##maf version=1
a score=1592
s mm6.chr8_random    140419 124 +  24571640 CAAGCATGTATGCTTTGAGCTTTGAGGTATTCACACCTCTATTACCTTTTTATTTTTCCTT-------GTATTTATCTGTTC-CTCTTCATATGCATAACAGA----AGCTCTTGTATATTTCACACTCTTTCCTG 
s fr1.chrUn       317384328 133 - 349519338 CAAACATATATAAGCTGAGAATGAAGGAATTCACATCGCTGTAACCTTT---TTTCCCCTTTAAAATGATGCGTGTGTGTTCTTTTTTTAAAGGTGGAATAAATTTCGGGTCTGATTTGTTTGTCTGTGTTCGCTG 

a score=7071
s mm6.chr8_random    140601 159 +  24571640 TCATATAAAATTTCACAACATATGTGTGTCTGTGCACATAAGTACCCACATTTGTGCACCTGTGCACATATGCATACCCCtgcgtgtgtgttttgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 
s fr1.chrUn       317384577 140 - 349519338 TCCTGTCAGGTCGCATAGCATTtgtgtgtgtgtgtgtgtgcg----------tgtgcgtgtgtgcgtgtgtg------cctgtgtgcgtg---tgtgcgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgcgtgtgtgtgtgtgcgtgtgtgtgtg 

a score=16062
s mm6.chr8_random    141374 597 +  24571640 CCCTCCA--TACCCTACCCCACATTAAACCAGAATGATACTTCCTATTTGCTTAGGCCACCCTGTGCCCCATCCCCAACAATCTAGGAGGAGTACCAGCCCTAAATTTAACAATCCAGCCCTAGCTTTTCTA------CACTTCCTACAGACTTCTAAACAACACAGCCTAATCTTCTGCCCAATCGCCCAAAGCTTATACTGAATTTTAGTAGCAAGCAAATCTACTTATCCTAACCTGAACTGGAGGTCAACCTGAAGAACCCCCATTTATTATTTTCAGACAATTAGCTTCTATTAGTTACTTCTGCATCATACTAATCCTAATACCAATCTCAGGAATGATTGCAGACAAAATACTAAAATGAAGTTTATGCCCTGATAGAATAAAT--ATTACCTTGGTCTTGTAAACCAAAAGTGAAGAGCT---GTCTTCTCCAGGCATCAAGAAGAAGGAGTATC--TCCCCACCATCAACACCCAAGGCTGATA-TCCTAATTGAACCACTTCTTGAACAGTACATAAAATTATT----------TAATAAATAGAACATTAATGTA-------------------TATCGTGCATTAATTTAT-CTACCCATAGCAAGTAAATCAAGTTAATAAAATAAGACA 
s fr1.chrUn       320905768 629 + 349519338 CCCTCTAGTTACCCCCGCCCACATTAAACCAGAATGGTATTTCCTATTTGCATACGCAATTCTACGGTCTATCCCCAATAAACTAGGAGGAGTCCTGGCCCTTCTTGCCTCAATCT-----TAATTCTTATAGTAGTTCCTTTCTTACACACCTCTAAACAACGAAGCCTAACATTCCGCCCACTATCACAATTCCTATTCTGAACCCTAATTGCCGACG----TCGTCATCCTAACCTGAATTGGAGGCATACCCGTCGAACATCCTTACATTATTATCGGACAAATTGCCTCAGTACTTTACTTCTCTCTCTTCCTAATCTTGATGCCAATAGCCGGTTGACTAGAAAACAAAATACTAAACTAA----CAAGCATTAGTAGCTCAGATTCAGAGCGTCGGTCTTGTAAACCGAATGTCGGGGGTTAAAGTCCCCCCTTATGCTCAAAAAGAAGGGACTTCAACCCCCACCACTGGCTCCCAAAGCCAGCATTCTTAATTAAACTACTTTTTG-ATAATACATATATGTATTATCCCCATTCATATATATTAAACATTAATATAATGCATAACTAAGACATAGTACTATATATTCACCTATAATTCCTATAACCCATAAAGCAAGTACAGAAAACTAAAAA 

a score=4528
s mm6.chr8_random    832352 254 +  24571640 cacacatgcacacacacattcacagacacacatgcatacatatgtatgcatgcacacacacacacacatacagacactctcacacacatatacacatgcatacacacaacccatacatgcacacacacacatatgcacagacacacCTGA-------------------GTACCTATGTATAGATG-------CACACACACATACAAATACACACA-------------CAATTCAATTTCTCATTATTCTTC-------AGTAAGGACAGTGTCTGTAGGAGCTTCACTCCCCAGGGA 
s fr1.chrUn       190072333 271 + 349519338 cacacacacacacacacacacacacacacacacacacacacat-----------cacacacacacacacacacacacacacatacacacacacacacacacacacacTGCCC-----TGC-------------TGCTCAGAAATAGCTGATGGGTGTCATTTGTTTGTTGTACACATATGTAAAAGGACAACACCCACTCGCTTGCAACCACATGCAACCCCCCCCCCCCCCCTCCACTAACTGACAATCCCTCCAGACACAGTTATTAGATTGGTTCTGGGTTATCTGCTCACTGGGGC 

a score=2413
s mm6.chr8_random    832661 63 +  24571640 CTACCAGCTTTTTCTCTCCTCAACCTCCCCCTACCCACCCCTGTCTCTTGTTAATTTTTCTTG 
s fr1.chrUn       190072654 63 + 349519338 CCACCAGTTTTTACCCCTCTCAACCTCAACCCTCTGGCTCCTCCTCCTTCTTTATCTTTATTG 

a score=14163
s mm6.chr8_random    835860 375 +  24571640 TGCGAAAGCCTTCTAAACAAGGCTGTGAATTGGTTTTCATGCTCGCATTGACAGATTGGGAAAGCAGTTTGTTCTACCAAATTTAACAATGATATATCATTATCACAACTTTG-GGGGAAATCTATAAAATCAATAAGTTTGTAGCCTGAACAGGATTTGTACGGCTCGCTTGCTGTGCCGGTGTCAAAGCGCGAGCATATGGATTG-AGTCACAGCCTGAGATCAATGGAATTTGTGGACAGTCAGCTCAATAACAAGCCCTTC----------------TGAAAAGAAATAGATGTAAAAAGCAAATT---TACTAGAGTATAAAAAAAAAAAAAAAGCTAATATCTTTTCCGCGCCTGGCTGTAAA-GTCCTGTTTGGCTGCTGT-GGGCTGCGG 
s fr1.chrUn       152235386 381 + 349519338 TGCAAATACGTATGGGGCAAGACTCCGAATCAGAGCCTTCGGGGACATCGACAGATCGGCAAAGCAGTTTGTTCTAGCAAATATAACAATGATATATCATTATCACATCTTTGTGGGGAAATCTATAAAATCAATGGGTCTGCCGGTGGAGCAGGATTAGTATTACTAACACGCTGAGAGAGTGTTAAAGTGCCTGAGTATGGATCCCAGTTGTGGCTCG-GATCAATGGCATTTGTGGACACTAAGCTCAATAACAAGCCATCCAAGAGCAGGTTAGAAGAAGAAAGAAATAGATGTGAAAAGCAAATTCGGTGCTAGAG----------------AAGCTAATATCCTTTGCACGCCTGGCTGAACATGAGCAGGGGAGCCGCTGGAGGGCTGCGG 

a score=4904
s mm6.chr8_random   3474444 174 +  24571640 AATTTTTATTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtttgtgtgtgtAtatatat-catgtgctagtgggtccctgtggaggatagtagagagca----tcctatcttctg--gatctacaatttcagatagAAATTTTAAGTTTTCTGGtgttgcctagc 
s fr1.chrUn       319455676 178 + 349519338 agtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacgtgtgtgtgtgtgcgtgtgtgtgtacgtgtgtgtgtgtgtgtgtgAGGGC---TGTAGAATAGAGGATAACAGGGGTCCTAACTGTTGCTAGTCCATCATTCTTTCACACCATTTTACATTTCCTCCTCTCACATGAC 

a score=490
s mm6.chr8_random   3474757 694 +  24571640 tgtaaaataaaaaatagaaaaataatttcca--cagacacattatattcataactaaagtgtatctgtatccctacactgcatccctATGCTTCATGCTTACACTGCATCTCTATGCTGGACCCCTACACTGCATCCCTATGATACATTGCTATGTTGTATCCCTACTCTGCCTCTCTACACTGAATCCCTACTCTGTATCCCTA----------------------CATATACTACAT--CTAAGCACCACATTTATACC-TATGATTAAAATGAAAGTTCTTCCT-CATTTTCAAGGTAAAATTTCCTGTTTTGTTCTTTCTCTTTCACTCACTTTCTG----CTTGAAGTACATC----TATTATAATCTC------CGATTTTAGCATACATTTTTGTTAGCATTACattaacataattaacaataat-------taacaaaattaaGTTTTATGATGACATTTACAGACAAAATTTGTTTTGCTAT-TTCTCTCTTTGCTATCT----CCACTGTCTCCTCCTCACCTTCCTTAATATCCTGTCCACTTTCACATCACATGCATCCTTTTCC--CTTCTCTGCTTTCTCCATAACTCTTGACACCGTCTCATAATC-----------------TCCTATTTAGACTCACAGATTGTACCCCTTTTCA----------TACCCTCTGAT-----TTAAGATATC-CATCTACAGAAGAATGGAT------------AATGAAAACACTCAAAtctctctctctctctctctctctctctctctctctctct 
s fr1.chrUn       319456038 764 + 349519338 TCTAAGCTAATCAGCAGGAATAATCGCTCCATCCCACCTCGTTAGCACCACAACTG-------TCTGCTTC----------------ATGCTACATTCTCATGCTGCACTCTCATGCTGCACTCTCATGCTGCACTCTCATGCTGCACTCTCATGCTGCACTCTCATGCTACATTCTCATGCTGCACTCTCATGCTACACTCTCATGCTGCACTCTCATGCTGCACTCTCATGCTACATTCTCATGCTACACTCTCATGCTACACTCTCATACTACACTCTCATGCTACACTCTCATGCTACACTCTCATGATACATTCTCATGC-TACACTCTCATGCTACACTCTCATGATACATTCTCATGCTACACTCTCATGCTGCACTCTCATGCTACATTCTCAT----GCTACATTCTCATGCTACACTCTCATGCTGCACTCTCATGCTACATTCTCATGCT-ACATTCTCATGCTACACTC-TCATGCTACACTCTCATGCTACACTCTCATGCTACATTCTCATGCTGCACTCTCATGCTACATTCTCATGCTACAC-TCTCATGCTACATTCTCATGCTACACTAATTATCGCATAATTCCCTTTCATGTTACATAGTCGGGTAAAGAACCATTATTGGGATTTTAACCCGCTCATTCTTCAGCCTTTCAGTTGCATTTCTGCCCCCTAGTGGCCACTGAGGTATCGCACCCTAATAAGATGGGCTTTGCTCTTGATGAGTAATAATAGATGAgtctgtctgtctgtctgcctgtctgtctgtctgtctgtct 

