCTGTCCCTGCAGAAGGTCCTGACAGACCCTGTTCGGCCTCTCTGTTCTCACTATGGGGCAGTGGTGGGGCTGCATGCTCTAGGCTGGAAGGTGAGGACTCTGGC-TTTCTCTCAGACCTTTGAGAG s bosTau2.chr29 13150182 1038 - 45822729 agtggcattgctgagtcaaagtatgaatatttaaaatgttaataatacataggtgccaagttttcctttaaagaggtatcagtttatac-tTGGGGTGGGTGGACCAGGGCAGCGTGGCCCCTTCTGTTTCAGATTGCTCTCCACGACCTGCAGACCAACTCCAAGATCGCAGCGCTCCTGCCATACTTTGTGTACGTGGTCAGCGGGGTAAGTGACCAGG-CTGCGGCAGGGGCGGATCTGTGGGGAGGCGATGATGCCACAGGCTGTAGGGCTCACGGCAGGCGCCACCAGACTAGCAGGCTCTCTGCACCTTTATGCCCCCCCAAGCAGCCGCCTTCTCCCAACAGGTGAAATCTGTAAGCCACGACCTGGAGCAGCTGCACCGGCTCTTGCAAGTGGCGCGGAGCCTGGTTCGGAACCCACACCTCTGCCTGGTACCCTATGTCCGCTCCCTGGTGGGCAGCGTCCTCTACTGTGTCCTGGAGCCACTGGCTGCCTCCATCAACCCGCTGAATGACCACTGGACGCTGCGGGATGGCGCTGCCCTCCTACTGAGCCACATCTTCTGGTAGCCACCTGGGCCTAGCGCTGGTCA-AGGGCGGGACCG-TGGCAGAGCTG--TGGCTTGGGGT-GGGAGGTGGGGTGAAACTCTGGCTTTAAGGCCACAGGTTGAGGCGCTGGGAGTGTCTTCCCTCTGCTCTTCCAGGTTGTTGTGCTTGGGGTTTTATAAACGGGGACAGAGACGCCAGGGGTTTGGTCCATCAGCCCTCAGGCCCTGGGC---------CCAGCGGCCTCGTTCACTACCCGGCGTG-CCGTGCACGTGCACCTTCCTGCGTGCTCTGCCTCGTTGCCCTGACTCAGTGTTGCTCCCACAGGACTTATGGGGACCTTGTAAATGGCCTCTATCAGCAGATCCTGCTCTCCCTGCAGAAAGTCTTGGCGGATCCTGTGAGGCCTCTCTGCTCTCACTACGGGGCTGTGGTGGGCCTGCATGCTCTTGGCTGGAAGGTGAGGACCCTGGCTTTTCTCACAGAACTATAAGAG a score=16830 s mm7.chr19_random 1588881 398 + 2598976 ATAGGAATTGGGTTG----GATCTTTTT------AGTTGTTATTGTTAAATGACATTGCGGTCAGTGCCTGACTGTTGTTTGTTTTCCCCAGGCAAGAAATTATTGAGCAGCTTCTGTCAAATATTTTTCACAAGGAGAAGAATGAATCGGCCATAGTCAGTGCAATTCAGATTTTGCTGACTTTGCTTGAGACTCGACGGCCAACGTAAGGTTTCCTTTTATCTCACTAACTGACCCGTCTTGTTTTACTCTTAGATGTTTTAAAAGCTACTAGTTAAAGTCTTAACAGGTGA--GCTATAGTAGCACGCCTTTGAAGATCGGGTGCTGCTGAATTTTACTGTTGTAGAGATAATAATTTCATTTATGTGAGCAC-----------------------CATGGTTTGACCAACAGGTTATTGGCAGCACTTT s bosTau2.chr29 3769919 420 - 45822729 ATAGTACTTGTATTACTGTGACCTTTTCTTCTGAAGTTGTTAGTCTTAAATAACATTACAGTTAGCGCTTGACTGTTGATTTGTTTCCCTAGGCAAGAAATTATAGAGCAGCTTCTATCAAATATTTTCCACACGGAGAAAAATGAATCGGCCATAGTCAGTGCAATCCAGATATTGTTGACTTTACTTGAGACACGGCGACCAACGTAAGTTTTCCTTCTGTTTCATGAAATGAGTCATTTGGTTTTCCTTTTAGAGTTTTTAAAAACTAAGAATTAAG---TTAGTGGTTTATTTTTACAGTATCATGCCCTTGAATTTCATTTGTTGA-ATATTTTTCTACTGTATAAATAGT-------TTTATATGAATGCAGTACATAGATGTAGTTGAAAAATATGCTTTAGTGAACA--CTATTGGCAACATTTG a score=2757 s mm7.chr19_random 1589378 210 + 2598976 CACTGACTGCAGTGTCGTTTATCTCCA------GATTC------------CCTTCTTGAGACTAACTTCTGTTGTTTTACGGGTCTCACTATGAGGGTATTGCATTTC-----------CGAAGCTGGATGAACAGGAGGCCGACCTGAGGCCTTAAGGACATTTTT----TCTGTTTCATAAT------CATAGTACGGTATGCTTTTCAGTAAGCCACTGG-------ATTTTATATGT----TGTCTTTTACAGTTT s bosTau2.chr29 3770463 245 - 45822729 tcctggttggtgtgcagttctcctccaagtggcgattcagggCTCTTCTGTCCTCTCTGCACTAACT--TGAGGCTTCACACGT---------GAGGTACTGCAGTTCATTAGGCTGTTTAAAAATGGATGGACAGGTGG----CTTGAGGCCTTAAGGAAAATTTTGTGGTGTGTTTAAGAATGAGAAAGATAGTCTGTTTTTCCTATTTGTGTGCCTCTGGACAAGTCATTTAATATTTGTCATATTCTTTACAGTTT a score=12705 s mm7.chr19_random 1599604 268 + 2598976 TGATATGGAG-AGCTTGAATGTAGTATTATGAAATTAAAGTAGTTACCTTGATTTGTTTTCCAGGTTTGAAGGCCATATAGAAATCTGCCCCCCGGGCATGAGTCATTCAGCTTGTTCAGTTAACAAGAGTGTTCTTGAAGCCATCCGAGGAAGACTTGGATCTTTCCATGAACTCCTACTCGAGCCACCCAAGGTAGGGTTGCTGTCTTCACTGTTACTG-GCAG-CCAGCAGTGTGGTGTTGGCTGTCACTGGGAGGTCTGAGAACCTT s bosTau2.chr29 3778537 266 - 45822729 TGTTACAGAGCACCTTGAATGGTTTGTTCTGAAATAATAA-AATTAACTTACTTTGTTT-CAAGATTTGAAGGCCATATAGAGATCTGCCCACCAGGCATGAGTCATTCAGCTTGTTCGGTCAACAAGAGTGTTCTAGAAGCCATTCGAGGAAGACTTGGATCTTTTCACGAGCTCCTGCTTGAGCCCCCCAAGGTAAGGCAGCTCTCTGACGAGTCGTTGAACAGTTCCGTAGTCTGATTTCAGCTGTGA---GAAGGTGGGTGAACCTT a score=4671 s mm7.chr19_random 1600214 226 + 2598976 TGGCCTTTATCCATATGCCTTGTCTAGTAAATGAGGGAT--ATTAGAATTAAAAA----------------TATCTACTTAATAAACTCAGATTCTTGTTTT-----------GTAAATCCTTGAGTACCTATGTATCAGTAAAATAAACATTTTTCTGTTTGTAACAGTTTCCTTTTAGGCCTTTGAAGTAAAGTTTATCTTTTGTGAT-CTGATTTTTGAAATTGCATCTTCATA-TGAGCTTGGGGACAATATA s bosTau2.chr29 3778895 250 - 45822729 TGGCTTTTATCTGTATATAGTGTCTA--AATTGATGAATGGAATAGAATTAAGCAAATTAAGTAAGATACTTACCTGCTTAGAAAACTCAGCTTTTTGTTCTTTTTTTTTCCTATAAATTCT-GTGTATTTACATGCAAGTAAAATAG----TTTTCTTCTCATAGCATGTCATTTTCACACCTTTGAGGTACACATTAATCTTCAAGACACTAATCTTGGAAGTCGGGTTGTCTTACTCAGAGTTGGAGCAGTATA a score=13524 s mm7.chr19_random 1602242 230 + 2598976 CTCAGCTAAATTTAATTTGAAAGCTTTTTTTTCCACAGAAAAGTGTGATGAAGACTACATGGGGTATATTGGACCCACCTGTGGGGAATACTCGATTAAATGTCATTAGGTTGATATCCAGCCTGCTCCAAACCAATACCAGCAGCATAAATGGAGACCTGATGGAACTGAACAGCATTGGCGTCATATTGGTGAGATTCTGCCTCATAGACGTTTGAAGTCACCCTTGA s bosTau2.chr29 3780896 229 - 45822729 cTAAACTGAACCTAATCAGAAAGCTTTTTCTTTCTCAGAAAAGTGTGATGAAGACTACGTGGGGCGTGCTGGACCCCCCTGTGGGGAACACCCGGCTAAGTGTGGTTAGGTTGGTATCCAGCCTCCTCCAGACGAATACCAGCAGCATCAACGGGGACCTCATGGAGCTGAATAGCATTGGGGTCATACTGGTAAGATG-TCCCTGGAAGATGTCTTCACTTGCCATTGA a score=4824 s mm7.chr19_random 1603104 211 + 2598976 GGAAATGGACGGAGCTGGATATTTGCAT----CACTTTCAAAACC------TTTTCTTTGAGAAGGCTATGCTCATTTTGTCTTTATGTTTCTGGAACTTTCTTCTACTTTCTAATATATTCTAGGCAAATTCAAACATATTGAATGAATAGACA-GTTACATGGACTATGAAGTGGTGTTTCAAACCACCCATTAAATAAAGTTTTGTTCCTTTTAATATG s bosTau2.chr29 3781724 206 - 45822729 GGAAATTTACTAAACTTAATATCTGTATTAGTCACTGTGAAAACAAAAAGGTTTTCTCGAAGAAATTTAT-----TATTGCCTTTATGC-------ATTTATTGTTGGTCTCTATTAGATTCCTTGCAAATTCTGACATGTTGAATGAGCAAATATGTTGTTTAGTCTATGGA--GGCATTTTAAACTGCC--TTTAAAAATAATGTATTCCTTTTAATTTG a score=17092 s mm7.chr19_random 1603720 545 + 2598976 TTCTTCAGTTGCTACTTTGTGAATGT-TTAAAGTGATGGCTTCAGCATTGAGCTAACTG-AAGAGACTGCACT-------TTTCTTTTGTAGGATATGTTCTTCAAGTACACATGGAATAACTTTCTACACACGCAAGTGGAAATTTGCATTGCTCTCATTCTGGCCAGTCCTTTTGAGAATGCAGAGAATGGCACAATTACTGATCAAGACTCCACTGGTGACAATTTGTTATTGAAGCATGTAA-----------GTATTATTTCCTCTTATT-------------GTGTTCTCC---GAGTGTGAAGTGAATTACAGTTGAAGGACAGACTGAGTAATGTCCAAGTTGAAAGGTTAAGCTATCACATGCTTATTTCAC-TTTGACTAGTGATTCTGTTAATCACA---TGGACATAACACCTCTCAATGAACTGTCAGCCCACTTCCTTGTACATTTCAGAAGTTTGAACAT------ACTTTGTGGGAGATAAATGAACCATAGATAATTATTACTGAAAATACTTCTACTGT------------------------ATTCCAGTGCTGAGTAGGTACCTGAACATGTGAAGAAATGAGCTTTAGTCAATG s bosTau2.chr29 3781955 609 - 45822729 TTATTGATTGATTATTTGGTGAATGTATTGAGGTAGTGACTGAAAGATTGAGATGACAGTAAAAGAAAGCATTACTTTTCTTTTTTTTGTAGGACATGTTCTTCAAATACACATGGAATAACTTTTTACATACACAAGTGGAAATTTGCATTGCACTGATTCTTGCGAGTCCTTTTGAAAACACAGAAAATAGCACAATTACTGATCAAGACTCTGCTGGTGACAACTTGTTATTGAAACATGTAAGCTTACTTGGTGTCTTTTTTTCTGCCACTCCTGGTTAGAGTAGTTTTCTACTTAAGTTATGAAGTGAATTGAAGTCTAAGGGTAGGAGGTGAGATTTCAGAATCTAAGGATTTAACTGTCCTATTTTGATTGTACTTTTAACCAGTGATACTATAAATCATATCCTAGGCAGTTCACCATTAGATGAACTTTCTAAAAAAGTTTCAGTAAACTCAATAGATTGGAAGATTTAGAAACCTTTTGGAAATTAAA-AAACAATACAAATTTA-----AAAAACACTTGAACAGTTAATTTGGCTTGCCTGAGTTTTCATTTTTGGTGCTGAACCTGTGACTGAAAGTGGGGAGAGGTGGGTTCTCTGCAGTG a score=3192 s mm7.chr19_random 1604634 181 + 2598976 TTGGGGGTCTCTT---TCCTGTAAAATATGATGTGATTTTTTTTTCCCTTTGGATCAGTTTTCAGAGGTCT----GCACTTTAATGCTTTTATCTA-----ATCCTGTAGTTCCCATGTGGTTTATTCCCAGACCTAGAAGGCAAA-ACGGCTAGCCAGGAACAGCCAAGTGACTAGAGAAGAAAAGTGCCATT s bosTau2.chr29 3782577 185 - 45822729 TCGGGGATCTGTTGTCTTCTGTTAAATGTGAGGTGGTGATTTTCC-------AAGTCGTCTTCAGGTGTCTTCTTGCTCTGCAGTTCTGTGA-CTATGGACATTCTCTCGCTCATAC-TGTGTTACCCCCAAAACTTGAAGACGGGCAAGGCTAGCCTGGAGTGACCAAGTAGATGGGGAAGACAAATGACCTT a score=7745 s mm7.chr19_random 1605408 153 + 2598976 ttTGCTTTAGTGTTTTAATGCTTTGACCATTAGGTTAATAATTGGACTAATTGGAGTGTTCTTTCTTATT-AGCTTTTTCAAAAGTGTCAGTTAATAGAGCGAATACTTGAAGCCTGGGACACAAATGAGAAGAAACAGTAAGTAACATGTTCT s bosTau2.chr29 3783109 148 - 45822729 TTCACTTTAAAATTTTGACACTTTGACATTTATGCCAATG------TTAACCTGAACATTCTTTTTTATTCAGCTCTTTCAAAAATGTCAGTTAATAGAACGAATACTTGATGCCTGGGAAATGAATGAGAAGAAACAGTAAGTATATTGTTTT a score=3320 s mm7.chr19_random 1608365 133 + 2598976 CACACATTCTAGAGATTACCCAGCAGGTATTACATTTTCCAGAAGGAGTTTTGTTGTTCTCTTTTA--GTGGCTCCTGAAAGGGATTTCTCCCTTTAAACAAATATCTCTTGAGTCTCTGCCCTGTTGGTTCcat s bosTau2.chr29 3784780 116 - 45822729 CAGACACTTTTGAGGCAAGCCTGTAAGCATTATGT-----------GGTTTT----TTCTTTTTTAAAGTGGCTCCTGAAAGAGTCT----CCTTTAAGTAAAGATCCCTTCAGTTTGTTCCCTCCTGTCTGCAT a score=3569 s mm7.chr19_random 1608541 382 + 2598976 atcGTTACTTTATAAAC------------------CATTGACATTAAAAATGTAGTCTTA--TATAAAGATGAGAGTATTGGGAGAAAGTAGACC---------AAAGCTCTGAGGCTGAGC-----TTACTGGTCACTGAGGGGTCT---CCAGAGAGTGCACGGGTGCTGCCTTTCTCACCTAAACAGGTTTTCAGATAAGCCACTGTT-------GAGAAATGTCATTAGT-------TATTTGTGTCTATCCATTAGCACAAGTAAAACTTGATATCTT----TCGAGGAAAGGGCCAACAAAATTCTAACCTCAGTTTTTTATAATA-----AGTCTGAAATTCAGAGtttttttttttttttttttttttttAAATGTAAAGGCAAACTC-------CAGTGCCCTGGGGCATTAATAAATGTTTGCTTT-----------AGATAGTATCTGA s bosTau2.chr29 3784928 427 - 45822729 ATTGACACTTTTTAAATATTCAGGTAGAGCAGTCACAGTGATGTGAGAA-----GTCCTAAGTGTAAAGATGGGTCACTTGTGA-AGAGCAGACTCTGGTGAGGGAATGGGTGAGGAGTAACACGCATGTCTGCTCCCAGTGGTGTATGGGCCAGA---TGCAAGGTGACCACCTTTC-CTCTTGGCCAAGTCCTCGAGTCAGCTAATGTTTTAACTCAAGAAATGCCATTAGTAGATAACTTTCTCTGGTAATTGATTAATATGATTGAAATTTAATATCCTGTCTTAGCAAAATGAACCAGTAGAATTCTCACCTCAGTTCTCTACAGTCTGTTTAGTCTGAAAAACAG-----------------------TTTTACAGAAAGAGAGAAAGTCACAGCCACAGCATCATCAGGTACCGGTGAATGTTCGTGTTTTTGTTTTTAAAGATAGTATGTGA a score=10890 s mm7.chr19_random 1609197 357 + 2598976 AGTGTGAATATTTATTGTTT--CTCTTGTCAGGGCTGAAGGAGGACGACGGCATGGTTACATGGGACACCTTACGAGGATAGCTAACTGTATTGTGCACAGCACTGACAAGGGTCCGAACAGTGCGTTAGTACAGCAGCTCATCAAAGGTAA--GTT---AGTTAACAACCTAATTACATGTGTGTAGGACCAGAGAACAGGTCAGGGGTTAAAGTGTTGGGAACAGGTTGCA-------------AGCTATAGATGGGGTTTGTTTTCATTTTAGAGACATTTTTTTGTTTGGAAATCTCATTGTAGCTCTTGAGACTATGTTTGAACCATGTGGTCCTCAGCTGTACTTCTGCTTAGATTTTTGCTGTTCATTTG s bosTau2.chr29 3785599 353 - 45822729 AGTCTGAACATCTGTCCTCTGCCCCCTGGCAGGGCCGAGGGAGGTCGGCGGCACGGCTACATGGGCCACCTGACGAGGATAGCCAACTGCATCGTGCACAGCGCGGAGAAGGGCCCCAGCAGCGCCTTGGTGCAGCAGCTCGTCAGAGGTAACGGCTCAGGGGTCGCAGCATCGTTTC-----TGTTGGATT---GGACAAGTTAAGGGT---AGTGTGGAG----GGCTTCATAGCTTTTTAAACAGCTGTCTAAGGAGCTTCCTTCTACTTCA---ACA-----TTATCTGGAGATTTGAATGAGACTCTTGAGAATGTGTTTGAACAACATAACTCTTTGCTGTA-TTCTGTTCTTAGTTCTTCAGTCCTTTTG a score=22964 s mm7.chr19_random 1610355 1714 + 2598976 TTGTCAATGTTACTAAAATGAA-------AGACTTGATCCTAAAGGATTCTTTTTCTACTAGCATTTAAATTTAATCAGCCCAGGGTGACTTG----------------GCCTTCTACACAAGC-CTTAGACCACAAGTCCATTTTGTCA-GAATGAGAATACCAAATGCTCTGACCTGCAGGATCTGACCCAGTGGGACTAACTAGTTCTGAGACA-----------------------------------------TCTTTGAATGTAAG--------AAACTA----------------------------ATAATCTTTGTTCAAGGATTGGTGCTCTGTCGAGTGCGCTGAAA--GCCTAATTCTCACCCAGTGACTGA-ATAACTGAGGCTGGTCCATCTGTAATTTTGCTTCTTGAGAAATACA--AGCCTCTTCTTGAAGCCACTCCTCGTGGTTCGTATCCTTATCAAGGAGAGAGGGCCAT-----GTATG-GTT----------AGGCTTGCTCCTTCGTGGAAGTTCCT------GTGTGAGTTTGTACCTGTGTATGGATGC--TTAAACCACAGTTGTCAGATGACCTCTCTGTATGTAGATAGGCTTCTGAGGTTTATAGGTAGGGAGGGTTTCATTTCTGAGAAAAACCATT-----------------AAAGTTTCTCTAGAAAGTTGAATTTTGCTGTAGAACATTTCTTCATGTTTTAT-TTATGAGGCAACTATGTAGGAGACATACAAGTTC----AATCAAAGCAGTCA-ACTGGGTTCTGTGGACCATTCATCGGTCCAGTGTCTGGTATAGGATCCCAGAAAAGTA--CAGAAGCTAGTATTTGTAAGGTTTCTTAAACTTGT---------------------------CCACACAGACCTCTTTCTGCAGAGT-----GGAGACAAA-AAGTCCATGTTTCC----------TTTCAGCAGAGCA----------GTTGTTA-------GTAATTGCTACATTGTGACTCTTGGCCAGATCAAGC-----CAACAGTGTTGGTGGGGT--GGGGCTGTTGG------TTGGGGCTCAAA---------AGTCTGTTGACTGGGCCTTTTTGGACTCGTTCTCTTGGACCACTGGGCAGGCCATAGCCAAGACTCCATTCAGCTCATTGG-AGTCCCCCAAGTACTATTCCTGTAGCTACTCTGAGACTGTGCACCCTTCCCCCACTGTGTTTA--ATCCTTTTTTCCTTTTT--CACTCTAAAGATCTTCCCGATGAAGTCAGGGAGCGGTGGGAGACGTTCTGCACGAACTCCTTAGGAGAGACGAACAAGAGGAACACGGTAGATCTAGTAGGTTTCAC-AGGTTCCATTTCTGGGGTTTTTGGTGCTCTCGGCCATTGCCTATTGACTT-GAAAAAGGTTAAAGAC----TATCCATTAGGCCCAGTGAATATGGGCTGAAGAA-AAGCTTGTGACTCTTTGCAGGAAGAG-GATAGTATTCACAGCATTCTTG---ATTTGTTCATTCACCTGCTTGTGACCTACCTTACATGGCGAAAAGGTACTAAAAAGCCACCCATGTCCACTGCAGTCCACATCAGTGCCGTGTCTGCCTGGGT-CCTGCTCCCTTTGCACCTCTGCC---TTCCTCTTGTTCTGT--------GGCTTTGTGCTTTGGGCTTCATGTCACTCTGAGTTCTTACAACCCC---AAATATTCCCATGGAT-GTTTCTAGTATTATAGAGTTCAGCTTATTCACATTTTAGAACACTTTTTGGAGAAGAGAGTTA--TAGATGACTCTGAAACTTGCAGCTTTAGAATGTTGAATTGAATTGATACTTTCAGCTAGGGAATAATGGCATTGATAA---TTTTTCAAA----ATTGGACTTTGGAATGTGTTTTTGTTTTCAAACACATTAAATTTTAAGATGAGTATTGCTTTATTTTAG s bosTau2.chr29 3786172 1888 - 45822729 TTCTCTCTATTACTAAAATGAGGGCTATTAGCCAATATCCTTAAAGACTCTTTCTGTACTAGCATTTGAATGTAATCAACCCGAGGTTCCTTGAAAAAGCTGTGCGGATGCCTTTCCCACTGGCTCCCTGGCCTTGACTCCGCCTCCTCCTGGATGAGAACATGAAGAACCCTG----------TGTGCCCCAGCGGGATTT-CTAGTCCTGTGACTCACTCCAGAGGCAAAATGTCTTAGCCTCGTGGTGCAGCATTTGTTCAGTTGTTAGCTTGCTGAAGACTAGCTCCCGGTCTCTCCTCCTCCTCTCAAGAACGTTTGTGTTCAGGAGGCTGTTGCCTATTGAATGTGCAGTAGTGGCACGATTGTGGCCCCGCGATGGAGAAAACTGGGGCTTGCCCACCTGGGATTTTGCTTCTTGAGAGAGAGATGAGCCATATCATCTCACTGCATGTCGTTAGCCGTACATTT--------GAATTGGCCATATCACGTATGTGTTCTTTTAGAGCAGTCTTAGT--TTTATGGTGGTTGCTTCCCAGATGTGGGTGTGAGCGTGTATGCACATACATTTAAACCAGAATTTTCTGACAGCAACTTCA-GTCTAGTGAGGGCTCCCAGATT-----GCAGCTGTAGTTTCATTTTCTCATAAAACTATTTGTGTCTCCTTTTCTTTAAATTTTCTGTATAG-GATGGATTTCACTGTTGCACATGTATCCGTTTGTTGTCTTATGACACAAGTATTTAGAAAACAT-TATCTTTGAGGAACTTAAGAACCCACACTGGATTC-----------CATGGGGCTAAATTCCCTCAGAATTTCTCAAGAAAGTGTGCAGGAGTCAACATGTGCAGTGTTTCCTGGACATGCGTGACCGTGGAGCAGGACCACTGTTAACCACAC------CTTTATAAGGAGTTCACTGGAAACATTTACATTAATATTTTCCAGGTTAAGTTTTTACCAAAAGATCCTAAAAATATAGTTAAATCCAGGTAACTG----GTTATGGCTCTTGGC---ATCAAGCATAGACCACAGGG---GCAGGGTAGGGGGTTCCTGAAAGTCCTCAGGGTTCAGACTGAGCACGGCTCTGTAACTTGAGCCTCCCAGGGCCCGGC------GCCCAGCCTGCAGGGCTTGCTCACCCTGGCAACCTGCACGGTGGCAGCCTCTCAGG----ATCCCTGTTTGT-CTGTGTGAAAGT------------CACTGTAGTGATCATGCGTTTTTCCTTTTCTCCCCTCTGAAGATCTTCCAGACGAAGTCAGGGAGCGATGGGAGACGTTCTGCACAAGCTCCTTAGGAGAAACGAACAAGAGGAACACGGTGGATCTAGTAGGTTCTACAAGATTACATTTCTGTGA-TCTCGGTGCTCTGGGACTTTGCCCGCTTATTCAGAAAGATGTGAGGCACCTCTCTTCCACTTTTCCTGGTGATGGTGGACCAAGGGGTACGTTCGTGTCTCTTATCAGTAAAAGAGGTTGCGTCCGCAGCGCTCTGGCTCATCTGTCCAGTCGGCTCCCAGTT-CCGGCCTGGGACGACGCAGGGG--ACATGCAGCC-CTCAGCCCCGCTTCCTGCCACACC---GCCTCACCTCCCTCGGCGCCTGCTCCCTGGGCTCCTCAGCTCAGCCCCAGCTGTCCCGTCACACTCGGGTTTGTTGCCTTACGCCT-GGGTAACTCCGGGTGGTTGGAGCACCAAAAAATATTCCTGTAACTGGTTTCTACTTCTGCTTAGTTGAGTTTACCCTCATTAAAG-TCATTCCCAGTTGGGGAAAGTTCTTTAGATGACTTTGGAACCC-CAGCTTTTAA---------CAGATTGGTACTCTGAGCCAGGGAACAATGGCATTGataatatttttttaaattatattGGACTTTGGAATGTAGTCTTT------AAGACATAAAGTTTTAAGGTAAGTATTGATTTGGTTTTG a score=3395 s mm7.chr19_random 1612143 391 + 2598976 TGTTCAGCA--CAAGTCACT----GTGGTTTCTTTTAAGAACACCTCAGTCATTACTAAATTATGTAGCAAATAAGAGCTGCAA------AGTCAGTAGGTTA-TCTATGTCACACTGCAC--AGGCCC--TTGTCTCCCAAT---------------TGACTTGAGTAGT-------------------AGAATAATGGCTTTCTAAAGGTGGTTTTGATAC----ATGATTAGGAAGTA----CGGCAAGA---AAAAAAAAATGACTATAG-AAGGGAGCTTTGTGTGGCCATGTGGTTACAGTAGGTCTGATGGCTCCAGT------ATGTGCCATTGCCTGTCTGACCAACCCACATTCCTGTCAACAGAGCTG-GCCAGCAAGGAAGGGC------ACTTTTTATAAATGT----TACATAGCTGTATGCTTTGGGCTTTCCTGTACTGGTC-AGTTGGTTATAAT s bosTau2.chr29 3788216 460 - 45822729 TGTTAGGCAGTCAAGTCCCTGGCAGCCTTATCTGCTCAGAA-----CAGAATTTAGAAAATGGGGGTGGGGGTAGGAGGTGCTACAGAGCAGTCCCTGGGTCACCCTGTGTCACATGGCCCCAAGGGCCTGTCGCCTCCCACTCTGTAGATCATCTCACAACTTTGGTTGTCTTTTAACAGATTCTTGACAGATTGGTGGCTTGTT-AAGGTGGGTATAGTGTGAGAATTATTAGGTACTAGAAGCTGAAAGAATTATGAAGAGGTAAATGTAGAAAGGGAACTGTGTGGGGCCATTTAATTAAAGCCGGTTTAGTGGCCCCTGTGTCTCAGTGTGTTATAGCCCAGCAGAGGAAGTGACATGCACTTTGACAGCCTTGTGCTATCAAGGAAGGGTTAAGTAAGTTTTAACAAATGTATTACCCACCGTAGAGTGTTTT---TTTTCCC---CCGGTCAAATTGGTTAAAAT a score=7584 s mm7.chr19_random 1617089 525 + 2598976 cagtatagagaactcttaagagaCTTCAGTAGAAGTGACTTTCAGAAATAGAACATTTCCTTCTAGAATTTTACTGATCGTTCA---TTGTTATATGTGCTAGCAGTAAGAACTATTATCAGTGCTGGGCTTGGTCGGTGCTTATATCAGTTGGC-----CATGAATGG--TGAGCAGTTCATGTTGGTAGGTTTTTTGTGTGTGTGTATGGGGGGGTGGGGTTTTTTTTTTTGTTGTTTGTTTTTTAAGTTATAGAGAGTAGACTACTTATTCTCTGTGGGGCAGGGA------------GGGCAGATTTTCAGAGGGTCTTTTATTGATCAGAAAACTGTTGAATGAG--CATTTGTGGCCA----GGCCAGTGCCTTTCTTGGTATAGGCAGGAAAGTTAAGAA--GGAAATAAAATGCTTACCTGTACGGTTGACCTTCCTTGTGGCTCATGAGTGATCCTTAGAGCAGT-GTTTTGCCCACAAGGCCTGATGCA--TACCTGCTGTTTTTGTTTCATCTGCACTTCACTGTTACTTCTGCCTTCCCCCTTCAA s bosTau2.chr29 3792728 526 - 45822729 CAGGACAGGTAGCTC---AGAAAATCCAGTGTAAGTTACCT-AAGAAGTACAGTGCTTGTTCTTAGAATTTTGCAGACTGTTCACATTTATTACTTGCTCT-GTAGCAATTACCAGTATTAGTGTGGTACTTAGTCA---TTTCTATTTGTTAATACATTTATGAATGAATTAATTAATTAATGAAAATCACTTATT-------GTGAATTGGTGAGCAG--TTCCTGTTTATGCT-TTTGTTTATTTAATTAATGTGAGTTAGTT--TTAAGTTGTTAGGGGCAGGGATTACGTGTTAAGGGGCAGAAGGTCTG-GGGTCTTGTAATGAGCAGAGGACTATTGACTCAAGTCATATTTAGCACTTACGAGCAGTGCTTTTCTTAGAATGAGTGAGAAGTGCAAGAATTAAAAATGAAATGGTTGTATTTAAACCTGAGCTTTTTAGTGGCTCATTAGTGATTGCTGGGACTGCAGTTTTACCCTTCAGGCTTGAAATAGTTAATTATT--TTATATTTTATCTGAGCC---------ATTCTTCCTTCGCTTTGTAA a score=18269 s mm7.chr19_random 1617685 524 + 2598976 TGGGTGGGTAGCCAGAGT-GGACTCTAGATTGACTGGGTGTGCTTGACCACTTAACTG---TTATTTCTGGgtttgttgttagtttttttgtttgtttgtttgtattttggttttgggtttttttggtttgtttgttttattttggtttttttgtttgtttTTAGTATA---TTGAAACAAAAGCTGAATGTGATAATTTATTCCATTAAAAATGCTAATGCAAATGTCCAACACTTTTCAATGTTAAATAGTTTTTTACATTTTTATGCATATAGGTTACAACCTGCCATATTCATTCATCCAGTGATGATGAAATTGACTTTAAAGACACGGGTTTCTCACAGGATTCCTCTTTACAGCAAGTGAGTCACACCTAAA-GCTTTGCTATTTGTTTTTATCTTAAATGCTTAGTTTAGCTGCCCCTTG-GGATCAGC------ATCTGTCAC-TATTAGAATGTGGTTTGGGTTTGCT-ACCAATTAGG-CAAAATGATTGGAACAGAGAGGTCTGGGACCTTGCCAGGTAGGCTGATACTG s bosTau2.chr29 3793333 498 - 45822729 TGGTAAGGTAGCTGCAGTTGGGCAGTGGAA-GGCTAGGCG-GCTGAACCTCCTGATTGAAGTGCTCCCTGGAATTATTG------------------------------GGT---GGATTTTACAGCTTAGCTC---TTACTT--GTTTTTGTTCATGCTATTGTTACACATTTGAGAGAAAAACTAAATGTGAT--TTTTTTTCCGTAAAAATGCTGATACAAATGTCCAAAATTTTTCTCTCTTAAATAGTTTTTTACATTTTTATGCATATAGGTTACAACCTGCCATATTCATTCATCCAGTGATGATGAAATTGACTTTAAAGAAACGGGTTTCTCACAGGATTCTTCTTTGCAGCAAGTGAGTCATGCCTAAAAGTTTTGTTTTTTGTTTTTATTTTAAATGCTTAGTTTAGTTGTCATTTATGAATCAGCTTTGGAGTCAGACATGCATTAGGGTGT--TTGGGGGCTACTTACTAGTTAGATCAAAGTGTTTATAAAAGGAAGTGTTGGGTATGTGAGAGAAAGGTGTATGTTG a score=3546 s mm7.chr19_random 1618482 572 + 2598976 