a score=3963
s mm6.chr8_random   3479790 480 +  24571640 AATAATGAAGGGCATGGTCTCTTGAGAGT----AAAGACACAATGTAGTAATGGAGGACATGGTCCCTCAGAGTAGAGACACAACATAATAATGAAGGACATGGTCCCTCAGAGCAGAAATATAGCATAATAATGAAGGACATTGTTCCCTCATAGTAGAGATATAATGTAATAATGAAGGACATGGTCCCTCAGAGTAGAGATATAGCATAATAATGAAGGACAT-----------------------------------------GGTCCCTCAGAGTAAAGATACAGTGTAATAATGGAAGACATGGTCCCCTAGAGTAGAGACACAATGCAATAATGAAGAACATTGTTCCCTCAGAGTTGAGATACAATG---TAACAATGAAGGACATGGTCCAGCAGAGTAGAGATACCATATAATAATGAAGGACATTGTTCCCTTTAGAGTACAGATACA---GTTTAATAATGGAAGACATTCTCCCTTCTAGTCTTCCAGGTAGAGTGAGGTTTAGGGAGGGAATTGATG 
s fr1.chrUn       298675732 482 + 349519338 AGTGGTGAGGGACATGG------GACAGTGGTGAGGGACATGGGACAGTGGTGAGGGACAGGGGCCCAGTGGTGAGGGACAGGGGACAGTGGTGAGGGACAGGGGCCCAGTGGTGAGGGACATGGGACAGTGGTGAGGGACATGGGAC----------------------AGTGGTGAGGGACAGGGGCCCAGTGGTGAGGGACATGGGACAGTGGTGAGGGACATGGGACAGTGGTGAGGGACAGGGGCCCAGTAGTGAGGGACAGGGGCCCAGTGGTGAGGGACATGGGACAGTGGTGAGGGACAGGGGCCCAGTGGTGAGGGACATGGGACAGTAgtgagggacat------------ggtgagggacatggGCCCAGTGGTGAGGGACATGGGACAGTGGTG-AGGGACATGGGACAGTGGTGAGGGACAGGGGCCC----AGTGGTGAGGGACATGGGCCCAGTAGTGAGGGACAGGGGCCC----AGTGGTGAGGGACAGGGGACCAGTAgtgagggacatggtg 

a score=3529
s mm6.chr8_random  3691341 676 +  24571640 CTCACCATCTCATGGGATTATAAATGTGTCCACTCTGGCTCACTATCTCCTGGAATTACAAATGTGTCCACACTTGTTCATAAACCTTTAGGATTAATAATATGTCCACTCTGGCTCACCATCCTTTGGGCTTATTCATATATCCCCCATGGATCACCATCTCCTGGGATTACAAATGTGTACAGTCTGCCTTCCCATCTCCTGTTATTACAAATTTGTCCTCTATGGCTCACCATCCCCTGGGATTACAAATGTGTCCACTCTGCCACACCATCTCCTGGAATTACAAATGTTTCCACTCTGGCTCATTATCTCCTGGAATTACAAATATGTCCTCTCTGGCTCACCATCCTTTGGGATTTCTAATATGTTCACCTAGGT----TCACCATCTCCTGGAATTACAAATGTGTCCATTCTGGCTCAACATCTCCTGGAATTACAAATATGTCTACTCTTGATCACCATCCTTTGGGATTACAAATGTGTCCATTCTGGCTCACCATCCTTTGGGATTACTAATATATCTACCTTGGCTCACCATATCCTGAGATTACAAATGTGTCCACTCTGGCTCACC------ATCTCCTTGAATTACAAATTTGTCCCCTATGG----CTCACCATCACCTAGGATTACAAAGTGTCCAATCTGGCTCACCATTTCCCGAGATTACAAATGTGTCC 
s fr1.chrUn       27898153 579 - 349519338 CTCATCACCTCATGTGTTCATAAAGGTGAC--------CTCATCACCTCATGTCTTCATAAAGGTGAC--------TTCATCACCTCATGTGTTCATAAAGGTGAC--------CTCATCACCTCATGTGTTCATAAAGGTGACCTC-----ATCACCA-CTCATGTGTTCATAAAGGTG--------ACCTCATCACCTCATGTGTTCATAAAGGTGACCTC-----ATCACCA-CTCATGTCTTCATAAAGGTGACCTCATCACCA------CTCATGTGTTCATAAAGGTGAC--------CTCATCACCTCATGTGTTCATAAAGGTGACCTC-----ATCACCA-------------CTCATGTGTTCATAAAGGTGACCTCATCACCTCATGTCTTCATAAAGGTGAC--------CTCATCACCTCATGTGTTCATAAAGGTGACC--------TCATCACCTCATGTCTTCATAAAGGTGAC--------CTCATCACCTCATGTGTTCATAAAGGTG---ACCTCA--TCACCAC-TCATGTGTTCATAAAGGTGACCTCATGTGTTCATAAAGGTGACCTCATC--ACCACTCATGTGTTCATAAAGGTGACCTCATCACCACTCATGTGTTCATAAAGGTGACCTCA--TCACCA-CTCATGTGTTCATAAAGGTGACC 

a score=5978
s mm6.chr8_random   5080676 399 +  24571640 TCAGTAGAAGCGTTTCCGGCTCTGGTCTTGCCATTTGTTGTAGAGTATGATCCCGATGACAATGGCAAATACAGAAAACACCAAGGAGAAAAAGACAATAAGGAAGAGAGCCAGGCCACTCA-------------------------------------------------------------GGGGC-----GTTGGTGGTAATGTCATCTCT-GGCAGCTTCAGATTATCCACCGAGGGCAGGAATACATCTTGATGTAGCTTTTCTTCTTC---TGGGGTCCTCACTCCAGTCAGCTCAAACAACTTGAGGGAAATGACATCATGGTTAGC-----------------------------------------------------------------------------AGAGAGATCCCCAGTGATGGAGGAAGTGCAGAAGTAATAGCCCTGGGGGAGCCGGATCCCGGGCATCTCAATGCAGTCCCTCCACTCATGTTTGCCATCAATATCCATCATTAT-----CATCAGATGCCTCTTGACATA 
s fr1.chrUn       202831152 551 - 349519338 TCAATAGAAGCGCTTGCGTCTGCTCTCTTTCCACTGGTTGTAGCCCACCAGACCGATGATGATGAGGAAGATGCAGCCCAGCATGGAGAAGAGCACAGTGAAGAAAATGGCCACGGTGCTCATCCCCTCTTCAGCTGGAACCACTGAACACAACATATGACGTTAGAAGAGTAACACGGTGAAGAGGCTGAAGGTGTGCGTTTGTCTTACGTCTCAGCAGTTCAAAGTTGTCCACACTGGGTATTGTTATctcctcctcctcctcttcctcttcctTTTCGCTCCGGATCACCGTCAGTTCGTAGAGTTTCAGGGAAATTATATCGTGGTTATCTATCGACAGAACCGAGGACGGACCTTCAGAAAAACCACGTGCCGACGCAGTTTAAGACACTGAAGCGTATATTTACCCGAAAGGTCTCCAGTCAAGGCTGTGGCACCAAAATAGTAGCCGCGGGGAAGCTGAACACCAGGTAAATCCAGGCAGTCCCTCCACTCGTGCTGTCCATCGATGTCTATCATCACCTGGGCAACAGAGGGGTCTTCACAGA 

a score=-427
s mm6.chr8_random   5201192 1080 +  24571640 AGCTCTTTGTGTCTGTGAGGAAAGACCAGAAGCTTCCATTTGTCATTTCACGTTTC------------ATCTACACAGAAAGTGAAAGGTGCGCTCTTCAGCTTTTGTCCTGAAGTTTGCCTTCACTGCTGTCTTTCATGCTGATTTTCCTATTTATTCTTCTTCTGGTGCTA-ATTACACTGATCAGAAT------TGGTCACAATATTT---AAGTACTTACATTTAGGAA-AGAATTTGATACATTGTTAGGTGATATAGAAGTTTACCAGAAACAGGAAAGCTTAGAGATTTGTCACAATTATGTCAT----TTCTAGCAACCATTAAAAATAAAACAGGAGAATAAGGAATTCAAGCTCATTGGTATTTTTTCCAAAGAACTCTTC----ATGGTTATAAATACAGTATCCTATTTTTGTTGCCATTTTAAATTCATCAAATCTACTTGAGAATTTGTAGCATGATTCCTT-CTTCAG-----CTTTTATTAGTATTCATTGCTTCCCCCTTTCCTTCCA----------TGATTTTACT------ACAGTAATGTTAAACATG----------------------GATTCTTTTATCTGATATTGTCATGTCCTGCTGAAATAGAGGCAAGAGTCACGGTGGACATT----AGTGCTCACTGACACCCGGATG------GGACTTT-------------AGTTTCT---TCTTCCTCTATTTGAGACAAGGTAGAAGAAGATATTTTACCTCTGTT-CATTCCGTATAGGAAGATGAATACTCAGAACAAGAAGAG----AAAGGAAGGGGGAATTTTATAGCTGCTGCTTGGCTCAGAAATGGAAGTAGGTAGACACCATGGACCcatgag-----cacctgagtatggtttccagcacacacataaaaa---------gctgggtgtggtggccgtgctggga--ggtgaggaca-ggcagatccctacagccagccatccatccagcccagcctaaccatgaactgcaggtatcagcgagagaccctgtattcaacaagcaaggcaggtagcttcagaaaaatgacattcaagattgacttctggccttcacatgcatatgcacataTGTGCACTTacacacacacacacacacacacacacacacacacacacacacaTGCTTACACATGTGCTTGTACATGCCACCACACAC 
s fr1.chrUn       332502468 1138 - 349519338 AGTTTTTTGTTCTTCTGAGCAAAGACCACATGCATAAATTTGGTAATTCTACTTTCAAAGGTTGTCATATTTAGAGAGATGGTGAAAATTTGAATCCTGAA--TTGAGTCCAAGGGTTATTTTCTCTGAGG--------------GTACAGAGCTATTAACTTCAGAGAGCCACGTCGCAATTGTCAGCAGAGTATATGAGTTCCATTTTTACAAAATACATGTTTTTGGCAACAGATTGTAAAACTCCAGTCAGTCTTATGGTTGT-------AAATTGGAATGACTTCAGTCGAATCACAAATCTGTGGTCGGATTGCAGGAACGCTTAATCTCCAAAAACAAACAT----CCTTCAAGA-----GGCTGTTTTCACGTGCAGCATTTCGAGTGTGCTTCTACTTAAAGCATTAAAGTGCTTTTTACTTTGTAGAACTATTCAGTAAAAGTGACGATTTG--GTCTGAGAGCTTACTTTAGCTATACTTTTATAAAAGGTTTGTACTTAACAGTATTATGACACCTTGAACATTGATTTTAATTGCTTCTCAGCACTGTTATCCCTGAGTCACCAGACAATATATTTCTGGTCCTGCTCCTTGATATTGCTATCTTCT-------TAAAAACCACAACCACAAAGGTCGTCTGTAAATGAAGAATGACGCCCTGTTGCTGCAAAGTCCTTGTCTGCTGGAATAAGTCTCTCTCTCTTTCTGTCTCCTGGACACTTTAGGA--------TGTGCCTTTCTTACATACTGTGCCAGAGAGTCAGCACTGAAGGCCCAGAGCGCCCTCCATGAACAGAAGACTCTGCCAGGGGTAAGTGCCTCCGATACACCCGCTGCCACAGGCTAACGGCCCCGGGGTCGGCCAGCCTGGCATGGGAACCCACATTGACATAGGAATTACATCACACTTGCTCTCACACACATGCTGAGGCTCATGAGGACACAGCGCAACATTAGAACACG------AACACGCCCAGATGGA-----AACAGATGGAGGGAGTCACTCGCTCTGTTTTAAACCAGC----CTTTTAGCCTCTTCTTGATCACGCTTGTG-CCGATTTTGTCCTCCTACACGCACAGTCACGCGTGcacacacacacacacacacacacacacacacacacacactcacacacacacacacacacacacacacacacacacacacacacac 

a score=5448
s mm6.chr8_random   9888205 134 +  24571640 ACATACTGGATTTATACTCACCTATCTGGATTTATTAGAGATCGAATCGTAATGGCAGCCTTTAAACGTTGCTTGACATCGAGGTAACTAGAAGGTTCATCAAACATAAAACTAAGGAAAAAAAAAAGCAAGTC 
s fr1.chrUn       266871485 134 + 349519338 ACTTTCTGAACACGGCCTCACCTGTCCGGGGTGATGAGGGAGCGGATGGTGATGGCGGCCTTCAGCCTCTGCTTTACATCCAGATAACTGGACGGTTCATCGAACATAAAACTGCAGGAGAGAGGACGGCTGTC 

a score=1636
s mm6.chr8_random  10446792 64 +  24571640 AATTCTTAAACACAGGAAACAAGGGGATAAAATCACAAGAATATGAAGAGACAAAATCATTGAA 
s fr1.chrUn       253100543 64 - 349519338 AATTCTGGATTACTGCACACAAGCAGACAAACCCAAAAAAAAAATGTCTAACATAATCATTAAA 

a score=-84
s mm6.chr8_random  10448046 119 +  24571640 AGTCTGATAAAAATAGTT-----TATGGGAGGCAGTACATTGAACTCCACAGAGACAACACCGTGGCAAGCGAGAGCCAGATAGGCACTGGGCGACTCTGTGCTGCA----------CGGAGGAAA---ATCAACTA 
s fr1.chrUn       253103718 128 - 349519338 AGACTGATAAGATTCGCTACGATCAGGAAATGCAGTCCTACGTTCCTCCCAAAGGCAGCAAAGTCAGCAGGAAGAAGAAGAAGGAC---------CCCAATGCTCCAAAAAGGCCACCGTAAGAAACAGATTTATAG 

a score=3575
s mm6.chr8_random  10448165 64 +  24571640 AACATGGGCAAAGGAGATCCTAAGAAGCTGAGAGACAAAATGTCTTCATATGCATTCTTTGTGC 
s fr1.chrUn       292727630 61 - 349519338 AAGATGGGTAAGG---ATCCAAAGAAGCCCAGAGGCAAAATGTCCTCATATGCCTACTTTGTGC 

a score=7075
s mm6.chr8_random  10448264 301 +  24571640 CAAGAAAAAGGCCGAGCATCCTGGCCTATCCATTGGTGAACTTTGCAAAGAACCTAGGAGAAATGTGGAACAACACTGCAGCTGATGACAAGC-----TATGAGAAGAAGGCTGCCAAGCTGAAGGAGAAGTACTAGAAGG--ATACTGCTGCCTACAGA--------------------------------GCTAAAGGAAAATCCG---ATCAGCGGGTGGTCAAGACTAAAAAGGGCaagaaaaaaaaaaggaa----------------aagaaagatgaggaggaagatgaagaggatgaggaagaagaggaagaagaggaagaCggagatgaaaaacaagatacaaa----ttggaa 
s fr1.chrUn       292728139 362 - 349519338 CAAGGTGAAGAGCGAGAATCCCGGACTCACGATTGGCGA-CACGGCCAAGAAACTGGGCGAGATGTGGAACAGCAAAACTGCAGAGGAAAAGCAGCCATACGAGAAGAAGGCCGCCAAGCTGAAGGAGAAGTACGACAAGGTAATAACACGCCGTCCAAACGCCAGAAAAAATAATCCTTTTTTTTATTTGCACCAAAAAAACACCCATCTGTCATCCTCAGGACATCGTTGCGTACCGCACGAAGGGCAAAGTGGACTCTGAATCAGCTGCCACGGCAgacgacgatgaggaggaagacgatgaagaggaggaggaagacgatgacgacgaggatgatgaGTAAACTGTAAAGGAGTTGGAA 

a score=6170
s mm6.chr8_random  10460076 119 +  24571640 GATGGTCTTACCATAGTCGTCTCTGCAATGGAGCCAAAGCTGTTTATGAATATGTTGCATGTGACATTAACTGGAGGACCTGAAAAAAAAAGAAGTATATCATAAAGGCTG------ATAGATGC 
s fr1.chrUn       203011749 125 + 349519338 GAGAATCTCACCATGGTTGTTTCTGTGATGGAGCCAAAGCTGTTGATGAAGATGTTACAGGTGACGTTAACAGGAGGACCTGGGAGAAGCAGACGGCCATCAGTCAGGCTGCTTTTCATAGATAC 

a score=6130
s mm6.chr8_random  10529004 130 +  24571640 TCTTACTTACAGCTTTCAAGTTGCATTATGCATGTTTGTACATCCATTGGGAAATTCTTGAGATCCATTGGACAGGAGAGTGTTAATGTCAACCTGAAAG-GATGAAAGGAATTCTTTTAAAGGTGATTTA 
s fr1.chrUn       253147968 131 - 349519338 TTTTACTTACAGCTCTCCAACTGCATAATACAAGTCTGAACATCCATGGGGAAGTTTTTTAGGTCCATTGGACAGGACAGCGTTAAGGTTAACCTGAAAGCGAAGACAGTGAGACTAATGACGGATGTTCA 

a score=12684
s mm6.chr8_random  10551709 207 +  24571640 TTAAATCTATGCTTACCTTATTGAATAAAGGACATTTCCATTTTTGAAAATTCTTAGCAGCTTGTTATCTGTGGTGACTTGGTGGAAGTTAGCCCCCTTCTCATTAGCAAAGAACAAGTCAGGTTTCCAAATGGAATCCAACATAGACGGGTCAAGGTCTAATGAATCGTCAGGATATTCACGGTAGGCAAGACGAGGATCATTCCA 
s fr1.chrUn       253148125 207 - 349519338 TTACTTTCACACTTACCTGATAGAGTACAGCACATTTCCGTTCTTAAATATCCTGAGCAGCTTGTTGTCTGTGGTGACCTCGTGAAAATGAGCCCCTTTCTCATTAGCAAAGAACAAATCGGGTTTCCAAATGGAGTCCAGCATGGACGGGTCCAGGTCCAAAGAGTCATCTGGGTACTCAGAGTAGGCGAGCCTGGGATCGTTCCA 

a score=2981
s mm6.chr8_random  11251757 210 +  24571640 TTAACATGTATGTTTATTTGCATATTCCTGGTCTCTGTTTTTCT---TGTGA-TCTTTTCATTTTTTTCCCTTTGAAACTTTAAAGATACTGAAAAGTACAGTGTTTTTGTTTCTTTTCTAACAGATAAAAATAGATGTTTAAAAGCAAATGCCAAATCTTGCGGAGAATGTATACAAGCAGGGCCAAATTGTGGGTGGTGTACAAATACGGTA 
s fr1.chrUn       154445245 177 - 349519338 TTAACATGCTGCTTACTTTGCAGGGCCTTTGCTGCAGACTTGCTCCCTCTAACTCCTCTAACTTTTTCCCCCTT----------------------------TGTTTTCAATTC---------AGAGGGGAACGAGTGCATCATTGCCAGTGCCAAACACTGTGGGGAGTGCATCCAGGCTGGGGCTAAATGTGGCTGGTGTAAAGACCCGGTA 

a score=395
s mm6.chr8_random  11254344 379 +  24571640 aataagatacaaTTTAAGAAAAACAATAAAAATATCTCATTTAGTAGCAAGCATTTAAAAGATT------TAGTAGCAAGCATTTAAAAGATTTT-Tagctcgtcagtgatggcacatgcatttaatctcagcactggaaagacagaaacaggcagatg--tctgagtttgaggatagcctggtctatatagagtttcagg-----actacacatagaaaccttgtctca---aaaaaGTTTTTATTCAGGAAAGTTTATGCTATGCTTTacacacacacacacacacacacacacTATTAATTGGGATGTATTTAGGCTAATGTGGTTTTCTTAAACGCCTAGTTGTTTAAAATGCTTTGCTGGGAAG---------TCCTTCAAAGGACTTTTCTAAGAGAAA 
s fr1.chrUn       130373185 376 + 349519338 aatataatataatataatataatataatataatataataCTTGCTGT---ATGTTTACTGGATTCTGGATTGGTAATAAGGATATGGAAGCTGTTATTGCTAATCATGCTTATTTCAGGCTGTTAA------------ACAGATAAAAGGATTTAAATTCTTGTGAACTGGATGATAATCTTA---AACTACATCTTCAGGTAGATGCAGCAAAAAAAATCTTTGTGTTATCTGAAAA------ATACACAAAAGCTAA----ATAAATCTCAAATAAACTGATA-ACTGAAGATTTCTTAATTGACCTATATTTATGCAGTACTGATTTTCATAAAATCCATTTTATTTTATTTCTATTGCTTTGTAGCCCTATTATCCCTTAAAATGGCTTTTCTTGTGGAAA 

a score=4009
s mm6.chr8_random  11255055 227 +  24571640 AGACATTTTTGCAAGAAGGAATGCCTACTTCTGCACGATGTGATGATTTAGAAGCTTTGAAAAAGAAGGGTTGCCAGCCAAGTGACATAGAGAATCCCAGAGGCTCTCAAACTATAAAGAAAAATAAAAATGTCACCAATCGCAGCAAAGGGATGGCAGAGAAGCTCCGGCCAGAAGACATTACTCAGATCCAACCACAACAGCTGCTTCTAAAATTGAGATCAGGT 
s fr1.chrUn       154445505 224 - 349519338 AGGCGTTCCTGAAGCAGGGTGAGGCGGTGTCGACCCGCTGTGATGAGCTGCAGTCTCTGGTAAAAAGAGGCTGTAATGTGGACATGATTGAAAGCCCAAAAGGGGAGAAGAAGATCCTGAGAAACAAACCGGTAACAAACCGCAAAAAAGG---AGGAGAAAAACTGCAGCCACATGAAATCACCCAAATCCAGCCACAGAAGCTCAACCTCACCCTTCGATCGGGT 