TCCTGCCCCCAAATTGATCAACTCCATGTATTGACTGCATTTTTATCCTTTTAACAACAGCAAAAAAAAAAAAGATCAGTATCAATA--CATACTGATTTATCATTCTTTAGTCATTCTTGGAAAACTGATGGTTGAATTTA-TATTTCTACTGGAGGTTGAGTTTGAGAGTTCAGAATAGAAGC---------AGATGTCTCCTGTTCATGAGGGAAAGCTGTCCTTAGCT--------GTCTGGTCCAGCA------TTGGTGTGACAGTGGGATTAAGGAAACATTGCTACACTATATACTGATGGTGCTTGGCTTCTTTCTGA---CTCTCAGTCGCAGTGGGGTCATTGTGAAGCTTCTGATTTTCTTGTGTGGT-TGTTTTTTGCT-TGCAAGTTGCATG------CCCATCATTACTT---CTAGACAGTTGCTTGCTCTTGATGCTGAGACC-TTTAG------CCTTTCTCAGATGGATTTGAAGTAAAAGTTTATAGTACTTCCTGGTTTCCTTCTGGGTTTGGTTTTTGGTTTTTGGTTTGTTTTGTTTTTCTTTTTGACACTAGCTTCTTTTGGCAGCCATTCTCCTAAATTTAGAGTTAGGGAGCA s bosTau2.chr29 3794089 546 - 45822729 TCCTGTCCCCAAATT---CCTCTTCATTTATCAGGT-CCTGGTAATCTGTGTGGGGGCATAAAACAGGATATAGA--------AACAGGCGTACTGATATATCCTCCCTTGGTAGTTCCTGCGGAGGTGAGGAATGAATTCACTGTGCCTTCTGGGTATCAGGTTTGGGAGCTCAACCTGGAAGCCCTTTTGGGAGGTACTAGCTCCTCATATGGAGAAGCTGCCCTTGGTCAGGACCAAGTCTTGCCTGTCAGGTGATTTGGTGTGGCAGTGGAATTAATGTGG--TTACCTTCCCTGGCACTGA--ATGTTTTTCCCAGTCCTGAAGCCCCTTTTTC----CAGGGCCAGGATGAAGTTTCTGATGACTCTGCAGGCCCTGCCTTTTGGTGTCCAAGTAGACAGACACACCCCAGGATAGGCTGAACTAG-CAGTCGTCTGATTTTAGGACTAAGGCAGTTTAATGTGTACATGTTCAGGATGGGCCTGAGGTAGCA-------------------------------------------TTTTGGTTTCTCTTG-----ATTCTTGGCACTG----CCCCTGGAGACTGGCTTCCCGAGGTGAGGGGCGGGGTGCA a score=450 s mm7.chr19_random 1619304 908 + 2598976 ATAGTATTAAAATAGTACTAAGAAAAAAGATGCCTGGACCAATGAAGTGGCTTGGCCATTGAGATGCTGCTGAACCCACGGGTCTGACTTTGAGCCTAGAACCCACACATAGTAGAAAGAGAGAATTAAACTGACTTGCACACATACACAAAATGAATGTAATTtagatagatagatagatagatagatagatagatggatagatggatggttagatagGAAGGATGCTTTTAACATCTTCCTGACCATGTTGGTAAGCTGTCACACATGCCTTCTTCCCACCCCTGTAAATCAAACTGAAGACTTTGTAGATGCCTAAACTTACAGCTACTGATGTAATCTAGAAG-TTATTTTTAGGCATCTAGAAAGTGCATTGCCTTGCTT-------AGTCCTGGTTCTAGAGTCATG-----TCTGGGGTGTTTTCTC----------------TCTTATTCAATCCAGTCTACAAAGCTGTCATCCTGAGACAGCCCAGGCT--------TAGGGGCTTCATCCATCACATGTGACCTCCATATGTATGGAGTAATTACTAGTCACTCTTTTCTGACTGACAGGCTTACAGTAGCTCTATTTTACATAGTTACACTGTGAACTAATTATG------TTTTAAAATG---AATCTGATCCAAAACATTTTC--CTGGAGAAAGAGGGTCA-----AGGTTATCCTAACAGTTTCATCCTGGTCTCCACTGTTAGC--CCAGTGTCAGTTTGTAACTTGTAACGGGTTAAAGCTCTCATTCCTGTTTGAAGTTAGGCTTCC-TACTCAGAGCCCAAGTGTGCAGAGTGAGGAGAGTTAGTAACATGGTAACCCTGCCGGGGATGTGGCCTGAGCAGTGAGCCAGTGCC-TTGTGACAGATGTGCCTCTGGCCATTATGTTCTGCTCTAGTACTTTCTGCTTTCCTAGCATCTCCTAGACTGTGGAAGGAA s bosTau2.chr29 3794790 743 - 45822729 ATAGTATCAAACTGGTCC--------------CCTCAACC------------------------TGCT-CTGAACCCC----------------------AATTACACATCGT-----------------------TCCGCCTCTACAGAGAA-------------------------------------------------GCTGAATGGT---GTGCAGTGTGCGTTTTCAAGGTCACTCTGATTCTGGTGAATAGCTTTTAAGAAAGAGAACGCCCTGTTCTTGCAAATATTTGCAAATAAGTTAATGAACTCGGAGTTTGCGGTAGCTAGTTTAATCAAGCTGATGATGTTCTGGTGTCTGGAAAGTGAATTCCCTGTCTCTCTCTCGAGATCCAGTTCCAGGGTCATAGATTTTCTGGGAAGAATTTTCAGACTGATAATGTGTGTATGAACCAATCTCAGTCACCAAAATGCCTTAGTGACAC----CAGGCTCCTGTTCCTGTGGATTTTATCTGCATTATGTAACCCTCAAAAGTAGGGAG-----AATAATGATTATTTTTTGATTGACAGCCTTCCAGTAAACTTTTTTTGCATATTGAAATTATAGACCAGTCTTGAATCGTTTTGAAAATAGGAAACATACGCTAAAGCATTTTTTTCTGAGTTCAGGAGTTCGCATCTAGGTTAACCTAGAACATTCATGCTGG-CTCCATTATAACCGGATAGTTTCTGTCTGTCACTT----------------------------TGGTGAGAAGCTTGCGCACAGAGAGCTCAGG-------------GCGCGCCAATGA----GCAAACCTGCTC----------------------CCAGCCCCGCTGCCACTCCTGGTTCCCTCGCCGCTGCTGTCTGCTCT------CCCTCCTCCCGCGGCCGCCCCT---CTAGGGAAGGGG a score=5196 s mm7.chr19_random 1620401 846 + 2598976 CCTTAATATTACTACAGCCATGTGTGTTGCTTTCTAGGTTGAGA------------CATATGATTTTGGCAACACTTT---GCTTATAGAGTATGACAGCTCTTCAT---TTTGGGCATACTG-GCTTCCATA----CATTAATAGAAAGCAGATACAAGCAGGAAATTCATTGCTACTTTTATCTTCCCAGGCACTATGCCAGACTGAGAACTGATGAGGGCT--------CTCTGATCCCAGTTTCTGTCAGTTGCTGTA-----GCTTTGTCTAGATGTATA---GGGTTGATAAATAAA-AGTACA----TGTGTATACACATGAACATATCtgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatACATTTGCATTA-------TATTTGC---TGGTTGTGAA---------------CTTCAGACAATGTTTCTTTCTTTTCATATCCAAAGAATT----GTATTATAAACAGAA---TGAAAAGTTTGAGGAAAGCCTGTGTCTATAAAA-------CAGAGCTTCTGGGAGGGA--ATTTCACCTTGTTCTGTGAGATGTCTAGTCTAGATAAATCTACAGTCTGTCTTGCGTTGATTGCTCAGCAGAATGGCCCCACAGGTCTTTTACACACCCTGATAGTA-------------------------AGCTATATCAGGGTCAGAGGAGCTGATTTCAGGTTTTTG---ATGATGTGGCTGTGAAGGCTGCCTGCCTGAGTCCCATCTATTCACCCAGAGT--GCTCTGTCACCTACAACTTTTGTCTTCCCTTCTGCTCTAACCAACCTCCCATG--CCTGCTTCGGTTGTGCTCCAGACCCTACCCACACTCACTGTCCTCACACATCCATGAA---CTCATGTCAGGCCATCTTTGTGATTGAGCCTAGTAGGAAG--TGATGTCTTGCTTGAGAGCAGTGAGT s bosTau2.chr29 3795696 910 - 45822729 TTTTAATAATTGTACAACCATATGG--CACTTTCCAGACTTGAATTTCTCAGAGTCCAAAGCACTTTCATAAAGCTTTAGGGAGAATACAGTA--ACAG-TCTTCACAGCTGTGGGTTTAGTAAGCCTTGACAGCTTTATTAGTAAAAATCAGATTTGAAGCCTAGGTTCGTTGCTG-GTGTGTCTTCTTAGAAGCAACAGTGGACCCAGAACTATGGAGGGCTGCGGCTTGCTGGTTTCCCGTGTCCTCTGGGTTACTGTGTGGAGGCTGTGTCTGTCTTCCTCCTTAGGTGGATAGACAGACAGTGCAAatatgtgtgtgcatatttacgtgtatctgtttatacagctatatgttcatacatgtatgcattcacacatgtttttgtaATACACGTAGTATTTGCATTCTGTTGTGAAGCATTTAAAGGCGCACTCTTGGGAATATTTCTTCCTTTTTATACCCAAAAGGTTTACAGTATTATCTGTAGAAGTACAAAATTTTTAAAGAAAA---------AAAAAAAAGGAACCAAAACAATTGCAAAGGAGCATTTCCCCTTGTGTGACCACATTTTTA---TCAGTGAACTCAGAGCCCAATTTACACCGCTTGCTCGGGAGAATGACTTTGTGATCGTTTGTTGCACTTTGACGTTACCGACCGTGTGTCCTACCTTCTAGGAGATAAAAC-GATTCAGACAAATTGGTTTC---TTTCTACGCATAATGTT-----------------------TCATATTCGTACATCCAGAACTCGCCCAGCCTCTTAGGGCTTGT-CCTTGCCCTGTGCTCGCACCAGACTCCCAGAGCCTTGCTTTG--------CCTTACCGTGCGCACAC-CAGGGGCCTGCCCCAGCCCTTAGGTGCTCAGGCAGTGTCGTCTCTGGGCAGGAA---AGGGGGCAGCTTGAAGGTGTGACAGTGAGCAGGGAGT a score=5872 s mm7.chr19_random 1621305 183 + 2598976 TCACGCCTAAGCAAATG-TAATTTCCAAAGCCAAACATGAAGTTTATTTTTAAATT-CACACAGTTTGGATTATCCATGCCATAATTCCCTGCTATGAGAGTTAGTGTGGTGAAGGTGCATGACAGAGGTATTCCTGCAGTGCAGGGCTGGGGCTGTAGGCTTTGAGGAGGTGGGGACCAAGAAG s bosTau2.chr29 3796674 179 - 45822729 TTAGATCTAAGGAAAAGATGCCTTCCAAAGCCAAATATAAGGTTTATTTTTTAATTATCCACAATTTGGATTATCCATGCCATAATTCCCTGCCACCATAATGAAT-CATCAGGAATTAACGGCAGAGGCATTTCTGCAG-----GGTGGAATCCGTGGGCCCTGCTCAAAGGAGAACGCAGGAG a score=28537 s mm7.chr19_random 1621519 1068 + 2598976 CAGACAGTGGCCTCA-----AAAGCCCCCATT--AGTAAGTGCTGTTCCTAGGGTCCCACTGCTGTCTCTGTC---CTTGGCCACATGTAATATTCACA---GCGTGGTCCTGTGCTCTATATTCATTGTCTCGGTGAGAGTGAGGACGTGAGGTGGCACTTGAT-------GTCTTTGTAGC---------------GAGGGCATGTTT----------------------CCTGATGCCGT----AAGTAGACTGGCAGCAGTTCAGTAGGTCCCATATAACATTCCTGTATTTTCCAACTGGGAAGA---------CTCACCCAAGAC--TGATGGAAATAGAATTGGCCTCTCTGTAGACCTTCCAGTGTCCCGGGTTTTTCTGAGTGATTTCTGAGGAG-GTTAAAGCTTCCTGCTCTATCTCTCAGGTAGGTTGTGCAGAAGTCTCTCAG-ACGGTTCTCAGCCTCCAAGACTTAGGCCAGCATTTCATTT------------------------------------GCAGGATCATGATGATGTCCATCAGTCTTTCTTTCTCTGATGCTACTTTTGCTATGGTGGATGGGCATGGGGAAATGGTGGGGGCTAGGGGGAGGGTGGGAAGTTGGGGGTGGTTAGCACATTATATTTTAGGATACTGTTGGTTGTGTCTGGAGATGAT-GAGACTTCTGATAATTTCAGACT--TACATGTCTCTT-ACCTCTTCACACTAAGGCTAACTCAGTTCTCTGTCCAAAGAC----TATAGTAGTCGGCACTTTTTACAGTATGATCTCTTGAATATTTCTTA---ACAATGTATAGTGGAGCAGTTTGTGTGTCATATTTCAAAAATCCCCCCCTTTGGGGTAAA--ATGTCTGAAATTATTTGATTTTTCTTTTTCTAAAGAAAAACACACCAACCTTTAAAGTTCCATGGCTG--TGTGAGTTAAAGTGGTTTTCTGGAACACAAATGGGCAAATAGTGTATAGAATGTCATTAGAATCATGATGTCACTGTCACTGGTCCTGGGGTTGCCAGGCCTTTTCTGATTATCAGATGCAACAAATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGATGAGAAGTTTGCAGACCAAGACGACATTGGCAAGTGAGTATATTTTAATATTTCCTTAATGACTTCCCCC s bosTau2.chr29 3796868 1128 - 45822729 CTGGCAGGGGCCTCAGGGCCAATGCCTTTAGTCCAGCCACAGCTGTTGCTTGAACCCCCACACAGTCATGGGCAGCTCTGTCCACGTGCAGCGCACACGCACACACGG--CTCATCTCCGTATGGGCTGCTTGCAGCAGAGTGAGGA--------GGCGCTTGCTTGTCTTGGTCTCTTTAACCCTGACTGACGAGCCTGGAGCACATTTGCTGACTGCACCGTCCCCCTGGCCTGCTGCAGTTCACAGTTAGAACAGCAGCATCTGCGGAGTCC----ATAGCATTCCCCCTTCTTC------AGGAGAGCCCTGGTGCTCTGTAGAAACGGTGTAGCAAACAGAGCTGACTCCTCCGTGGATCTCTCAGTGTTGTGGGTTTTTCAGAGTGATTTCTGATCAGTGTTTAAACTTTCTATCCTCTCTGTAAGGTAGGTAGGCTAGTAGTTACTTTGTACTCTTCTTAGCCTCTGAGACTTAAttttttttttttttttttttAAGAAAATGAAGCGTCCCTGGAGCTGGTGTGGTAGAACTGGGATTGTGCTCACTAGTCGTTTTTCCTCTGTTGCCA-TGTTGCTGTAGTGGACGGG-GTGGGGAGATGCGG------AAAGGGAGGGTGGGTGGTTACCGCTTGTTGG--------GTTTTAAG-----GTTGGCTGTGTTCAGAGGTGACCGATACACCTTATAATTTCAGACTGTCACATGTCACTTGATCACTTTAT--TGAACCAGACCCAAACCTCTCTCTCAAGACATTTCAGAATAGAGGACAGTGGTCA------------TTTAACACTTCTTACGTGGCATGTGCATTAGAATAATTTGTGGACAAAATTCCAAACATTTCCTT-TTTGGGGTAAATTGTGTCTGaaattatta---ttatttttttttaaaGAA---CACACCAACTTTTTAAGCCCTATGGCTACATATAAATAAGGGCGGTT--CTGGAAAATAAATGGGCATATAGTATGTAGAATGTCATTAGAATCATTGTATCACTGTCACTGGTCCTGGGGTTGCCAGGCCTTTTCTGATTATCAGATGCAACAAATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGATGAGAAGTTTGCAGATCAAGATGACATTGGCAAGTGAGTACGCTCT-CTGTGTCCTCCACTCCTGCCCTC a score=8387 s mm7.chr19_random 1623649 1238 + 2598976 cacacacagacacacacacaGACCCTCATCCCTACCCCATCTCCTCTTGACATCTTGGATTTTTCCCATCTGGACTC--TAGTT-----TTACTAGTTCAGAATTGACATTCTCTTTTAGAAC-------AAATGCTTAGCCTGATAACTGGTTAGAATGGAGCTTTGATGATTAATAACATTGTCCCACC-ATTTATAAT---CATGTAG-----------CTCATCATGGCTGCTTTTA-CCCATCCCTGTCATGCTTTCAAGGAGGCAGGATGGCAGGATTGCCTGTGTGTTTCATGTACGAATCGGTCC--------------TAGTACCTAACAATGCTTTTGTGC--TTTTTCATGTTTGGACTTGATTGTT---TGGAAGC--TTTTTTCTTGGTTTTGTTGATGTGATCCTTGCAACCATAATT---AGCACAGAAGTTAGAAATGTGTTGTT-GAAAGGCTGTCACGGCCTCAAAGCATCATCTCCACTGCTCCCATCTCAACTCTTCCCTGTATCCACTCTTTAGTACCAGGGAGG--GCACCATTGAATACAGCACGGAGGGTTTGTGCATTACTCACCGAGAGTGCATTGATAATAGAAATACTTGAAATTTTGAGGATTTCA-GAGCACTGTTTATAGCCACCTATGGATGACAACAATTCTTCTTATGTTTTCTTTATAGTGTTTCTTTTGATCGGGTGTCAGATATCAACTTTACTCTCAATACAAATGAAAGTGTAAGTATAAACGCTTTCTGTTGTGCTCTGCCACTGGAGAAGTGGAGAAttgtgttgtgttgtgttgtgtgttgtgttgtgttgtgAAAGTGTGAGTATAAACGCTTTCTGTCGTGCTGTGCCTCTGGAGAAGTGGAGAATTGTGCTGAGTGTTGCCGGAGGCTGCAGATGGTTGTCCCGAGCTGTAGGCTCTTTTGCCCTATGGGATCCCACATCCCAGTTATCCTAATGAGTATCATCACATTATGTCTGCCTGGACCTGCAAGTAGG--AGTTTGCAACCTTGGCT---AATAGGACCCTGCCACTGTGATTGTACCACAGACATTTGGCCT-------------TGGTTTCTCATCT-----CTGTTGCAT-----GAA-------AAGAACATAACTTGGGTCA----ATATCAAGCTCTC--TGCCAGG----CTTCTCTTACAAA----CAAGACATTTGTGGCATTTTAATGGGGCCG-TTCTGATTTTAGGTTGAATATCATGAGAATCTACT--TTTACTTGCTGTT--GGTGAG--GTAGAATAACTCGTCAGGTTATAGCAGCTCTTTATGACTTCCTGGGCTGGTAACAG s bosTau2.chr29 3799066 1172 - 45822729 CACTCACAGCAGAGCCTGCAGCCCCCAGCCCCCACCTC-CCAACGTGTGTTGTCTCAGCACCTGCTTGTCTGGGCCCATTTGTTAAGAGTTGCTGGTTTGGAATC--CAGTCTCTTT-AGAATTTGTATGGGATACTTGGAATGATGTTTGATTCAAACAGATCTTAAAGGATTC-TAAGATAGCCCTACCTACTCAAAAATTACACATAAGGCTAGGAATTCTTTTAATCCCTGTTTTTGTCCCATCTGTGCCATATT----ATAGTGTAAGACTTCAAGGGTG--TGTGTATTTTATGTATGCATTTGTCTATCTGGAGAAAGCTCAGGGTCTGACAGTGTCTGTGACCCTTTTTTCATATTTCAACCTGTTTGTTATCTGCAAATAACCTTTTTGGGGTTATGCAAGCATGGTCTATAGAACCATGGTTTCTACCATGGCTGTTAAACATCGTTTATAAGGAAGGCTTTCA-GGCCTC---------------------CCATC-----------CTGTGTAAATTCCTTATACCGAGGGAGGAGGGATCACTTAATGTAA-----ATAATTTG-GTTTTACTAATGGAGATTT---------TTGTCATACTGTAAATTTGAATGATTTCATGAGTACTCTTTCTGA--GTCTGTAGAT---AACTGTTGCACTCCTCTTTTGTTTCCAGTGTTTCCTTTGATCGGGTGTCAGACATCAACTTTACTCTTAATACAAATGAAAGTGTAAGTAT-------TCATGCTGATCTCAAGTAGCGAGGCACACGAGAGGTCAGTTG---------------------------------------------------------------------------GTGGGAATGGGTGCTGTGTGC-GCCGGGGC-------------TCCCGA-CTCGAGGAGCCTTTGTCTTAG----------ATGGCGGTGACTTTAGCCA-------CGCACGTGGCCTGCCTAGCCCCATAGGCATGTAAATTTGCTGCCCTTGTTTAAGATGTGACAGGGCTA--ATGAAGCCAGTGTAGACATTTGGCTTCAAAGACAGCAGTTTGACTCCAACCTGCTGCCTGTTGCATCTGCTGAATGTCACCAGGAGAGAAACTTGGGCCAGATGAGGGCCAGCCCCTAATGCCAAGTCAGCCACATCTACAGATGGACATGGGGTTAGTGTCATTTGAATGGGCACGATGTTGATTTCATGTCACTTAGCATGAGAGACCACTGGTTTGTTTGCTGTTCTGATAAGACGGAGACTAAGTGATTGGATGTTGACACTCCTCACTGCGTAGCTGGTCTTGTAAGAG a score=14354 s mm7.chr19_random 1625006 361 + 2598976 TCATGCTAAATCCAATCTTTCTCAGGAATTTTTTGTT---ACTTACACAGAAGCTAACATTTTATTTTTATGTTTATGCTTGATTTGGGCATATGTAATAGGTACCATTTTTTG---AAAAGCAAATATAAAAACACAATTTTCCCTGGTAATTTGGGAGAGAAAACAGTTCTGACTTCAGTTGTATTTTTCTCTTTTCTTTACTTTTTTTCTGTAGGGAAATATTGCCCTGTTTGAAGCATGTTGTAAAGAACGGATACAACAATTTGATGATGGCGGCTCTGATGAAGAGGATATCTGGGAGGAGAAGCACATTGCATTTACTCCCGAATCCCAGAGGAGGTCCAGGTGAGCCACGGCTTGCCAT s bosTau2.chr29 3800383 345 - 45822729 TAATTTTGAAGCCAGTCCTTGGGGGGGCCTTTTTGTTGTTACTTACATAGAAACTGAC------TTTACATGCTTATATTTTACTTTGGTATAGGTGATAGGCATTTTTTTTTTTTCCAAACGACATGGAAGAATATGATTTACATTGGTAACTTTTGC-AGAAAATAACTTGATTTTTAAATATTTTTTCCTCTCATTT---------------AGGGAAATATTGCTTTGTTTGAAGCATGTTGTAAGGAAAGAATACAACAATTTGATGATGGTGGCTCTGATGAGGAAGATATATGGGAAGAAAAGCATATTGCATTTACACCAGAATCCCAAAGACGATCAAGGTGAGAGATAGCTTGTTAT a score=11423 s mm7.chr19_random 1626429 411 + 2598976 CAGTCATAGGCGAACATGGTCCAATTGAAGAGCAGT---GTGCTTTTACACTGTAGGTGATCTTTAAAGTTTTCTGGACACGGCTGGTCTCTGATGAAACAGCCTTAAAAATTGCAGTGTTGTTTTATAGCTCTGGCAGTACGGACAGTGAAGAAAGTACAGACTCTGAAGAAGAAGATGGGGCCAAACAAGACCTGTTTGAGTCCAGCAGTGCAAACACAGAGGACAAAATGGAGGTGGATCTGAATGAGCGTGAGTCACCCTGTCCTTATGAGTTAGTTCTAGTGCTTGAAATTGCCTGTTCCTGAAACTTGTAAACAGAGTGGCCTGTGGCATCTGAGATGGCCTCTGAGGCACAGTTGACCTAAAAGCACTGTTGCCACACCATGTGACTT-CCTTGTAGGTTTGCAATTC s bosTau2.chr29 3806470 372 - 45822729 CAGTGACAGGCACGTGGGACCCAGGTGAAGCGCAGCACAGTGTTTTTGTGTGGGATGTCTTTTTGAA----CCTTGGATTTAGCTGGGGGCCGATGTG-CAGCAGTAATATTTTGGACTTTTCTCCTTAGCTCGGGGagtacagacagtgaggaaagtacagactctgaggaaGAAGATGGAGCAAAACAAGACTTGTTTGAATCCAGCACTGCCAACACGGAGGACAAAATGGAGGTAGACCTGAGCGAACGTAAGTCGCCA---CCTTCTCTGTCAGCGCT-GTGTGTGGA----------------------------GGTGGCCC-CAGAACCTGGGACAGCCTCTGAAGGGTAGTTAA-GTGGGAGCAC----ACGGTGTCATTTGAGTTCCCTTGGAGGTTTACGTCTC a score=2562 s mm7.chr19_random 1628608 49 + 2598976 ACAGACTGGTCCAAGAACTTTGCATATGGTAAGCAGGAAAAATAACCGT s bosTau2.chr29 3808811 49 - 45822729 ATGGAGTGAGTCCAGAACTTTGCATATGGTGGGCAGCAGAAATACCTGT a score=15282 s mm7.chr19_random 1628941 718 + 2598976 CCACCACAC-TCAGCCTCAGAAAGAGTCACTTGTTAAACTCAAGGGCTAAAG---GCTCCAAATGATAAATGCTCCCCTCATTTCAGCACCCACCTGGTCAGCCAACTTTGACGTCCCAATGGAAACCACCCATGGTGCTCCCTTAGACTCCGTGGGATCCGATGTCTGGAGCACAGAGGAGCCAATGCCAACTAAAGAGACAGGCTGGGCTTCCTTTTCAGAGTTCACATCCTCCCTGAGGTGAGCAGTTGTGT-GTTTTCTTAATGTCTGCAGAGGGAGGCAGGAAGT---GCATGTGCC---TTGGCT-CAGC-TCTGAGGAACGACTGAGACTGAGCAGAGGGTTGGGCCACACTGACCCAGCTGAGCGCCAC-----AGCAAAACCGGAAGCTGCCCTGGGAAGATGGCTCCAGGGTGCTTAAGCAGGAGAGAAGGGAAGATGATACCTGGAGAGCTGTGGAGCT--TCAAATGCTCCACGGGTGGATTGAGGGGAGTAAGA---GTGGGTGCCTGACCAGCCCTTGTG-GGAGGGCACAGCTATAAGGCCGAGTCTGACTT---TGCTGTGGATG----TGAGCTTGTATTTCACTTGCCACC-ATCTAGTGCTATAGA-------------GTGCCAACAGATCACTGTCGTTGCCGGTCCTGGTGTTTGTTTTA--CTCAGTCACAGAGACC--TTATTTCAGAATTTTCCTGAATAGCTTTGTCAGCATTTGAATACTAAGTGAGGATTTCATGTTTC s bosTau2.chr29 3810903 741 - 45822729 CCACTGCACATCTGGTTTTGAAAAATGCTTGTGTTACATTAAATTACTGAAGCATTCTCAAAGTGG-AATTCCTCCCCT--TTTTAGCACCCAACTGGTCAGCCAACTTTGATGTCCCCATGGAGACGACGCACGGTGCTCCCTTAGACTCCGTGGGGTCTGACGTCTGGAGCACGGAGGAGCCTATGCCGACGAAGGAGACAGGCTGGGCTTCTTTCTCAGAGTTCACGTCTTCCCTGAGGTGAGTGCGTGCGCGGCTCTCCCATCCTTCCCACCTGAGGACCGGGCGTGAGGCATGTTCCCAGTTGAATACAGTGCCTTAAACAAGATTGAAA--AATCAACGGGGGGG---ATGTAGACACAGCTCTGAGTTACGAGGAAGCACCACCCTCTTCCTCCCTGCT----CTCCTCCTGGGTG----AGCTGGGAGGAGGAGTGGATGATAA--AGTGGGTTGAGGAGATGGCCCAGGGAGTCAGGGGCAGAGTGCTGACGGTGGAGCCCGGGAGTTCCTGAGGGGCACCTCCGTGGAGAGCGTTATGGAGACACTGCGTGTACCTTGCATTTAATAGATGATACTGAACGTACATTCCGCTTGGAGCTAATCTAGTACTGTAAATTTAGGGGTAGGTGTGTCA-------GATGTGACTGTCAGTCTTGTTAATTACATTAGTCTGAGCAACAGCAACTGATCATTTTGTAGTTTTCCTGAATGATATTGTCAGC-TTTGAGTATTAACCATGGATTTCATGTCTC a score=9568 s mm7.chr19_random 1629681 155 + 2598976 TCACACTGCTGACATCTGATTTTTCTCTTTTCTGAAAGCACAAAGGAGTCTTTAAGGAGTAATTCGCCTGTGGAAATGGAAACCAGCACTGAATCCGTGGACCCCTTGACACCTGGTGCAGCTGCCTTGGCCACTCAGCCAGAGGGTGAGTGCAG s bosTau2.chr29 3812445 155 - 45822729 TCCCACTGCTCACCTCTGAATTTTCTCTTTTCTAAAAGTACGAAAGATGCTTTAAGGAGTAATTCCCCAGTGGAGATGGAAACCAGCTCTGAGCCGATGGACCCTCTGACGCCCAGTGTGGCTGCGCTGGCCGTTCAGCCGGAAGGTGGGTCCAG a score=17398 s mm7.chr19_random 1631585 369 + 2598976 TGGTAAATGTGACTGTCATCCACTGTGTGCACTTT-CAGCACCAGGCAGTATGGCCATGGAAGCCAGCTCAGATGGGGAAGAGGATGCTGAGAGTACAGACAAGGTAACTGAGACCGTGATGAATGGCGGCATGAAGGAAACACTCAGCCTCACTGTAGACGCCAAGACAGAGACTGCAGTCTTCAAAAGGTAACCAGAGCCTGGGACTCCTACAGTGACAGCTTGTCGGGAGGA-AATGGGGAAGAAAC--CCAACATGAACATGTTTA----GATTCAACTGAGTACTCATAGGCTAACTTGTTATCTTTCTAATATCTCCATTAA----------TGTTAACCGAGAGATGGAGAGTTTGGACCCCTAAA-----GTGCATTTTTCCTT s bosTau2.chr29 3814063 387 - 45822729 TGATGCACGTGAC---CATCAGCTGTGTGTTCTTTTCAGCGCCAGGCAGTGTGGCCATGGAAGCCAGCTCCGACGGCGAGGAGGATGCGGAAAGTACAGACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAGGAAACTCTCAGCCTCACTGTAGATGCCAAGACAGAAACTGCGGTCTTCAAAAGGTAACCAGGCTCGGTCATACTGGCAGCTTCAGGTTGTCGGGAGGGTGGTGGAGGAGAAGCCACAAATACTAACATCTGTAATTTGGTTGCAGTGTGGATTCAGACATTAGCCTGACATTGTTCTATTATTTCCATTAAATTTATTAAGTCTTAACAAAGAGATG--GAGTTTGGCTCTCTCGGTGTCTGTGCCCTTCCCCTT a score=2781 s mm7.chr19_random 1632085 182 + 2598976 ACAGACTGAATTCTGTAACTGTAATGCAGTCATTGGAATTCAGCAGCAGTGGAATACTGCTAAC--ACCAGACTTGATTTGAAAATAGCAGGCTCAGCTCTCCAACTCATGGGATAGAAAAACAATCAGAATGAAAATTTAAATCTGGAAACTGTAGAGGGTAACAGAAACACTTCCATCAAGA s bosTau2.chr29 3814597 171 - 45822729 acagatcatttcctccagatacaatgcagccagcagaattca-------tgacagaatgatagcttacaaaaacatatttggaaattac---cctcacttgtaaacttatgtgtcaaaaaaggaatcataatgcaaattaaaagc--aaagctg-aaaaactagtgaaaaaggttctaccaaaa a score=30547 s mm7.chr19_random 1636238 997 + 2598976 CTGCTGCTCCTGCTCTTGGCTCCTTGACCCTTCCTAGTGCCTGTTCTTGTCATGTGCTGCTAGAGAGCAGC---AGAAGGCTTTCACCTGGCTTAGCAG--TGGGTATCTCTTGCCAGGAGC-------ACGTGCGAGTGGTGGGCTTGGCCTTAAGCGCACGG--TAGAACTAAAGGCTCCTGTTCCTTCAAACAGGTTCTCTTCACACCTCCACCGACTCTGCGGGGTGCC--ATGTGCAGTCGTGGACATG----TTTCCCCAATTCCTCATTTCTAGGAGTGTTCTGAAACTCTTGTACGTTTCTTTTTCTGTTTTGCACACTTGGCCTCAGAGTGTTGAAGTCCTACCGGTATGTACGGTGACAC-GGGCCGCTCTTTCTCAGACACCAGCCACATTACATTGTCCCTCTC--AGTTCCTACCTGCGTGTGGCCCTTTCCTCTCGTGGTTCCCCAGTCACTGTCTGCATTTCTGTGATCCTT------CCACCCTGAGCATGCTCAGCCCCAGGGCTTGCCACCGTGGCAGTCATGACTTCAGAGCCATTTGCATGTGAGCTCATCCTCTGGCCCTGGTCGTGGTGCCT-AGTATGTAATGC-ACCTAACTTCCTCTCTCCTGTAGTGAGGAAGAAAAACTGTCTACCTCTCAAGATGCTGCTTGCAAAGATGCAGAAGAGACCCCAGAGCCAGCAGAGGCCAAGTGCACAGCTCCCCTGACTCCCAGCAGTAGTCCCGAGCAAAGGTAACCACCCTGCCTTCACCCT--CTGAAGGCTCTACCCTGCCTCTGCTTCATACCTGGAATGTAGAAGGGAATCAGCTGTTAGGGTTGGGGGCCCAAAAGGTCTTTGCAGCTGTGCCCCAGCCTTTAGCAGTG--TGCTAGGGCACAGTGACATTTCTCAGGTCTCAA--GTAGTCAGATGCCCAAGCCGAGCTCTAAGAACAGCACTTAGCTTTGCAGCATGAGTCCCCGGCTCAAG-------------------CTTGGATGATCGAGAGCACTGGCTCTGCAGGAAGGTTCTGGAGA