a score=9721
s mm6.chr8_random  11257964 230 +  24571640 ATTTTGATTACTGGCCA----TCTAATTTCAGTTTTGAATCTTGTTAA---------TTAGGAGAACCACAGAAGTTTACATTAAAATTCAAGAGGGCTGAAGATTACCCTATTGATCTCTACTACCTTATGGATCTCTCCTACTCTATGAAAGATGATCTGGAGAATGTGAAAAGTCTTGGAACGGATTTGATGAATGAAATGAGGAGGATTACTTCAGACTTCCGCATTGGTAGGAATGTT 
s fr1.chrUn       154445768 240 - 349519338 ACTGTGATCACTCGCCAATGATCGTATGCTACTTCT---TCCTGTTGAACAATAACTTTAGGGGAGCCCCAGACCTTTGACTTGAAGTTCAAACGAGCAGAAGATTACCCGATTGACCTGTACTACCTGATGGACCTGTCATACTCAATGAAGGATGATCTGGAGAATGTGAAGAACCTGGGAACAAGTCTGATGCAGAAGATGTCAAAGATCACTTCTGACTTCCAGATAGGTGAGGACGTT 

a score=11899
s mm6.chr8_random  11258556 496 +  24571640 tgactgagctcagtctccaaaatcagttcctgcttg--------tcctttgacctccagacatgcat------tgtggtatatgtgtgcacaTCCTTCACCCAAATAAATAAGTAAATATCAATTTAAAAGTGATGTAAGTTTGTTGGTCTCTTCCCACTCATCTATCCAAGTACATTCTTTTCTTTAGGCTTTGGCTCATTTGTGGAGAAAACTGTGATGCCGTATATTAGCACAACCCCAGCAAAGCTAAGAAATCCTTGTACAAGTGAACAAAACTGCACCAGCCCATTTAGCTACAAAAATGTGCTTAGTCTTACTGACAGAGGAGAGTTTTTCAATGAACTTGTTGGTCAGCAACGCATATCTGGAAACTTGGATTCTCCAGAAGGTGGCTTTGATGCAATCATGCAGGTTGCGGTTTGTGGAGTAAGTGATTTATTTCTACAGGGGACTGTTAGCATTGTCTGTGGGGATTTATTTTAAGTGTTTTTAATAAAAGTTAGAACAA 
s fr1.chrUn       154446148 479 - 349519338 TGACCAAGTTTTTATTTTAAATACCATCCATGTTTGAAGGCCCTTCTTGTGACCTGGAGAGACACATAAAATATGAAACAGTTCAGAGGTCAACCTTT-TCTAAATG--TTAGGAAAGATCAATCCAACAGTCAGCTAAA---GTGAATTTCT----------------AAGTCCGCCTGTCTTGAAAGGTTTTGGCTCGTTTGTGGAAAAGACAGTGATGCCATACATCAGCACTACCCCGGCCAAGCTGCTGAACCCGTGCACAGGCGACCAGAACTGCACCAGTCCATTCAGCTACAGAAACGTCCTCAACCTGACCAGCGATGGCAAGCAGTTCAACACCCTGGTGGGCCAACAGCAAATCTCTGGAAATCTAGACTCTCCCGAGGGGGGGTTTGATGCCATCATGCAAGTGGCTGTGTGTGGGGTAAGCAACACACTAC----GGTAAAAGTCAGAATCACCCTTCAAT-----TTTCCAGCACGATAAATATTAGTTAAGATAA 

a score=11222
s mm6.chr8_random  11260916 191 +  24571640 TCTTTTAAAGTCGCTGATTGGCTGGAGGAATGTAACACGACTGCTGGTGTTTTCCACGGATGCTGGGTTTCACTTTGCTGGAGATGGGAAACTTGGTGGTATTGTTTTACCCAATGATGGACAATGTCACCTGGAAAATAATGTATATACAATGAGCCATTACTATGTAAGTA-CTTAGGCCTGCCTAGTGA 
s fr1.chrUn       154446991 190 - 349519338 TCTTTTAGAACC--TGATCGGTTGGAGGGATGTGACCCGTCTGCTGGTTTTCTCCACTGATGCTGGGTTCCACTTTGCCGGTGATGGCAAACTAGGTGGCATTGTCCTGCCCAATGATGGGAAATGTCACTTGGAGGATAACGTCTACACAATGAGCCACTATTATGTAAGTAGCTCGGGGCTGTTTTGTTA 

a score=8325
s mm6.chr8_random  11261988 499 +  24571640 AATTGTATTACTTTATTCCTTAGGATTATCCTTCAATTGCTCACCTTGTTCAGAAACTAAGTGAAAATAATATTCAGACGATTTTTGCAGTTACTGAAGAGTTCCAACCTGTTTACAAGGTAA----TACAAAGAATGAAAGTTCTATATTTTTCCTATTGT---TTAGTCATTA-----GTAGCTGAATTATATTTTTGGAATGTAAGAAAA--------------------TGCCACAAGGCAT--------------------TATGTTCAGT----------------------------------------------------AGCTAGACTGAATTTGACAACCGTCATTTATGTTCATTTTAGTTGT---GTATTATTAGGATTGTTA---TTTTAAGTTTGCCTTTGAAAGATACTTAGGAAATGAGGTGTCAAAATACTACTTTTCAGTGGATTTTAATTGGTTGAAAAAGTAATATTTATGTTTTACATATTTAATTTCAGGAATTGAAGAATTTGATTCCTAAGTCAGCAGTGGGCACACTGTCTGGAAACTCTAGTAATGTGATCCAGCTAATCATCGATGCCTACAACGTGAGTGC 
s fr1.chrUn       154447215 590 - 349519338 AGTTGCCCTTCTCCTTTTCAAAGGACTATCCCTCCATTGCTCACCTGGTTCAAAAACTGAGTGACAACAACATCCAGACCATCTTTGCAGTGACGGAGGAGTTTCAGCCTGTTTATCAGGTGAGTGCTGCTACTATCTGATACTATACATTCCTTCTTTTCTTCCTCATTCACTGTTAATGTGGGTGTTCTAAGGATTTGCCATGTGTGAAAACATGCGCTTGGGCCAACATGTGCTGCGAGTTATGGTCGCATCCTCTCTTATACTATAATTACTTCCCTCTGTGACGTTGTTGCTCTTCAGGCCATTTGTAACCCTCCTTCATCTGAGTTTAATTAACTTTAACTACCGGTATGTGAGCTCAATCTCATTTTAACGTGGAATGAAG-TTGTTAAAGTCTGTGGTTATTCTTAAAAAGGCATTCATCTGATGCCCAACAGAAATGCTGTTTC--------TGTCATTGGGTCAGCAGAACTTTATTTTTTCTCT----------CTTCAGGAGCTGAAAAATCTCATACCAAAGTCTGCAGTAGGGACTCTGTCTGCCAACTCAAGCAATGTAATCAACCTTATTATAGATGCTTACAATGTAAGTAC 

a score=7605
s mm6.chr8_random  11264789 150 +  24571640 TTTTTAGTCTCTTTCTTCAGAAGTCATTCTGGAAAATAGCAAATTGCCAGACGGAGTAACAATAAATTACAAATCCTATTGCAAGAATGGGGTGAATGGGACAGGAGAAAATGGACGAAAGTGTTCCAACATTTCTATTGGAGATGAGGT 
s fr1.chrUn       154447995 150 - 349519338 TTTGCAGTCGCTTTCATCTGAAGTTATTCTGGAGAACAGCAAGCTTCCCTCAGGTGTGACCATAACATACACATCCCGCTGTAAGAATGGAGTGGTCAACGGAGGCGAAAATGGACGAAAATGCTCCAACATCTCCATTGGAGATGAAGT 

a score=-1426
s mm6.chr8_random  11264939 110 +  24571640 AT------------GTTGTATGACCGTTTTCTGTGAAAAAGAAAAACATGCATAAAAATGTggggctggagagatggcttagcagttaa-----agcactagcATTTGAAATATTTTCATGTTCATT 
s fr1.chrUn       216449537 118 - 349519338 GCTCTTTGGTTTTGGGTTTTGGGCTCTTTTCTGAATGGTTTTGGTAGATTCTCACTAAT---------GAGAAACAGCTTGTGAGCTAATGATCAACAGGAAACTTTGGGGCCTTTTCCTTAACGGT 

a score=7616
s mm6.chr8_random  11265049 236 +  24571640 GCTAAATTTATTAATCTTTTTTCCTTTAAGGTTCAATTTGAAATTAGCATAACTGCTAATAAATGTCCAAATAAGGA---GTCTGAAACCATTAAAATTAAACCTCTGGGCTTCACTGAAGAAGTAGAGGTCGTTCTTCAGTTCATCTGTAAGTGCAATTGTCAAAGCCATGGCATCCCAGCCAGTCCCAAGTGCCATGAGGGAAATGGGACATTTGAGTGTGGAGCCTGCAGGTAAGT 
s fr1.chrUn       154448608 235 - 349519338 GCTACATTTGCTC-TTTTCTGTTTTTTAAGGTTACCTTTAGCATCAGTGTGACATCAAAGGGCTGCCCTAATGAAGGAATGTCTGACACCATTAAGATTAAGCCCCTGGGATTTACTGAAGAGTTGGAGATCACGCTCAACTTTATCTGCGGCTGCGACTGCCAGAAGGTCGGCATCAACAAGAGTCCCCTCTGCCAC---AGTAACGGCACCTATGAGTGTGGAGACTGCAGGTAAGT 

a score=14246
s mm6.chr8_random  11267177 740 +  24571640 TCTTTCTGCAGGTGCAATGAGGGGCGTGTTGGGAGGCACTGTGAATGTAGCACAGATGAAGTGAACAGTGAAGACATGGACGCTTACTGCAGGAAAGAGAACAGTTCGGAAATCTGCAGTAACAATGGAGAATGTGTCTGTGGACAGTGTGTGTGTAGGAAGAGAGATAATACAAATGAAATTTACTCTGGAAAATTCTGCGAGTGTGATAACTTCAACTGTGATAGGTCTAATGGCTTAATTTGTGGAGGTGGGTAAGCACCAGCAGTAGCTACACACATAGTTCCTCTAATGAGATCAGATATCTGAGAGTCTCTGGGTTAACACACAGAAGGGGAGGGGCTTTCTTCTATGTTGTGGCTTGTTTTTAATTTGTGAATAATTGCTGTGATTATACATTTTACCATTGTTTTGAGAAATGATCTTTTTCGTTGCAGGCAATGGCGTGTGCAGGTGTCGTGTTTGTGAATGCTATCCCAATTACACTGGCAGTGCATGTGACTGTTCTTTGGACACTGGTCCATGTCTAGCGTCAAATGGTCAGATCTGCAATGGCCGGGGTATTTGTGAATGTGGTGCTTGTAAGTGCACAGATCCCAAGTTTCAAGGGCCAACTTGTGAGACATGTCAGACCTGCCTTGGCGTCTGTGCAGAGCATAAGTAAGTACTGCCAAAGTGTTTCAC-------------------------ATAGTCACATTCACTTTACTG---------ACCCTACACCACTAGAGCCAGAGGAGAGTGCTGAT 
s fr1.chrUn       154448901 667 - 349519338 TCTTTCT-CAGGTGTGAGGATGGACACGTGGGGAGAGAGTGCGAATGCAGCAGCAATGACGTCGCCACGGAAGATATGGACCGAACGTGCCGTAAAGACAACACGACTGACATTTGCAGCAACAGCGGTGACTGTGTATGTGGCACATGTGAATGCAAGAACAGGGACAACCCCGAGGAGAGATACAGCGGCCAGTTCTGCGAGTGTGACAACTTCAGCTGTGATCGCTCCGGCAACAAACTGTGTGGAGGTGAAT-----------GTAG----------------------------------------GCCCCTGGGCAGATGCAGAAGCATAAATGGACTCT-----------------------------TGAACAACTAGAAAGCTTTTA-------------------------ATCTTTTTTTTTCAGGGCACGGACGC-TGTGAATGCAGAGTTTGTGTCTGTGATCTGATGTGGGCTGGAAGCGCCTGTGATTGCTCACTGGATAACACCACATGTATGGCCAGCAACAAGCAGATTTGCAATGGCAGGGGCACGTGTGACTGTGGCATCTGCAAGTGCACTGACCCCAAATTCCAGGGTCCCACCTGTGAGATCTGCCCTACCTGTCCAGGAGTGTGTACTGAACACAAGTAAGCAGTGTGGATGTGATGCCCTCATTCCCATATTCGGCTAATTCTAATGGTTATTTTAACCTAAATGAAATTAAAAACTTTAAATCAGAATGCCCAAAGGATCGTGTTGAT 

a score=5859
s mm6.chr8_random  11268366 381 +  24571640 TTTTAATATATGTCCCCCACGTCTGCAATGTGCTA-CTTGTTGGTCTTAGACATACCTGTTAGAGGTTTGTCATGGA-------CATGCTGGTGTCTTTACAAAAAGGATTCACAGTGTAGGCCTAA-TTGGCATCTGTGTAGCAACCATAGCTGTGCTCTGGATGCCAGGGTCTGTACTGGATGCTGAGCAGGTCCCCATAGCTGACTA------GGAAGTAAGGTTTGTGAATCCGATGTTGGGTGAACTCTTCTTGATAAGGCTTGGTGTTACTAGGCCCCATAGTCACTGGCCTTTAC---TGAAGCTCCTT-ATTCCTCCAGTGGAGGGCACATGCTTCA-GGCAGCTTCTGTAGCCAGAGGCTTCCTGGGTGCTTTGCTACTGCCAGTGGACTTA 
s fr1.chrUn       257748856 387 + 349519338 TTTTAAGCTCTCTCCCC-ACGGATGCGGCGGGCCAGCTGGATATCTTTAGGCATGATGGTGACTCTCTTGGCGTGGATAGCGCACAGGTTTGTATCTTCGAACAAC---CCGACGAGGTAAGCCTCACTTGACTCCTGGAGAGCCATCACAGCCGAACTCTGGAAGCGGAGGTCTGTTTTGAAATCTTGGGCGATCTCC----CTGACCAGACGCTGGAAGGGCAGCTTGCGGATCAGCAGTTCGGTGGAC---TTCTGGTAACGACGGATTTCCCTGAGCGCTACTGTTCCAGGCCTGTAACGGTGAGGCTTCTTCACACCGCCGGTGGCGGGAGCGCTCTTCCTGGCTGCCTTAGTGGCCAGCTGCTTCCTCGGAGCCTTT---CCTCCTGTGGATTTA 

a score=7138
s mm6.chr8_random  11268952 397 +  24571640 AGCAAAGTTAATCTTAATACACGCTAAGTGTAACAATTTCTGTCTT--AGAGAATGTGTTCAGTGCAGAGCCTTCAATAAAGGAGAAAAGAAAGACACGTGTGCACAGGAGTGCTCCCACTTCAATCTCACCAAAGTAGAAAGCAGGGAGAAGTTGCCCCAGCCGGTGCAGGTCG---ATCCTGTGACCCATTGCAAGGAGAAGGACATTGATGACTGCTGGTTCTATTTCACCTATTCAGTGAATGGCAACAATGAAGCTATCGTGCATGTTGTGGAGACTCCAGGTAGA-----AGTCAGAGGATGCCTAGCATTGTTTCTTATGATGCCTTGCTTTTATTCTGAG---TCATTGCTGGGGTTCTGGTG--------GCAGAAACAGCCTGTATTCTTATCTTACTATTTATATTA 
s fr1.chrUn       154449568 401 - 349519338 ACCAGAATGAACCTCACT---------GTTTACATGCCCCCGTCCTTCAGAGAGTGTGTCCAGTGCCGGACGTTCGGCACCGGTGAGAAGAAGGACACATGCGAGAAAGACTGCAGTTACTTCACTCTGATCAAAGTGAAGGACCGGGACAAGCTACCGCAACCCAACGACGCTGCGTACCCCGTGATGCACTGCAAGGAGAGGGACGCCAACGACTGCTGGTTCTACTACACCTACGCCGTCAACAACAACACAGTGAAGGAGGTCCATGTGGTCGACAGTCTGGGTAAGGACACAAACTGGGTTTGCATGGACCTGGGTGT--GGAGGGTTTTCTGTTGCATTGGAACCTAATTACAGGGGCTGTGGTGGCTACACTGCAAAAATAGA--GCATTTGTGTTTT----TACATACTG 

a score=11069
s mm6.chr8_random  11270727 346 +  24571640 TATTAATTTTGTAAGATCCCATCCAACTCTTTGTGGTCATGTGAACTTTGTATATACTCAGTCTTTTTATGCTCACGATTAACCTTTTCATTTGTAGACTGTCCTACTGGTCCCGACATCATCCCAATTGTAGCAGGCGTGGTTGCTGGAATTGTTCTTATTGGCCTTGCCTTGCTGCTGATTTGGAAACTTTTAATGATAATTCATGACAGAAGGGAATTTGCTAAATTTGAAAAGGAGAAAATGAATGCCAAGTGGGACACGGTAAGTTATGAAACAT-TACTGAGAGCAGTAGGATGGTTCCTGAAGTAAATGTAACTTATTAATGGTGAGGCTGACCTTTAAA 
s fr1.chrUn       154449969 308 - 349519338 TATAAGCAGTGTGATATATCATCCCCATGGTAGTGTTATTGTGAGCTGCCTAAACACTCTA----------------------CTGCCTGGTTTTAGACTGTCCCGCTGGTCCTGATATTATCCCAATTGTGGCGGGCGTGGTTGCCGGCATCGTCCTGATCGGCTTAGCCTTGCTTCTTATCTGGAAACTGCTGATGATCATCCACGACAGACGAGAGTTTGCCAAATTTGAGAAGGAGAAGATGAACGCCAAATGGGATACAGTGAGTGCAGCCCCGTGCTCTGACACGAGCAGGAT--------AAGTGCTTTTGATTTCT---------GGCTGTCATTTAAA 

a score=6531
s mm6.chr8_random  11271733 219 +  24571640 ACATTCCAATTTTCTTTCTGATGAAATCACTAGAAACTAT--TTCTTTCACTTTAGCAAGAAAATCCGATTTACAAGAGTCCTATTAATAATTTCAAGAATCCAAACTATGGACGTAAAGCTGGT---CTCTGAGTTTCCGTTCGTATTTCTTTTCACTTTCTATCCTTGCATGTGAATTTCTGTCTCTCTTTTTTTTTACTGCACCATGTGTGTGTCTCAACA 
s fr1.chrUn       154451104 213 - 349519338 ACAATTCTGTTTTGTTGCCGCTTGAATTTCT-----CTGTCATTCTTTGCCTGTAGCAAGAAAATCCCATATACAAGAGTCCTATCAATCAGTTCCAGAACCCCAGTTATGGACGTAAAGCTGCTGTCCTTTAAGTTTGTATTTCTTTTCCTTTCCACTCTAGTTTCCTGCATG---AACTGTGTGTGTCTTGCTTTCTCCTAATTCTTGC---TTTCTCAAAA 

a score=4984
s mm6.chr8_random  11276812 80 +  24571640 TTGTGTTTTTTTTAGGGTGAAAATCCTATTTACAAGAGTGCCGTGACAACTGTGGTCAATCCGAAGTATGAGGGAAAATG 
s fr1.chrUn       154451566 80 - 349519338 TTTTCTCTTTTCCAGGGTGAAAATCCCATCTACAAAAGTGCTGTCACCACTGTGGTGAATCCCAAATATGAAGGAAAGTG 

a score=369
s mm6.chr8_random  11276892 151 +  24571640 AATCCTACTC------------------------------------AGGCGGATTTTGCAACACCAAGCTCACAGCAGCAGCATCTTAGTCACAGTAGGGTAGTTTTGGGGCTCTGTGGCCA----------GGGTTTTATTCAC-ATGCAGGTTTGGAAAATGTACAATATGtataatttt--taattttttattattt 
s fr1.chrUn       216458643 193 - 349519338 AGCTTCACTCTGACAACACTGTATGGAACCGTATGCGGGATAAACGGGGCGGGTTTTTTAATGCT---CTCACTGT----TTGTTGTAGCCACAAAACTTTAGCATTTTGCCACTATTTCCGTTTTACTAACTGTTTTTATTTGCTATGCATCTTCTGAAAGTGTACAGTCTGTATAGATGTGGGAGGTTTGTTTTATTT 

a score=5997
s mm6.chr8_random  11398966 434 +  24571640 CTGTGTTAAAATAGTAGC------------CCTTATTCTCCAGGCCCAGGGTCCACAGGCCCTGCGGGTCCTCATCCCAGTAGTGAGTGGACATGAAGATCCAGTTGTTGTAGCCTT-----------------GGC------------------------CGCTGATATCCAACG----GTCTGTGGCCAGTGGGTGGCACAGGAGAGACAGGGCTCGTGGCGTCTCACACAAGTCTTCTGAGTCCCACCCAGATAGGGTCCCATCTGGGAAGGCTAGGGAGGGCACCGCTGGCTCTCA--GGACCCTTTGAGATGTCTCACACCTGATGGCCACGAGCGTGGAGCGCGTGCCCATGGGGCTGGTGAGGAAGATCTCCAGGTCCCCGCGGCGGCTGTAGGAGAGCGAAAGCTGGACCTGCACGTGCTCGAGCGAGCGGATGAGGCGGCGGCGCGAGCCAT-CTGAGCACGCGGTCACGTTCT---TCGGCACCAGC 
s fr1.chrUn       166118327 477 + 349519338 CTGAGTTACCATAGTCACGGTCGCTAACTGCCGTGTTCTCTATTTCCAGGGTCCACTCGCCCTGAGGCTCCTCATCCCATGAGTGCGTGGTCATAAAAGTCCAGTTGTTGAATCCCTCTGAGGAGAAGTCATTGGGCCTGAAAGAAAAACATCAAGTGCTGCTTTGATTTACATCATTTCTTCTGGGGC---TGCATACAAAGGTAGAACCAAGCTCCATAAACTAGcacacacacacac--acacacacacacgcaGTGTGTCAGCAGAGGGGAC--GCGCAGACA-AACAGACTTTTATTGTGCTGTTTACTATGT-----ACCTGGGGAACAGCAGGGTGGAGCGTGTGCCCAGTGGGCTGATGAGATGAATGGCCAATTTCCCTCTCTGGCTGTGGGACAGACTGAGGCGAACCTGAACGTGTTCCAGACAGCTGACGA-------ACTCTGGTCGTCCCCAGCAGGCGTCCACGCTCTTGCTGAACACCAGC 