s bosTau2.chr29 3819710 988 - 45822729 CCACTGTTCCCGCTCT-----------CTCCCGCCACGGTTTGTCCTTCTCAGGCCTTGTCAGAGA-CAGCTCGAGAAGCTGGTC--CTGGCTCAGCTGCATGGCCTCCTGCTTCCGGGACCTCAGCCAGCAAGCCGATGGGGGGCTTGGCCCTGGGCGCAAAACCTTTAACTGAAGACTC--GTTCCTTCAAACAGGTTCATTTGACACCTCCTCCGAGCCTGCAGTTTTGCTTATATGCAGTCGTGGACGTAGTATTCCCCCAAATACCTCATTT-TAGGAGTATTCTGAAAGTCTTGTCCATTTCTTTTTCTGTTTTGCACCCTTGGCCTCAGAGTGTTGAGATCCTACCGGTATGTACAGTGCCGCAGGGCTGTTCTTTACCAGACACCAACCGCATCACATCGTCCCTCTCTCAGCTCCCAC--GTGTGTGGTCCTCCCGCTCCGTGGTCTCCCCG---------GCGTGTCTGTGGCCCCTGCGCCCCCTCCCCGAGCATGCTTAGCCCCGGGGCTTGGCTCCACGGCCACCATGACTTCAGAGCCATC-GCATGCGTCCTCATCCTCCG--CCTGCTGGTGCCACCTTGGCCTCTCACGCTGCCTGTCACCCTCTTTA-TGCAGTGAGGAAGGAAAACTGTCTACCTCTCAAGATGCTGCTTGTAAGGACGTGGAGGAGAGCCCTGAGACGGCGGAGGGCAAGTCTGTGGCCCCCCGGCCCCCCAGCAGCAGCCCAGAGCAGAGGTGA-----GTGCCTGCTTCCTGCCGGCCGTCTCAGCCCTGCCCCGCTTTGTCTCCTGGGAGCCGCGAGGGGCACGGGCCTCGGGGT----------GAGGGCCATTACAGCTGT-CCTCAGC--TCATCAGTAACTGCTC-AGCACGGTGGTGTTCCTCAGTCCTGTATGGCAGCCAGGTGACTGAGCTGAGAACT--------CAC---GTGTCGCAGCGCGCCT-CCTGGCCCAGAAGCTGAAAACTGTCTGCTTCTTGGAGG--TAGTGTCACTGGTTCTCTGAGAAGTTGTTGGGGG a score=1202 s mm7.chr19_random 1637243 119 + 2598976 TTGATGAGGCCATTATTTGAA--TGGTGTT-AACCCCTCCAGGATTGGAGT-CCTCTGTGGTCCTGTGAACTGTCT-----------CATTTCCTCATCACACTT----------------GTGACACTTGAGGGCTTGACTTCTCTGAG s bosTau2.chr29 3820739 146 - 45822729 TTGAAGGGGCACCAAGTTGGGGCTGATACTGAGCCCCTCCAGGATTGGGTTCCCTCTGTCCTGCAGTCACCCAGCTACCAAGACAAGCGGCTCCTGTGCCCACTTGTGCAGATGTGTCCACGTGACACTCAGG----TGGCTTCCCAGAG a score=5385 s mm7.chr19_random 1637463 607 + 2598976 ACGACAGCCTCACTGCCAAAGCCATGTGATTTGGA-TGTGGTGTTTTCTTTCTAGTCACCTTTTGCTTAGATTGAGCCAATGGTCAGAAAAGATAGGGCAAGCCAAGGCCTTAGCTGCAGAGGGCCTACACTCATACACTCAGCCTGGAAGGTAGAGCCAGGTCGCCAAGGAGTCAGAGGAGCCTACAACAGAAGATGGATGAGCATATGCCCTGGACAGCAAGGGACTTTGTTCAGCTCCTCTCAGAGCTCACTTCTCTGATAAAAAATATGTAAGATGTAT------------------------------------------------------------GTTCCTTCTGGAAGGAATAACGTGACCTTA-AAAGCAGTTGCACGGGCATTGGACTTTGTCCTTTAGCCACCCCAGTGGACTGTGCTCTGCAGACTCAGTGGGCAG--GAACCAGTGGGCATACTTA----TTATTCCTGGTTTAGAAG---------CCCCTGTTCAT--GACAGCCTTCTGCCCTGTTCATATTC---AGAAATTCTAGTCAAAATGAAGGATGGATTTATGATTTAGAAAAAAGTCTTTTTGCCT--ACAGAATCAATTATAAGTACTGTGTGAGCAGGTTGCTCTTA--GGAAGGCTTGGGGAGACAAGGCACTGGCTAGGG---TTCTAGCTATTGGG s bosTau2.chr29 3820982 644 - 45822729 ATGAAGCTCCTACCTGCAGAGTCAAGGGATTTGCAGTATAACGTTCCCTCTCTAGTGGGCTTAAGCTTAGCCTGAGCCATTGGTCTGGAGGCACAGGCCAAGCCCCAGCCTT------------------------CGCCCGTCCCCGAGGGCGACCGTAGGC--CCCACAAGCCAGGACAGCCTCCTCC------TGCATCAGAGCTTGCCTTGGACCACACAGACCTCTGCTCAGCCCTGCACAGAGGGAGCTTTTTTGATTGAATATATCCAATATATATTGAATATATCCTATGTATATATATATATAGAATCAAAAAGATACCCTTTTTTGATTGTAGATTCCTTCCATAAGGAATAGAGGAACCTTAGGAAGCCTTTTCAGGGACG-TGCTTTCTGCTCACCTGACCCCCCAA--------AATCCAGGCATTTTAGGGGCAGTATAACCAGTGGTTACCAGCAGGGGGCACTCTCGGTTCAAAAGTCCGTAAACCTCCTGTTCCTTGTGTAGCAAACCCAGCTTTTCATTCTCTTGAGGAATTACTGCTAGAATGAGGG------CTTTGCTTTTGCAATTAATTACTTTGTATAAACTGAGTCGGTTATAAGAACTACTTGTACCTGTTGGCTCTAGTGGAGGATTTGGGAGGAAGAGTC-----CGAGGGGCCCTCTAGCTGTGGGG a score=97368 s mm7.chr19_random 1639249 2182 + 2598976 CCGTCTC---CTCCTCTGCAGGACCGACCAGCCAAGCATGCCAAGCGACCCATCAGTTAATGGCCCTGTATGATGAGTGACGTCCACTGCTGCTGACTGAGGACTGCAGGCCACCACCACCCAGG---GGCTC---------TGGAGGGCTCACCCAGAGCTACTGAGCCACCACTACTGCACTC----TGCAAGAGATCAGAACCAGCAGCCTTTCTGTTTCTAGATTCTAAGATGCTGTACAGAGAGACTCAGACATGTA-AAACACTGCACATTGACAAATACCAAGAATTTTTTTGCGTATGTTTATATTGTATTGATCTAAATACTGGGTAGCCTGTGACACCAGATCTTGCCGCCCATGTAATAATAGTAATGATAC-ATAGTTCAGATGGTTGTAAGAATAGTTTTATAAA-GTGACTACACAGATCTATTGTATTCGAAACATAACTATTTGACAATTATTAGTGTGACCAAAGTATTAGGCAGTTTTCATACATTTTCCACCTTGTACAAAATTCTGAATTCATTTTTCTTCCAGGTTGGCACGGAGCTGTC-GATGGAAAAGCCCTCTGCGTGTTATATTTTGGTTGTTCTGACTTAC-AAAGTGATTTTGAATAAGAAATACTTGGTGTT-TTTTTATAACCCACTTTCAATTGGTAACTGTTTTCTGTATTGTTT-CAGGCGGATCAAATGCT-TGAGTC--TTGGTGGAGATTAAGTATTTATTGCTACAACTTAGTTGATGAATTGCTGTTCTTGTAAAGCCATATGTTCTGTTAAGGTCTGGTTTGCTCAGAGCGTTTCTTTCTGCAGGTGAAACACTAGAATATT-GGAGTGTACATGGC-TGTGGTTAGAATTTTAGGGGGGTTGGGGGGTGTTTGTTTTTTGTTTTGTTTTGGTAGTTCATCCGCCTTTTAACCCATTCACCAAAATGTCCCTTGT---CAGCAAGTATCACTGATGGCTATTTCAGAGTGGTCTGCACCCACA------CTGCTCTGTGTCACAGAGGTGAGTCTGG-AATGCTCATGTGGTGACAGGG--TAGAGTGTGCCCATCACGCGGGCTGGCTGT----AAC--AGAATCACAACCTGGCATCCAAGCATGTTTCTTGTTTTACTGTACCTTGTGAGGTTTTCACTTG-------TAAACCAGTGGA-----TTTTAGAACTGGTTTGTGT--GTATATAGTGATTATGGATACTAATTCAGTGTAATTTATAATTTTCTATGTCAGCGT--AAACACATCCTAGCCTCCTCCAACAGCTGAAGCAATGGCCTGTGCACTGCCGCGGCATCGGGTGAAGAGCTCAG-TCACCTCGCCTCTTGCACTTTTAGATGCAGATCAGTTTTTCATTCTATAATAGAAAA-TATTCACATATTTTTACATCATTTGTTTTTTCCTGACCAGTATTTAAAACCAAAAGGATATTCTGAAAAAATGGCCAACAAGTTTTTTAGAACCAGCATCCCAAGCAGTGTGCCT--ACATGACATCGCGTATGGAGAT----AGAGTCGAGTGTCCAATGCCTTACTCCTTACTCGCTTCT-CACTGTACACAGTGCAAGGGACC--------ACCTCAGGTGGCCGAGGCAGGCCTGGTCACCAGGCTCAGTGGG--CAGCAGGAAGCCCTGGGACTGGTGGCGAGG--GGCTCGGTGGCCTGTGCTTGCCCGCTCAGGA--CCCTTCAGTC-ACAGCTCCT-TCAGAAGAGACTGCGTT-----------CTCTGGAACCT-GGTGCCACCAGAGGACAGGGCTCCTTCTGCTCGTCTCAGGGATGGTTGACCTGCGTGGCCCAGGACCTC--ACATTGCTGGCGGATGGCATTCTCCTGTCTCACCTGGTTGACAAGCCTTG----------CTGACCCCAG--------CCAGGACTTGGCTCCTCCTAG------TCAGCCCACACTGCCTCCTTGCTGTGGACTGGGCTGGCTTTTCTGTCCCACTGTCCACTGGGAAAGGAACGCTTGGGTACTGTTCTTGGGAAAGGACTTA---GGCTTGCTTGTCATAAGGAGAGGCTGTGAGGGTGAAAGGGGACAAGGTGTGTTGG--GTTGGAGGGTGCCAG--CCAGGGCTTGTGATGAGTTCCTGCTCCT-----------TTTCATTTCTGTGTATTGGCCGAATGAATTGCAAGACTAACAGACGTCTACAGTACAGTACCTGTATC--------ACAAGTAATAACAAAATAAAGCCTGATGCTTTGTTTCTATAAACTTCCTCGTGAGCCTTTTTGGGGTTCTAATAGCCACATAG s bosTau2.chr29 3823440 2274 - 45822729 CCGTCTCTCGCCCCCCTGCAGGACTGAGCAGCTGAGCGTGCCGGGCGACGTGGCGGTCAATGGCCCCGTATGATGAGGAGCCCCCCATGCTGCTGACCGAGGGCTGCGGGC----GCCGCGCAGGTGGGGCTCCGGGCTGCGTGGGGAGCCCGCC----------GAGCCACCGCCGCTGCACTCACTCTGCAAGGGATCAGGACCAGCAAGCTTTCTATT-CTAG--TCTAAGACGCTGTACAGAGAAACCCAGACGTGTACAAATGTTGCACATTGACAAATACCAAGAATTTTT--GCATATGTTTATATTGTATTGTTCTAAATAATGGGTAGCCTGTGAAATAAGATCTTGCCACCCATGTAATAATAGTAGTAATACTATAGTTAAAATGGCTGTAAGAATAGTTTTATAAAAGTGAATACACAGATCTATTGTATTTGAAACATAACTATTTGACAATTATTAGTGTGACCAAAGTATTAGGCAGTTTTCATACATTTTTCACCTTGTACAAAATTCTGAATTCATTTTTCTTCCAGGTTGACAAGGAGTTGTAGGATTGAAATGCCCTCTAAGTGT--TATTTTGGTTGTTCTAACTTACAAAAGTGATTTTGAATAAGAAATATTTGGTGTTCTTTTTATAACCAGTTTTTAATTGGTAACTGTTTTCTGTATTGTTTAAAAACGGATCAAAAAATGTAAGTCTATTGGTAGAGATTAAGTATTTATTGCTACAACTTAGTTGAT-AATTG-TGTTACTGTAAAGCCATACGTTCTGTTAAAGTCTTGTTTGCTTGAACTGTTTATCCCTACAGGTGAAACACTAGAATATTGGGAGTGTACATGGCTTGTGGTTTGGGTTTT--------------TTTTTTGTTTTATGTTTTGTTTTGGTTGTTCATCTGCCTTTTAACCCATTCACCAAAATTTACCTTGTTAATAACAAGCATCACCAATGAACATTTCAGAGCAATCTGCATCTGTAACATACCTGAATCGTATTAGGCAAGTCAGTGGGGAAATGCTCGTGCTGCTAATGGAATTAGAGTGCGTTCATTTTACAGGCTCGTCTTTTTAAACTAGAAACCAGAGTCCAGCACCTCAGCATGTTCATTGTTTTACTGTACCTTGTGAGGTTTTCACTCGTAAATTCTAAACCAGTGTATTTTTTTTTAGAACTGGTTTGTGTACATATATAGTGATTATGGATACTAATTCAGTGTAATTTATAATTTTCTATGTCGATATAAAAATACATCACAGCCTTCT-CAACAGCTGCAGCAATATAGCGCACATTGCCGCACAGTCGGGTGGAAGGGTCAGATTACGTCACCTCTTGCTCTTGTAGATGCGAATCAGTTTTTCATTCTGTGATAGAAAATTATTCACGTATTTTTACATCATTTG-TTTTTCCTGACCAGTATTTAAAACCAAAAGGATATTCTG-AAAAATGGCCAACGATTTTTTTAGAAATAGCATCCCAAGCAGCGTGCCTAAACATTACATTGCATATGGAAATAAAAAAAATCAAATGTCTAATGCCTTATTTCTGGTTTACTTTTCCACTGTAAATGGTGTGGAGGCCCTTGGTGAGGTTTCCGGAGGCCGA-------CTAGCCCCCAAGGACAGTGGGGCCAACCGCGTGCCCTGGGACAGTCAGTGGGGCTGCCACACTGGCCTCTGC--ACCAACTCAGGGACCCTTTCTGTCGGGAGCTCCTCTCAGAAGACACTGTCCTCGAGCACGCTGCCCTGGACCCTCAACGCCGCCAGAGGACAGGCCTCCCCTCGCTGGTCTCAAGGGT-GCTGACCGACGCGGCCC--GACCTCGGGAACTGCCGGCGGCCGGCGTGCCCTGGTCTGGCCTGGTGGA-GAGCTCTGCAGGGGCCGCCTGGCTCCAGGGCTGCACACACAGTCCCGCACCCTCTGGATCTCCTCGGCCTCTGC-ACCTTCCCAAGGTAAACCCGGC-ATCTTGTTCATCCCACCCGCTGCTGATGGAAGGGCCCTTGGGGCTTCTCCTTGGGGTGTGTCCTGCTCGTCTCGCCTGGC--AGGGAGGGGACACGGGTGGGCA---GTGCAGAGCCTGTTGGGAGTGGGAGTCTGCCAGCCCCAGGGATTGGAGCGAGTACACGCTCATTGAGTTTCTACTTTAATTTTTGTGGGTTGGCCCTACTGAATGCAAGACT-ACAGATGTCTATAATACCAGACCTGTATTTAAAAAAAGAAAAAAACGACAAAATAAAGCCTGGTTCTTTGTTTCCAGAAGTCTTCTC-TGTACCTTGCTTGGGCTCTAGTAACCAGACAG a score=5149 s mm7.chr19_random 1649734 138 + 2598976 AGGACTTCAGACAAAGGGGACTGG-GTCACCTTGAGTTCTT---TTATTATGACTGC-GGCTTACTTGGAATGGAGGCACTGATTTACGACAGAAATGTCATGTAGGTTTTCTAAAATTAAAGTCCATTAAACTTCTTAAAAA s bosTau2.chr10 45753393 142 + 70001009 AGGACTT-AAACAGATGGGACTGATGTCATCTCGAGCTCTTCATTTGTTTTGAACGTTGATTTATTTGGAGCGGAGGCATTGTTTTTGAGAAAACGTGTCATGTAGGTTGTCTAAAAATAAAACGCATTTAAACTCAAAAAAA a score=10348 s mm7.chr19_random 1654947 405 + 2598976 AGGAAACCACAGAGCCTGGGGGCCGTCAGAGGCCCGTGACTAA---CGGCTAATGCT-GCTGTTGTCAGTCAGGCTCATTAGCAGAGCAATTTGAGCAGAGGATGGCATTACGCTAATTACT-----CAGCAG----CTTGTTAGAGCGG-GCA----CAGAAAGGTTCCGCCATCCGGAAATTAATCAGGACCCTGGCGCATTGTTGGGAGC-CATGAAAGCGGGCGGATGAAAA------AAT--------AAAGGTGAGCAAAGTTGCACAATAATTT---CTGTTATTTTTCTACTGTTTTATTTCCTCTGCTGAAGAGGATGAGAGCCATTGTTCGTCCTTTTCTCTCTTCTTCTTCCTCAAAG-----CTCTGCGTGGGAAGCAAAATGACTGGTCTAACAG--CCCCAGCCGCATTAAGCCCATTACGAGGACCACACAGA s bosTau2.chr29 3835997 418 - 45822729 AGAAAATTACAGGCCCCA--------TAGATGCATATGACTGATTGCGGCTAATGCTCGCTGCTGCCAATTATCCTTATTAGCACACGCCGTCAGGCCCAAAATGACATTA-----ATTACCACAAGCAGTAGTTCACTTGTGGGAACGGTGCATTGACAAAAAGGTTACCCTGTCCGGAAATTAATCATAACCTC--CGCTTTGTTGGAAATTCAGGAAAACGGGGAAAAGTAAGCGAGTGAATTTTTTTAAAAAGGTGATGAAAGTTACGCAGTAATTTTTCCTATTATTTTTCTACTATTTTATTTTCTCTGCTAAAGTGGACGAGGGCCATTGTATGCTTTTTT---------------TAAAAGAAAATCTGTGAGTGAGAGGCAAAATTACTTGCATTAGTGTTCACCCGAGACATTAAGGCCATTAGGGAGGTCATGCAAA a score=12719 s mm7.chr19_random 1660366 407 + 2598976 GAAAACATTTTCTGGCCTCAGAGTTAGAAGCATGGTTGCTTCCCACTCTGCCAACCCTCAGACTTGACAAGAACCAGGGACAGG---AGGTGGCTGTG---CCCCAGTGGCCTGAGGTCCCACTGCATCCTGAACCCTT----------------GGTGTGTCCTCCACT----CCCACGGCAGTCTGGC--TCTCCCGGGAGGGCTAATTTCTCTGGAATTTTCTCAGCTCAAGTTCATAATTCTGGCAAATGGTCTTGAAATGTATTTCTAATAGTTTCAAGGGAGACTCAAATCTTGTTAGGTGATGCCAATGTGAGTTTAAATATAAATCTCCACTTGCCTGGAACACTTTCAGTTATTAAAATTATCCATGGAGAGGCAAATAAAGACATAAAAATGTAAATGAGC---AGAGCCT--CTGCCAGGCACTGGGGT s bosTau2.chr29 44368087 436 + 45822729 GAGGACACTGTCTGTGAccaga--tccacgcgagcctggtccacgctgagctggcccccaga-tccacgggagcctggtccatgctgagctggcccTGACCCCTCAGTGCCCTGAGCCCCTCCTGCGTCTAAACCACGTCAGGGGTCCAGCGATGAGCTTGTCCCCTGCTGATGACTTCCGTGAGCTGGCCTTCACTCAGAAGGGTCAATT-CTCCGGAATATTCTCAGCTCAACTTCTTAATTCTGGCCAATATCCTGGAAATGTGTTTTTAATAGCTTCAAATGAAACTCAAATCTCATTAGGTGATGCCCAAGTCAATTCAAATATACATCTCCATCTGCCTTTAATGCTTTCAGATATGAGAGTTATGAAGGGGAAGGCGAGTAAAGGAATAAAAATGCAAACGAGAGGGAGAGACTGGCCCGCAGGCGGCGGGGC a score=5141 s mm7.chr19_random 1660876 443 + 2598976 GGCTCATGCCTCAGCCAC--ATTGTACAAAAAGGAACAAAAGCAAAAACCCAGATGTGAATGCAGCCACAG-GACAGCGCAGTGCCCAGCAGGACAGCGCCTGGCAGGACACAGCCTTCATCCTGTGTTCAGAAAACCT-GTCACCACTC----AGTCTCAATGGTCCAAATTACCGATAATTTCAGCACAAAAATCAGACCATTACTCGCTACTGCGAGATCGCGTCTGTCCTTTGTTGAAGAGTGAGAGGTGAGT----CTGTTCTCTGCAGACAGAAG---AGGCGTGGAGTGGGGGCGTTTCTGATGTCCCTTCACCCTTTTCCTGGAAGATCTGAGGCTGTCAAATGGATCTGCCAGAC------------------TTCTGTTGAAGCCATGAGCTGTGACCTGCCCCCAGCAGGCTCACATGTGGCCCCAGA-ATGATTTCAGGAGACTGACATCAAGCATAGAGCCCAC s bosTau2.chr29 44368610 403 + 45822729 GGCTCATTGCTCAGCTGTGGATTCATTAAAAAGAAAGCAAAACACGAA----------AATATAACCCCAGAAACAGC----TACTTTTCTAAAGAGCTCAT-------------CTTCATCCTGTGTTCAGGAAAGGTAGTCATCAGCCCATGGGCTTCAATGGCCCAAATTATTGATAATTTCGGCGT--AAATTAGGCCATTATGTGCTGCCACCAGGGCTC-TCTGCCTGCTGATGAA-AGTAAGCGCTGAGCTGTATTGTCCTCTGC-GTCAGGGGTGAGGGCGGGGGACAGGG---------------CCTCGCTCCTGTCTCTGGAGGCGAGGGGCCGCT-----GCTCTGCCGGCCGGGGCCCCGGGGTGCGGGCTCTGCC--AGACACACGCTGC--CCTACTCCCACCTGGC-------AGGCCCCAGGTGCGGCTCCAGGAG-----------GCACCGAGCCCAC a score=5584 s mm7.chr19_random 1664582 288 + 2598976 CAGCCTTTGGACTTGGCTGCAGGTGGAGCAGCGTTCTC----------------TGGTGAGCGGAAGCAG-GGCACAC-------GCTCCAGACTCCACACTGTCACCTCCCTGGGGGCTGGAGGACTTTTATTTTAAGAAAA-GTTCATTTTGGGGGGAGAGGTGTCATTCAATCTAGAAGGCTGCCAGGCTTCGTGACGCTGCTCT-GTAAAGGGCAGAAATAACTTAATAAATCAAATCTGATTT-GCAGGC-AGTGGCT--------------GGGGTCACGGGGCTGTCTGCGTGGCTGAGACGGGAGAGGAGGACAGGGTGTGG s bosTau2.chr29 44371141 314 + 45822729 CGGCCTGCAGGCTTTGATGTGTGGGAGGCAGTTTTCTCCTGGAAGGAAGGGGCTTGACCAGTGGGAACAGAGGCAGGCTGAAATAGTTCCCCACTTCATA-----ACGCTTTTAGGGGTTTTGG--TTTTCATTAAAAAAAAAAGTTCATTT------GCTATATGTTATTCAATTAGGAAATTTGCCAGGCATGGTGACGTTTTTCTTAAAAAGGGCAAAAATAACTTAATAAGTCAAATTTGATTTGGCAAACTAGCATCTGTATGCTTTCCAGAGGAGTTGAAAGGC---CCATGTGGCCCAGATGAGAGAGGAGTCAAAGGCGGGG a score=4846 s mm7.chr19_random 1671154 162 + 2598976 ACAGTGTCATGGGAAAGGGGATATCTGATGGTAATTTGAAATCTCTTCTTGGTTAATAGACAAAAATGCCAAGAGCTCTCTTCACGGCTGAACTCTTAGCGGAGAAGGGTGCTAAATGCTATTTCATTCTCTTCCTTGTCACAGGGGAGAGCTTAGGTGAGA s bosTau2.chr29 44375660 157 + 45822729 ACTGTTTCTTAGGAGAGAGAACATTTTAAGATAATTTCAAAACA--TCTTGGCTAAGAGGTGATAATGAAAACAGTCATTTTCACAGCTAAACTATT-TCAAAAAAAGAAACTAAATGTGCTTTTCTTTCCTTCTTTGTCTCA--GGAGACTTCAAGTAAGA a score=13898 s mm7.chr19_random 1673379 525 + 2598976 AGAAATCTGTTACTCAAAGCAGTGGAGGTCTGGGAAGGAGAACTCTGTCTGCCT-----GGTACCTTCATGGTGG-CAGAGCAGGGAGCAGGACAGTGGA------GGGGAGTCAGAGACAGGCCTGACAGCTGTTCCTGAGGGTCATTTCCTGAGAAAATTCCCACAACCCTCTCCACACACTGTTGCTCACATCCAGAGTGAGT----------TTCCCTGGCCATGGTG-------CCGGCCCAGA---CCAGCTGTCAGGCAGGGGCTGCCATCCGGGCAGCTTTCAGGGCAGCTTGCAGGACAGCTGCACTCCCCGGAAAAAGCTGTCCCTGGAGACAGTAATTGACCATGTCCTTTCCTTGTTGAGTTCAGCATGACTCGTCAAATAGAAT-AACAGGGTTTGGGAATTTAATTCCCCCACCAAGGTCACAACGCATGATGTTATT-GTGTACCACAGTGGGGGAAGATGTCCGTAGGCACTAAGGGCCCATTAACTGGATTTCCTCTTAATTAATTCTTATGCCCATTTTTTTTTCTAGCAGATTTATGTTT s bosTau2.chr29 44380775 534 + 45822729 AAATACCTGCAACCCGGGACATGGAGGCTCTGGGAAGGAGGATTTGGCTGGACTCTGGGGATAAGCACCTGATGGGCGGAGCTGGGGCCAGCACAGCGGCCACCCTGAGAAGCCCCAGACAGGTCTGACCACTGTTCCCAGGTGTCGCTTCCTGCCGACGTCACAGCAGCCCCGTCCCCAC-------CTCACCCCCTCGGCAAGCAGCCTGCAGGCTCCCCGGTGATGATGTATGTGGCCAGGCTGGGGGCCCAGCTGTTGGGCCGGGG-----------GCTGCTGCCCGGACAGCTTGCAGGACAGCTGTGCTCCCCGGAAAACGAGGGCCCTGGCGATGGTAATTGGCAATGTCCTTCCTTTG-GGAAGTCAGCCTGACTCTTCAAATATAATAAACAGAGTTTGAGAATTTAATTTTTTCCCCAGGGTCGTGATTTGTTCTGCTGTCAACGCATTACG--GGGGGAAGAAAGCTGTTCCCACAGAGGATCTGTCAAGCTGATTTCCTCCTAATTGGCCTTCA----CATCCCCATCCCTACCAGATCCAAGTCT a score=6816 s mm7.chr19_random 1676624 321 + 2598976 TAAAGTTCCCTGAAGTGTGATGGGTCCCTTAGAAGGAGACAGAGACAAGGCTGTGGATGACTGC-------------TGCACAGCTCAGGCAGAGGTGGCCTGTCCTCTTCAGAGACTTTACATCCCGAAAGCCAGATGGGC-CCCGTCTGCCCTGGACAATGCTACGGGTCTGTCTGACTCAGGGCCAGGAAGCAGGTGCAGTTGGCCAGGGCTG-GGCTGAGTCACCTGCTGCCTCAGCCCCCACTGTGGGCTGCTCATCAGCAGTTCTCTGCTCCAGGCTGAG------------------CTGGGTGAGTCACCCCAGGGTG---CCGGTGGAATCCCAGACTACCAGGAGGG s bosTau2.chr29 44385269 316 + 45822729 TGAATTCCCCTGAAGTGTTCCGGGTCCCTGAGAAGGGGGCGGAGCACAGG--GTGGCTGCTTCCCCAGCTCCCCCAGTGCCCGCCCCCCGCAATGGAAACGCCCCTCCCTTTGGGTCCCCCCACCCCGTTAGCCAGGCGGGCTCCCACATGGCCCTGGGGGTGCTGCCG-TGGGTCTGACTCAGGGCCAGGAAACAGGTGCTGCTACCCAGGCCTGCGGCTGAGTCAC---------CAGCCCAC-----------------------------CTCCAGGCTGAGCCACCCGGAAAACACCACCCGGCTGAGTCACCCCAGGCTGGGCGCAAGAGTATTCCCGACACCCAGGGGAG a score=18130 s mm7.chr19_random 1678743 971 + 2598976 GCTCCTTTCATGAGTCCATCTTCCCAGCATCAGCCCCACTGACAATGGATGA-----CATGTTCTTCCATTTGCTTGTATGTGCTCATTTCTCCATCAGACATCGGCTGAGTGTTTCCTGGGAGGTGTTGATCATAGTAGGTCCAATTG----------------CATCCACTGT--------AAAACTCCAAAGTAACAAGGCCTTGAACAAAAAGGAGA--GTTTCCCTCTGTTCTAAAACAAGCCTAGCAGCTGGCAGCGCAGGTACCCACAAGCACAGCTCCGTTAGCCTGGCTGTCATCCATTGCCATcaccttgggctccaagatggttgttctcctccagctcctaccttcaaattccaggcagaaggaagacggaaa--------accgagaagaggC-----ATAGAGCTGTCTTCCCCAGTGCAGAGCCCTGGATC--ACCCAGACAGATGTACCTGACTGTTAGGTCTGGCTCCCTGAATCCACAGCCCTTCCCGTGATAGCTGAATAGTTCATTGGGAAATTG---CTGTATATTTCGGTCTGCACCAGAATGGAA--TCCCTGAGGG--------------GCAGGCCC----CTCTGTTGATGATCTCAGCACTGCT-----------------------GAGACTCACTCCAGCTGTCCTCCAGCTCCAGCTCTCTTTGGTATTCAGATTTGGGCATTTTTCCTTGGTGA-------CAGGC-------AGCAGCAAGCAGGGCTTCTGAGGAAGTCTAGACT---------TACAGGTAGGAAATGACAGCTTTGTGTGCTGTGTCCATTACTCTAATGGTGACCCATTTTGCTAGCTCCACGCTGGGCTGCCTTGAAGATGACAAGTTGACGGTGTCTCTATTGGGTCATTGCTGAG--TGAGGAGTCCATTAGAAT-CAGGCTGTGGGCTCCAGCACAGAGTGTACCAGGAAGCAGAGACCTGCGACCCTGCACCCTGTCCTCATTTGTAGGAGCGAATCTGTCAGTGATATGGGGAGCCACAG--CCCCTCCT-GTTCCTGCCT-----------GCCCTCCTG--------CCAGTGTTTCCCGGGCAGGG s bosTau2.chr29 44387841 1065 + 45822729 GCCTCCTCTGTGTGCCCCTCTTGCCAACATTAGCTCCTC--ACCATCGTTGAAGTTGTGTATCCCTTCATTCACTTGTATTCATTAATTCATTCATTAAACATTTGCTA----TTTTGTGTGAAACACC-ATATTAGTAAAGTCATTCGAACTACATAGAACTAACATTTTCTGTTAACacagaaatcctccaaacaacatttagcttaagtaaaagaagtttgtttctctctgtagtaaaacaaggctggaggtcagcagcccaggCTGCTTCAGTCCCAGTTC----------------ATCCAAAGTCATTaccttctagtccaaaatggctgctcagttccaaccctcacattcacattccaggcagcaggaaggaggaaaggaaaaggacggAAAAAGGGCTACCCATGGGATTCCTTTCACC--TGGAATGTGCTGGGTCCCACCTGGCCAATCCTGCTCACCTGTCCGGTGAGGCCCTCCGAAT-----ATCCTTCTCATGATAATGAAGCAGTTATTTGTACAACTGTTTCCGTGCATTCGGGTTCCCACTAGATTGAAACCTCCCCGAGGGCTGGGACATCTGCTGCAGTCCCAGTGTGCTGCTGGGGGAAGCAGCATCTCTCCCGGGCTGGAGGAGGGAGAGATGAGACCCAGT---GCTGGACCACAGCCTGGGTTTTCTCTGG-ATTCTTCTTC------CTCTTCTTGCTCATCAGACCCAGGCTGGTTTTGGTGGTGAACAGGGCTTCTAAGGGAAGACGGGCCAGCTCACAATGCAGGGGTAAAATTAT-GCTTTCTGCTTGATTTCCATTACTTTAATGGTGACCCATTTTGTCTGCCTCACACCAGGCTGTCTTCAAGATGACAAGCTGA--GTGTC-CCACTGGGTCACTGCTGAGCACACAGAGCCCATTACAGCGCTGGCTGTGGGTCCCGGCACAGCCTGTGCCAGGAAGCCGGTGCCTGCCATCGGGGGTGTGGTCCTCCTTTGTCTGAAGGTGTCTGCTGGT--CCTGGGAAGGCAGAGCACCCCTCCTCACTTCTGCCTCGCTGTGGCTGCCTCTCCTGGTGCCCACCCAACTCTTCCTGGCCGGGG a score=7362 s mm7.chr19_random 1681718 815 + 2598976 CTCCCGAGCCTCGGGAGCGAGAGCGGTTCCGGTCACAGCGGCCC-TTGGGACT--------CGCAGGAGGCGG-CGCTGAGCCGGTGACGCGGC--AGCTCCCACTGG-------GCATAAATAGCGGCAGCAGCGCGGCTCCTGCCACGGACACGTCGAGGGATCCTCG------TGCGCTTCCCCATGCCGCT------GAGCTGCGCCGTGCAGTAAGCGACCATCCAGCCC-GCCACTCTTCACC------ACGCCCGACCC----------GGACCG--AGAGAGCCTTGATCCTGCACTGACCAGCCACGCCCGGTTCTCACCGCTGCTCAAGGTACCTGTGTCTCACCGAG--------ACTTGT----CAGGCTCTA-----------GTCCTCCTGCGGTTG---CCTCCCCAT------CGTTGCCCCTGCACCCCTCAC--AGCTCTGTTCCTTTCACCCTTCCTCCCA-------CTCCCACACTGATACCATCGCAGTCTGCAGGCCAAGTGCCCCCAGACG-TGTGCGTGTTGAGG--------TGGTGTCAACTCATC-----------CACTTTTCCTTCCAGATGGCCAGAGGCAGCGTTATCCTGCTAGGCTGGCTCCTGTTGGTTGTGACCCTGTCAGCCACTCTGGGACTTGGGATGCCTGTAAGTACTGATCGGAAAAGAA--------------------------GACTAAGGGTGTCAGACC---TGAGGATCTGCCTGAAACAAAGGATGG------TTCATTGTCCC------------------------------TGCGGCAGGAGTGCAAGGG-----------------GTGGGGGTGGGGG------------------CATGTCCCTGAAGCTGCTGAAGGTAGGGAGGGTTCCAGGAGAAGG--GCTGAGGACCACCTGGACACAG---------GTTCAAAGTGGTTCCATTCATGGccaggtgtagggggccc-----------aggtttgtaatcccagcactcaggaggga s bosTau2.chr29 44391786 1027 + 45822729 ctccgaggcccccggggACTGAG---TTCCGGTCACTCCCGCCCACTCGGGCGGGCGAGGACGCGGGAGGCGGGAGCGGAGCCCGTGACGCGGCCGAGCGGCTCCGGGATGCGCCGCATAAATAGTGGCGGCGGCG--GCTCCCGGCGCTGACACGTCGAGGGAGCCCGGCCGCCCTGCGCTTCCCGCTTCCGCGTCCCCGAGGCCGCGCCATGCGGTGAGCGTCC--CCGGCCCTGCCCCACCCGACTCGACGGACGCGCGGCCCCGCCGACAcaggacctgcagacaccccaggacccgca--gacatccccCGACC--CTCCGGGCCCCGCTCAAGGTACC---GCGCCCCCGAGCTCACCCCACTTTTTCTCCGCGCTCCCCTTTCCAGAGCGCCCGCCGGCCGGTGGACCTTccccggggccggcgcggcgcctccgcccctggccgggcTCTCTCCTGGGCACCCTGGCTCCTGGCTGCTCCTCCCGCAC-----CCGCAGGGGTGGGGGTGTCCGGAGCCCCAAATCGACGTGCGCCCTGGGGAGGGAGGCCGGTCTCCCCGCACCGCCGCCCACCGCCCCTTCCCTTGCAGATGCCCAGAGGCTCCGTCCTGCTGCTCGCCTCCCTGCTCCTCGCAGCGGCCCTTTCAGCCACCCTGGGCCTCGGGTCACCGGTAAGCGCTGGGCAGGGGCAAACGCCCCCCAAGCCGAGTCTCCCTCTTGGCAAAGGGGGGGCGACCGCATCAGAACCAGACTGGGGGTGGGGGTGGGGTGAATGCCTTGTGCCAGGAAAAGAGCCATGGGTTCTGCCTCGGGGTGGGAGGGGGGTGTGGGGGCGTCGGAATACTGGGGAGTGGGGGTGGGGGGCGGCGCCGGGAGGGACCTGAGTCCTCAGAGCAGACGGATGGCGGGCGTTTCCGAGGAGATGCTCGCTCGGATCCTCCGGGCAGCAGCCTCTCCCAGTACAAAGAGCCCCTGGCTATGGACCACTAAATGGGGACCCTGTGAACCAGAGGTTAGTG-CCTCAG-ACTAGTGAGGGG a score=6744 s mm7.chr19_random 1682944 223 + 2598976 CTAACCCTGTGTAATCCTGTTTTAGGCAAAGGAGAAGAGAGGTTGGACCCTGAACAGCGCTGGCTACCTTCTGGGCCCACGTGAGTGATGCAGGGCTGG-------------------ATGCTGAGGCTGGATGGTGTCCAGATGTGAC----------------TATGGGA---GCCAGGCACTGTTCTCAAAGCCCATTTACTCTC-----------AGATGCAAAGAAGCAGGGGACATTCCTATGTGGTTTTGGGG-ACTGTGGGTTTC s bosTau2.chr29 44393301 269 + 45822729 CTGACCCC-TGCCCTCCCGTTTAAGGTGAAGGAGAAGAGAGGCTGGACCCTGAACAGCGCTGGGTACCTTCTCGGACCACGTGAGTGAGGCCGGGCTGGCATCTCCGGCAAACCTGCTCTGGTCTAGCTGGCTGCAGCCCTGTGCTGACCCTGCTCTTCCTGAAATGTGGGGGTCGCCGGTCATTG--CTCCAAGCCC-TTGATTTTCCACTGCGAGTTAGATAAAGGGACACAGGGGAGTTTTCCCTGAGACTTTGAGGCAGGGTGGGTTTC a score=10353 s mm7.chr19_random 1684630 568 + 2598976 ACAACAGTGACAGATGGCTTTCTCTCTGGTCTGCAAACAGATGCCATTGACAACCACAGATCATTTAGCGACAAGCATGGCCTCACAGGCAAGAGGGAGTTACAACTGGAGGTGGAGGAAAGGAGACCAGGTAAGGCCTGAGTCCCAAATGTAAATGCCATCATTCCTGGGACTCCCAGGTGCATGTGGCCATATGGTGTGACACCCACCACCCTTCTGCTTCAGTCATAGCCTAAGGCTGCCCTAGCCACACCTTTCAACTGCCAGGACTGGGGA-GCAAAGTTTTGGGGCATGCACCTACAACAAGGGGCCTGGCCACAGAGGCCCCTGGGAGAGCTGGCCCAGGACCCCCAACACCCCCACTTCTCTAGAAAGGCCCTGGATGGCTTAG-GATGTCTCCAGGCCCCCGGGCAGCCTCCCTGGCCTTTGAGGAGGGTGGTGAGGAAGCAGGCTGTGAACACCGTTCTTTTCCATTGTCTAGGAAGTGTTGATGTGCCCCTGCCTGAGAGCAACATTGTCCGCACTATAATGGAGTTTCTCAGTTTCTTGCACCTTAAAGGTATGGGAA s bosTau2.chr29 44395846 481 + 45822729 ACAACACT--CAGGTGCCTTCCTCCCTGATTTGCCGACAGATGCGCTCGACAGCCACAGGTCATTTCAAGACAAGCATGGCCTCGCCGGCAAGCGGGAACTCGAGCCTGA---AGACGAAGCCCGGCCAGGTGAG-------------------AGGACTTTAATCCCAGGGCGCACAGG-GCA-GTGGGGGTATTG---GCCTCCTACCACCCCCAATCCACAACCG-AGCCTGAGCTGGGCCCCACAAAATCTGTCAGCCGCCAGAACGAGGCACCCCAAACCTGAGAGTAAGATCCT-------GGGGC--GGCCACAGGGTCTC-----AGGGCCTGCC--------------------CTGCTCTGGGAGGG--AGGGGCGTCCCAGTGATGCCCCCAGGTGCCCAGG---------------TCTAGGACG-------GGCACCCGGTCGTCACCCCTGCCCCCTCTGGTT-TCTAGGAAGCTTTGACAGACCACTGGCGGAGAACAACGTCGTGCGCACGATAATCGAGTTTCTGACTTTCCTGCATCTCAAAGGTACGTGAA a score=3441 s mm7.chr19_random 1686146 193 + 2598976 CTTTAGAGGCCGGGGCCCTCGACAGCCTGCCTGGCATCCCCTTGGCCACCTCCTCAGAAGACCTAGAGAAGTCCTGAGACCATGTCCACTGTGCACGTGTGTCCTGTGCTGTAATTTAAAGTCATTCTAGGCTAAGAAGA-----ATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGT s bosTau2.chr29 44397316 180 + 45822729 CTGCAGACGCCGGCGCCCTGGAGCGCCTGCCCAGTCTCCCCACAGCAGAGTCCGCAGAAGACGCCGAGAGGTCCTGAG--CGGGCTCCC---GCGCGTCGGTCTCCCTGTGTCACGCGCAGTCGTGCT---CCAGGAGGATGCCCATCGCATGGCAACCGCCCCATCC----------CCGCTGCCCTGATGCTGTGT a score=13900 s mm7.chr19_random 1689201 202 + 2598976 TGCACGCTACTCAATTTTCAGCCCCTTGGACTTGAACTCGATGTGGAGAATCTGCGACAGGCACCTTCCAAACTCCTCCAGGATCATCTGCTCAGCCAAGCTTGGGGAACAGTGCTCCTGCTCTGCTTCCTCACCCTGGGCCAGCAGGCAGGCACATGTGGCCTCCACTACTTCCCAGGAGATACAGGAGAAGGCCTGCCTG s bosTau2.chr29 44407004 202 + 45822729 TGTACTCTACTCAATTTTCAGCCCTTTGGATTTAAACTCAATATGGAGAATCTGTGACAAGCATCTGCCAAACTCCTCTAGGATCATTTGCTCCGCCAGGCACTCTGAGCAGTGCTCCTTCTCTGCTTCTTCGCCCTGGGCCAGCAGGCAGGCGCATGTGGCTTCCACCACCTCCCAGGAGATGCACGAGGTCGGCCGCCTG a score=2132 s mm7.chr19_random 1690535 74 + 2598976 GAGCATTTCTCTCCTCTCTAACTGAATAAGCCTGGGTTTGGCTTTGCAAAATGAAGTTGGCTCATTTGTGACAT s bosTau2.chr29 44408119 74 + 45822729 GAGTATTCCTGATGTCTCTAACCAACAAAGCAGGAATTTGTCTTTTCTACATGTTATCAATTAATTAATGACAT a score=14377 s mm7.chr19_random 1691194 254 + 2598976 GTTCAGAGCACTCACCTATTTTTTCTCAGTTTTGGAGGTCCTGAGAACTTGGCTGGGGACAAATAATGGCTGCTCTCAAAGTCCCCAGGCTCCATGTAGTGGGGTGTGCTCATCAGCATTTTTCGTTCTGGACTTTCTTCATAGTTTTTGCAAGCAATGCATTTGCAAATGGAAGAACACATGATTTTGGCCTGATGATAAAAAAAATGCTTTGATGAAGTCAGGGTTTCCACACAAGCCACCCAGCACTCACA s bosTau2.chr29 44408938 251 + 45822729 GTTCAGAGTACCTACCTATCTTTTCTGAATTTTGGCAGTCCTGAAAATTTTGTTGGTGACAAATGATGGCCGCCTTCAAAACCTCCAATTTCCATGTAGTTTGGCATGTTCATTAGTGTTTTTCGTTCTGGGCTTTCTTCATAATTTTTGCAACCAATGCATTTGCAAATAGAAGAACACATAATTTTGGCCTGGTAAC--ATAAAATGCTTTAATAAAACTA-GGTTGCCCTAGAATTCATCAAAAACTGACA a score=12172 s mm7.chr19_random 1692075 583 + 2598976 TTCTAACCACAAAGCTACTTGGA---TGTCTCTGCTTATTCCAGGAAGC---TGGCACTTG--------CCTCATAGCACTCACAGTAGTTCTTCAGGCAGCCTGAGCGCTTACAGTTGCACCCTTTGCTGTGTCGAAGTTTAGCAGCTCCCAGACGGCCTTTCCCCATTTTTGGTTGGAAAGCTTCAGGATTTCTATCAAGACACGCCTAAGAGAGAACATGAAAA---CCATCAGGAGATGCATGGGAGTCAGAAGCAAGGCTCTGTGCAAGGGAAGACCATGCAGGGGAAGCCACTGAGGG----AGCTAGGGCCTCAGGACATGACAGAGGCCTTGAGGCTTCTGTGCAGCTATGCCTCACCTCATAGAGAACTGTGTTGGTGGCTGGGTTCTAGAAGCACTGAGCCCCTTCTCTGCATTTGATAGCTCACCATATGTACTGTAG---GGAATAGTACATAGTAAGGATGTAAAGAAAGCCAGGGTG-----------------CCTTCCACTTGCCT---TGCACTTTTGCCTGAG------GCAGGTGAGGCCATGGCA--TAGCAAACTGCTCAC---------ACCAGCAC------CTAGCCATCTTTCTCTCTGATGCATACTGTCTTTCATTTCATCCT s bosTau2.chr29 44410805 578 + 45822729 ttttaaCCACAAAGTTACTTAGACCATTTACCTGGCTTTTAAAAATAATGCTTGGCAATTGTTGACTGACCTCATAGCACTCACAGTAGTTCTTAAGGCAGCCCGACCTCTTGCAATTACATCCTTTGTTATGTCGAGGCTTCACATCACCCAGTTTTCCTTTCCCAATTTTTGGTTGGAAAGCTTCTGGATTTCTATCAAGACATGCCTAAGACAGAAAATGCAAAACTCCATCAAGATATATTTTATTACTTAAAACAATGCTTAGTGCCA--------CGTATCTGGCTTGCCATAACTGGGTCTAGCTGTAACTTCAGGA--------------------------GCGGCCACGAC--------------------------------------GAGCAGCGGGCCTCTACCCTGGTCCTGCTCCATTCTCTTGAATACTTAAAGGTGGAATAGTGGACGGTAAAGATGCAAAGAAAATCACTGTGTCCATTTGAACACAGCTCCTTCCCGGCGCCTGTGTACACTGTTTCCTGAGATGTTAATAGTTGGGATCACAGCACTCTGCTACCagctcacatttattaaacgtgcactgtgttccaggcatctttctgtgcgatgtatgcattctctcactgaagcct a score=6085 s mm7.chr19_random 1693737 156 + 2598976 TTACCTTTATGGCTTTGAAGCGCTCGAGCTCATGGCGCAGGTTGTTGCAGC------------TGCAGCTGTTGCAGAAGTCCCCGCTGGAGAAGCAGTCACAGTACCTGTGAGGGAGAACTCACTGAGTTGTGCACAGGCATCCTGAGGTGAGAGTATGCATACAAG s bosTau2.chr29 44413524 163 + 45822729 TTACCTTAATGGCCTTAAACCTTTCGATTTCATGACGTAAATTGTTGCAACAATTATTACAATTGCAGTTGTTGCAAAAGTCCCCGTTAGCAAAGCAATCACAGTACCTGTGGATAAAACAACACAGCG-TGT-CAAAGGCACCC---AGCGAGGAGATGAAGACAAG a score=5267 s mm7.chr19_random 1694313 306 + 2598976 TCCTCTGCCATCAGTCTACTCCCACTGTTGGCTGGGAAACCTCATGGACAGCCACTACCACTTGAATGTTGTGTTCCCT---TTGTCAGTGAAGTATCAGTGAACGCCGAATGCTGTGCGACAGCTGCCA-CCTCTAGGTCTACATTACTCCAGGGT-GGCTGATGGCAATG--------CTTTCTGGGTCATCCTGCCCCAGTTATT--ATGGAGAGGTAAAAACGGTGTTCGAGGACCTGCCTGTGACGCCCTGTGCCACGTTTCCTTTAGAAGCAGCAGAC-CTTAATGGTTGAAACTTTTTGTTGCCCAACTTGGGAA s bosTau2.chr29 44423343 306 + 45822729 TCCTCCTTCCTCAGTGCACTCTCACCGTTGCCCAGGAAACCACGTCTACAGCC---CTCACTCGAGGTTTGTGGCCCCTCTCTTGGCTATGAAACACCAG-------CGCATCATCTGCTGAAGATACTGTCCTCGAGGTACAGACTGCTGCAGTGCAGGCAGACAGCAACTTTCCAACCCTCTGTGGGTAGTCTTACTCT-GTCACTTAATGAGAAAGTGACAATACTATTCAAGAAAATACCCAGGATGCTCTGTGGTACGTTCACTTC-----CCGCAGGCACATTGTAGCCTAAAATTTTAGTTGTAGTGCTTGAAAA a score=7618 s mm7.chr19_random 1696161 122 + 2598976 AATTTCAGGT-CAGGGATTTGGTGCAGGTACGTGGCTCTTTAGACTTTGTGTCCCATGAGCTCAGAGTTACTCTACAAAGATTGAAAAGGAAAATGTCTTCAGATGGCTGGTCTGGAAAAAGA s bosTau2.chr29 44427725 123 + 45822729 AATTTCAGACACTGGGATTTGGTACAGTTACATGGCTTTTTAGACTTTGTGTCCAATGAACTAAGAGTTACTCTATAAAGATTAAAAAAGAAAATGTATTCAGATCATTACTCTTCAAAAAGA a score=3272 s mm7.chr19_random 1697488 116 + 2598976 ACTGGGAAAGGCTTCTGTGGCTTTGGCA------GTGTCTGACTATTGTCCTAGT--------GGGGCCAAAAGGCCTGTCAAGATCTGGATAACCTCGCCTCTGCAGGGTACCACAAATGAGTCACACC s bosTau2.chr29 44430078 130 + 45822729 ACTGGAAAAAACTTCCATGGCTCTAATATTAATCATATTTGACTACTCTTCTATGCCAACCTGAGAATTAAAGGGCTAGAGGAGATCTGGACAACTCTGCCTCAGAAAAGCATTATAAATAAACTGTACC a score=8079 s mm7.chr19_random 1698785 596 + 2598976 AGTTCTTACCAGGGTGCCCAGTTTAATCAGCTGCAGC-ATACACACGGCATTAAAGTGGACAGA-GTGGACCTGGGTAAGTGCACCTCATGCCCACCTG-AGACTATGGACATG------TGCCA------------------------CAAAGTGTGTGCCAGGGACACAGAGGCAGCGCTGCAACCCCTCACTAGCCACATAAGCAGCTGCCACTATGTGACCTGCACTGA--------AAGAGGAGACAGTGTGGCACTACCCACCTGAGTGCACAC-CAAGACAG--AGCTACAACTGTGGATC-ATGGAACAC--ACATGGGGTAG----CAGAGAGTGGAGGGGAAGCCAGG----------GCCT--------ACCACTAAT---ATACCCACAGGAAG---GTTAGTG-----------------ATCTTGCTCTGGGGGCAGGGACAGGATGACTACTGATGTTCCAGCAGAGTTCATTTTACAGTGCAGCAAGAAGAGCA---GCTTACACA---GCATCTTAGATGCTTGCATCACAGGCAGTGGCTTCTGACTTTAATCCTTACCCAGACAGAGTTATTTT---GGGTGGCCCTTGCAGAGCAGGTCCAGAGGGAAAGGCAGCCCCATTGACAGCTGATGGGAGAGCTCCATTATCAACCTG-ATGGAGGCAAA--CAAGAATGGTTT s bosTau2.chr29 44431859 668 + 45822729 AGTTGCAACCAGCTTGGTTAGTTTAGTTAGTTACAATTATAGACATGATTTTAAAATGTCCAGACAAGGTCCCAGATAAGTGCAGC-CATATCCACCTGCAGACCATGTGCCTTGGACCCTGCCATTGAACCTGAGCAAAGGCAGCGGGCAGAGGCTGTCATAAAGGCACGGAGACTGCGGT-CAGCAT-------------TAAGTGACTGCCACACCATTACCTGTGTTGATGACAGCAAAAAAGAAACAGAGCAGCCAAGTTTAAGCCAATGTGCTCTCAAGACAGCTAGGATCGGCAGCAAACCTCCGAAACACTGCCACTGGGCAGTGGGCAGAGAGTGGAAGTAAATGAAGGTTACAGACCAGTCTTTCAAGCAACCACAAACCAGACACTCACAGCAATACTGTTAGTGCACTGCTGAATGTAAAAATCCTATTTTAGAAGTCATGAAAGTTTG------------CAGGTAAAGTTAACTTTAAAACTCAG-AAGAAAATCACAAATGTACCCAAGAGCCTCTTAAACTCTTACATTAAAG----TGACAGTTGCTTTTAATTCTTACCCAGCCAAAGTTATTTTTGGTGGTGGTCCTGGAAGAGTTGATCCTGAGGGGAAAGCAGAACCGTTGATTGCAGATGGTAAGGCTCCACTGTCAAGCTGTGTAAAGTCAAAGGCAAGCATAATTT a score=7199 s mm7.chr19_random 1700318 188 + 2598976 ACTCACCTGT---GTGATGAGATTTAACTTCGCTGGTACTGGCAGAAGTCTTCCCACTAAAGTTGTCATTGGCTTAGGGAGCTCTGT-AGGAAAACAC------TTGACATTAACTGACAGCAGACACTG--------------------------------AAAGGTG-----------TAGGTCTGCCATGGGCAAGGCTATTTAAACTTACCCTGATCTTAGTCTTTTTGTTTTTAAT s bosTau2.chr29 44435441 238 + 45822729 ACTCACTTGTTGTGTAATGAGATTTAATTTTGCTGGTACTGGCAAAAATCTTCCTACTAAAGTAGTCATGGGTTTAGGGACATCTGTAAGGAAGACACAATTAATTACAATTAATTGATAGCATATATTGTTCCTTTTCCACTTGCACATGGAATAAAGTACAAAAATGATAATGTATCATGAGTTTAACATGTGCAAAGTCATTTACACTTCTCTTGATCCTA---TTTATGTTTTCTAT a score=7363 s mm7.chr19_random 1702268 191 + 2598976 GTACCTGACTGAGGGAAACTGCTCTGGTCATCGTACTGAGGAAGCAGATGGAGCGCTTTGAGCTCCCTCGCGCCACAGTTGTCTATGCAGAGCATCTGGGCGCCTCCTTTCAGCTGACAAATCACCTGAAATG--ACATGGTGAAGAGGGCAGATGACTCCAGCTTAGAGCAG--------------------GAACAGACTGAAATCTGAGA s bosTau2.chr29 44437341 205 + 45822729 GTACCTGACTGTAGATAATTATTTTGGTCTTGATACTGAGGAACCAAATGAAGTGCTTGTAGTTCTCTTGCGCCAGAACTGTCTATACACAGCATTTGTGTGCCCCCTTTCAACTGACATATCACCTAAAATGAAAAATAATGATCAGG--------CTCCATTTTTAAAAAGATATCCAGTAATATGAATCTAAGTAAACTTAAATCCAAGA a score=2783 s mm7.chr19_random 1702482 360 + 2598976 GGAAGAAGGTGGGTATGTTCTCCATGTCTTCCTCTACACTAACTGCTGCTCCCTAG-----CCCCAA-----------CCCCATGTA---TTCCTGGGATGTATCCACA---TATTCATAGG-----TTGCTCCTGCAT-CCTCTGAAGGACT---------------------TGGCTATGAACTGAGATTTCT---------TCCTGATG-TCCACAACCT-----AGTGGACAGG-------GATCTGCCTG-------CCCCCTAAACCTCAATTTCCTA----------------CCTCTGA---GACCTCTGGGGGCTAAGCACATTTGTAGAATTAACCTTAATTTGCTG---TGTGTTCTTCCCTGCTGCAGAGTCAGGTTATTATCTAACAGGTGATCTTGTGGATTTTTTATGCCTG-TTGTTTTATTTCCTATAAATACAGTTAAGAAGG s bosTau2.chr29 44437585 455 + 45822729 GGTAAACTATAGATATATTCTCACTTATTTACTCTACAATAAC--ATGCTCTCTGGAGGGACCACAAGGCAAAAAAATTCCCGGGGAAACGTCTTGGGAGGTGTGTTCAGTGTGTTAAGAGAAGTTCCTGCTCACACCTGTCTCTACAGGTATAGGCTTAGGGTAGGGAACAGGTGACTATGAACCAGAGCTTCTGTCCACCTGTCCAGGTACTCCACGGTCTTCAGGAATGGAGAGAGTGTGCTGACTTGCCTAACCTGGCCCCACTGAAATCCAGTTAACCATAGGAAGGGCTTTGTCCCCCTGACTCCATCTCT-GTAGCTGGTCAACTACTTAGAATAATCTTTAATTTTATGACAGTTGTTCTCTCCTTCCACATGCACATGTTATTATTTAACATTTAA---TGTGTTTTTAAGATACCCATTTATTTCATTTCCTACAAGTACAGTTTAGAAAG a score=3297 s mm7.chr19_random 1703024 112 + 2598976 GAAACTCCTAAGAAACTATGTTGAACTCATGGGGCCTGACTAACACTGCCAGAC--CCCATGTGGGTT-TGAGCACTC----AGCCTTAGCAAGCCCATCAGAGCCAACAGTCCATCAC s bosTau2.chr29 44438056 118 + 45822729 GAAAATTCCAAGAAACCATGTCAATCTTTCTGGGCCTGACCAGCACCCTCAGATCGCCTAGTTGGATTCTGACCATATATAAATCCCCAGCAAGCCTGGT-GAGTCACCAGTCCACCAC a score=11688 s mm7.chr19_random 1704037 210 + 2598976 ttttttttAACATAGTTACCATGGGGCTGGAGTCTTTCTTCCGAGGGCAGCTGGAGGCCTCCTCTGCCTCCTGGGATGATGGGAACTTGCAACAGGATTCCTGAGCCAGAGGGGCCTGGAAAGCTGCGTCTTCAGGGCTGCCGCCTGGCACACTACCACCTGCTTCTTTGATTTCAACCTGGAAAAGCAGTGGTCACATTAGAGGATACA s bosTau2.chr29 44439669 210 + 45822729 TTTTCTTTGGCATAATTACCATTGGGTTAGAGTCTTTCTTATGAGAGCAACCAGAGGCATCCTCTGCTCCTTGAGATGATGGGAACTTGCAACATGACTCCTGGGCCAGAGGATGTTGGAAGGCTGCTTCATCCAGATTGTTACTTGTGATAGAACCACCTGCTTCCTTGATTTCAACCTGAAAAAGTAAACGTTATCTTAGAAATCACA a score=3715 s mm7.chr19_random 1705091 109 + 2598976 TTAGAAGACAAGAAAGTACAGTTAGGTTTTGAGGAGCAGCCTTATGCAGAA--TTCAGATTTTACAGAAATGCAGGAAACTTACACTTTTTCTTGCTTGCTGCCTTGGGAA s bosTau2.chr29 44442144 110 + 45822729 TTAAGATATAGGAAAGTTTAGCAATATTTCAAGTTATAACTTTTTTTAGACATTTCAAATTTTACAGAAATGTA-GAATTTTTCAATTTTCTCTGCTTTCTGCTTTGGGGA a score=5547 s mm7.chr19_random 1706099 257 + 2598976 CCCACCTTCTCTGTAAATT---GAGCAGGGAACAGGATTTCTGGGTTCTGAGCTCTACTAGCTGTGACTTATTGGTGTACAAAGCCAGGCTCCTGTCATCTCCACAGAGATTTAAAACAACAAAAATTCTATGAAGGCTTACTCTAGACCTGACACACTTGACTGGATGAGGAGCCCAGTTTCCCAAGCAGGGTTCTTT--GGGGGCTG----ACCTGTGCCTGG----------TTTCCTTTAAAAGGTTGATTCCTTTCTATTGGCAACAGTGA s bosTau2.chr29 44443181 260 + 45822729 CCCAACTTTCCTGTGCACTAAGGAGCAGAAAACAGGAAT--------CTAAGCTCCTGCTGCTACGGTTTAC-GATATACAAAGTCAGGTTCCAGCCATCTTAATACCAACTCAAAA------ATGTTCCACACAGGCTTAATTTATAACTTACTAAAATTAGTGGTTGAGTAATCTAATTTTCCAAACTAGATCCTTTTGGGGGGCCAGTACACATTTCCTTGGAAATCCTTTTCTTCCTTTAAAA-ATTGATTTTTTAGTTTCAGCAAAAATAA a score=7916 s mm7.chr19_random 1706946 459 + 2598976 GGAGAGGCGGCGCGACGGTGGCCCCTGCTGGCGCTTACTGGGATCACGCGCACTCCTGCGCTTAGCGGCAACAGCGCGGGCCCGCGAGCACCGGGA----------------------------AGTAACGACGATAACACGTGCACGCTGTAGGC------------GGGAGGCGGAGCGGCGTCGTCTGGGCTGCGGAGCTCGGGCAGCCCCGGGAAGTCGCCGAGCAG------------------GGCGGCCGGTACCTCAGC------------------------GCCCGGCGGGGGGCTGAGCGCACGCAGCAGCGGCTCCCCTGGCTCGGTGGCGCCCAGGTAGGCGTCGGCCAGAACCGGCAACTCATCCCGATCG-GCCGCACCGCCTGCGGGG--CTCAGCGCCAGCCCGTCCG---CGAACACACGCTCTGACCCGAACAGCTCGGCGCCCAGCTCGTCTTCGGGGCCAGTCATGGCGCCGAGCAGC---GCGTCCTCCATGGCCACTGG---------GACCCGAGAACAGC---------GACACGACGCGGCC s bosTau2.chr29 44445394 556 + 45822729 GGGGGAGCTGTGCGATG-----------CGGATCTTACTGGAATCACACGGACACCGGGG-TGGGTGGCTCCGTCCCTGGCCCAGGCGCCCAGGGGCACGACGGCAGAGCTCCTGTGCGGGGTGAGCAGGGAGGACAGGAAGTGGACGTTGTAGGCCTGCGGCTGCGGGGCAGAGAGAACGGTGTCTTCCAGGGGGTTGAGCTCTGGGAGGTTCGGGTACTCCCCCAGGAGTCCCTCGTCTTCGTTCTCATCCACCAGCAGCTCCACTTTGACCTTGCTCTGGCAGTCCCCGCCGAGCGCGGGGTTGAACGCGTGCAGCAGGGGCTCTTTGGGATCCGCTGGGCCCAGGTACGCATCCTTGAAGACGTGAAAATCGTCTTCCTCGTGCTTTATCGCCACCGGAGTTTTCAGGGGAAGGTTTTCAGGAACAAACTGACTCTCGGCACTGAAGAGGTCTGTCACCATCTCGTCTTCGGGGCTGGACATGCTGCCCAGCAGAGGGGCGTCTTCCATGGCCACTGGGGGCGTCGAGGCCCGGGCATCGCCCCGCACCTGCAACGACGCGGCC a score=15023 s mm7.chr19_random 1710546 1043 + 2598976 CCTGATTAGTATGACAAGGGAGACAGGGACAGATGATGTAGTAGGCGGGATTAATGTTTT-ATTAATGGTCAGCTATATTCGTTCACACATGCATTTCTAAGATTTATATCCAAACAG-CATATGGTATTTACATGCAATGGACAGATTAGAAAACCAAATTCGAACCTTGGCTGCGGTAAGACTATGTTTTGTTCCACATTAAAT-----ACAT-AGTAGTCTTA-CCTCCTCCTTTGAACACTTACAGTGAAAGCCCACTCTTCTGCCTTGGAAGGAGTAAAAAATTGCATTGGTAACTGCTCAGGAGCAGCAAGGA--------AGGACACTGGAGACCTGAGAGAGGAAT---GTCACACTTGGGTACTAGCAGGAATACTC-CGAGT---------------AACAGAGGTTAGCAAGTAGTCCTAAGAGCGCGGTCAGGCGGCTTTGACTTACAGTTG------------------------------------------------TCTCTG-CTATATAT-----------------TTATGTTGCC-------------------TTTTGTTTT--------------------CTTGTTTTTAGTAGGAAAAAAACTTTGGCCCTTGTAGGTGTGATTCTTTTTTTTGTATT----CATGGATACTTATAAAACACGCATGAGCTGTTCAGCCAGCACCT---CTCTGTACTTCTGG--CCACCCCACCCTCACTTCTGT----TACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAAAGGGGCACTGGAAAATAAATACATGATTTAAAACACGAAGAGCTAAACTTGTCAGGACAGGATGGTAACAGGTAGGGGAGGCCACTCCATTATGCT--ATGTTTACATGGAATACCAAA------------CGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCA-CAGAGGGATGGTATTTGG-GTACAAAGCACCCATTACTTGAGACCCCCGAGTCTGTCACCAAAATGACCTAGCCTTCTATCGAATTTGCTCTGGTTGGAATCTGACTGGGTGGGATTAGAAGATGAGCCCGTTGGTGTATCTGCCAGGATCTCTATCTCCTGGCTGCCATGACAAGGCTTTGGCTGCCTGTGTCAGTATGCCTGACTCAGTGACCAGGGTCTCACTCTCCTTGCCAAT-GGCTG s bosTau2.chr29 4289121 1151 - 45822729 