a score=6168
s mm6.chr8_random  11633501 180 +  24571640 TTAGGGGAAC---AGACATTTGCATTAAAATTCAAGAGAGATGAAGTCTATC--ATCGATCTTGACTTCCTCGTGGACCTCTTGTACTCAGGGAAAGATGATTTAGAGAATGTCAAGAGTCTTGTGACAACCATAATGAGATAGGGGGAAAAAATCACTCCAGACGTATAAAGCATCGAGGGCGT 
s fr1.chrUn       154445822 185 - 349519338 TTAGGGGAGCCCCAGACCTTTGACTTGAAGTTCAAACGAGCAGAAGATTACCCGATTGACCTGTACTACCTGATGGACCTGTCATACTCAATGAAGGATGATCTGGAGAATGTGAAGAACCTGGGAACAAGTCTGATGCAGAAGATGTCAAAGATCACTTCTGACTTCCAGATAGGTGAGGACGT 

a score=28770
s mm6.chr8_random 11640403 1003 +  24571640 CAGATTTGGCCTTATTGGGTGCCTGGTTACCAGGGCTTCCGTTTGCTCTCCACATGGCAAAGTGGAGATTGTTGCCATCAACAACCCCTTCATTGACCTCAACTACATGGT---------------------------------------------------------------------------------------CTACATGTTCCAGTATGACTCCACCCATGGAAAATTCCATGACACAGTCAAGGCTGAGAATGGGAAGCTTGTCATCAACAGGAAGCCCATCACCATCTTCCAGGAGCAAG---------------------------------------------------------------ATCCCACTAACATCAAATGGGGTGATGCTGGTGCTGAGTATGTCGTGGAGTTTACTGTTATCTTCACCACCATGGAGAAGGCC------------------------------------------------------------------------AGGGATCCACTTGAAGGGTGGAGCCAAAAGGGTAATCATCTCTGCCCCTTCTGCCGATGCCCCCATGTTTGTGATGGGTGGGAACCACGAGAAATATGACAACTCACTCAAGATTGTCAG----------------------------------------------------------------------------------------------CAATGCATCCTGCACCAACAACTGCTTAGCCCCCCGAGCCAAGGTCATCCATGACAACTTTGGCATCATGGAAAGGCTCATG--------------------------------------------------------------------------ACCACGATCCATTCCATCACTGCCACTCAGAAGATTGTTGATGGCCCCTCTGGAAAACTATGGCATGATGGCAGTGGGGCTGCCCAGAACATCATCCTTGCATTCACTGGTGCTGCCAAGGCTGTGGGCAAGGTCATCCCAGAGCTGAACAGG-------------------------------------------------------------------------------------------AAGCTTACTGGCATGGCCTTCCATGGTCCTACCCCACAATGTACTTGTTGTAGCTCTGACATGCTGCCTGGAGAAACCT---------------------------------------------------------------------------------TCCAAGTATGATGACATCAAGAAGGTGGTGAAGCAGGCATCTGAGGGGCCACTGAAGGGCATCCTGGGCTACACTGAGGACCAGG------------------------------------------------------------TTGTCTCCTGT----------GACTTCAACAGCAACTCCTACTCTTCCACCTTTGATGCTGGGGTTGGCATTGCTCTCAATGACAACTTTGTAAAGCTCATTTCCTGGTAT--------------------------------------------------------------------------------GACAATGA--------ACAGCAATAGGGTAGTGGACCACATGGCCTAGATGGCCTCCAAGGAGTAAGAAACCCTGGACCACCCACCC 
s fr1.chrUn       74844802 1715 + 349519338 CAGATTCGGCCGTATCGGCCGTCTGGTGACTCGTGCTGC--TTTCACCTCCAAG----AAGGTGGAAATTGTGGCCATCAATGACCCCTTCATTGACCTGGAGTACATGGTTGGTAACAAGACTTGACCCTTTGTCTGGAATCCGTCTTTCTTTACCCTGCCAACATGGTGAATTTGCATTATTTTAAATCTTTAGGTCTACATGTTCAAGTATGACTCCACCCACGGCCGCTTCAAGGGTGAGGTGAAGGCCGAGGGTGGCAAGCTGGTCGTCGATGGACATGCCATCACCGTTTTCCACGAGTGAGTTAACTTAACATGAGGCGTTTTAAACCCACCCACCCACTCTGTCCTGTCTGCTTTCAGGAGGGACCCCACTAACATTAAATGGGGTGAGGCTGGTGCCCAGTATGTGGTTGAGTCCACTGGTGTGTTCACCACCATCGAGAAGGCCTCCGTACGTATTCCGCTCCACACCCAAACTGCTCCTAGGTGCCATCCGCCGGTGTGTTAAAACGGTTTTCTCACAGGCTCACTTGAAGGGTGGTGCCAAGAGAGTGATCATCTCTGCACCCAGTGCTGATGCCCCCATGTTCGTCATGGGCGTCAACCATGAGAAGTACGACAAGTCCCTTTCCGTTGTCAGGTAAGGACCCGAGGGGGCGGCGAACCCACAATAATGGAACACTTCCTTCTAAACGCGCTCCTGGGTGACTAAAGCTGCCACTCTGGCTCCGTAGCAACGCTTCCTGCACAACCAACTGCCTGGCTCCCCTGGCCAAGGTCATCAACGACAACTTTGGAATCATTGAGGGCCTGATGGTGAGGATGGGACGGCCCCTGAAGATGATGCCAGCGGAGAACCCGTTTAACCAAACCTGTCCTCTCCCTCCCAGAGCACAGTTCACGCCATCACTGCCACTCAGAAGACGGTGGACGGTCCCTCAGGCAAGCTGTGGAGAGACGGCCGTGGTGCCAGCCAGAACATCATCCCCGCCTCTACCGGCGCCGCCAAGGCCGTCGGCAAGGTCATCCCCGAGCTGAACGGGTCCGTCGAAACATCCCCATGTTGCTGAATTTAAAAATATCAGCATAAATATATCGATTTGGTTTATTCCTGAAAACTTGTTTTTCCACAGCAAGCTGACCGGCATGGCCTTCCGTGTTCCCACCCC-CAACGTGTCCGTGGTTGACCTGACGGTCCGCCTGGAGAAGCCTGTGAGTGACGTCTCCAACGTTCTGACCCGCTGAGATTAAAACGATGACGTTGTCAAACTCTTCGAATTTCCTTTGCCGCAGGCCAAGTACGACGACATCAAGAAGGTTGTGAAGGCCGCAGCTGAGGGCCCAATGAAAGGCATTCTGGGATACACGGAGCACCAGGTATGTTTATTTGCTGACATCCTCTAGATTTAAGAGTCCAGTGTTTTATGGACCCGTCCGTTTGTCTCAGGTTGTGTCCACAGACTTCAACGGCGACACCCACTCCTCCATCTTTGATGCTGGTGCTGGCATCGCCCTCAACGACCACTTCGTCAAGCTGGTCACATGGTACGTGTTTGTTTTGGGTTTTTTTCCTCCGGTTTGTGTAACTGGTGTTCTAAATCAACTTTCTTTTTGTTCCCCACCAGGTACGACAATGAGTTTGGCTACAGCAACCGTGTCTGTGACCTGATGGCCCACATGGCTGCCAAGGAGTAAACGGGCC-ACATCACGCATCC 

a score=3195
s mm6.chr8_random  11989701 153 +  24571640 GCCCCCTTCATCTCTTGAGCAGTCTGGTCC--TGCATCTTCCTCATACTCTGTCAAGCAATCCGACTCCTCCCCTGGGATAGGAAGTATCAAGGTGCAGGTGAGAGACATGGGTCTGGGCTGGTATTTCCAGTCACACATGCCCCCCCATCTCCA 
s fr1.chrUn       259915967 132 + 349519338 GCTCCGTCCTCCTCTCTGACCGT---GTCCATCCCATCTTCCTCATACTCTGTCAGACAGTCTGACTCTTCTGCTGGA--AGGA------AAGATTTGGAGGAGATATTAGAGTGTG------------CAGTGACCCCCCCCCCCCCAGCNTCA 

a score=3116
s mm6.chr8_random  11989908 156 +  24571640 CCATCAGAGACGTAGCTTGTTGGTGGCTCGATCCGGGACACAATCTCAGCCAAGTCAGTGAACCCAGAACTTGGGAAGGCAAGTATCTgtggggtggggtggggtggggtgggTGAGACTTTGGGAGTAGGGATGGTCTGAAGGGTTTTAAGAGCT 
s fr1.chrUn       259916270 144 + 349519338 CCTTCGGTTACGTAGCCTTGGACCGGCTCGATCCGGGACACGATCTCTGCCAGGTCGGTGAAGTCGGCGCCCGAACACGC--------GCAGGACTGGAAGACAAGAAGAGTGTGAAACAAACGCAGC----GTGATCTCCGGGGTATTTAGTGCT 

a score=5260
s mm6.chr8_random  11990418 150 +  24571640 GCTTACATCTGCACGGCGACTCTCATTAAGGTCTGTAGATCTCCGGTCTGTGAGCATTTTCTCAATGACTTCACCACGGGTCCAGCCTCCAAAGACAGCCTTCCCATACTGGTAACCCACATCCTGCAAGAAACAACGAGGCTGGGACGA 
s fr1.chrUn       259916424 150 + 349519338 GCTCACGTCGGTGAACTTGCTGTCGTTGTAGTCTGCAGAGCGCCGGTCTTTCAGCATGTTCTCGATGATGTCGCCCCGGGCCCAGCCGGTAAATACCACCTTACCGTGCTGATAGCCCACGTCCTGAGGCAGGTTAAGAAGAGATGATGA 

a score=16270
s mm6.chr8_random  11991239 318 +  24571640 TACTCACATAGATCTGGTCAAACTTTCCAAAGTCCATGGTCTTGAAGCAGTCAATGGATGGACGAAGGTACTCGCAATAGGAGCTGGACTTGACGACTTCTAGCTGCCGCACACAGGACACGTACGCCAAGCGGGACTGGATCTCAGCCATGTCTGGA-----------------------------------------------------------------------------ACCTTTACCTTGTCTGCCCAGGGGTTTAGCCTTTTCCACAGCAACCACCAGCCAGACAGGCTGTCCCCATAGGTGCTGAGATCTGTCTCATCCTGGCTTCCAACGTCGATGGCAATGACCGTTTTGGCTCCCATGCTTCGGGCAATATCCGCTGTGGAGC 
s fr1.chrUn       259917075 395 + 349519338 TACTCACGTAAATCTCATCAAACTTGCCAAAGTCCATCGTGTTGAAGCGGTCTATGGGCGGCCTGATGTACTCGCAGTAGGCGCTCTGCTTCACCACCTCCAGCTGCCGCACGCACGAGACGTACGCCAGCCGGGACTGGATCTCTGCCATGTCGGGGACCTGCAGGAGAGCCAGGAACTCTCACCTCAGAAACGGTCAAGTTCAAACTCCAGTAAACGGTAAAACGTGGCCGTTACCTTTACTTTCTCGGCCCACGGATTGAGTCGTTTCCACAACAACCACCAGCCAGACAGGCAGTCGCCATAGTTACAGAGGTCGGTCTCATCTTGGCTGCCCACATCGATGGCGATGACGGTCCTGGCGCCCATGTTTCTTGCTATATCGGCTGTTGGAC 