CCTTATCAGTATAACAAAAGAGACAGAAAGCAGTCCTGTGGT---------TAATGTTTTTATTAATGGTAA--------CATTCATAC-TGCGTATCTAAGATTTACATCCAAAAGGGCACCTTATATTTACATGCAATGGCCAGTCCAACATAACAAATTCAGACCACAGCTCTGTTAAGACTATGGCTTGTTCCAAATTAAATTAAATACATGAATACTCTTAACTTCCTGCTTTCAACATGTACAGTACAAACCCAGTCTTCTTCCTTTTAAGGAATATAAAATTGCATTGATGACTGCAT-GGATTAGTGAAAATTACATTTGAAATATTTAAAACCTGAGAGACAAGCCCAAATAGGTTTGAGTGCTAACATGTCTGCTCTCGAATTCACCCGTGAATCATAATACAGACTGGTCAGTGGTCAACAGTGCATGATTTGGGGGCCCTGGCTT-CAACTGGAAGCCACGCCTGGCTGAGTCAGGGGGGCTCCCGTATCCCCCGATGCCCCCCTGACTACATACCACAGATGAACAGGATCTTTTGTTGCTATGGTGGTTAGATGTCCTTTTTTGCTTTTTTGTCTGTTCCCATTTCTGCTTGCTTTTAACAG-AAAGAGTCTTTGGCCCATTTAGGGGGGGTT--------TACATCACAACATGTACACGAATAAAATATGCACGTGCCCTGTGGCCAGTGCCTTGCCCCTGCCCCATCGGTTCAGCCTCATCACCAAATCACTGGAGTACAGGACTCTTAGAGACATGAGCCCCACCAGAACAGAGTG-CTCAGAAAAATAAATACATGATTTTAAAAATGGACAGCTAAGCCTGTCATGACAGCCCAGAGGCAGTGGGTCTATTTCACTCCATGATTCTTTCTTTTTGCATTAAATACTGAAGACGATGCAGCGCGTCATCACTTTTTGGTCAATCT--CTCTTTCGAGCAAGGCACACGCATCGGAAGGGTAGGCTGTGTTAAACTCAGCACCCGTCACCTGCGACATTCTAGGAGGTCGCCGAGATGACCCATCTCCCTCTG--------TCTCCCTGGAGACGG---GAGTGGGTCTCCTCTCTCAGCA----GGTGGGACGGCCAG----------CCCTGACTACC----TGAGGTTCGCTCTTCTCAAGTT--TGTTCCTTTCTCAGTGGCCACTGTCCTGTTATCCCTGCTGGCAGGCTG a score=14165 s mm7.chr19_random 1711603 979 + 2598976 TGGTGTCCAACTTGGTAGCCTTTGACTACCAAGCCCCTCACTTCCCTCTGTGGACAC------ATCTGTTATTTTGTTGCTTAA---TGGAACTGG------------TGGCCAATGAGATTCTG---CATCGCTCCCTCCACCAGGGACCTCATCTTCTAGGG---TGGGGG----------AAGTGCTTACTTAGGGACATCTCTATGCAGGAACTTGTGAGGGGAAGCAGCACCCTCACATATCCACCCAAAGGCTTCACATGCTAAGCCTTCTCTATGGCCCCACTT--GCCAATGGGCTCCCATCGTTAAGGCACTGGGTTTCGAAGGTGGCACTGAGGAGGTGGTATCCTGCTTCCAGGAAATGTGGAGTCAAATGTGGACTCCC-------AAAGCGATGGTGGCTGTCATTCATAGCAGAACCTTAATCCCCAGGCCTAACCATTCCATTAGTGTGTTACAGGTGTGTTAGCTAG-AGCTGTTACCTCCACTGGCTCTGAAGCCACTTTCTCTTTCCAC--AAGGTGATGCTCTCACTGCCTGGGTGAAGTCAAGT----------CCCAAGTATCCACAGGGTCACCACTGAGGAAGTCTGTCACC-----TCCAACACATATTGA--TACAACCCCCAAAATCCAGGGATTCACCAGCATTTAAATCCCTTTATCCATTAGGAGCCGATTCAAAAGACTTC--GGGGGACTGTGCCCAATATTCCTGGAGCCAAGGCATCTCTGGATGTAGTAGGGTCACAAGTCAAACGGTGGAGCCTACGGTTGTTCTAGGGAGACCGA--CGGTAAACCTTC--TGGAAGGAAAACTGAGTTTTATAAGAACAATTTTCTGCCTGTCCTATGGTCAGGAGCAACACCTATT---CATTTGGTTTGT-ATCACTAGAGTCCATTTTCCTTCCGTGCGGCTCCGACAG--TTACTTTTTGGAATTGGCGGTGAGGCCAAACAAGGTGATAATGTCCATCATGGCTTGTCTCAAGTGCTTCCCAAAGCGGTGTGAGTCCT--------AAAAGAAAGAAGCCGAA s bosTau2.chr29 4290305 995 - 45822729 TGTTATCCAGACACGCTATCTTCAACCATCACATGCCTTGCTCCCCATTTCTGACACGCGCCCACATCTTTTTTCGTAGCTTAACAATGAAGCTTGAGGAAGGCAGTCTGATGGAAGGGAATCCGGCTCACAGCTGCCCTTGTAAGGGGACTGGTCCCTCTGGGACATGGGGACATGACAGGAAAATCCCTACACAGGGATATCC--ACCCAGGAAATTGAGACGGGAGTGAG-ACACCCACAATTCCACCCAAAGACTTAAAAT---AAATCTCTTGCGTGGCCTCCCTTATGCTTAGGGCCTTCTGTT-TTAAGGCACCGGGTTTTGAAGA------------------------CTTCAA--ACACGGAGAGGCAAAAGCAGATGACCGGACTAGACAGTGAGAGTGACCA-CAGACAGAACAGATTCCAAATCACAAAGCTTGTC---TCGGTTAGTGCGCTGCATGTGCGTCGGCTATTAACTGCTAATATCTGCAACTTAAAAGAGGCTTTTCTCTTGGAAGGAAACAAATGTTTACACTGCTCTGATAAAATTAAGTGCCCGTAAGTACCAGGTGTCCA----GTGGCAGCCAAGGAAGCGTGCCGGTCTGGTTCCAGCGAGTATGAAGCCACAACCCCACTCATTCCAAAAATCGCTTGT---------CCCTTAAGGAATGTAAGGTGATG-GGAAGACTTTAGGGGGGACTTCATCCAATGTCCCCCAGGTTAGGAGCTGCTTAGAAGGAGTAGGGTTATACTTCACGGCGTGGAGCCTGC---TGTCCTAGAAAAGCAAAAACACCAAACCTTCGCTGGAAGGAAACA----------------AATTTTCATCCTGAAATACAGTCAGGACACAGAGCTATTTTTCATTTGGTTTTTCATCAGAAGAACTTCTTTTCCTTCCCAGAAGTGCTAAGAGATTTACTTTTTGGAATTGGGGCTGAACCCGAACAAACTGATGATGTCGGTCATTGCTTCTCTCAGGTTCTTCCCGAAGCGATGCGAATCCTTTCATTTAAAAACAAACAAACAAAA a score=8997 s mm7.chr19_random 1714098 295 + 2598976 AGACTTAAGACCACTGCTACCATCAAAGGCAGGTA-----AATGAAATA-AATATATGTCTTTCAAATGGGTGAAATTCATCGATGTGAAACTAAGCTAA---AAAAAGGATG-ACACCTGAAATGAATGTTTTGGTTAAA-----GATGTGC------------TCCCTCCAAAAAGAAATT-------TACCTCATGTCTAGAAAAAGTAGTGCCCAATATACTCACTGTCTCAGGGCTAGAGAACTTGGAAGAAATATGGAAGTGGATGAAATTCTCTCCCACAATAATGTAGGAAACACCATAGCCGTCATCAGCAACCTGCAGA s bosTau2.chr29 4292837 325 - 45822729 AGGTTTGAAACCACAGCTACCAGCAAAGATGAAGACTTTCAACCAAATACGATGAATCCCTTTAAAACTATTAAAATCC-TTGTTTTGAAAACATCCCAACCAAGGAAGAATGCATAACTGAATTGAAATTTTCTGTTAAATCAGGGATGTGCCCCCCACCCAAATCCCTTCGAAAGAAAATAGTACAAATACTCCAT-CCTGGGAAGGG--GGGACTTTTGTACTTACCGTCTCAGGACAGGAGAACTTGGAGGATATATGGAAATTGATGAGGTCCTCACCGACGAGAATGTACGACACCCCATAGCCGTCATCAGCAACCTATAGA a score=7782 s mm7.chr19_random 1714588 169 + 2598976 ACTTACCGGCCCAAAGCCCCCGCCACAGGACACATAGTCAGGGTATTTCTCAAAGTCAAACAGTTCCACCTGCTGCTGAGGAGTCTGGCTCGTGGACAACCTCCATGGCTCAGACAGTACCTGCGA---CAAAGCAAAAAATGTCCACATG--ACTTCCCTACTCGCTTCTCCT s bosTau2.chr29 4293482 174 - 45822729 ACTTACCGGCCCGAAGCCCCCTCCGCACGACACGTAGTCTGGATTCCTATCCAAATTGAACAGTTCCACCTGCTGTGGAGGGGTCTGGCTGGTGGATAATCTCCAAGGCTCAGCTAAGACCTGGGGAGTTAAACAAGGTGACGTTCTAATGACACTTCCCAGCTCCATCCTCTT a score=11646 s mm7.chr19_random 1716108 241 + 2598976 CAGAAAAGCCAGGCTGGACACACACAGTCCAAGCACTTACCTCCTTCAGGAAAGGTGAGTCGACTGCCAGATACTTGGACACCACATAGAGGCAGAAGAGGTGGCGGTCGATGCCAGCGCCCGTCATGGCGAGGCGGTACAGGTGCTGGTGCTTTTCACAAGCTATCTTGAACAGCTTGAACCTCTGCTCTGCCTAAGGGTCAACAGGAGAAGGACATGCTTTGCATGGTTCAGGTTGTGC s bosTau2.chr29 4295050 225 - 45822729 CAAGAAAGCCGAGTGGGCTGCACAGA----AGGGCCTCACCTCCTTCAGGAAAGGGGAGTCGACCGCGAGGTACTTGGACACCACGTAGAGGCAGAAGAGGTGGCGGTCGATCCCCGCACCGGTCATCGCCAGGCGGTACAGAAGCTGATGCTTCTCAGACGCGATCCTGAACAACTTGAGCTTCTGTTCAACCTGAAA--TAACA----AAGGACAGGC------AGTTTCAAGTCGTGC a score=10584 s mm7.chr19_random 1717793 182 + 2598976 TGTTCTGCCACCATGGT----CTTACCGTTGTTGTGGGGTCCATCATGGCCAGCACAAAGTTGCAGGACTCCGTAGTGCAGGAGCGTACAGTCTCTGTCCTCCCCTCTCGGAAGAGCCGAGTCATGGAAGCCTCATACGTGAGGCAGAACTTGCCCATGTCCTGGGAAGGAAGGAAAACTAGCTTA s bosTau2.chr29 4296868 183 - 45822729 TGTTCTGCCGGCCGGGCGGAACCTACCGTCTGTGTGGGGTCTACCATGGCCAGCACGAAGCTGCACGACTCAGCGGTGCAGGAACGCACGGTCTCCGTTCTGCCCTCTCGGAACAGCCGGGTCATGGAGGCCTCGTAGGTGAGGGAAAATTTACCCATGTCCTGGGA---AAGGAAAAATATTTTA a score=3259 s mm7.chr19_random 1719133 123 + 2598976 CACAGTCCTGGGTGGATACAGAAATCTGACTCAGCCTAGAGCAAT----GAGGAGCTCATAACTTCTGCTTTAAGGAAAGGCCTGTCAAAAGTCAGACACATTAAGCAATTTGTCCTAAGTATTTCT s bosTau2.chr29 3952259 127 - 45822729 CACAAGCTTCTGTGTGTACAGGGACCCCACCCATCCCAGAATACCTCCCGTGGGGCTGCTGTATCCCCTCCTATGGAAGAGCATGTCAAGGGTCAGAGACCTCCAGTTGCCTGCCCTAAGTAGTTCT a score=10149 s mm7.chr19_random 1719662 282 + 2598976 CTGCCCTCCATGCTGGGC------TTTATAGCCTCTGCCCACTAGGGAAACAGCTCC--AGAGTGCCCACAGTGAGTGCCCT---------TCTTACCTTGTAATGTGCGAGCTGCAGTGCCAGCTGGATGAAGGCATCGGGACTCGTCCGGCACTTCTTGATCAAGCCTTTGCCAAAGGTGTCAAATGGGAAGGAATGCAGGTCCACATCATTTGCCAAAAAACTGGCACTGCTTAGGGATGTCTCTATGACCTCCTGGCAC-TGCAGAGGAAGAAGGCA--GCTCTGCTTAGTGGGGAAG s bosTau2.chr29 3952544 292 - 45822729 CTCCCCTACGCGCTGGGCGGGCAGCCTTGGGCCTGTGTTCA----------AGCTCCCAGGAGTGCTCAGGACAAAAGGCCCAGCTGGGTGTCTCACCTTGTAATGAGCCAGCTGGAGCGAGAGCTGTACGAAGGCGTCCGGGCTGGTTTTACATTTCTTAATCAGCCCTTTACCGAAAGTGCGGAATGGGAAGGAGTGGAAATCCACGTCGTTGGCCAGGAGGTTGGCACTGCTCAGCGAAGTCTCAATGACCTCCTGACACTTGGGGAAAAAGGAGAAAAGGCTTCACTTAATGGGAGGG a score=9110 s mm7.chr19_random 1721071 168 + 2598976 CCCAGGTGAGTGATGGTC-TCTGGGACACCAGACTTACTTCTCCTGGAATGTCCCACTGTAGCCTGGTGGGTTTGGGGATGTTGGGGTTCTTGTCTCCTTTACAGTGTCCATCCTCTGAGTAGCCCAGCTGGAAGACGTCGGTGGCCATGACATACTGAGACAAAGAAG s bosTau2.chr29 3954387 169 - 45822729 CCAAGGTAATTGACAAGCATCTGAGGACTGGGACTTACTTCCTCCGGGATGTCCCACTGCAGCCGGGTAGGGTACGGGATGTTCGGGTTGGTGTCTCCTTTACAGTGTCCATCCTCCGTGTAACCCAGCTGGAAGCTGTCTGTGGCCATGACGTACTGTCAAAAATAAG a score=8749 s mm7.chr19_random 1724544 308 + 2598976 AATTAGACAAATACTGCAGAGTTCAAGTGGGCCTGCGTTGGGTTT-CTTTCCCAA-AGCACCTTCCACATTCAGACAGGTAACAATGGTGTGGCTCACCTCCCACAGATGGCCCACGATGGGCGCGTCCGCCCAGGAATGCTCTGCGTTTATGCCTATCTTGCTGTTTTTGAAGACAACAAAGGTGATGGACTTGTCAAACCACCTACAGGGAGACAACATGATCATG-GGCTTCCAGGGTTATATCGACATGGGAACCCAAAAGCTACATGGGTGCTTCTTTCTGCAGAGACC--GTTGCTTCTCTCCACCC s bosTau2.chr29 3957508 305 - 45822729 AACTGGACGGATACTACCAAGTTTAATTCAGTCTG----GGGTTTGCTTTTTCAATAGCAGTTTCTATGGTCA---AGTTAAACTTTCAGACACTCACCTCCCAAAGGTGACCCATGATGGGCGCATCGGCCCAGGAGTGCTCCGCATTAATGCCCATCTTTCCGTTTTTAAAGACGATAAACGTGAATGATTTATCAAACCACCTGCACGACACAAAAATATTAATGCAACTGGCACGTTTACAAAGACAAAGCAAATCCAGA-CAATGTGTTTGTTTTCTTATGGATGGCCTCAACTGACTGTATCCACCC a score=15006 s mm7.chr19_random 1725199 432 + 2598976 AAGGGTGGTGGGTAAGCAAAGGAGGGGA-CCTCAAAACTACCGGGCCTACAACTGTGTCTGA--GTTTGTGTGGAGGGAAGAAAGCAGAGCTTTCTGGTTGGATGCTTATTCCTTCCT------AGTACAACCCCATAGCAGGG-GTCAGATTTGGG-GAGGCTGCTCACAGGTACCCCCAGAAACATCTCCCACAACCCCCCATCAACCTCAGAGATTAAAAATGGGAGTTACCTGTCGAAACATCTACCATGCAGCAGAGATTTGGCATAGCTGTCAATAGATGCCTCAGGGTCCTCCTCTCTATATCCCTGTTCCGATTCGTCCAACGTCACGAAGAATGCTGCCTTTTCTACCGCATCCAGAGATTGCTTATTTTTTCCTCGTGCAAAATAGGTCTGCCGACACTTCGCCCAGGGCACTCTGTGGCAAGGAGTAAACGC s bosTau2.chr29 3958929 415 - 45822729 AATGGAGGAGGTCATGCAGAGGGGAAGAATCTCAAGGCTGCTG--CTTACGTGTGTGCGTGACAGTTTGGGTGGAAAGAAGAAA------CTCCCCAGTCATATTTTCACGGCCCCCTTGCTTCAGCGGATGCTTACGGCTGGGTGTCAGCCATAGGCAATGCTTCTTCCAGGT--------------TTCAGGCAAAGCACTGT--GTTTCAGAAGGTAA----GCGCGATACCTGTCGAAACACCTGCCATGCAGCAGGGACTTGGCGTAGCTGTCCATCGACGTTTCCGGGTCCTCCTCCCTGTATCCCTGCTCGGTTTCGTCTAACGTCACGAAGAACGCTGCTTTTTCCACGGCATCCAGAGACTGCTTGTTTTTCCCGTGTCCAAAATAGGCCTGGCGACACCTGGCCCAGGGGACCCTGCGGTGAGGATTAAGTAC a score=14399 s mm7.chr19_random 1727260 212 + 2598976 cacgcacCTGTCTGCGGCAGTGAGGGCGGCAAGCTTGGCTTCCCCGGGCTGCGGCTCTGAGGTGTCATCCAGGATCTGCTGCATCTGCTGCTCCAGCTCACGGGGCCTCAGCAGCCTCCCGTCATGGTAGAGCCAGACCTTGAAGTAACGGCCTCTGTGGTACACGACAATGTGCCTGCTGTCCTTGACGTGTTGGATGGTGTCTGAGGTGG s bosTau2.chr29 3962010 212 - 45822729 cgcacacctgtcCGCCGCCGTAAGCGCCGCCAGCTTGGCCTCCCCGGGCTGCGGCTCCGACGGGTCCTCCAGGATCCGCTGCACCTGCTGCTCGATCTCGCGGGGCCTCAGCAGCCGGCCGTCGTGGTAGAGCCAGACCTTGAAGTAGCGGCCCCGGTGGAAGACGACGATGTGCTTGCTGTCCCTCAGGTGCTGGATGGTGTCTGCGGGGG a score=10803 s mm7.chr19_random 1729738 421 + 2598976 AAAGACAAAGCGATTCCAAGAGGAGGAA-------CAATCAGAG---TCAGACGCTCTTGGGACAGACCCTGTAG--ACCATTCTGTTCCCAACGTTCCCCAACTATTCCTGGTTCCGAGCAGCAAAATGGCAAATGCTGGCTCCCAGCGGAGACCCCAGTAAGCACTACCCACCTGTCTCCTCCCCAGGGATGCGGGAAGTATTGAAGAGTCGCTCCCACTGAGCAGAGCAGAGGGGAATTGTAGATCCCAGAAGACGAATCTGTAGTAAAAATGTGTTTTAAACCAACAGGCAAAATCCCAGAGGAAAGCTTTGCAATGAACTGATTAAAATGC--GGTTTGTTTCCTGTGCACACTGCCCAGTCTGACCACATC-----ACTCAGCA-----------TCCCTAGGGTA----GCACCTGGGGGACTTGCCGAGCAGGGCCAGGCTACTGAA s bosTau2.chr29 3962808 428 - 45822729 AAAGACAAAGGCAGTTCAACAGAAGGAAGGTTCTTCAGCCTGAAATCTCTGAAAC-CTTAGGAGAGGCCTCG-AGCCACTGGTGTGGTC------TTCTCTGATGTCTCCTG------AGCACAAGGATGGGAAGTTTTGATTTCCGAAGGAGCCCTGAGTGGGC--TACCCACCTGTCTCCTCTCCCGGGATCCGAGAAGTATTAAACATGCGCTCCCACTGGGCGGAGCAGAGCGGAATCGTAGACCCCAGAAGAAGAATCTGTAACAGAAATATGTCTCAAAC-------AAAAATTCAAGGAGCAAATT---AAGTCCACACATTTAAATGCTGGATTTGTTTTCCGGGCCCATAGCATGGCTGGACCTAATCTCCAAACTCTGTAAGAACGGGGGTTCCCTGGGATACCATGCACCCTGGGG-TTTGCTGAAACAGACCAGAGCACAGAA a score=6442 s mm7.chr19_random 1730517 129 + 2598976 AAAGGCAAGTTG---ACATACAGGTTTGAGTTCCTCACGGTCTACCGTGCGACGATACAGCAGTATGGCGTGGATGGTGTTGCCAGCTCTCGCTGCCTGAATATGGGTTGGGGTGATGTAGAGCATCTCCTG s bosTau2.chr29 3964818 132 - 45822729 AAAAGCACTTTGCGTGCATACCGGTTTGATTTCCTCCCGGTCCAGTTTGCGTCTGTAAAGCAGGATGGCGTGGATCCCGTTGCCAGCTCTTGCCGCCTGGATGTGAGTCGGTATGATATACAGCAAGTCCTG a score=7900 s mm7.chr19_random 1731631 213 + 2598976 TGGGCCCCAGGT---GGGCTCT-TCACAGCAACATGAAGACTTGGACAAAAGAAGCAGGAGCAAGAG-------GAGCTTTCCCAGGCCACCCA----GCAGGACAAACCCATCTTGGCTGCAGTGGGAATGGAAGACCA------------ACTCACCATGGCGTAGTAGTTGCTGTTAACCATGATCGGCCCTCGGCCCCGCAGGTAGATGTATTCCTCCCACCAGTCACTCACCTAT s bosTau2.chr29 3966475 240 - 45822729 TGGACGGCAGGTCCTGGGCTCCCTGACGGGGGTGTGAGGCCTTGGGTGGGGGAAGCAGGGCCAGGGGAGGCCCAGAGCATCCCCAGGCAGCCCGCAGGGCCGGGCCGGGCCACCTGGGGCCTGGTCTCCACCGAAAGCCACGGGCCTGCGGGACTCACCATCGCGAAGTAGTTGCTGTTCACCATCAGCGGCCCTCGTCCTCGGAGGTAGATGTATTCCTCCCACCAGTCGCTCACCTGT a score=11526 s mm7.chr19_random 1734087 175 + 2598976 TACTTACATAATTTGTGGCCCACCAGGATTTTAGCTTCAAATACCACTGCAATTTGGGTCCAAGGTTGACAGCAAAATCCTGGGCCAGTGCTGTCATGCGTTGGAAGTCTCCCTCCTTCATCAGTGGCCTCACAGACTCCAGGTACTGG-----AGAGAGAAAACACGGGCAGAGTTAAA s bosTau2.chr29 3967738 180 - 45822729 TACTCACATAATTGGTAGCCCACCAGGATTTTAGCTTCAAATACCACTGCAATCTTGGTCCCAGATTGACAGCAAAATCTTGTGCCAGAGCCGTCATCCGTGTAAAGTCTCCCTCCTTCATAAGAGGCTTCACAGATTCCAAGTACTGGGGTTAAGGGAAAAAACATAAGCCCAGCTAAA a score=14585 s mm7.chr19_random 1737969 811 + 2598976 AGTCACAATTAGGCAGAAACATGGATCCCAAGGACACTGGCAT-------------CTCAGCAGGAGTGTGGATAATACCTACCCTGCTCACGGTATCTTTGACAGCTGGGACAGGCAGGCGCGGCAGAGACGTCTGGAAGCTGTACAACATGGGCTTTCGACCCGAGAAGACCTTGACCATAGCCT------GGAGATACAAGTTACGTTTTCAAAGATGAGGCTGTGTTAAAGAACCAAAGCCAGGGTTCAACTGCGTTTGACTCTC-------TGAGTGTTTTATGACAG-AGCC-----------ATCCCTGGTCTACACCATCAGGCTCCGGTCCCACCG------AGAGCTCAGCTGAAA---------AGAGAAGTCTTCTGGTGTGGCTGCCTACTGTCCTTCCCGA--------------------------------------------TTCTGCAGGAGGG---------CTGTCTGCCTCCTCCTGGAAGGTCCTTGATTTGAGGCTGGTGCCCGCTCTGCACATAGGGAGTAGGATCAGCTGAGGTGCCTGACCCTCAAGCCACCCCCAGGGGCAGCAGTGTGTCCCTGCCCATCAGGTCA---AGCAGCCTAGAGAGTGA---------GCTCCCCCCACAGCCTGTAGGAAGATTTTGCAGGCCAGCTATGGAAGGCAGCTGCCTCCTGCTGGCAGGAGCTAGGGCATCTCTAAGGGTTCA----------------AGGTGTAGT-CGGTGATTCTCATTTGCGATGCTCAGGAAGTGCTGGGACTCAGCTCAACAGCAGCCAC-AGGGCCATCCTAGA------------------------------GGACACTGTGTTAA------GCCTGTTGGTTAAGTTTTGCTACTCTAGACATTAAAAAACTAATATATA------AGGTGGAAGCTGGTTTGTGAAAGATGGAGGCCAGGAGT-GCGTGGTGGGC s bosTau2.chr29 3968755 952 - 45822729 agtctcATCAAGTCATAAGCCTTGATGGCAAAGATGCTGGTGCTCAGAGCAGGTGACCCAGAGGCAGCGTGAAGCCGACCTACCCTGTTGACGGTGTCCTGGACAGCTGGCACGGGCAGGCGCGGCAGAGACGTCTGGAAGCTGTACAACATGGGTTTTCGGCCTGAGAAGATCTTGACCATAAACTAACAAAAGAGAACAAAGGTATGTTCTGAAAGACGAGATTGTGTTAAAGGCCCAAAATCAGTTTTTCAGTGTATATGACTCGCCAACTGTTGACTGCTTCTCCACTGCAGCTCATCTCCTTCAATCCATTTTCTGCCCCAACCCCCGCAGGCCTCAGCAAACAGCAAACCCCAAATAAAACCCAGGGCGAATGAGGCCCTGTGTCTGAGACACATCCTGCCCTGTCCAGGAGGTGCCATTCCCTGGGCACCCTGACACGGGGTCCGATTGCACTTCTGCACAAGGGGATTAAGTTCCATGTGCCTACTTCTGCAAGGCCCTCGGTTT----------CCAGATTGGCAC-CAGGGGCTGGG------TGAGGGGCTTGGACCCAGAAGCAAGCTCAGGAAAAGCAGTGGGACCC------TCTGGTCATTGACAAGTCTGGTGAAGGGCACACACTTGCCCCTGCTTTAGTCTG--GAATGATCT---AAACATGGTCTAGTAATTGGTCACCTCATGCTGACCTGACTTCGGAGAACTTCTGGGGCTCATGGCAGCAGTGGGGTGGGGGGCAGTGCTGTGATTCT------TGATGCTGAAGAGCAGGTGGGACTCAACTGGACACCAGCTATGAAGGCCACCCTGGGGCAGGTCATTTCTCTTGCTTAATAAAGTGTGGACACCACCTCAGCATCTCTCCTGGGAGTTAAGTTCTATTTCTCTGGAAATCAGAAATCTTACATGCAAGCAACAGCAGGAAGTCTGTTTGGGAAAGAGGAA----AGGTGTGGTGTGGCGGGC a score=12512 s mm7.chr19_random 1739824 232 + 2598976 TTACCATCCAGATTCTGGTGCTGCGGCTCATTTTGCCGTGCTCTGCAAACATCCAGCCATGGTAGGAGAGCAGCACCTTCAGCGAGTAGCGCATAGTCATGATGATCGCCACCCAGAGCCCTGTGCCAAAGAGGACGCCACTCACGATGTTCTTCGTCTGGCTTGACATGCGGCCACTG-TGAGGATGGAGCAGACAAGGAGCTAAGACGTCAGCATGGAAGGTGGTAATGGC s bosTau2.chr29 3971425 230 - 45822729 TTACCATCCAGATCTTGGTGGTGCGGCTCAACCTGCCGTGCTGGGTGAACATCCAGCCGTGGTAGGACAGCAGCACCTTCAGGGAGTAACGCATGGTGACGATGAGGGCCACCCACAGCCCCGTGCCGAAGATGACGCCGCTCACCACCTTCTTGGTCTGGCTGGACATGCAGCCACTGCCGAAACAAGACCAGACAAGCCGCGGGTTCATCAGC---GAAGGAAGCCACGGC a score=6398 s mm7.chr19_random 1742138 168 + 2598976 CAGAACAGCCCCTCA--------------GGCTGCAAGTCTCTGAGCCTTCACCTGACCTTTCTAAATTTGAGCCAGACATGACCCAGTTTACGAAAATAGAGTCTAAGGGACAAAGAAACAAATCGTATAAAGACTGAGATTAAGCAAGGTTTT-AGTAGCTGGCGTGGCTGTGTGCAATCC s bosTau2.chr29 3973619 177 - 45822729 CAGAACAGCCCTTGACCCTTGACCCTGGGAGCTGCTGGCCTGTAA------ACCTGGTCTTTCTAAATCTGGGCCAAGGATGGCCCAGTTTACTGCAATTGGTTTAGAGGGATGAAGAAACAAATCTTATAAAGACTCAGATTAGAAAGGGCTTTAAATAGCCGACACTTCTAAATATAATCC a score=12199 s mm7.chr19_random 1743229 620 + 2598976 TTTTTAAGTTCCCAGAATAAACTAAAA-CTCAAAGCCAAGGAGTAACGCACTTCCCTGCAGGCATCTAAGCCACTGTGA--AGGGGCCAAG-GGCTGAGTTGTCCCTA-AGCAATGACCGGCAGTAAGTTCAGAGGACCAGATCACT---GGATGGACCAAC-TCCAGGGCAACAGCCACACTTGGAGCCATCTTCTGGGGCAGAGATGCCCTCTGAGGTCATCACTGTC--TCCATCTTGACCTCAGGAGACAGACACCT--GGA---AGGCAGGTCCCCGTGCCTCTGCCACTCTTAGCCTAGTCTTCAGAAGAAGGGTGGC-AGTGTCTGCAGACTTTCAATAG--------CAGGTCAGGAGGGCAAAGAGCATGCG-GAAAAACAGCGATAGCATAGTTG----TACTCAGA--------------CATTT-------CAGAGCGAGGACAGTCAACAGAGGTACCACCATCTTCTTCAAGATGCAGAGGGTGGAGGTGGGTTACTCACGTGGTGTCTAGGGTCCGATTGATCTTTGCAATCATGCCCAGGGAGGGGTCCACTTTGGTATGCATGGATGATATCACACCCACCACCACGATAAGCCAGCTGGAGGGACTCGCGGGGAACACACCAGTGATGATGCCATTCTGGAAAGACATGTGAG s bosTau2.chr29 3975962 645 - 45822729 TTTTCAAGCTCTTAGAA--AACTACAGTCACTAGGATAAAGTGTTGGGGG-TCCCCCCCGAGATTCTAAGTCACTCAGACAAGGAGCCGAGTGGCTGAATTCTCCCCAGAACCCCCAACAGCAGTCAGCTCTCGGAGTCCTACAACTCCAGGATGGCCCCGTGTACAAGGAAGACACCATGTCCGGAAGCAGTGCCTTGGACAAA-ATTCATTCTGAGGGCCCCCTGGCCAGGCTAAGTGGGCT------GGCAGGCACCGCAGGATAGAGGCTGCTCTTCACACCTCTG--------------GGCTTCAGAGAAGGAGTGACCAGGGACCCCAAACTCCCCAGGGGACCTCCCCAGGACATGGGGAGAAAGCTGTCGTGAGAATCATAGCAAAAGCCTCAAAGAGAATACCCAGAACAGACCGTCCTGACATTTGAAAAGACAGAAAAAGAGCAGCCACAAAAAAGGCAGGCAT-TCCCTAGACCCTCTGAGATTTGAGA-GGCTTACTCACGTCGTGTCCAGGGTCCGATTGATCTTAGCGATTATTCCCAAAGAGGGGTCGATCTTGGCGTACATGGTCGACATCACGCCCACAACCACGATGAGCCAACTGGAGGGACTCGCTGGGTACACGCCGGTGATGATGCCATTCTAGAAACAGACGGGAG a score=11028 s mm7.chr19_random 1746900 233 + 2598976 GACACATTCCTTCTTCAGCGGGACCCAGGGAGGT---GCATGCAAGCAAGTGCTGCAGAGAC--GATCAACCAACT---AACCTTGAATCGGATGAACTTCTTCTTCCAGGAGTGCAGCCCTGACAGGCAGATCTGTTTGAGGGCTTCATGGCTCAGGCGGAGATCGATGCCATCAGGGGTGACTGTGAACTGGAAGGCCACAGCTTGGTGAGCCTCTGCCATCTTGAGTGGTGACCTGGA s bosTau2.chr29 3979304 241 - 45822729 GGCACACTGAACCTTCAGTAGAGCCTGGAGTTTTCAAATAGGAAAGCGAATACGGTACAGATTGAAGCAAGTATCTGGAAACCTTGAATCTGATGAACTTCTTCTTCCAGGAATGAAGACCAGACAGATAGATCTGCCTGAGGGCCTCATGGCTCATCCGGAGGTCGATCCCATCTGGAGTGACTGTGAACTGGAAGGCCACGGCTTGGTGGGCCTCCGCCATGGTCAGCGAGCTCCTGGA a score=2436 s mm7.chr19_random 1749574 45 + 2598976 cagaatgagaTGGTATCAACTGTCAATCACTTGTCCATTCAACAA s bosTau2.chr29 3982309 44 - 45822729 CAGAACAAG-TGATCCCGGCTATCACTCACTTGTCCATTCAACAA a score=3028 s mm7.chr19_random 1750822 154 + 2598976 tctccccagctcACAAGGGGGTTGTTAACAGCAGTGGATTAAACACAGTG--------------------------------------------TTGCAATTAATTCTATCCAAAGTCATGAACCCCATGTTTGCCCGGAAACCAAACCTGGTCTCAGGACAATCATGGGGC---CTGGGAATATTTATGGTGTCCTTTCC s bosTau2.chr29 3983774 194 - 45822729 TTTACTCAGAACAGGAAGGGATTACTAAAGGCAGTAGATTAAATATAGTGTCGaaaaaaaaaataaaaaaataaataaatataGTGTTGAGTGTTTGTAGCCAATTCTCCCCAAAGGTGCATGCCCAGTGTGTGCTCGTGGATCTAACCC--CCTCTAGACA-----GGGGCAGACTGAGTGTATTTGCAGCCTCCTTTTC a score=5559 s mm7.chr19_random 1756716 136 + 2598976 CCCCAACCCCCAGCCAA-AGGCGAAGAGACACCT---------TGCTGTCCTTATAGCAGTCTAACCTTATAGGGTTAGGGCAG--------TCATTTGTTCATCCTAGTTTGATGCCTGGCTTGGTGGCCAGAGCTGCCCCGTGGCACAGGCA s bosTau2.chr14 32294260 145 - 50711261 CTCCAACTCCCTGGCAATGGGCAAAGAGGCACCTGGTTGGTGGTGTTGCTCTTATATCAGTC---------AGGGGCAAAGCAGATGTCTAGTCCTTTGTTCATCCTAGCTTGATGCCTGGATTGGTGGCCAGAGCTATTTCATGCCTGGGGCA a score=7414 s mm7.chr19_random 1762668 564 + 2598976 catcagcttgttaaattctaactacaactctaattaatgaatccccggttgtc--cccattcactgacgaggaaaacaagactcagatgtc-aaacgcttgcgtaaggtcatagctagccaactgtaaagc-aggaatcaggtccaggctcagctccagtgggcatgtccttaCCTTCCAAAGTGCAGTAGCAGCTGTGACA-GCAAAGGCTAGCAAAAGATTCCTGCAGTTGCAACACACACCAGCTTACGTCACT--GCTGTAGCCAAAATGA------------------TAGATGGTAGCCAACAGGAAAACT--TGATTACTA-----CAAACTCGGACCAAG----------------------------GCTAATGACTCTTATCAGT---------------GTGACCTAGGTG-------CCCACCAG----------------------AATCACATCATTCATTGCCAGGCAGACACAGGCTCTGCCTGCAGCTCTAATCCCTCACCAGCTGTCCATCTTGACTAGCAGTAAACAACCT--CTGGAAATCCTGAGAGAAAGGGTTACCCACAGGAAGTGGCACCTTAACA------GAATT--CTAGGCAGGACATCCAGGAACATGGCAGGCATCCCTCACAAGGAACAGCACCAGGCTGATGAAC s bosTau2.chr29 3989592 621 - 45822729 cattaacctatttaattcccaccagaatccta------ggatatactgatgccatctcatttactaa------gaccaaggcttggaggtctagaaacttgcccaaggtcacagttggcaaacagcaaagctgggaatcaggcccaggtccaactcca-----------------------AGTTAAGTGGTAAGCACTCCGTACAAAGTTCCACTTAAGATTCCTAAAGTTACGACACAGAAAAA-TTAGGTCACTCTATCGTAAGCAAAATGAGGTAACTTCAACCAGCAGTAGAAGGACAGTAACTGCAAATGTGGTGGGTGCCAACTCTCAAATTCTTCCCATGCTCCAGTATTCCCgctgctgctgctgctgctgctaagtcgcttcagttgtgtctgactctatgcgaccccagagacggcagcccaccaggctcccccgtctctgggattctAATTGCACAATTCACAAGCCCAAAGAGGCAGACCCTGCCTTCTGTTAAAACCC--------------ATCTCATCCAGCAGCAAACAACTGAGCTAGAAATCCTCTGAGAAGAGGTCACCCCCAGGAAGCGATAGCTGAGTGCAGGATGAATTCACCAGGCAGGGTCTCCAGGTGCATAGCCAGTATCCCTCACCAGGGG-------AGGCTGGAGGAC a score=2115 s mm7.chr19_random 1763263 66 + 2598976 CTGGGATCTAACTTCTGGGAGCGCTCTGCTCCGCTAAA-------------------CAGAAATGGCTGTAACTTAGAGAGgctg s bosTau2.chr29 3990694 85 - 45822729 CTGGTAACCAGTGCCTGGGAGGGTTCTGCTTGGCTACACAAAGCTGGTTCTGCCCTCCAGGACTGGCTCCAACTTGGGGAAACTG a score=3722 s mm7.chr19_random 1764531 213 + 2598976 TCACCC-TGAAAGGTTAAATTTGGAATTCATGCCTGAACAGT------CTTCATT----------TGCATTATGTAATTTAGCCCTA-GGTGACTTTCCCACATCATGGCATATCACCATAAGCCATTTGTGCTGTTTGGCTGAACACAATAGTTCAGATCAGGTTAGAAAACAAATTCTGGTCTATGGCCATATCATTCTATTTTATTAT-TAAttttttaaaaaagattt s bosTau2.chr29 3991476 220 - 45822729 TCACTCATGAAGGGCTACATCTTGAATTCATGACTGAGCACTGaataaccgcattatttaataactgctttatttaaACTGGCCACATGGTTCATTTCTCACAGTGAAGTATATCATAATAAACCATTCACATTTACAGGGTAAAGATGCTGAGTCAAGGCAGGTTACAGGG-GAATTCTG-----------CATCATTATCCTTGTTTCTATGACTTTTGATAACAGATTT a score=3711 s mm7.chr19_random 1767101 229 + 2598976 ctgaggTCTCACTCCTTAATGGAGTCTCCTGGGACTCAAGGGACACAGGAGAGCAGGTATCAGAGCTGCCATTTGACAGAGAAGGAAATGAACACCCAGACATGCCCGCA----CTTCGATATCAGTCTAAGTCTGCATATATAGAGGTGATGGCTGCCACTAAGAGCCCTGCTCTATGACAGCAGGTGAGAGAGTGGCT---------------------------ACAACACAGATCTGGGTTCA-CTTCCAGATCTGC s bosTau2.chr29 3992839 259 - 45822729 CTCACATCTGGCCCCTTAG-GGATCCTCATAAAATCCCCGTGAGACAGGATGACAGGTGTCAGAGGCACCGGCTTAAAGAGGAGGAAATGCAAACCCAGAAATACACACAGCTGATCCGGTGTCATGTCCAGTGGGCCCAGGGGAGGGGGAGCACCAACACCCAGGCCCTTGAGCTGC-ACAGTGGTCTgggaagcagcctgttagagcacggggcacaagcttcggaaaacacagatggaggttcagattccagctctgc a score=3887 s mm7.chr19_random 1768204 118 + 2598976 CAGTCCAGCGGAGAAAGGGCGCCCCAAACCTGTCCTTCCTTCAGCAATGATTTGCAGGCCTGCATAGGGTCAGGGAGACTG--AGGAAGACAAATTCTAGTGGGACTTAAGAAACAGAAG s bosTau2.chr29 3994299 112 - 45822729 CAATCCAGGGAAGAAAGGGA--CTCAAACTTTCCCTT------GCAAATACCTGAATGCCTGCTCTGGGTCATGGAAATGGGGAGGAAGGCAAGTTCAAGAGCCATTTAGGAAGCAGAAG a score=9549 s mm7.chr19_random 1769471 379 + 2598976 TCTCTTACATTTCTACCTAAATGG-TCGGTGTGCAACACTC------------CTCAGAGGCAAGGTCAGTAGCCATCCTATTTCCCAACCTTCTAAAGTGGCAGTTACCCAGGTGTCGGGGCGCGAAACGGGCAGTGTGCCTGCTGCTATTAACTTCCGAAAAACATTCCTGAAGGTCAGAACAACTCGCACAAAAAGGGCAAAGGGT-------GGGCACTTCTCAGAACCAGGCTGCCACGTTACCTCAACAGAGCAAAGCTGGCCTTAGCCCAGGGCCTG-TGGGGACCCAATGTCCGCCTCAATATTTGCACGGGGTTCAAGGTGAAGAGTACAAAAGGCAACAGA--TATTTGAAATCAACAAGGAGAACTCACTCC----TTGTGTTAGGTAAGAGATT s bosTau2.chr29 3994507 377 - 45822729 TTTCTTTCTTTTCTGCCTAGAGAACTTGGTGTCCAACGATCAGCTGATAAGCCCTCAGAAGTTGAGCC--TGGCCGCCCTGCTTCCCAACCCTCCAT-GAGGCCATTGCCCTACTGTAC-----CGCAAC--------TACTTTCAATTATTAACTTCC-CGAAACATTGTTGGACATAAAAACAACTCATGCAAAAAAAAAAAAAAAAAAGTAAAGGGCATTCCACAG----------TCACCTTACCTAAGGAGGTCAA-GTTGGCCTCAGTCCAGGGCCTGCTGGGAACGCAGTGTCCACCT-AATATTTGCTTGGGGCAAAAGGTGAAATTCACAAAAGGCAGCAAAATAATCAGAAATCAACAAGCAGAAAATATTCCTTATTTGTGTTAACTAGCAGATT a score=17304 s mm7.chr19_random 1770476 979 + 2598976 AGTCTGCTAAACACACTTTAAAATTATCCACCTTGGACTACCATTTTATTCT--AAACTAG---------------TTCAAA-TGCAGACTTCCACCAGCTTTAAGACTCGG----GCCTACCGGTAAATATCTATGAAGAGTGACTGAAGAGTGACTAAACATATTTTCTAACCAAAAAAAAAAAAAAACCTTCAAACGGTCAAAGTACAGGAAAGTCGCGTGGC--------------------------------TCTAGCCGCCTGCAGA-TCCAGACTGCAAGTTCAAGG---CGCTGGGGAAGGG--------AAGGGCACTAACAACAGCGG-CTTCCCGCCCCGCCCCTTCCCCTACCCAGCCGGGTCACGTGACGGCTGAGAAAAGTAGGGGAAAGGTTACGG-GTGCCCCGCCCCCGTGCTGGCGCGTCCGGGGCGCTCGGATCCTGTTCCACCGGCCGAGCCCACGCAGGCCTTCCGGAGCGA-------CGCGTCGC---CGCTGCCATCCCGGAGTCACC-----------------------------GATCCGCTTTGTC-----CGAGGACAGCTG--------------TCGCATACAA--CAAAACAGCCAGCCGGCACCGTGCCTC--------------------GAAGGGTTTCGCTGCGAAACCCAAGGGGAAAATAAAGTAAAAATTGCAGCGCTTTTATGAATGGGCAAAATGGGCAAGAGGAATCAGGGTTGGCTAAACCCCGGCCAGCGCCCCA-AACTCCCGAGAGAATCAGGCCTGCCGGTTTCGTGACCACTGGGTCAGGGCCAAGCGCAGCGGCGGCGGAAGGGAGGCGTTCCACCCCTCATCTGCAGTCAGGTGGCTTTCTAGCTCAAACTCGAAAGG---TTTTGTCTTGTGCAGGAAG-CCGCTTCGGCCACTTTTGATACAAAACCTAACCGGAGCTTGA-----------TTCCAAAGACGGTTAAGGAGTTCaaagccgggcgtggtggtgctc-gcctataa---------tcaccgcacttatgggtgggtgcaggaaggagatcgggggttc-------aaaaccaaccttggg---tacagag-----------------caggctggagggcagcctgtgttacatgagatcctatctc s bosTau2.chr29 3995123 1093 - 45822729 AATCTCCGAAACACACTT-GAAACAGACCAGCTGGAACAACAATTTTCTTCTTAAAAGCAGCAATTTTTTCCGGAATTCAAAGTGCAGGCTTCCAGCGGCAGCTGCACTCGGTCGGGTCTGCCAACAA-CAACCATGCAGAGTGACTAAACAGTT----------TTTTCCAACAAAGGAAAAAA-------TGCATCCGATCAAAGTGCAGAAGCAGCCCGAGGCCCGGAGCGGGAGCGCGTTTCCGCCTCCCACCTTCCCACCGCCTTCAGACTCCAGGCTGCGACTTTAACTGCTCGCTTGGAAGGCGTCCTCCCGGCCGCCGCCGGCAACTGCGGTCGGCGCGCCCCGCCCCTCCCCTCCCGCGGGCG--TCACGTGACGGCTGAGAAAAGTAGGGGAAAGGTTACGGCGAGCCCCGCCCCCGGCCTGGCGCGTCCCGGACGCGCAGATCCTGTTCCACCGGCCCGGCCCACAGAGACCTTCCGGAGCAATCTGGCGCGCGTCGCCAGCGCTGTCACCCTGGAGGCAGCAGGCGACAAAAAGAGCCTTTGGGTGGGAAGGCCTGCGTGGTCAACCTTGGGGACAGCGGAGAGCCTGGTGTCCCCGAAGACAACCCACGTCAGAAGGGCGGCGCCGCGCCCAGAGAGCGCAAGGCGCCTCCGGAAGGGGCTCACCGCGAAGCCCGAGA------------ACAATTAACGGTGCTTCCATGAACCCGCGCGCGGGGC---------CAGGGTTGCGTAAGTCCGCGCCCTCGCCCCAGAACTCCCCAGACACCCAGGCTTGACCGCTCGGTGACCACGGGCCCGGGACTAAGGGCGACAGCGACGCCAGG--TGCATT---CTCTTCACCTCCTG---------TTTTCAGTACAAACTCGAAAGGTTATTTGGGCCGGTGCATGACGCCCATTTCTGCCA-GTCTGATACAGAGTGTGTGCACGGCTCAAGGTGGCCCTTTTTCCAA------TT------CTCACAGCTGTTCAC-GTGGAGTTCAGCATTCAAGATCAGATCTCGCCACACATCT---------TAGGAAGGAAACCGGTCATTTACATACGAAAAGGAGCCCTGGAGCCCGCAGAGGCAGAACCACCCCGAACTCGGCAAGAATGCAGCCT--------CCAGTTCCTATCAC a score=17862 s mm7.chr19_random 1771793 828 + 2598976 TTTTGACAGTGATAAACACGCTTGAATATCAGGAATGACCAGAAACCAGACGCCTGTGCAACAAAAT------------------GCTGTAACTAAATACGCGTTCCGAAAGGCTTCTAAACTCACTTTCATTTTATTTGCGAACTTCCAAAGTTAGCAGTTTCCGACTAAAATCTGTTTTTGGACAACTATTTAAAT----------GCACGGAA----CGAGAGTCGGCCCAGAGCTGAGAGTACTGAGCTTGAT-TGTATGTAGCCTGGTTCACACTAGGAACTTTTTAACTCCT----TAAAAACTTGAGCGTTCATCTGTGTTCTGTGACATCAACGAAAACCAGAC-CCGATTCACAAT---AAGATG------------------AAGAAAAACGAAGGGTACCCGCTGTTACCGCAC----------------------------AGCCTGG---------TTGCCCAGACCGTGCTGTCCGGCTGTCCCAGGCCAAGTTCGCTCAGGCCAGGTCACGTGACGCCCC--CACCCTCCCGGGCTCTG--------------GTCCCGGCGCGACCTTGGGCAGTCTCTGACACCCACCTGCCCTTGAACCCCGGGCAAAACCGCGGTGAGGGGTGCAAAACACT---------------------------------------------------------------TAAGTCTCTGCGCCAAGGGTGTGTCCCGAAGGCTATACTGCAGGGAC--CCGCACGAAGAGAGGGCACCGGCCACCTGCCAAGTCCCCTGTGCGAGCATCCTTCCTACTGCC----GAGCCCGACCCTC---------ACGGACCCCGAGAACCAATCCACCT--GCAGAGTAGCGGGTGGAAAGAGCCTGGAGAACGCTCGGC--------------------------GTCCA-------------------------------------CACTGGCCCCAAGCCACCC------GCGGAGTGGGGAGTGAGCAGGGGTCAGAAAGGGAGTTGACACTCCTACTGGTCAGGGACCAAGGA-GTCACGCCTAATC s bosTau2.chr29 3996484 1054 - 45822729 cttagaaggaagtAAACATGCTTGAATATCTGGAATGACCAGAAACCGGACTCCTGTGTGAGAAAATGGTGTAACAACAACAAAAGGTGTAACAAAATACACGTTTCAGGAGG---TTAAGCTGAATTTCATTTTATCAGGTAGCTTGCAAAGTTATCAGTTTCCTACTAAAATCTGTCCTTCGA----TATTTTAATATCACATGAAGCGCAGAGGAACCGAGAGTAGTTCC-GAGTTGGGAATATTAAGTTTGCTCTGTATTCAACCTG------ATGACGAGATTTTTAACTGCTGGAGTGAAGA---GTACGATCATCC-TTCTCTTTGGCATTAATGAAAGTCAGCCGCCGATTTACAATATAAAGACGCTGACCCACGGTCTTTCCAAACAAAACGAAAGGGACTGGCTGTCGGCTCGCCTAGGGAGTTGGGGTTAGGGACTGACGGAGCCCGGGATGCTCCACCGCCCTGACCACGCCGTCCGGGC-TCGCAGGCCAAGTTCGCCTGGGCCTGGTCACGTGAGGCCCCCACACCCTCCCACCCCCCGCAAGTCAGTTCCCTGCCCCGGCACGACCTTGGGCAGCCTCCG-CGGCCACCTGCCCTAGA---CCGCGC---GCCGCACGCGGGGATGGAGGACACTCGCGAGCGGGGACTCAGGCCAGGCGCCCCGTTTCGAATGCACCTAGGGCGCTCGGACTGCGCCTGAGTCCCAGCGCCAAGGGCGTGTCCCCACCGCTGCACTGCGGGGGCGGACGCCTGGAGGGGGGTCGGCGGCGTCCTTCTGAGTCCCT------AGCGTCCCTCTGGCTCCCGCTTGGGACCGGCCCGCGATCCGGCGACTGCACCCCAGACCCAATCCACCCCAGGAGGGGGAGGGATGGGGCGAGGTCGAGAAAGGATCCGCAGCGCCCTGCTCAAGTCCTCTGCCAGGTCCGGAGGGCTGAGCATCACTCCCGCTGCCCTACTGCGGATCCCCAGACTCAAACCACTTCGGCGAGGGGAGTAGGGTATAAGGAGGG----GAGAGGGAGCCGGCGGTCCTGGTGGCCCCCGGCCGGGGGCATCGTGCCAAGTC a score=11929 s mm7.chr19_random 1772718 578 + 2598976 GAGTGGAGGCATTTTGCCCAGTCTG-GGGACCAAGCATCTTTCCTC-----CCGTCCCG--------------------------GGATCCCCCAGATCCGTCACTGCGCGGGGGAGGGAGTGCCCTCTGCTTCTCCAATG----------CGCGGCTCACGCGTACCCT-ACGGGCACAGTCT-----GGGTCTCCCTCCACAC--TCTTAAGAATGACACCCG-----------CGCGCCCAGCCCAGGGCGGTGCCGCAG-------------------CGCTGCCCTCGCGGT----------------GTCTTACCGAGTCTGC--------------------AGACGGCGGCGGCGGAATGAGCGAGCG--GAGTccgggccggg------------gcgggcgaggcc--aggctcaccgacgcgcgccgcgggtgattggctgagcccagctgggctgca---gcgcgggcag-gac--------------------ggggcggggcctggacggggcgggGC---------TGCGGGGAg-----------gaggtcagtaaggaaactgaggctaa--------gtcccg--agcttgccaacggcagacctaggac------aacattccttaccctgagagcctcagtttcttcatatacaaaagggaccaaCTCATTAAAGCCATGTCCAAAACAGCTCTTTGCACCATACTTGGCTTACACTCGCGGTTTACACTAATCCGCCCGTAAACTTCTC s bosTau2.chr29 3997655 769 - 45822729 NNNNGGAGGAGTCCTGCTAAGTTCGAAGGGCTGAGCATCCCTAACCTGCAGCCGCACCGGACTGCTCTAAAAAAACAAGAGTCGCGGACCCCCTAGACCCGGTCCGCTGCGGGGTATGTGGTGTCCCTCCTCGCTCCAGTTTCGAGCTCTCCACGAACCCCGCGTCCCCCGGCGGCCCCAGCCCAAGAAGTGCTCCCCCCCGCCCCGCCTCGATCGGGACCCCTGCCGTACCCGTCCGCAcccggccccggggcccgccgcagccagtgctcggcgcccgcccgccctccccgcggcgcgcggACTCAGCCCGGCCTTACCGAGTCTGTGGACAGAGGTGCAGCGGCAGAGACAGCGGCGGCCGAGTGAGCGAGCGACGAGCGGGAGCCGGGGGTGGGAGGACCGCGGGCGAGGCTGAATGCTC-CCGGCGCGGGCAGAGGCCGATTGGTTGAGGCGCTCGGGGCTgcggccgcgcgggcggcgactcccggcgccaggcgggccgggggcggggcctggacggggcggggcATCCTCAGGGGCGGGGCGCCCTTGGCAGCTGGGCCCGCGAGGAAACTGAGGCTGGCGGGGGGTGTCACGCCACCTCCGCCTCGGCAAGCCtggggcctaggggagatttctcgccctgcgaacctcagtttactcatctgaaaaatgggccagctcattagggctatgcccataaacgcgctcagcacagtgcctagctcaTGCTCGACCTTTATAGGCATTGCCCCGTATAATCCTC a score=4764 s mm7.chr19_random 1773856 189 + 2598976 CCTCCCAGGCTGCAGCTCCAGGCCCTGCGTGTAGCAAGCTCTCCAT----AAATGCGCTGAAGAAGGAAGAGTCGCAGCTCT----GAGGTCAAGCACGCCT---GGTCATGGAAGAGCCCTGTTTGCCTCCATCTTTC--TCTGC----CTTG-------CCGTGGAAGGGTTCCATAGAGAAAATGAAAGTTC-CCCTTGATCCCGCCCCCA s bosTau2.chr29 3998917 213 - 45822729 CTCCCCAGGCCCCAGCTCGCGGTCCCGCATACAGCAGGTGCTCCGTCAAAAAACCCGTTTAATGACCAAAGACCG-GGCTTTCCTAAAGGCCAACCACTTCTTTGGACGGTGAAAAACCCTTGCTGGCCTCTGCCTTTCGGTCTGCAGTATTTGGTCGGCACCGCAGATGGATTTAGAAGAGAAAATGAAAGTCCTCTCTAGTTCCCGCCCCCA a score=8320 s mm7.chr19_random 1774334 635 + 2598976 CATCGGCCTCGATGGCTCTAGTGTCACCT--CTTGCTGCCCCCTACTTAAGGCTCCTTTTAAGT-----CCTGGACTGTTGGACT-------CACCTTAAATGCCCTT-CCTTCTCTCCCTAGAACCCCAG-TCCTAACCGGTCCCCTCCCCAAGGACACTTCCTCTTTTCTTGGCGTCCTGCTTT-GCGTCCCTC--------------------TGGATTGGCCCTGTG---------------CCCTGTCTGTCCAGGAGGCTCAGCGGCCTTGACAGCA-GGCCCTCCCTGC---------------------CGGCCAGGAGGGACAGGAGCAGGGGCGGAGACAACATCAGAAGGAACTCTCAGACACCTCGTGCCTTGGGGA--------------GGCACCATAATGAGCC-AGAGCCGCCTGCACCTGGTTTTATCCTGTGGGGACCTCATTTTCCT------TCCTCTACCCTCACCATAGCCCTTTTCCCAAGGACTGTAGCTCCCGG-AGTGGCTATTAATAAAGAGCTTAACCTCCCCCTCGCCCCTCGGGGTGGGGATGGGGAAGCTTGGGGC--ATT--AACCTAAACTCCCTGAGCGCTGAAAATATACCAGGAACTGGCACCAAGGCTAGAATAACCTTTCTCAAGCTCGCCTGTTTATTTTTCACATTCTTTCTCAGTTTCAATCCCATAGACTGTGCCAGCTGCTCACGATGGATA s bosTau2.chr29 3999950 680 - 45822729 CACCTGCCCTGGTCGCTCCAGCGTCCCCTTGCACGCATCTACCTGCTTGTGG-GCCTTCTAGGCTTGTGCCTCGCAAGTTGGACTGCCGCCCTACCTCACATGCCCTTTCCTCCGATTCTTAGAACCCCAGCTGTTTGCGGGTCCCCGGCCCAAGGTCACTTTCTCCCTCATTCCTTTCCCCCTCCCACGCCCCTCggggaatgggggggggcgggcggaggggcgcaggggggtggcggggggCACCGGGTCTGTTTCCAGGGCTCCACGGCCTTGACTGTGCAGCCCTCCCTGCGAGCCGCCTTGGTGTCACCTGCTGCCGGGAGGGACAGGGGCAGGGACCGCGGTGGCCTC----------CCCACTCACCT-GTGCCCCAGAGGCTGGACTCTCTCTGGGGACCTTAAGGAGCCCAAAACCACGAGCAGCTGCAGCCAGGGGGCAGAGGCCTTACTCCCTTCTCAGCTCTGCTCCCCAGACTGCAGCTC----CCTGGGGACTGCAGTTCCCTGTAGCG------AACAGAGCATCTAG----------GTCCCT-------------GGGGAGCTCTGGCCTGATTGGACCCTGAGTTTCCTCAGGGCCAAAAATAGGCTAGAGTCTGCCTCAGAA-----AGTAATCTTTCTC---CTTCTCTGTTT--TCCCCAAATTCTTTCCCAGTTTGATTGGAACACACTGTAGCAGCTGCCTGTTGTGGCTA a score=5302 s mm7.chr19_random 1775731 346 + 2598976 ACTATCCCACCTAATATA----------TGTGACAGGGAATTTTCACAGCCCCCACTGTTTTGCCAAGAGGATGGCTGCTCCATGGTCATTCTCTCTAGCCTCCTTTCCGGTTGGCAGGACTCAATAGATATCTATCC-AAAGTGCTTAAGACGTTTGGGGACTTGGCTATGAGACCTAGTTTTGAGGGAACTCTACTTCATACT-AAAGAATGTTGTAATCACAGGAGGCAGTGTTTTCCCCTCCTCCTCCAAGCCTCAGGCCCCACTGAACTTGAACTTTGAGCCCCTGTACACGTTTTGAGTCAATATCG-------------------GAGGTAGTATTTGCTCAGCCAACGTCACCAG-GTTTCATGAGGACA s bosTau2.chr29 4000962 322 - 45822729 ACTGTCCAACCCAAAATAGAGAAACAATTGTAATACAAAACTTGTAAAGCCTTC-CTGGCTTGCCAAGAACACAGTTGAGTCCCACTCACTCTTGCCAGCCACATTTCTTGCTGGCATCTCCCAGCGGGTTCTGATCCAAAAGTGTGTGAGATTTTGGGGAACTCAGTT-----------------------TCCATTTCCCAATGGAAGAATTTTGTAATCTCTGG-------GTTCT----------------------GCACTTCTGAACTTGAACTTTGAACCC---TGTGGGCCGTGAGTAAACAGTGACAGTTACACGTCAGGGTAGTGACAGTGTTTGCTTGGCCAGCATCACTGGCATTTGGTGAAGACA a score=56675 s mm7.chr19_random 1779232 927 + 2598976 TTTCTTTAATTCTTGAACTCAAGAGGCAGAGGCACTTTCTCTCTCCACCAGCCAAGCAAGACGCCCAAAGAAAAGAAGGCCACGGGGAAGAAGGTGTCCTCGGCCCTAGCCGTCATCATTGTCGTCCAGAAACAGGACGCCAAAAAGGTGGTCAATCCTTTGTTTGAGAAAAGGCCCAAGAACTTTGGAATTGGTCAGGATATCCAGCCCAAAAGAGATCTAATACACTTTGTTAAATGGCCTGGCTACATCAAGCTGCAGTGGCAAAGAGCCATCCCCTATAAGTGTCTCAAAGCACCTCCTGCCATTAAGAAGTTCACCCAGGTGCTGGACAGGCAAACAGCTACTCAGCTGCTTAAGCTTGCCCACAGGTACAGGCCAGAGACAAAGCAAGAGAAGAAGCAAAGGCTACTGGCCCGTGCTGAGAAGAAAGCTGCAGGCAAAGGCGACGTCCCAACTAAGAGACCACCTGTTCTCCTAGCAGGAGTCAATACAGTCACCACCTTGGTGAAGAACAAGAAGGCTCAGCTGGTGGTGATTGCCCATGACGTAGACCCCACTGAGCTGGTGGTTTTCCTGCCTGTCCTGTGTCGAAAGATGGGGGTGCCCTACTGCATCATCCAGGGAAAGGCCAGACTGGGATGCCTGGTCCACAGGAAGACATGCACCACTGTTGCCTTCACACAGGGTAACTCGGAAGACAAGGGTGTTTTGGCTAAGCTGGTGGGAGCTATTAGGACCAATTATAATGACAGATATGATGAGATCCGTCGCCAC-AGGGAGGCAACGTCCTGGGTCCTAAGTCTGTGGCTCGCATTGCCAAGCTGGAAAA-GCAAAGGCTAAAGAACTCGCCACTACACTGGGTTAAATGTACACTA---AGTTTTCTGTACATAAATATAATTACAAAA-------TTTAAaaacaaacaaacaa s bosTau2.chr6 37930165 924 - 69624268 TCTTCTTAATTCTT------ATGGTAGAAATGACCCTGCTCTCTACGCCAGCCCTTCAAGATGCCGAAGGGAAAGAAGGCCAAGGGGAAGAAGGTGGCCCCGGCCCCGGCCATGGTGA---------AGAAGCAGGAGTCCAAGAAGGTGGTCAACCCCCTGTTCGAGAAGTGGCCCAAGAATTTTGGCTTCACACAGGACATCCAACCCAAGAGGGACCTCACCCGCTTTGTCAAATGGCCCCGCTACATCCGGCTGCAGCAGCAAAGGGCTATTCTATATAAGCGGCTGAAAGTGCCTCCTGCAATTAACCAGTTCACCCAGGCCTTAGACCCACAAACAGCTACTCAACTGCTTAAGCTGGCCCACAAGTACAGACCGGAGACAAAGCAAGAGAAGAAGCAGAGGCTGCTGGCCCGAGCTGAGAAGAAAGCCGCCGGCAAAGGCGATGTCCCCACCAAGAGGCCACCTGTCCTTCGAGCAGGGGTCGACACTGTCACCACCCTGGTGGAGAGCAAGAAGGCTCAGCTGGTGGTGATCGCTCACGACGTGGATCCCATTGAGCTCGTGGTCTTCCTGCCTGCCCTGTGCCGCAAGATGGGGGTTCCCTACTGCATCATCAAGGGCAAGGCCCGGCTAGGGCGCCTGGTCTACAGGAAGACGTGCACCACTGTAGCCTTCACACAAGTCAACTCGGAGGACAAGAGTGCCCTGGCTAAGCTGGTGGAAGCCATCAGGACCAATTACAATGACAGATACGATGAGATCCGTCGTCACTGGGGAGGCAGCGTCCTGGGGCCGAAGTCAGTGGCTTGCATCACCAAGCTGGAAAAGGCGAAGGCCAAAGAGCTGGCCACCAAGCTGGGCTGAGTGTGCACTATGGAGTTTTCTGTGCATAAAAGTAATAAAAAAGATTCTCCTTCAAAAAAAAAAAAATGA a score=9089 s mm7.chr19_random 1784203 172 + 2598976 tttgatttgatttgacttaatttTTATGAGTCATAGCCATAAGATAGCTTTGTCCACGAAGCTAGGAATCAAGCTAGGATAGACAAAGGACT-GCTGTCTGCTCTGCCTTTGACTGATACAAGAACCACATTATCAACAAGGTGTCTCTTTGCCCATCGCCAGGGAAGTGGAG s bosTau2.chr14 18416828 173 + 50711261 ttTTTTTTTTTTTTTCCTACATTTTATGTGCCCCAGGCATGAAATAGCTCTGGCCACCAATCCAGGCATCAAGCTAGGATGAACAAAGGACTAGACATCTGCTTTGCCCCTGACTGATATAAGAGCAACACCACCAACCAGGTGCCTCTTTGCCCATTGCCAGGGAGTTGGAG a score=5996 s mm7.chr19_random 1805810 109 + 2598976 TTTCAGAACTTCTTAGACATCGGCTCTGCAGTCACAGCAAACGAGGTGCAATCTCAATGGTGTTAATGCGGAGGATGGTCTGAGGGTTCACAATGACTGAAAGAGAGAA s bosTau2.chr29 4031080 109 - 45822729 TTTTATATTTCTATAAATATCAGCTGGACGGTCAACACAGACGGGGAGCAATCTCGATGGTGTTTATCCGGAGGACGGTCTGCGGGTTCACGATGACTGAGAGAGAGAA a score=8789 s mm7.chr19_random 1807778 183 + 2598976 CACTGTCTCATACTTACTTTTTTTCTTCCTGAAGTTTTTCCTTTTCCTAAATTTCATGTTGATTTTGGGCCATGATTCTGTCTTTTCAATGACTGTGGCTTCAACTCGTACAAGCTCCTTTCTAGAAAGACAGGAAAGAAAGTACACTGTGACAGTGCTCCTCCTTCATTGCCTTTCAGTTTC s bosTau2.chr29 4032240 171 - 45822729 CGCTTTCCCCCACTTACTTCTCTTTCTTTTGTAGTTTTTCCTTTTCTGAAATCTCATGTTGACTCTCGGCCACGATTCTGTCTTCTCGATGACCGTGGCTTCTACTCGAACAAGGTCCTTTCTAG-AAGACAGGAGAATAA----------ACAGTGATGTACCTTC-TTATTTTCCATTTTC a score=12548 s mm7.chr19_random 1809798 229 + 2598976 ACTAGGTGCCAGAGTCCCTGAGTCCACAACACAACGTGCACCTCACCTTCTCCAGCCGAATCCTCTCTCCACACTTGATATCCAACTCATTTTCAATTAGAATCAGGTCCTCTGCGGTCACCTTCCATTGGTGGCTGGCAAAGTGCACGACAGCAAAGAGCCGGCCATACTGGCCCGTGGCGATCAGCTCATTCACCCTCTTCACAACCTCTGCAGGACAGTGGGTGGC s bosTau2.chr29 