a score=8721
s mm6.chr8_random  11994706 169 +  24571640 TGTCTGGTGATAAGTGTCCATGCAGATGTGAGTGGG------CAGCCACTTGCCTGGCAGGTTGTTGATGTAGCCACCATCCATGAGCAGGTGCCCATCCTTTGGGTCGCACAGCGGGGGTAGGTAGCCCGAGAGCGTCATGCTGGCACGTACATACCGCCACAGGGAGCCTGCC 
s fr1.chrUn       259918732 172 + 349519338 TATCTGTTGATTGAGGTGGGTG---GTGTGAGTGGGACACCACCACTACTTGCCTGGTAGGTTGTTGATGTAGCCACCGTCCATTAGCAAGTTGCCATCTTTGGGATCGCAGAGAGGTGGCAGATACCCCGAAAGGGTCATGCTAGCTCGCACATAGCGCCACAGAGAGCCTGAC 

a score=7174
s mm6.chr8_random  11994950 148 +  24571640 CTGACCTGGAACGTTGTTAACGTAACACCCGTCCACCAGCAGGTGCCCGTCCTTGGGGTCGCAGAGTGGGGGCAGGTAGGGACAGTAGGAGGCACTGGCCCGGACGTAACGCCACACGCAGCCTGTGGGGGATGGCGGGAGGGGGTGA 
s fr1.chrUn       259920261 148 + 349519338 CTGACCTGGGACATTGTTAACATAGCAACCATCCACAAGCAAGTGGCCATCCAGGGGGTCGCACAGGGGTGGTAAATAGGGGGTGTATGACGCGCTGGCTCTAACATAGCGCCAGACGCAACCTGTCGGGAAATGGAGATGAGGAGGA 

a score=8070
s mm6.chr8_random  11995312 275 +  24571640 ACCCACCATCTTTGTGGACGCGCATGGCAGAGGCAGTGATGTCTGTGGTCACATTGAAGTAAGGCAGCCACAGGTCCTGG-------------GAAGGGGTGAGAACCAAAGTGGAAGATGG-------------TGGAAAACCCCGGGGAAGAGGCA-------GCAGGGCC---------------------AGGGGTAGGGGACGGACA------------------------------TACCTCAATCTGCTTATCCTGGAAGACACGGTGGATACTTCTGTTAAAGGCTGAGCCAGTAAACATGGAGGTGACAGGATATGTGAGGTCCAATACAGGCTCCAGTACAGAAGTCAT 
s fr1.chrUn       259922208 359 + 349519338 ACTTACCATCCTGGTGAACACGCATGGCTGAAGCTGTAATGTCAGTTGTCACATTAAAGTAGGGCAACCACAGGTCCTGGTGGCACAAAGTAAAGAAGGTTGATAACTAAACCGCTAGTTTTCTTCTGACTCACTTTAAACACACAAGGCTAAAGGTAAATATGTGCAGGACCTCTAAATTTATCACGGCTGTAAAAGTCCTGACACAGACAAGAACTCCAGGAATGCGTTTCTTTCCCTCTCACCTCAGCTTGCTTGTCCTGAAACACCTTATAGATGCTTGAGTTGAAGGCAGAACCGGAAAACATGGAGGTGATGGGATACGTCAGATCCAGCACAGTTTTAAAAACTGAATTCAT 

a score=10796
s mm6.chr8_random  11995814 504 +  24571640 CACACCTTGGCCCACTCCCGGGCTCGTTGTTTAGTTCGGCTGGCGCTGCGTTCCTCGGCATACAAGGCCCCAATGAAGGAACCTATGGATGTGCCTCCCACAAGGTCGACTGGGACTCCTGCCTCCTCTAATGCCTTCAGCACCCCAATATGCGAGCAGCCTCTGTAGAATAGAGGGGAGTCGGTGACAAGCTGGGGATCTCTGGGGACCTA--CCCCCAGGAATTCTCTTCTCACTTCCCCTC-------CTGAAAAAAAAAAACACACTAA-----------------CCAGGCTGTGGGGGTGTCTCCCGGGTAATAAGCTCCACCCCTTAC---------ACATCC------TTAGGACACAGTAAGGAAGCTGTGTCTTCTACT---------------TAGCCTGTCTCTTACCTGGCTCCGCCCCCACCCAGCACCAGAGCAATAGTGTTTCCTGTGAGTACTCGTGCCAAGCGGGAGAAGTCGCTGTGACGGTCTGCACGCCTGGAGAAAACCTTCTCATACAGCTCATGCT--GGGATCCAGGAGAGAATAAA 
s fr1.chrUn       259922673 544 + 349519338 CGTACCTTGGACCACTCCCTGGCCCTCTGTTTGGTTCTGACGGGACTCCTCTCGTCAGCATACAGCGCACCAATGAATGAACCGATAGACGTCCCACCCACTATGTCAATAGGAATCCCTGCTTCCTCCATAGCCTTGATCACACCCACGTGAGAGCATCCTCTGCAT----GAGGGAAAAC----ACACATAGAGCA------GGTACTTAATACTCCATAAATAAGCTTGTCAGTTTAACTTGGCATGGCTGTATGAGTTAAGTTTATTAAGTTTGTGACCAAAAAGGCCTGACTG-AGGAGTGAATGAAAGAAAACTCGAACTACAGATTGCAATTGAACAACATTCAATTAATGAGAGCAAAAAAAGGAGGTGAATACATCTGCTGGATGAAACCTGCTGTAGTCTG---CTCACCTGGCGCCGCCTCCTCCCAGCACAAGAGCGATGCTGTTTCCTGTCAGGACTCGGGCCAGCCGAGAGAAGTCGCTGTGCCTATCTGGTGTTTTCTCAAACACCTTCTCGTATAGATCCCGCTGCGTGATCACGGGAAACATAAA 

a score=13531
s mm6.chr8_random  11996823 578 +  24571640 TCCCACCCCTTACAAGTTTCGCTGGGCTGCGCCGTGAGAAGAGGCGGCGAGGACAGCGCAGGTGCAGGTGCCCTGAGCACCAGCTGCGCATGTTGAGCCACTCTACAGTGCGCGTGGGACCAGGGCCTTCCTCCCGGTGCAGCAAAACCAGTTGCTTCAAGGCACGGACAGCAGTGTTCTCTAACATTTGCTCCAGCTATGGAAGACAGAGACAGGTGGAGGTCATTGATACCTTCTCTACCCACACCCGGCAAAGCTCAGCTCCCTCACAGAACAGCAGCATGAGTGTACATGGCCTTCCACAGGCACGGAAGGACAAGGGATGAGATCCTGAGGGGAAGACTGAGGTGTATGTGTGGGTAATCAGTGCATACAGTCTCCAGACCTGGCCAACAGTGGGTTCCTGGTCCCCCAGGCCCACAATGAGGATGCAGTCGGCCTGGCGCAGACAACGGACGGTCCAAGGCGTCAGGGATGTGTCAGTTTGGTAGAGCACAATGCGATGGGCATCTTCCTGCTGGGCCAACCACCCTGACAGCCGGAATTCTTGAATGCTGAGATATAATGAGGGAGGGTCA 
s fr1.chrUn       259923263 476 + 349519338 TTCCGTTTCTTACTAATTTGATGGGGCTGCGTCTGGAAAAAACTCTACGGGGACATTTGAGGTGAAGATGCCCTGAGCACCAGCTGCGCATGTTCAGCCACTCGACTGTCCTGGATGGACCTGGTCCATCCTCTTTATGAAGAAGGATCAACTTTTTTAGAGCCCGGACAGCAGTGTTCTCCAGCATCTGTTCCAACTGG-------------AGGGAGAGATAAAAGAAATCCACTCTA-----------AAAGATTCTGTT---------------------------------------------------------------GGTCCTGGAGGTGATTTT----TTCCATTGTATTTAATATGGGCAT-----------ACTTCTCCGAGGGTGGGCTCCTGATCCCCAAGTCCCACAATGAGGATGCAGTCAGCCTGGCGGATGCAGCGCTGGGTCCACGGTGTCATTCTGTTGTCGGTTTGGTAAAGGACGATCCTATTTAGGTCCTCCTGCTGGGCCAGCCAGCCGGAGAGACGGTACTCGTGGATACTGATGAATACAGGAAAAGAATTA 

a score=4548
s mm6.chr8_random  11997937 417 +  24571640 ACACACCTATCCAGTGCTGAAGCCCCCAGGAGTGCCCGGATGACGTCACTGTTAAGGAGGAGCGTGGGACCTAGTGGGGTTGAGGAATGGAAGTTAGACAGAGCGCTTGTCACCCATCCCCACGGCTTAGGCTCCGTTTCCCTCGCACCCACCACCCACTCACCCACCACTTAGTACGGGTGACTGGAGTATAGACACACCGTTCCACTGAACAGATTCCCTATCGCTCACCAATAGCTTGCAGAGCATGCTGCAGTTCCAGAGTAAAGGCCATCATGGGCACCTCAGCACACACAGGGAGGATAGCTACAGTAGACAGATTGCTGGCTGGGTTGGTCAGTTCCGAG----------TGCTGCGGAACACTGAGCCCGGAGCCTGTTGAGACACCAATCAGGGATCGGCTGAGCAACTCTGTGTTCA 
s fr1.chrUn       259924523 331 + 349519338 ACCTACATGTCCAACGCAGAAGCACCCAGTCGCTCTCTGATGTTGTCACTGGTTAAAAGTAGAGTGGGCCCTA-------------AAAGAGGTTTTTCACAAAAGATACTAACTTTAACAACAATCTGAG------------------------------ACCCCTCAAACGATACAGCAGACTAAAGTGC------------------------------------TACCTATTGCACTGAGGGCGTGGCTGAGCTCCAGGTTGAACGCATTGATCGGCACCTCGTCACACACGGGCAGAACAGCCACGGTAGAGAGGTTGCTGGCAGGGTTGATGACATCGGTGTTGGTCGTCATGCT-CGGCAGACTGAAGGCGGATCCTGG---------AAAATAGGATCAG-------ACTCTGTGTTCA 