4034225 221 - 45822729 ACTGAGTCCCAGATACACTGAG----AAACCCATGGT----CTCACCTTCTCCAGCCGAATCCGCTCTCCGCAGGCAATGTCTAACTTGTTCTCAATTAGAATCAGGTCTTCAGAGGTGACTTTCCACTGGTGGCTGGCAAAGTGCACCACGGCGAAGAGCCTGCCGTATTGGCCCCCGGCAATGAGCTCGTTCACCTTCTCCACGACCTCTGCAGGGGGAAGGGTGGC a score=7964 s mm7.chr19_random 1811428 233 + 2598976 aggcctctcaagtgctagggctacaaaggcctccctgccca-gctCCTGTTAAGTCTTACCCGCATGGTGTCTCGTCTCTTCAACAGGGTCCGGCAGAACCACTTCTTGCCAGGGTGGTGAGCTCAGGGAGGTCTTAGGAACATATCTGCAAAGCGGTTTCATAAGCACACATCACATGCCCA-GGAAAGGCAGCCTCAACTCCCCAACAGCAGCCGTGTGCAA-GCACCAGGAGG s bosTau2.chr29 4034982 232 - 45822729 AGGCCCCT---GTTCCGTGGCCAGGAGGCCGCCCCTCCCCCCGCTTCCGCCCCCCCTTACCTGCGTGGTGTCTGGCCTCCTCTGCAGGGTCTGGCAGCACAACTTCTGGCCAAGGTGGTGAACTCAGTGAGGTTTTAGGAACGTATCTGTAAAAGTATTTT-TGCATGCAGGTCACACACACGTGAAAAGACAGTTCCAACCTGTGAGCCACAGCTGTGCTCAGCACGCCAGAAAG a score=7004 s mm7.chr19_random 1812029 120 + 2598976 GGAAAAATCA-CCAAACCCACATTTTGATATTTTTACCCTTGTGGATATGAAGCGCTCTGTGAATTGAACCTTCGAGAAGCAGACCAGAGGGAGGCTGTAAG--AAGAGAAACATG-GTGGGTA s bosTau2.chr29 4037032 121 - 45822729 GGAAGAGTCAGCAAAACCCACATTTTGATATT---ACCCTTGTGGAGATGAAGCGCTCTGCGAACTGAACCTCCGAGAAGCGGACCACAGGGAAGCTGAGGGACAAGAGAGACATGCGTGGTTA a score=14836 s mm7.chr19_random 1813362 849 + 2598976 AGGGTGGCTAGCAGCCCGAGGA-CAACTGTCCACACCCATGCTCT--------ACTTAGCAGCTTCTAACTCG--CTTTCTTTACATCCCCATTGTATGACCCTGGGTAGGTCATTTGTCTAC-----ACCCATTTGTGTCCCTGTACT---ATAGGACCTACACTTAAGTTTAAGAGCACTTCTCAGTATT-AAGCAATGAACGGAAGGAACCACGTTCTCATCCCAGGTTCTCGTACTCCAAACCCTGTGCCATATTCACGACTCTCATAACCAACACACCAGGAGCCAAGGT-GGACTCAGACACACGGGCGGCAGACGGCGGAAGCACCG-----CTAGCTTCTTCC-CTCACCAGGCCTCCCTGGTCTCACCTGATCCGGATCCCTGGGATGCCAAGATGCTACGGCTACACACAGACACCAGCCGCCCGAAGGCGCCCGGCAATGCCGAGGCCGCTATGGCAGCAGCCATGTTTCCACAGTCCCAACCGGAAGCGGAAGCAGCGCGAACCTTGTGCGTCAACACACAAACTCAGTAGGGAACACCTGGAGCAGGGAAACAGGGATCCTACTGCAATCACTGGCTTGGCGGGGAACGCAGGAAACGGACCGGCCGGGAATCCGCGCCCTGGCTGGGAGCGCAGGGCCTTTTGCGGATTCTGGTCCAGTGGGGAACACGGTCCGACTGGAACTCGGGTCCCACAGGACTAAACTGGCCGAGCAGGAAGCATCAGTCAGGGGCTGCATCGCGGAGCAGATGGCCTCGTCCACCGTGGAGAGTTTCGTGGCCCAGCAGCTACAGCTGCTGGAGCTGGAGCGGGACGCCGAGGTGGAGGAGCGCAGGTAAGTTTGGCCGCAGGTCCCAGGCCCTC s bosTau2.chr29 4040568 684 - 45822729 AGAGTGGCCTgcagcctggggagtgacggttaaaacacaggctttggagccggaccgagcta--tctgattcagtcctctcctacttccctgctgtatgaccaagggcaagttacctgaccattttgagcctgagtttgctccccaacttaaatggagcctataTGGAAGTTGGAGAGCTATCACCAATATTTAAGCTATTAACTAAAGGAATCAGGGTCTGAACCCAGGGTTTC-----------CACGACCGATAATCACCGCCATCA-----AACAAGCGATTAACACTGGTCAGACGCAGACACACG--TGGCAA------GGCGCCCCGTGTGCCCAGCTTCCTCCGTTCACCCCGCGGGGCAGGCCTCACCGGCTCCGGGTCCCGACGCTCTCAGGACGCTGCGGCTGCATGCAAACGCCAGCCGCCCGAAGGTGACCGGCAGGGCCCTGGCCGCCACGGCCGCCGCCATCTTCCCACAG-------CGGAAGCGGAAGTGGCGCGAGCCTGGTGCGTCGACGCACCGGGTCCG--------GCCGGGAGCA----------------------------------GCGCCGCGCGCTGCAGCCGGACC---------TCCGCGGC------------------------------TCTGGGCCCG----------GGCCGGACTG-------------------------CGGCC---------------------------------------ATGGCCTCGACACCTGTGGAGAGCTTCGTGACCAAGCAGTTGGAACTGCTGGAGCTCGAGAGAGACGCGGAGGTCGAGGAGCGCAGGTA----CGGCCGCCGGCCCGGGCCTCTC a score=11730 s mm7.chr19_random 1815282 196 + 2598976 GGTGTCTTCTAGGTCCTGGCAGGAACACAGTTCTCTGAGAGAGCTTCAGAGCCGAGGGGTGTGCTTGCTGAAGCTTCAGGTATCCAGCCAGCGCACAGGGCTGTATGGGCAGCGGCTGGTCACCTTTGAGCCCAGGAAGTTTGGACCTGCAGTGGTGCTTCCTAGCAACAGCTTCACCTCTGGTACGTGTTCCCTG s bosTau2.chr29 4043165 194 - 45822729 GGTGTTTCCCAGATCCTGGCAGGAAAATGTCTCTCTGAAGGAACTCCAGAGCCGAGGCGTCTGTTTGCTGAAGCTGCAGGTATCCAGCCAGCGGACCGGGCTGTACGGACGGCTGCTCATTACCCTCGAGCCCAGGAGATGCGTATCTGCAGCTGTGCTTCCTAGTAACAGCTTTACTTCCGGT--GTGTACCTTG a score=9242 s mm7.chr19_random 1866830 380 + 2598976 TCTTTCTTCTTGATTTTTACACAATACTTCCTTTTCCT-GAAACAACCATCGACCCTCACAGAGGCCACGTGCCTCGCACGTGTCTGGAAAGCAGAGAAAAGCTGAGTGTGCTGAC-AGTGGTTCCACGTCACAGCTT----TGCGCTCTGTCTCAGC-ACCAAAGGCT---TGGGGTGAAGCAGGACATCACAGGGCTGATGCTTGAGGCGAGGCCCTGGCTCCCTGCATAGGAAGGATTCCAGACTGTGGAAAGGGTTGTTAGTAGGACGAGGGTGGGGAGTAAAGCCTATTCTTTCCGTTGGCTACTGTCTGACAGCTAGGGTGCAGGTGTCCCATGAGACTCTCCTGGTGCTTGGGGC----TCTGCTGTTTGTGAGACACCTGAGAAGT s bosTau2.scaffold3428 409 384 - 82668 TTTTTCTTCTTGACTTGCATGTGACATTTCCTTTCCCCAGAAAAGATCAGAGCTTCATGGAGAGACAGTCGGCCTCACATGTGTTTGGAAAGCAGAGAAAAGCCCTGTGTGTTGACAAGCTTTGCCACATTCCAACTCCAAACGCTGTCTGTCTCAGCAAACAAAAGCTCTCTGGATGGGAGCCAGGAGCCCCAGCGATAAAACCTCAGACTGGCTCAAGTGTCCCTGCACAAGAAGGATTCCAGTCTATGGAAGGTATTATTAACTGGAGAAG--------ACAAATTACTTTCTTTCTGTGGATCACTGCTTCACATTCAGGAT--AGGGGTTCCAGTGGGTCTACTGGGAGATCAGGGTCCCATCTGTTCTTTGTTCAGCAACTGTGATGT a score=21953 s mm7.chr19_random 2284919 488 + 2598976 AAACAAAAGATTAAAATTAGGAGACTGGAACAATAACAGCATTGTTTGTACCTT--CCAAAGCCAGGGTG---TTTCAAGAGATTTTGTTTTAGACATAGACAAGTATGAAG-GCAGTTGGG--AGAT-TTGGTTTTCCTGTGGCTACTCGCCAAGTGTTTTGACAGCCTCTGCCTTGTACAAAATGAGTGAAAAGTAATTTGCATAATGCCAATAAAGGGATGTTCTACTTTGGAAGTGCTGTGAATAGTGACCTTTCTACTGGTACAAATGACAAAGCACTTTACAAATAAAACCCTGCAGTCAGAATAATCAATATGAAGTGATGGTGTG-GGAACGAAGGGGGACAGGCAA--GAGCAGTGGGGAGCAGTTGGCAGTGATAGAGAGCCACTTCAATCTAACAAAGCAAAAA-TGCAGCTCTTGGATTAGCTGCTGTCCACAACCAGTGGTTTCTTTTCCAGAGCCACATCCTACA-----------TGTTCTTTCTCAAATGTGTCAA s bosTau2.scaffold8034 23386 506 - 35197 AAACAAAATAGAAAAAATAGAAACATGAAATAGAAAAGATAACGTCTGTGTATTATCCAAGGCAAGGGTGCTATTTCAAGATACTTCGTTTCAGG--GAGACAGATATACGGTGCTTTTGGTCTAGTTATTGTTTTTATTGTGACTACCTATTGTATGTTTTGATAGCTCCTACCTTTTATAGAATTAGTGAAAAATAATTTGCATGACACCAATAAGGCAATGTTCTACTTTGAAAATATTGTAAATGGTGACCTTCCT----GTTCAAATGACAAAGTACTTCACAAATAAAACTCTACAGTTGAAATAATCAACATGAAATGATGATGTGTGGAAAGAAAAGGAGTGGAGAGTGGAGCAGTGGGGAGTGGTTGACAGTGATAGAGAGCCACTTCAATCTATCAAAGAAAAAAATTCAGCTATTAGATTAGCTACTGTCCACAACTAGCGCTTTCTTCTCCACTTCTACATCCCGTACACTGTGCGCTTTTTTTTTTTCAAATGTGTGAG a score=21049 s mm7.chr19_random 2285407 554 + 2598976 TTCTTGAACAATACTGATTTTGACATTTCCCATAATATGGAATGGCTCAAAAAATCATTACAATCAACAATCATTACAATCAACTGTGTGAAATGGCTAGAAGATGCTTAAATGCCTTTAGTGCCAGCTTTTTGCTGGTGGAAGCAGACTTCAGACCAGCTCTAACCTCTGATTAAGCTATCACTTAATGCATTGTAGCTGAGACCCTGATTCACTA--AAAGCATGAACAAAAAGAAAAAAGGAAAAAACTCCAACGTTTCAATAAGAAATGACATGGTTTCTTTCCATGTTTGTATATTCTATAAATTCACTTCAGCAATGATGCTCTTGTT-----------GACAAGACATTTTCTTGATTCAATATTTTTGTTAAGGCTACATGTGCACTGTAATTGTTTTATCCATA-TGGTAGGATTAGATCTGAGACTATTATCCCTATGTGTGAATAAATTATAAGT-TCCTATGGAGCTGAGTTCTATAGTACTACCCAGGAAGGTGTGAAGAGGTGAAGTCTGTATAATAGAGGAAGTCCTAATTTTTTATTCAGTCTTCCTAGGACT s bosTau2.scaffold8034 3 557 - 35197 TTCTTGGACAATACAGATTTTGACATTTCCCATAATATAGAATGGCTCAAAACatcattacaatcaacaatcattacaatcaacTGGGTGAAATGGCTGGAAGATGCTTAAATGCCTTTAGTGCCAGCTTCTCACTCACTGAAGCAGACCTCAGACCATCTCTCACTGTTGATTAGGCCACGGCTTAATGCATTGTAGCTGGGACTCTGATTTGCTAGGAAAAGGGGAGAAAGGGGAAAAGAGGCAAAAAGTTGAATGTTTTAATATGAACTGAAA-GGTCTCCCTCC---TTTCTATATTCTGTAACTTC---TTACCGCTCATATTTTCCTTCTGGTTACATGGAGAAGATATTCTGGGGATTCTGCA-TTAGGGCAAGGTTCTGTGTGCTTCCTGTGTGACTTCTCAATCTTAAGAGAACTAAGTTTGAGAAGGTTTTCCTTAAATGCATGTGATTTAAAAATGTATTATGAAAATGAGCTCT---GTGCTCATCTCAAAGATTCGGACAGAC-ATCTCCACATGATGGAGAGAATCTTAGTCTGTAAGTCAGTTCACCCAGGATT a score=3334 s mm7.chr19_random 2288664 114 + 2598976 ATAAGTAGTTTACTTATATAAGCTCTAGGTCTTTCTTAGTGTAGCTCAATAAAATATAGCCAAAGATGGCTAGCTAATTGAAACCTTTTGTTGGTTGATAGCTATTAAAAATCA s bosTau2.scaffold8034 738 114 - 35197 ATAATCCATGTGTTTGTTTAAGCATCAAGCCATGATAATACCAACTAAATAAATTATACCTATAGACTGCTCATTATTTGCAACCTCTTGTTAGTTATTAGTTCTTAAAAACTA a score=17345 s mm7.chr19_random 2290733 1068 + 2598976 TGTAGATTTCAAATATAGTATTGCTTAGGATTTGTAAGAGAAGTAAATGATTAA---------AATACACTATTATAAATCATGTTTGTACTATGCAAATAT---------CTTCAAGGTGACTCATGGGTAATTGTTGTAAGGAAAACCCCTGACTCTACCTAACAGCCACCC-----TACATATGTTTTAATTTCACACATGCTTTCATCTCTATGGGATTATTT---AGGACATTTTAAATGAGTACTGTTTT------TAAATTCAAAATGCCAACATCAACCTCTCA--------CTTGTTTTAAATGAAATCATTTCCCACCTCTTCAAATAAGGAAGAGCAAGCCTATACGCAGTTGCTTAGGACAAAGCGTGCTAGCAAAAGCTGTTTGCTACAAGTATTCTTGAAACAGTTAAGTAACAGCAACCCTGTCTAGTAATACCAAACAACAAGCCTATAACTATGACAGGTGTCCAGATTGGCAGAATTTCTCTCAGTAAGAATGAGTAAATTTTGGAAACAAAAAATGCCAAAGCTTCAGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtttgtgATGACTTGTAGAACTTAACCTCAA---CATAATTTTcttcctcccttccactgtctcctcctctctcccttcctccattctttcctacttcTAAGGGGATGGGTATATTAAAGCTTTGCCCTGTAGAGATAACATCACAAGAGGAAGTTTTCAAGACAGTCTCACCAAATGTTATCACCTATAGAGCAGAGTACATTCCAATTTCTGAAATGCTGATGGATAACAGTGATGTGAAAGACATACTTCTTACTGTATC---AAATTCACAGTCAATATTTGAACCCT-GGGTGATTTGGGGTAAGAAA-TGCAAATTCCACAGCATACCAGTACTATGCTGAGTAACTGATCAGCTTAGT-GGACCATTGAAGACATTGTACATGGTCTTTTGCTGTTTTTCCACTGGAATGCA-CGACTCTTTGCAAAGCCATTCTGCTA--TCACATCTATGATTAAGTTCACTGGTGTTAGAGTCACATTACCACAGTAGTGAGTGATCCA---GGCTCCAGAAAGGA s bosTau2.scaffold8034 1413 1013 - 35197 TATGAATTTTAAAGATACTGTTGTTTAGGATGTCCAAGGAAAATaagtaattaatctgaagaaaatgggcagtaaataataatccttgtggtgtgcagatatagcaagcatcttaaaggtgacccatgaatgggcaaagtgtggagaaacactgG----ACTTTGTAATTTCCTGTCTGTGCATATGTTTGGATTTTATGCGAGCTTTCATTTCTACTTTTTTTTTTTGGAGGGCATTTGAGAAGA-CATAGTTTTAAATAATCAATTTAAAATGCTAACAGCAGCCTCCCATCTTTCTACTTGTTTAAAGGGGGAT---TTCCTCCCTCTCAGAACAAGGAAAGGTAGGGCTAAGCACAGTTCATCAAGACCAGGAATCTTAGCAGCAATGGTCTGTTGTAGGCACTGTTAAAACAGATTGGTTATAACA-CCATGTCTAATAATATCA--CGGAAAGC--AAAACTATGATGGGTGTCCAACTTGGCAGGCCTTCCTCCAGAAAGACCATTTTGTTTTTGGCAACCAAAAA--ATAAAGCTTCATCAG-----------------------------------------ATATACATGAGAGATGATTCACAGCATCTAGTCTCCAGACCTTGCTTTCCTTCCTCCCAT-----------------------------------------------GGAGACAAAAAAGCCACAGCTCTTACCTCTAAAAACTGCATCACAGGAAGATGTTTTCAAAGCACTCTTCCTGGTGACTAACTGCTATAGACTAGAGAATTGTCCTATTTCTTTAATGGTAATGAATAACAATGATA--ATACACGTTTTCCTAACTATGTTGGGAAAAAAAAAATCAAGCCTTTAACCCTTAGGTGACGTTAGGTGGGAAAATGTAAATTCTTAAATACATCATT-TTAT----AGTGATTAATAAGTTTGATAGGGTTATGGGaattataatagatactaattttttttattattattGAAAAATGGTAAATCTTGAAAGGGACATTCTGTTGCTTCAGAACTATAGTATAGAGCACTGATTTGGGGGTCATATTTAACCTccagttaattaactgtttggctctaggaatga a score=24677 s mm7.chr19_random 2292001 1038 + 2598976 acacaAAATGATAAATTAAATGCTTGAAAAAGCAACAGTTGCAAGTACGGTACACGTCATTGCTATTATATTGTCCTGTACACACACAGA---CAACGTCAACTAGAAACTGTAGTTACAAATCTAGAAATGTCAGTTTCCCCCACACAGCAGTACatttatttttatttttataattttaGCAGTACATTTATTAATGCAGTTCATTATGTTTTCACATTTT-----------CCTGTTTTGTTGTGTTTCTTTTTCTATCAGCTTTT-TTAAGACTCCGTAGCCATTTACTTTCTTGCTCCG----------AACCTTGACAGCCTAGGTTTTTGTTGCACATCTTTTTGAAACATGTATTCTCAGACCCTCAAATGTAAAATTGCATCTTGATTTTGTATTGCCAACTATTTCAAAAAACTCTTGACTCATTTAACTGACCACA--TATGTTGTTTAAATGAGGCTCTTACAATTCTT----GAGAACAAATAAAATCTTTCAAGTTCTGTGGCTGTAAACTTACCAGTGAGCTGGCTGTTTGAAACTTGACTTACATTAGAGCCACCTCAGCATCTAAAATCAGGATCAGAGTGCTCAGGAACTCTAGTGATATTCATAAATTTCACAGAGACATTTTGGGTTCAGAGTTAATGGACCAACTCTGAATGCTTTTTATCATTTTT-ATCTGCTGAAGATAAATTATCATTCTGAATGCCCCCACAAAACA-CTGATGCTGCTGTTTTTGTTCAGTTTTAAGTTAGTAG-----------TATCTCAACCTTGTTTCTAG--ATGCTATATTTAAGAGACTATAAAATCGTATAATTTTCCTATCTAGATTATCTATT--TAAAG----------------TTCTATAT-ATATTGCTTTTTTAATTAAAAAA-----TGATCCAAATAACAATGTtatatttgtttcctaagg--ataactggagtgtcatcaaactgtgtagctaaagcaacagatatgtgttgtgttacaattttAATACAGACA------------------TCCAGTCCTCTCTTCTACC-------ACTACCCTAGATGGCA-CAGAGTGAC----------ATTAGATTTGCCCTGCTTCAT----GTCTGTCTCTGTGTC s bosTau2.scaffold8034 2503 1079 - 35197 atattaaatgatatattaagtgcataggaaagcaactggcatatTTAAAATTAAAGGCATTATTTTTGCATTGATTTTTATACATACAAGTTTCAAGGTCAACTTGATACTGTAGTTA-AAATCTGGAAATGTCAGCTTTTTGTGCATAGC--TACACTT------------------------------TCATTAATATTGTTCATTAAGTTTCTACTTTCTACATTTCCCTCCCTGCTTTGCTCTATTTCATTCTCTATTGTCTTCTCTTAAGAACTTGTAGTTGCTTGCATTGTTTCCCTGCATAGTGGAGGATATTGGCAACCCAAGTTTTTGTTGTATTTCATTTTTAGGGATGTGTTCTCAGCCCCTTAAATGTGGCACTGCATCTCCTTTTTGTATTGTCAACTTTTTAAAAAG---CTTGATTCATTTAGCTGTGCACAGGCATGTTGTTAGAACTAGACTTTCACAATCCACTTGGGAGAACAAATAAAATCTTCCAGCCTCTGCTGATGCATAATCAATAAGGACCTGCCTGTTTGAGATTTTACTTATCTTATAGCTACCTCTGGAGCATAAAGGGAGATTAGAACACTTAAGAATTCTGGGGGTATTCATAAACTTTGTGGAGAGATTTTGGTTTCTGACTTAATGGACCCATGGTGAATATTTTTTATTGTTTTTCATCTACTGGAGATAGATTATCCATCT---CTTTCCCTTAAGACATCCGATGTTAGCACCCG-ATTTACTCCTCAATTAGCAGGTTCAAATCCTTATCTCACTGCTGTTTTTGGCAGTGCT---TTTGGGAGAATATAGAAACACAGACGTTTCCT-----GATTGACAGTTGGTGAAGGGGACTGCAAACTTTTTACTATATTATATTGTCTTTTGCATTTAGCAAGTAGGTAACTCGGATACTAAC--tgtattagtttcctagacccacaacta-agtacca-caaaataagtggtttaaacaaca---------------ACAA----AGTACAGAAAGCTCTAGGCTGAATCTGCTCCAGGGCTCTCTTCTAACTTCTGACAGTTCCCTGTCTTGTGGCAGCATGACTCCTGTCTTCATCCGACTTTCTCTCTTTCACTCAAAtgtgtctttgtgtg a score=5069 s mm7.chr19_random 2293399 1523 + 2598976 agacctgccttggtcatggtgtctgttcacagcagtaaaaccctGAGACAGTGGTATTCTGATATTTTGAGGACTAAGGTTTGAATTGGGAGAAGGAGACATAAGCAAACGCATAATGCAAGTGAGTGTCTAGTTTTACTTGTGAATGAAGTACTTTATTCCAACA----------------GACTAATTTCCATACCAGTCTCTGGTATATGGATGTACTGGATAAGAACCCTGAAGATTTC--CAAGGGCTCTAAGTGATA------CCCAAAGTAACACAGGAAGAACACTCATTAATCATAATATGCTTGTAAAAGCAGAAATAGACTTTTTCTTTCTAGCAGAGAGGTTGAGGATCACAGTGTGTGGCACCCAGGCAACTCTAAAACAC-TACGAGC--AATAGAATAGGTTATTGCTTACAACATCGATCACAGAGCAGG---GGACATTCCTCAATCTGGGTAAAATG-------ATGCTGTTTGATAAGTG--------AACTACACTGAGGTAAAAAAATAAATAAATATGAGTGCATGAACACTAATAAAGATAAACTAAGTTGTTAATTAACTGAGTAATTAAATTGTTAAATCTTCTGATCTTCATAAAGATAAGAGTTTACTGTAACTTTCTGCC-------TCCATACCACTTACATTCCACTTCCAGACACTGTATGGTCATTAGGTTTTAAAGTATTGTTTGCATTAAATagatagttcaattattaaaagcactggctgttcttctagaggatgcatatttagttcacatcatccacatggcagttgaaaatcttctgcaacctcaattttaagggatcaaattgtgttcttctgattcctgcaggcacaaggcgtgtaaactgtacacagatacttatgcaggaaaacactcataaacataaaataaTCACTAAAATAGTGAGTATTTATCCCCCCTTATATTACTAGATAGAATAGAGTGAACAGTGTTAGACAGGGAGTTTTGTTTGCATTTTGCTTAGAATAATAGCTGGTTTTGAGAAATAGTTATATAGATTATAAATTTGCATTTATAAAGACACATTTCAATATGGTTGCCTGAAAACCATGTACACAC--AGAAATTATTAGCACA----------TCATCACATCCCTCTATGTTTGCTGAAATGGTTTAAATGAATTACCAAACAAAAATAAAATAAAATCAATATTTGTC-TGCCTTTCTTTCTCTTTATATGCATTCATTCACTGGACATAAAACCAGAAATGAAATCTAAAagacagacagagagagagagaaagagagagagagagagagagagagagagagagagagagaACAAAAAAAGGGAAAACCTGAAAATAGAAAG-TAGCAAAAATGAGAAAGAGGCAGAGAGAAGGGAGAGAGAGCAGAATGGATTAAGAGGACTGGCGAGCCTCCGTTCTCTTCGCTATGTGATGCTGCTATTTGAGAGGCCATTCTTATTAAAACACTCTTCGTCCCTCAGACACGTTATGGACTCTGAAATGTTTTTTTTTTTAATACAGCACATTCATTTAATGTGAAATAAAT-----------GGGAAGGAAAA s bosTau2.scaffold8034 3872 1171 - 35197 acccctaccctggt-atgacctcatctta----actacaaccacaaggctgta-tatcc-------------------------------aaacaaagtcacaAGTCAACCCATAACACAACTGAACACATAAAGTCATTTATGAATTAATTACTATATTCTAAGACCTAGTCTATAATAAGAGCTTATTTTTCGATTGATCTCTGGTAGACGAATTTACAGCATAGGGCTCCCAAGGATTTCACTCAAGATACCGAGTGACAGAAACACCTGGAAAAACACAGGGACGATACTTGTTgactgtgagctgactgtgtaaggagaaatagcacctatcttttcagcactgtgccccaggt---------------ctctagcaATCCCAACACACACACTAGCCAAGCATGGAAGATTCTCACATACAACATGGATT-CACAACATGACAGCACATCTGTA---CTGTATAAAAAGTCTAGACAGACCACTTTATGAATGTAATTCACACCTACACCGAGGTGTAAAGCTG--------TGAATATGTTAGCTCCAATTCAGATACATTAAAC---------------------AATTGTTAAAGCATCTGATTCTTATTTC-ATAAGAGTGAAC---------CTGACATAGAGGTCCAT----------CTTTACATCTAGCCACTCTAT-------------------ATTCTTTGAACT-------------------TACAGGGACGGG---------------------------TCCTCACCATTCACATTGACCTAGGGAATTTAGTGAAAGCATGATGATA----------------------GATTTCAG-----------------------------------------------------------------------------GTGTACATTTACCCA-----------------------------------------------------------------TAGAAGCAGAGCTTTATTTGGGAGACAGTCACTTAAATAGTTCCTTTA-------AAAGAC---------TATGgtttactgaaaattgtgtctatgcctaacaatgcttagcacacagctggtgctgaacaaa-------gtatttgttgaatgaataaaAATGACTTACCAAG-------------AAATCAGTACTTACCCTACTTTAAATTTTTTCCATAACTATTCATTCATCATGGACAACATTTGAACTAGAGACTAA--GACAAATGG-------------------------------------------------GAATAAAGGAGAGAAAAGGCTGAAGACAGAAAGGTGAAGAAAAACACAAAGAAAAGGAGAAAGAGAAAGGACATCAGAG-AGATTAAAAGATC---ATAATTCCTGTTCTGGGCGCTACACCACATGGCCCTTTCAGAGGTCATTCTTACTAAAGTACACTGGTACTTTCAAACAGAACTTGGAATTTGAAATGGCCTATG----AAAATGTAACATTCATTTAGTGTAAGATAAATTATTTGTTTCAGTGAAGTGAAa a score=28022 s mm7.chr19_random 2294922 726 + 2598976 TCCAAGAGGCTGAATCATGATATGGAGTCTTAAATCCCATTGGCTTATTTTGATTGCATTTGCAAGTACCTGATGAAAATGTTCAGATCAGCCCAT-CTCAGCATCTGAGGCTTCCTGTTGATTGTGTGGCAGAGTTGCCAGGCACATAACACATTTGTTTTACAGCACTGCATGATGAACTCACAGTGTTTTACCTCCAAGACTGAGAGTCCTTAATTTGCTCTTTGAGGAACAGTCTGTTTTCATCAAGAGACAGGCTTTAGTTGATCAAGCACGTCTTCAGAGAGTG-CATTAAAGAAAAAGAATCTGGGGGGGGGGGCGGGTGAGAGTGATCAAAGAAGGGTCTGCCCAATGTCCATGAAAACATAGCAGGCTTTATTTTCCAGTTAAACATGGGTATTAATTTATGCAAGAAGTTTCCTG-ACATTCCTGCATCCAACACAATAAAAAAC-CCAGACTAAAGAGAAAGAAGGAAAAGCAACAACCGTGGGAAGA--GACCAGGAAATTTGCAGTGAGCACGC-ATTCAAAGAAGGGAACGTATGCATCCTGAAAGATCTAATAGTTTTTCAAAAATGATTTTAGTGAATAAAGATGTCTGTTTCA--------CATCATCTATCAGAACTTGTCCTAAACGTAGGTTAATATAAGGGATAAGAATAATGTACGGGTGAGAAATATGGCTTCTCTAATTAACTTAGT-------TTCCCCTTTGAGAATATAGCCTGATGCATT s bosTau2.scaffold8034 5256 709 - 35197 TTCAAGAGGCTGAGTTATAGCAAGAACTCTTAAATCCTATTGGCTTCTTTTGATTGCATTTGCAAGTACCTCATGAAAATGTGCAAATCAGCCCATTCTCAGTGTTTCAAGCTTCCTGTTGATTGTGTGACAGAGTTGCCAAGCACATAACACATTTGTTTTATAGCACCACATGATGAACCCACAGTGTTTTACCTCCAGGACTGAAAGTCCTTAATTTGTTCTTTGAGGAACAGCCTGCTTTCA------------------TTGATCAAGCAATTCTACAGAAAGTGAAATTCAAGAAAAAGGATCTGGAGATATGGGTTAGTGAG----------GAAGTATCTGCCCAGTGCCTGTG-AAACATAGCGGTTCTTATTTTCCAATTAAACACATTTATTACTTTTTAAATGAAGTTTCCAGAATAGGCCTACATCCAGCATAACAGCAATCTCCAGGGCAAAGAAAAAAAAAATGAAACAAAAGCAAAGAAAACATTGATTAGTGACTCTGTACTGAGTGCTCTGTTTAAGAGAAGTCATATAAGTGTCAAAGAGTATATAGCA-TATTTAAAATATGACTTTGGTAAAACTTGCTCTCTGCTTAAGAATCTATTATCATTTTTTAAAATCCAGCTTAAATATGTTGTAGAGTAAG------GAAAAATATATGTACAATAGATACTGTTTTTCTGGTTGG-TTGGTATTAGAATTCCTCTTAGGGAATACAAC--AATGCATT a score=3855 s mm7.chr19_random 2296291 337 + 2598976 taaaaataaaattaaaattttaaattttaaGTA----AAAAGTCTGAAGACCAGGGCAA---TGAACTG---AAAGTCTAAGTGCAGCCTATTTGTTAAACAGCTCTATTTGTAAAGACACAAATTAC---TAAAAATCTAGATTCAGCCTCTG------TTGAACAACAAACAGACACAGAGAAGAAAACTGATGTTCCCCAGAGGCTAGAAAGTGAAGCAGAGATGTCACCATAAAAGGCAGCA-ACAGAGG---AGATACAGGATTCTTGCGAACTCAAGAGAGAGATGGAATTGCAAGATGATCTGTAAG-AATGCAGGATAGTCGATGAGACCCATTGTTCAGGtccctctctctc s bosTau2.scaffold8034 6478 340 - 35197 TAAGAATAAGGC-AAAAGCTTAAACCTGAGGTAGTGAAAAGGTCTGAGAAACACTGAAAAATCAAATTGTCTAATATCCAGCTTTAAAATATCTGTTGAGCAAGTAT-TTTGTCA---------TTACCTGTGAACAACCAGAAGAATCCTCTACACTCCTGGAACTACAC-CATACATAGA-----AAACTGGCATTTAGAAGAAGCTAGAAACTGGAGCAGAGATGTC----TAGTAAACATCACACATAGGGTAAGTCAAGGGACTCAGATAGGTCTAAATGAGAGATGAAAATCTGAGCTCATCTTAAAGTGCTGTGGGGCCCCAAATGAAATCCATTAAAGAAATCTCTTCCACTC a score=11781 s mm7.chr19_random 2304893 500 + 2598976 ATACAAGTAGAGGGAAGACCAGCTGAGAGGAAATAAACTAGAGAAGGTATTGGAAT-AAAAACAGGGTTCATACCATCCTGGGTAATTGCTTCTCATGG----TTTTAGTGAACATCAGAACTTACAATTCTA-AATATGCTAATGAACATTTCCATTCAAACTATGCACACTAATGAGT---GATGGAGAAGTGCAGGGCTTCCATTCA---------------------------GATCTAGTTTTCATCTACCATAGattaaataatattttattattGACTTGCTTTTAAAAACACATAC---------------------------CTATCGTGGTCAGAAAATAGTAATTCAATTTATAATAAAATAGAAGTATAATCAGAGAAGA----------TGAAAGCAAAATCTGAAATTTACTCACAA---AAATGTTTTAAAA-GTTAAATAAATCAAAATAAATCAGAGAAGTTTTTG-----------TTCATC------------------CAGTTTATAGGAATACCTGTGCCAAAGAGTCACTCCATTAATAAGATAACATTT--GTGAT-TTGACCATAGGTCAAGACTGTTCATACTT s bosTau2.scaffold8034 27066 598 - 35197 ACACATGGAGAGGGTAGACTA----AAAGGGAAGAAAGTGAAGAAAATGTTGACGTTGAAAACAGAGTTTTTATCATGCTGGGTAATTGCTTTCCATAGGGTCTTTTTTTTTTAAGCAGAAATTATAGATCCATAATATGCTAATGAACATTCACACTCACAGCGTGTGCTGTAATGACTCCAAGTGGAAAAGCATGCAGTTTCCATTCACTTTGAACAAGCTGCCAGATGAAATCCTACCTGGTTTCAAGCAATCACAGATTAAATAATATC-----AGTAGCTTACTTTAAAATACACACACACCccaccaccgttaccaccagcaccactaccaccacAATAAAATAGTATTCTGAATTACAGTAAAATAGAAATAGAATCAGAGAGGAAAAGGAATCTTTAGAAGAAATTGTGGAA-TGACTCCCAAATTAAGCATTTTAAAAGGTTAAACAAAGCAGAATATATTAGGGAATCTGATGGAAACCTCCTTCTCATCCTACTTTACTGTCAATTACGGTTGTTAGAAATGCCAGAACCTGAGAGGCATAACATCAATAAAA-AATGTTGTAGTGATATTAAGCACAGGACAATCCTCTTCACACTT a score=8565 s mm7.chr19_random 2305989 471 + 2598976 CTCAAGTACACACGTATTTTACATTTGTGTAAATGAATTTCCCATCACATGTCCTCACACTCACT-----AAAATACTACAATT-------TTTCGTGTCTTGGCACTTTGAACTTGGATTAGTTTTCTTGTTGTCTTTCCACGTCATTTTGCCAACTGATATGAGAAAATCTGAAATTAGAAACTATCCCGAGTGCT-GCTATTGCCCTTTATCTGGA---TGTGGACATTGCATAGCACAGCTGTATCTTTGTGTATGAGAGTTAT-TCTTCCTTCTTCTAGCTTCTCTACACAGGAACTAAATAGATTTGGATACTTGTCCTAATTGAAGCTGTATAGACAGTTCCCTATCTTAAGATAAAATCTGTTCTCCCTTTTTTAACCT--ATTCTAAGGAAATCTCATTATGCAAGATTGAAATAGTTCTTCCTTAACAATTCATAAATGT---TTTGATCTGGTATC--------AGGTAGTTTTACCTTCATGGGTACAT s bosTau2.scaffold8034 27706 465 - 35197 CTGGAGTATGGGTGTATTATACACGTATGTGAATAGAGTACCCAATCTAGCCCCTGCCACCCATCCCTTCACAATAACACAGTTGTCAGCATTTCAGATCTGAGCACACTGAATTTAAATCA-TTTACTCATGTTCTCCCCACATCATTTTGCCAACTGATAGGGAAAACCCCGG--TCAGTAAGTGTTGATAATTTTCATTATT--CCTCTGTCTGTGCCGTGTGACTGCAGTATGGTACAGACATGACTCTGTGT--GGTAGTCACCTCTTTTTTTTCCTGTTTTCTCCACTTAGGACTACAATAGATTTAGCTACTTGTCCTAATTG-------------------CTTCCTGAAGATGAA----GTTATTCTACTCTTGCCCTTCCTTCCAAAGAATTC----CATGCATGGCTGAGACAATACTTCCTCAGTCA--CAGAAATATACATCTTATCTAGTTCCCCAATTTAAGACAGTTCTATATTTATGTATACAT a score=5881 s mm7.chr19_random 2308353 482 + 2598976 AGTTCTCTTGCCCATTAGACTAAATAAGTCTGCAGCATTTGTTCTTGCCTGTCTTCCAGACTT------------------------AGTCACAGTATGTTCTTGTTTGATAATGTGTTTTCTGATCAGAAGGTGATCTTTCTATTTAGTTTCTCCTGCTTTCTTTCTAATGATACAAGGAATCATC---TAATCACATTACCAATGAATTTGGACCACC-TCTGTAGTTTTTCTTTATCAGGAAACAAAACTAAAGCAATACGTAGATGAGTTGCTG-TTAA--GGCACTGTACTAAAGCCAGACAT-CTTTCCTT-------TTCTAGCTTCTTTCCCCAGGTTTTTATCATCAAATGTAATTATAAGTGCTATTCATGTTGTAGGTACTAAGCTAATTATTGGGTTCGTATTATGTATAATAACAACATTGGTCATTCATTTAAAATATATCAAGCATATCCCTTTTAATGATATTTATGTATTTCACTTCATTTTGtttcaactggcataaagtaaa s bosTau2.scaffold8034 29564 493 - 35197 agctcccttagccat--gaaggggtggaactgaggtgtttgttctagtctgtctccctgagttcccttatggcattaagtttcagttacctacagtagaattctgcatgataatgcaccactttactggctgcttttccttctgtttaattt-tcttactccccttctagcatttcctggaatcaccacctaatca-ataacctttgtactcgaacccttgtctgagggtcttgttctgaaggaaatcaaattaa-----------gaGGAATTAATGATTCATCAGCCTTGTGCACTTGCTAGCAATTCTTTCCTTGTAAAATTTCTCACTTCTTTCCTTTTCCTTTTATCTTAGATGCTAACGCAAAGTGTTATGTATATGACCGGCAC--AGTTAATCATTATATTCTCACAGAGCCTAACCACACTACTGTTCACTCAGCTGCAATACATCAAGCA---CCC-------AAATTTTATATactgtgctcagtgctggaaatactaacataaa-taaa a score=8969 s mm7.chr19_random 2309358 644 + 2598976 AAAGCACATAATCTATATTTTTCAAAGCCTCATAGTCTCTAAAGGCAAAATAGTTACTAAATGGTGACTGACATTAC-ACACAAATGATCGGACCTCCCCCAACAAATAGTACTGAAATACCCAAAGAAAAT--GACATCTTTATTTTCTCCATG----------------TTCATTTGTACTGTCTTATTATGCTCTTCTTTTTCCTTGTGCAG----GCCAGAGAATGGCTGAATATATCAATAGCAATTGATATAT-TCTTAAGTAACACTCTGAAAGGATTCTAATACATCATCTTTGAAGTG--------------------------------------CATTATGATGTTAAGATTACACATCTCACCTCGGGCTGAC--ACCAGGCAGGGAACAGGAAAGAAGTTACA-GTGTCTGTCATCACCACTAAGAAAACAGCTGAAACT--CCAC-----ATGGGACAAG-AACAGCGTTCAATAGGTAAAAAGTTCTTTTTGGCTTGTTTTTGTTTTATGTTTAAATCTTCACTCACTAATAATAAATGTTCCAGGGAACATT--------CTCTTCAGCAACCAGAAAATTGCAA---AGTCTACACAAACTGATGTGAGTAGTGATTTTCCAGATTATCTATATTTGTTCTGATAAAATCAGGCTAGATAAATAACAGACACACAGACTAACAGGCAAATGATAAAGATAGATG--gagggat s bosTau2.scaffold8034 30064 684 - 35197 agaacatacaattcctgcctt-cacaattttatagtccccagagaagaaatacttAGGAATTGATGACTACTAATATTAAGTAAATGCTTGAAAA-CTCTCAATAAATAGTTCCTGAGTACTTGAAGAAAGATAGACATCCTTCTCATCCCCATAATTTTCCTTCTTTCTTTTTATTTTTGCTGTCTT------CCTCTCTGTCACTTCATACAGCATCGTCAGAAAAGAGC----------AAAAGCAGTGAATACAGGTCATAAATCACATGTTAGGAAAACCCCTGTTTGTTGTTTCTGCAGTGAATGTAGGGTCTATTTGACCCATTTGTTTAGAATAATGCATTGTGAGCCCAAGATTATAAATCTCACCTTGGGCAGACATACAGAAAAGAGAGCATGAAAGAATTAACACCCGTCTATCACCACTGCTAAAGAAATAGTTTAAAATTACCACTCATGGTGGGATTAGTAAAGGAGGTTGATGCATAAAAAG------------AGTCACTTTCCCCCTTTCACAACTTATCTTGTTAATAGTAAAGGTCCCTTGGGAAAGTCATCGTCACTGATCAGGGATCAGGAAAGTGCTACCTAGGCCATAAACATGAAGCTGAGCAGTCCTTTGCCAGATTACCCATGATTCCTCAAGTGAGATTAAATTAAATA----------------GCTAGCTAGCTAAACATAAAGATATATATTGAAGGAT a score=35482 s mm7.chr19_random 2310871 2195 + 2598976 ACCATGGTCATA-CGAAAGATAACAATTTAAAGTTAAGAAATACTAACTATCTGGAAAACGGAGAGAAGTGACCACTACTCTGTCATAATAAAAGGAACATC-CATTTCTATTGAGTTGTTTGATACTGAACTGTAGGCAAAATACAGCCTG-AGGTTGTACTCCTGGGATTAAGGGCTAAGGGGCAG-AAATTTGAAACTCAATTTGCA-GTTTTATAAATTAGCCATTGAGGAGCATATGTTAGG-----ATGACCATGTGAAAACTCTATAAATAG------------TGAAATAGATAACATGAAATTAA-----TCCTTCTTGCCCCATTA----ATTTGGCTTTAGACAACAAGAAAATGAATCTAGCTATATTTacacacacacacacacacacacacacacacacacacacacacacacacaAATATACCAGTAAATCTAACCCACATTATCAGGCAAGAACATCTTATGTCCCCATGGAAAGTCAGATATAATA-----------AGTAGTTTCCAAAGACAGCCA-TAGTTATATAC----AATAGACACACAAAGATGAGGGTTATCT--CAAGATATTCTATATCTTTGCAGTATTGTTAA---CAAAAGGACATGCATTATGGTAGAAAAATACAGTCTTGTTTTTACTTTTCCATTATACATA----TCTATAAGAAAGCAGAAACAAACTCATT------TTCATCTGTTT---AGAAGCAATATAGTCAAACTCTCAGACACTATATACTTTGCACAATGTCACGT-------TGGTATTTCAAAAAGGGAAGACATTTGAAGCTTTCTATGTAGGTGTAATTCAGGGTAGTTCAC-TGTGTGTGTTGAGGTGCAGGAAATAAATAATAGGCTTAGCAAATTTCTAC-AGTCTGTACTAAGTAAAGGGAAGTGGCTTGGATTAATGACTATGTCGAAATCAATGCCATCCTTTTTCCCTTTTGAGTGTGTCTGGGACTTCACACTAGGCTAATAAAACGTTGCCTGGAAGTCATCATTAGAGAAACTGCTTTACTAACTAAGAATGTAAATAAGAAAAAGTCACAATTTGCAGTGTATTGATTGTTTTAAGGGATTGTCTCAAAGCACAATTTACATAAACTAATTAAGGATGAACTCAACAATCTTGCTTCTATGGATAACCTCAAGCCATGGGTTCCTATCCCTGCAGAGGA---ATACTGCAAAAGTTTCTGGATATTCACACAGCAATTCTTACCACAA---ACACTTCCAACACAATAAGGATTCTATG-CCATAATGTTGATATCATATCCACTATAC-CATACCATGTGTCCAAATTAAAGTAATACTGAGACTTCCCTTCAAACAAGTATATATGTATATATGTATAAATGTTGTTAATACTTACCAAAGAAGAAACAAA-----TATACATTATTTTGT-TCCTGTTTTCTAGATCCTGTAAAAATATTGTGTCTGTCCAATAGGAAATAGTGTAGCATGATTTTTTTATTTGCAAGATTTTAATAGTAAAGTTTATTTTAAAAGAATATTTTCAATATTGCAAATTAAAACATCTCCAAAATACCAGAACTTTGAACACAGATGCTGTCCTCAGGGAGGAAAAAAGAAGGGGGAAAAGAAAAAAAAATGAAAGCAATACTAGAGCTTGTAACTACTAAAGAATAAT--TTTGAACAAAGTTTT-----GTTTAGGTGATGTAAAATTAG-TACCATATAGAAAAATGTGAGCCTGTCATGATGTAGTGATTCTACAGTCATATGCTGGTAGTTCAGTTTGAGACAGATCAGAGAAGACAAAATTAAGACAGCACCTTTGCAAACACAATTCTACTAATCAAACTATGTGGTTGGGCAGCAAACAAATG------------------------CATCTTGCCAGGGCATTCTTCTTAAAGAACTAAGTAATAGTTTATAGTGGGGACAGAATAATGCCT------------AGTCAAAGAAAATGGGCATCACGTTATGCAATGAAGATCTTCTCTTGGCAAG------------AAGCTGCCACTGGACTTA-TCAGAATCTCATGCCACCAAGTACCTAAAGG-------------------------------------------TGAATTTCAACCTATTT-----------------------TATGTATTTTCT-----------AAAACCACTGAATTTTCCTCTGTTTTGGTTCCTTTCCCATTTTAATCTGAGCCACAGAGGAGCCCACATAGCATCCAGGATAATACAGAGGCAGGAGGA-------AACTGACTCCCTAGATCTCATCAA-ATTGGGACAAAGGACTTCAACTAGAATGGACTGTCCTGATAGTTTGTCT---ATAACATAGTGCAGTGGCTGTTTCTTTGG s bosTau2.scaffold8034 31842 2243 - 35197 ACCATGATCCCAACTAGTGGTCACAATATGAAGACCTCAAATATCAGGAGGTGGTAAAATACAACCAAGTGGCTACCACAATGAGGGCTTGAAAGGAAGATCATATTTCCCTTGAACAATTTAATACT---CTATTGGTCTGATATAGCCTACAATTTGTGTCCTTGGAATTAAGCACTGAAGGAAAGGAAACTTGAAACTAAACCAGAGCATTCCTCGAATGAATTGTTGATAAGGAGATATTGTGTTTATATGATTATG--GATGCTATGTTGCTATGGCTGCCATGTCTGAACAAGATACAAGGGAAACAGGAAGCTTTTCATGGCCCTACCATCTCCTTCAGTTTCGGACAGCAAGAAAATTCACTTCTCTGCATCCATGCATACTTTTATATAGACACAGACCCACACACACAAA-----------------------------------------GACAAGAACATTTTAAACCCCTATACAAAGTCACACATAGTACCTATGTCCCTGACAATTTTCAAAGCCAGTCACTGGTTAAATACCAGGAATTAACTAGTGGCGATGAAATGTATATTACATCATATTCAACAATTATGCATCACTTCCAAGAACAAAGGGACAGAAATAATT-TATAAAAATACC------TTTTTTCTCTGTAATTATTTGTAGTGACCTTTTAGAAAATAGTAGTAAAGTAACTGCTCCTTTCACCTTTTTGCTAGAATCAACATCA-CAAACTCAGTAACACTATACATCTTACATTTTGTAGCATCTTTTGGTAGTACTTTGAAAAGGAAAGAAGCTTCAGGCTT-ATGTGTTTGTATAATTTGGGGGATTTTAAGTGGGTGTGCTGAAGCAGGGAGAATAAATAATACATTTAGCAAAACTCCCCTATTTTAAACTAACTAAAAGGGAACGTCCTGAATTAATGACTGTGTTGAAGTCAGTGGTATC-TCTTTCCCTCCTGAGTATGCTCAGTGCCTCACACTAGGCTAATAAAATGTTGCCTAGAAGCAGTCATCAGAGAAACTACTTCACTAAGTAAGAATGTAAATAAGAGTAAGTCACAATTTGTAGTGTATCGATTGTTTTAAGGGAATATTCTGAAGTAGTATTTACATTAATGAATTGAAGATGACCCTAACAAACTAGTTTATGT-GATAAAATCAAGCCATGAACTCTTATAACT--AGAGAACTCATAGTCCAAAAGTTGTTAGACATTTACACAGCAAGCCCAATAAAAATATATCATTTCAA---AATAAACACTACACATCTACAGTCTTGCTACTATATCCCTTTTACTTATAC----TGGACAAAGAAAAGGAGCATTGGCAATTTGCCATATACAGATACACACACATACAT------CCTTTGTTGATATTTAGCACAGAAGAAATAAAAACCTCATACATTTTTTTTTGTCTTGCTATCTAGGGCCTAAAAGAATATCATA-------AAGGGTGAAAAGTACAACA---------------------------------------TCTAGAAAAA--------------------AATACATATACTAATAACCA-----------ATAAATG--GCCCCTCTGGAAACAAAACAAAG-----CAAAGATAAATAACAAAAACAATA------TTTTTTTCTTCTAGGGaataataatttaaatacattttttaaagatttaaaaatCATGATATCAGAGACCAAAGAAACAAATAAAAAACCATGGCAATG----------ATAGTTTTGGGCAAATATT---GATGAAGAGATGTATTAGAAGAC--AATTAAAAGAGCATCTTTAAAAACATGATACTACTGACCGAACTAGGAGCC----CAGCAGGCAAATGCCAAGAAATAAGGGTCTGATATTTCCCCTTTCCCCGACATTTGTATTCAAGAGTACTGTGATTTTTCAAATGTGGGAGACAGCAGTGTCTATAATCAAAACAAAACAAAAACAATGCATTTTA-GATGTGTAATGAAGAGTTGTCTTTGACAGGCACAGAGAACAAACACTGTTCTTGGACTGATTCAGGATAACTTACCACCAATTCTATAAAGAAAGATAATATTCAAAGTCATACAAAAATATATGGTTCTTTGTTTCAGTTTGAGCCAATCTCTGTCAGTTATCAATACAGAAAATGTGAATTATTTTTATCATTAAAAAAATAACCGAAATTTTCTCCATT---GAGTCTTGTCTGCTTTCAGTGAAATTTCAGAGGATTTTATGCAGCCTCCAAATAAACATCAAAGCTGCAAGAGTTCGTGAAATGATTTTCTCAATCTCATAGATATTTAGAAACCCGGTTTCAGCTCAAATAAGCTGTCCTGATTGTATCTCTTAAAGAACTTAGCAGAGTGGATGTGTCTTTGG a score=19373 s mm7.chr19_random 2313736 618 + 2598976 AATATGGAGACAGTCTACAGAGAATATATTTTGAGGCT--TTAAGTATAGTCTCTTCTGGCCTTGCAAGAATGATAAAGAAGACAGTCAGACCATGTTACTGTCAACTCTAGTAAAATTGCCAGTGACATGGACACTTGAGTTGTTGAAAAATGTACGGAGTCTACCCATTCTTTTAAC-CCAACATTTAACAAAGCTTTCTGAATACATTACATATGGCATGTATCAACTTCTGACATTTGGCCAATAATGACGGATAGAAATTCAACTTGGAAAATTAGATATGAAGGGCATACTAAGCCATTAACAATTTTTATTATTTAACATTAGCAGCAGTACACAAGTAATCTAGTGTGACACAGTTGGTGA---AGAG----ATTGAAACCATTGTGGCCATCAGGAATTCAGGGAGGGTGTTTACTGCAGAGAAGGATTGAG-------TTTTCAGTGCTTTCCGGAGTTATGGGGGGG-------AGGGGGCTAATCAGTGTTCTGCCAGGGCCGCAATATATACAGGCCATAGTCCCAGAAAATGAAGATTGCATCAGCCAGAGAAATGTAGTGTGTTGTTGCTA--AAGCTAAGTATTTTCATTAGAAAAACAAGTCACCAATAATTAGATATCATTGTTCA s bosTau2.scaffold8034 34238 633 - 35197 AAAATGGAGAGAATCTGAAGAGAGTACATTTTGAGTGTAGTTAGTCCTTGGCTTCTCTG--CTT---AGGGTGGTAAAGGAGA--GTCAGGCTTCATTAATGTCAATGCTGATAAAATTGCTGGAGACATGGGGACTTCAGTTGTGGAGAAGTGGGCTAAGTCTACCAATTCTTTTAAAACCAACATCTAACAAAGCTTTCTGAAAATATTACATATGGCATGTATCAACCTATGACATGTGACCAATAACAACAGATATAAATTTAACATGGGAAATTAGATATGAAAGGCATACAAACTCATTAATAACGTGTATTATTCAACTCTAGAGACAATGCACAAGTAATTAAGCACGACACAGTCAGAGGGTCAGAGGACAGTTTTGACCACCAGTGGTGTCAGGGGTGCAATGCAGGAATTTACAGTGAGGGACGATGGAGGTGTACCTTTTGAGTTGTTGGAGATGTTTTGGGGGAAGTTTTCCAAGAGATTTGATAGTG----AAAGGAGCCATCTTGCATATTGTCAAGATTACATAGGAATGAGAAGGCTGGTAGCAGGGAAGAAACAGAGCTTTATTACTGTTGAGAGATATGTTTGCATTAGAAAGGAAAGTCAACAGTGGATAAATAATCTTGTTTA a score=8743 s mm7.chr19_random 2327774 396 + 2598976 ATAAAATGAAAATTAAGGGTTGAAGAAACTTTGCTATAGCCTGGT-ATACTTTGTACTCCTTGCTAGTTCTTCATTCTCCTTTCCCTTGTGTGTGTATAATTTCCTATCAATGATGAGAGTGCTTCCATTGGCTGCTATCAAAATTTC-----AGTGATAAGATTTTATAACTAAGTGGGATTGTTAAATCAAAGGTAGTGGTAATCACAGAATATGATTCCCGATTAACAAT----AGAAACCTCTCATCTTCC--------CAAAATA--------------------GAGACTTCAATATACACACACGCATTTA-----------AGTGCTGAATAGAGTCAGTGCTCAGAGTTCCCTGTATTTTATGAGCTTTATAAATTTCTGAGGA-------TCATGTAAAATT---CTTGGCATGTGTCACCTAGGTAGGTT--AAAAGAAAAAAACA s bosTau2.chr24 15971334 436 + 45245742 ATGCATTAAAAATCACAGGGTTTAAAAATTTTCCTACTTATTGATTATAATTTGTCCCACTTGACAATCTTTCATTATCCTGTTCCACAATTGTGTA--ATTTCATATC---GATGAATCTGCTCCTATTGAGTTGTATCAAAATCTTCCAATATTGGTAAGATTCTGAAATTTGGTAAGCTGGCTAAGGCAAAAGTAATGATAATCTCAGAGTA-----CCTGGCTATTAATTAAAAGAAACCTCATTTCTCCCATTCAAAACAAAATAAAAGCAAAACACAAAAAACTAAGCCTTCGAAACAAGTATACACATTAAAAAATCAAAAGAGTGTTGATTTGTAT--GTGTCCAGAGTTCCCTGTAT---------TTTGTAAATCTCTAAAGAATATTATCCATGTGAAACTAACATTGGCATATGCCACCTGGATGTTTTCGGAAATAGTAAAACA a score=42576 s mm7.chr19_random 2328505 1264 + 2598976 GAATTTTAAAAATGCTAGGATTCAGTGAGATCAGTCATTTCAGGGGCAAATGGAAAGTGCAGGACAGAAGTCTTACCGGCTCTCGCAGAAGTATCCCCACGTTTGTTATTTATTTACTCGCCGATTCCTGGAATGATTAtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTAGCTTAGAATAGAAGTGAGTGACATTGTTTGGAAGGTG------------------GGAAACTGCAGCACTTAGGGGAGAGAGGACAGACTCT----------------------CAGTCCCAAGCACAGGAAGAGTGCCGAA-CAGGCTAAACATTATAGACCC----------------GAGGTTCTTTCCTGGACCAGGAAAAAAAAATGTGGGGCTATGTTGACGAAAAGTCTGTAT---------TGACGTGCTAAAAAAACTGTCATGACAGTTCATAAAATAATTAACCCTAAATGCCTAGGAATACGTCCACCAGAAATGCTTACCGTTGCTTCATT---TTAAATTCTGAATCTAAAGTCACTGTCAA--CCCGTGTCTTTCTCTCCAGTCAGTACTACTTAGCACAC-GCCAA-GTATTAAGCTACTTTCTGTTTATACACCCGTGACCGTGTCACAGGCATCACGGTACGGTT--AAGAACAAAT----------------------CTTACCTTCAT--------GTATTTCAAGTGGGATCCATATTATCTCCTAATTACTAACCCCCGCATCATTAATAA-------TGCTAAATGTTACCC---ATAAGATT---GTAATGTAGAATGTAGGCACCAATATTTGGAGAGCCCCTTTGAAATCT-CTATCT----------TTTCTCTGCCCCCACTAATGGATTTAAGATGATTAAATTGCAAACGGCAGGACTGCAAGGTGATGTTTTGACAAAATGAGCTTGGTTGTTTGGAAGCAGCCCCGGAG-CAGCCACTCTGAATCG-GGGCCTTGTGAGTGTCTCTGTAAAGCAGATAGAACTTCATGATATATTTAAATCCTTTTCCGCAAACATTTCCCTGATTTGTTGCCAAGCCATCACTGAATTTAGTAATCCAGACAGATTACCAGAGGGGGCCTATTTTTAGGGTCCGTCTGTTGCTGTGGCGGTTGCAGCTGATCGGATTATGGCTCCATCCTACCCAAGTAGAATGCATTGATGCTTCAAGAGAAACCT-CACTCCACTCCTGTAATTACAATGTCAGACTCTGAGCTGGATATTTCTCTCTGAATTTATTTTGTAGCTCTGTTGTGGCCAATCCATTATTAACTCCTGAGACGGTGTGTTGTCCTTTAGCTTTGCTCTGAGCctctctctc s bosTau2.chr24 15971787 1323 + 45245742 GATTTTTCAGGGTTATAGAATC---TGAATACAATAATTTCAAGGGCATATAGAGGATTTAGAAGAGAAATCTGGCCTGCACGGGATGAAAATTTCCTCTGTTTGTTATTTGGTCACTCCCTGGTTCCTTTAATAGCT-----------------------------------------------------TTTCAGTGAAAGAATTAAAAGAGAAGAGCAGAGGATTGTTTGGGGAGTGACCAGGACAAGGGGATAGGGGAGCTGCGGCCTCTTGAGAAAGGGGAAAGGATTCTGAAGAGATGGGAAGAGAGTTATTAGACCCAACTATGGAAAGAATATAAAAACATTCTGAATCCCAGAGGCTCAAGCAAAGGAAACCTTGGGGAGCTTTTCTGGACC-TGAAAAAGGAATAAGGGCTGA----GAAGCAAAGGCAGAATGTAATTTCCTGACGTG-GATAAAAACTGCAATAAGAGCCCACAAAACAATTAATCCTGAATGCTGAGAAACAGGTACACCAGAGG-ACTTGTCTTTGCTTTATTCAATGAGATTCTGAATGTGAGTTCATGGTCAAGAAAAGTATTTTTCTCCTCAGCCAGTAATA----GCACACAGCTAACATACTTAACTCCTTTCTGTTTATATAGCTATAAATGGGTTACA--CATCTTTGTATAGTTTCAGaaacaaataaacaaacaaacaaaaaaaACCCTTACCTTTATTTCAAAAGATGTTTTCACAAGAATCCATATTATTTCCTGATAAACTCCTCTACTACCATTAAGGAAAAAAAGTTGTAAAGACTTCATGGTATAAAATTTGAGTGATGTAAAAAGAGAGTGGTGTAGCTTGGC---CCCTTTTGAAAGCTTCTGTTTGGTTTTTGTGTGTGTGTGCCTTCATTAATGGATTTAGAATCATTGAATTGCAAAAAGAAGG-CAGAAAGGTGATGTTTTGACAAAATGAGCTCAGTTGTTTGGAAGCGGCCCCTGAGGCAGTAGCTCTGAACTGAGGGCCTTGTGGATTTCTCCATAATGCAGATAAAACTTCATGATATATTTAAATCCTTTTCCGCAAACATTTTCCTGATTTGTTGCCAAGCTGTCACTGAATTTAGTAATCCAGACAGATTACCATAGGGGTTCTATTTTTAGGGTCCTTCTGTTACTGCGGCAGTTGCAGCTGATCGGATTACAGCTATATCCTACCCATGTAAAATGCACTGATGCTTCAAGAGAAACCTGCACCCCACTCCCGTAATTACAATGTCAGACTCATTCCTAGATATTTCTCCCTAAGTTGATTTTGTAGCTGCACTGTGGCCAATCCATTATTAACTTACTAGACGGTGTGTTTTCTTTTAGTTTTGTTGTGCGCCTCTCAATA a score=5645 s mm7.chr19_random 2329849 135 + 2598976 TAGGTAATAGTAAATTCATGCTATGGGTCACAGAGGACATATATAATTTTTCTTACTCAGAGGGCAGAAAAATAAATCACCCAGCCCCGCAGCCATGGCTGCCTTCTACACATGACAATACCGCCATCTAGTGGT s bosTau2.chr24 15973157 125 + 45245742 GTGGTGATGGAAAATGCATGGTGTGGGTCGCAGAGGAC--ACAAAATTTCTCTAATTTTGAAGGCAGAAAAATGTGTAACCCAGCCT--------TTGCTCTCTGCTATAAATGACAATATCTCCATCTAGTGGT a score=7483 s mm7.chr19_random 2330067 565 + 2598976 AATAATCTTAACCATGATTTTT-ACAAG-TATTGTAAGTCAGGCAGTTAGAAAAATAAAATGA-AATAACAAATTGAATTAATTTGTCAG----TTTTGGATTTGGTAAAGAAGAAAAATACCCAATAA-TCTCACATCTCTTATTAAATGATCTGTCATCAACATTCCGGCTATTACAGCCAAAGAAACTAATGTATATTATGCACATATAAACAAATAAA---CATTGTTTTACTGGAAGAAATAAGAACTAGGTCAGATTGCTGAGAAATGTTTTTCTA----ATAATTTATCACAACTATAGTCTCCAAGTTGTTATGGTATGAACATAGTAATTTTAAA--ACCTTTTTCAAATATTCTTGATTACATTATTGTTATTTGTTAATGCAAATTCAAGATGGTTGTATCTACTGGTCGAATTAAACAGCTTATATATAGTACTAAATGTACTTTTGTTGAGAGCGACTGTCATCAGGACA--CAC-GTGCCCGTCTCAG----CCACCAGGGGGCAGCATTGTACTGCTTCAAAACAACCCAGATCCTTTTCCTGCGCTTTGAGCACAACCCAATTCGGCTTTGCT s bosTau2.chr24 15973734 529 + 45245742 AATAATCTTTTTTGTGATTTTTTACAAGGCTTTGGAAGGGAGGCAA--AGTATAAGGAAATACTAATAACAAGTGGATTTAATATCACATGGATTCTTGTATTTGGTCTA------ATTTACCCAACAAATTTTTCATCTCCCTATAAAA---CTTATATTAATTTCATAGTATATAGATTCCAGTGAATTAGTATATATTATACACACCTAAGCAATTAAATTACATTATTTCCTTGAAAGTA-TGGATGCCAAAGAAGAATGTTAAGA----TTTTCCCATTCTGTAAGATATTGCAACCTTAATTTAAAAGTTCTTGTAATATAAAGTCAATAATTTAAGGCTGTCTTTTACAAATGTTCTTGATTA-----TTGCTATTTGTATTTGCAAACTCAGGATTGTTTTA-----------AATT---CATCTTCCAACTCCTATTAAG-------TTGTAGA-----------ACCAAGACAGCCACTGAGCTTGCAGCAGATTTCCACCAGGTGGCAGCACTTTTGTG----GATACATTCCAGATCCTGGTCCTAAGACTCAAAT---TCCCAATTTTGGTGTGCT