a score=14571
s mm6.chr8_random  12000528 889 +  24571640 GTGAGACTGAAAGGTCTCACCTTTGTTTCCTTCACCTGGGAGGCTAGAAATACCATTACTTGGGCTGCAACCTGACTAGAAAAGCCAGGCGCG-CATGCGca-----cgcgcacacac--------acacacacacacacgcgcacacgcataggcgcaaacacacacacaAGCCACGGCCCCTGCGGTCCCCAGCCAGAAG---ATGCAC------CTGTGGGTACCGACGTTTGATGTGGCCTAAGGTGCCCTCGGGAAGCTTGGCCAGCTCAGTGTCTCGCACTGCGTGTACAGTGGTGGCTCGTGGCTGCCGGGTCAGTGCCTCCACCTGGGATGCAAAATAAGAACTCACCCAGGTGATAATGGGGGCCTGAAGAGGCACAGAGAGTGGAGTCCAGGCTTCTCGC-CCACTTTACTGATTGTTTCTGACTCACAGGAAGGAGCCAGGGAAGAGGTCTGGGTTGGCACTAAAGTTGGGGTTGGGTCTCCAATTCCATCAGATTTCTCCGATGATGTGCATGTGGGTGAAGGGCCAACTATGCTTAGAGAGATATGGGGGCTGC-CCTTACCACGCCAATGAGATCCCCTCGACCATACTCCCCAACTAGCTCCTTCTTGCCACTGCCTCGTTGGATGACACTACGGAGACGTCCATTGAGTACAATGTAGGTGCAGTCGGAGCGGTCTCCCTGCCTGGGGTGGGTGAAAAGTGGAGAGTCAGACAGAATTGTATCTAGGGTTTGAGCA--------GTGAAGCAGGACAAGGGTGG-CACCTGTAGAGCGCACGACCAGCCTCCACAGCTGTCCAGTCAATGGCAAAGTCCATCTGGCGCACGAAGGGGGACATTCTAGCAGCCACCGTGTGAGCTGCACTCAGTACCACACTGGGTTGTGCACGCATGATCCTGAAAG 
s fr1.chrUn       259924865 812 + 349519338 GGAAGGTTACAAAGCCTGACCTCTGCT-CCTTTACCCGAGAAGGGACCACGAGCCT-------GCTGCAAGTTGCCTAGAATCTTTTGACCCAACAGGTGGATCAACCGTGTCACCACCTGATGTGACAAAAAAAGAGAAGAAAATCAGCACCATTGTATCTGAGCACACAAAAT---------------CCAAGTCAAAAGTAAATGAACTCTGACCTGGGGGTACTGTCTTTTGATGTTTGTGAGGGTTCCCTCGGGCAGCTTCACCAGCTCCGTGTCTCTCACAGCGTGGACAGTGGTGGCTCTTGGCTGCTTGGTTAAAGCTTCCACCTAAAGTACAAGGAAAAATA----------GACAATGCAGAGCTGGAAC----CATAAATCTG---CCATCCTTTTCTTGCCACTCAACAGCTTCCACTTATCATACA--------------------TCCG-------ACTGATTTT---------TATTTTACTCACACACGTTTTTAAAATACCGTGA-------------------------TAGATAAGAACAAAGTCAGCATCTCACCACGCCAATCAGGTCACCTCTGCCATATTCAGCCACTAGTTCTTTCTTTCCATTCGCCTTGCGTATAACTGACCGCAGACGTCCGTTCAAAACGATGTAGGTGCAGTCGGACTTGTCATCCTGCCTGGAG----------GTCGAAGGATACACAGAAAGGTTACAAGTTTGTACACACACACAATGTAATCTAAGAAAGAGCCGAATACCTGTAGAGGGCTCTGCCGGCCTCCACAGCCATCCAGTCGATCGCAAAGTCCATCTGTCGGACGAAAGCGGACATACGGATGGCCACGGTGTGAGCTGTTCTCAGCACAACACTGGGCTGCTCCCTCATGATCCTACAGG 

a score=10024
s mm6.chr8_random  12001666 248 +  24571640 CTTACTCATAGAAGTGGGATTTGGAGATCCGCAGGAAGGTGCAGTCTCTCTGGGCACGTAGTGTGAAGATGAGAGGTTCCCCAGTGAGCACCGCCAGTTGCCCCACCAGCTCCCCTGGCTGTGCCACAAATAGGCACACTTCCTCAGCCTTGTCAATCATGCGCTGGTACACGTGCAGGCAGCCCCAGAGCACAAAGTGCAGGCTCACATCCTGTGGG-AGACAGAGGTTGGGAA----ATGAGATGAGCCAG 
s fr1.chrUn       259925817 253 + 349519338 CTCACTCGTAAAAATCTGACTTTGACATCTTGAGGTAAGTACAGTCTCGAACAGCCTTGATTGTGAAGATGAGAGGTTCTCCAGTGAGCACAGCCAGCTGGCCCACCATCTCTCCAGGGAGGGTCACAAACAAACAAATGGCCTCCTGCTTGTTAATCATTCGTTGGTAGACGTGCAGACAACCAGACAGGACAAAGTGCAAACTGACATCCTATAAGCCCAAAGAGGACAAGAAAGATATGAGAGAAGGCAG 

a score=4201
s mm6.chr8_random  12008501 110 +  24571640 AGCCTTACCTGGTCCCCTTGGCGGGCTATGATGGTGCCGGCTTTGGCATGATGTAGCAAGACTCTGCTGTTCAGTAGAGAGGGGTCCTGGGGAGAGAGAGGAGCTGAGAT 
s fr1.chrUn       259926173 110 + 349519338 AGTTGTACCTGGTCCCCCTGTCGGGCTAAGACGGCTCCAGCTTTTGCATTGTGTAGAGTCAATCTGCCATTTAACAAGGATGGGTCCTGGATTCAGACAAATGAAGATAT 

a score=1645
s mm6.chr8_random  12008670 161 +  24571640 ACCTCAATCCGCATCAGCTTGGCTAGCTCTCTCTTTGCAGCCTCAAA-----------GATGCTGCTTGTCTGGCGGCCCTGGTAGGGCCCAAAGGGACATCCGCCTGTGGCTGACTCATCCTCACAGTA-------------------GCTATATTCACAGGCACCCGCTGGCTGCTCCCGGAGCTCCTG 
s fr1.chrUn       259926483 173 + 349519338 ACCTCAATTCCCATGAGTTTGAGGATGTCTTTCTTTCCTTCTTCAAACAGATCTGAGGAATACCGAGTAGATGGAGGC--------------GTGAGGATTTTGTCCGTTTCTGACTCCTCCTCTGGGTACAGATAGATCCCCGAAGGGACTTCATCTACAGTAACCC----TCTTCTCCCGCTGCTCTTG 

a score=1860
s mm6.chr8_random  12009479 66 +  24571640 CCCACCAGGGCTCCAAACCTGAGATGTCTACTGGCATGGAGATGCAGCGGCTCAGTAACGGGGCTG 
s fr1.chrUn       259926987 66 + 349519338 CTTAATATAGTTTCTCACAGGAAATGTCTACAGGCATGGAGATGGCTCTGCTAAGAGTTGGCACTG 

a score=5841
s mm6.chr8_random  12010069 540 +  24571640 GGCTGGATCTCCTGTGGTGGAGTGGAGGCAGAGTCCTTTATAG-----CATATCCAAATGCCCCTCATTGAGTCTCCACATCCTCTCGTGTTGCTGTCCAACTCACATGACTGAAGAGTTCATTGGTCAGACCCAGGTAATTGTGAAGCGCCAGGAAGGTGACTCTCTGCAGCCTTACCATGATGATCTGCAGGAG---AAGGGCAGGACCAGGAGAGAGGTGTGGTCAGGCGAGTGAGCAGTCAGTGCCAGCAGCCTCCACAGAGGTCTGGCTGCTCAGAGGTGATAAGCAATAAGAACTGCCTGGCCCACCACTAAGCTGATACCCGGGATAAGCTTTGCCACCATGGAGAAGGTGAAAGGCCAGCTGACCTGTACCACTCGCACCAAACTCTCAGGGTACTTGGTGAAGACAGCAGAGAAGGCTTCTACTGGGAGTCTCAGCACTGTGGAGTCCCGTGCAGCCCTGGCTGACACAGTCCGCTGGGGATGCTGGTGACCCTGGGAG-ACATACGTTCAGGAGGAAGAGATGAGTTCAAG--TGACAAGA 
s fr1.chrUn       259928002 455 + 349519338 GGCTGCATATCTGATTGCCAGAGACATGCCAAATCATCCACAGATCTCCGTATCGGACTGCCCTGTGTACTGTCTATATGTGTGTGTGTGTGAGAGATAAACTCACATGGCTGAAGAGCTCATTAGTGAGGCCAAGATAGTTGTGCAGGGCGAGGACTGTGACTCTTTGGAGACGAACCATGATTATCTGAGGGTATTTTAAGAATGAACCAAAACAGA--------------------------------------------------TGGTTTAATTGAAATGTAAAAAAAAAATAATTTCTT---------CAACGCGTGCACTC----TACGC---------------------------------ACCTGCACCACCCTCACGAGACTCTCGGGGTACTTCCCAAATATGGAGAGAAAGGCTTCGACAGGTAAACAGAGGACAGATGAAAACTCCGCAGCCCGCGCTGACACCGTTTTGTAAGGCTTTTGGTGGCCCTGGAAACAGAGATATTCAAAAATCAAAATGACATTCAAAGCTGACAGGA 

a score=5740
s mm6.chr8_random  12010647 122 +  24571640 TGTCACTCACCGTGATGACATCAAGGATGCTCAGAAGGCTGTTGACGCTGTCTCCAGGAACCACCTCCTTCACCACACACTCCTTCCCATCCTGAGACAAGGGGCCACAGACCAATGCCAGC 
s fr1.chrUn       259929028 117 + 349519338 TGTAACCTACTGTGATGACATCCAGGATGCTGAGGAGGCTGTGGACACTATCCCCTGGGAAAACCTCCTTCACCACGCTCTCTTTGCCATCCTG----GAGGCCCGAAAGAAC-ATGTCAGC 

a score=13115
s mm6.chr8_random  12011159 417 +  24571640 AGGTCCACTCACAGGCCCTGGTAGGCAGAGCTCCAGCAGCCCATCTTGAACCACATAGATGCTGGCATCTGGTTGACCGGGCCGAAAAACATAGTCCCCCTGCCCGAGACGCTGGAAGACCATGTGCCGGCAGAGCTCCAGGAAGAGCGGCTTCTCAAAGTGACCTAGCACCCT--------AGAAGATGGGCAGTGGGAAAGGGACGAAGGAGGTCA------AAGCA-GTCCCAGACTCTGAAGGAACCCTGA--AAACACCCAGTCCCCGACACTTACCGAACATTCTTAAGCATGTAGAGTACCTCAGAGGGTAGGTGGGAATTGGCCAGGTCTCCCTCTGTGAGGTCAGCCTCCAGCACTGAAGGTGGGGGCTCCTTCCGTTGTAGGGTCGGAGTCTCCTTTTGGATACGTAAGATCCTGATGGGAGGA 
s fr1.chrUn       259929349 427 + 349519338 AAGCCAACGTACTGATCCAGTAAGGCACAATTCTATCTTCCCATCCTTCACCACGTAGATGCTGCTGTCAGGCTGCCCTGGCCTAAAGACGTGCTCCCCTTGCTGGAACTGCTTAAACACCATGTGCTTACACAGCTCCAAAAAGAGAGGCTTCTCAAAGTGACCCAGGACCCTGCAGAGGGGGACAGGGGGCAGTTGTGAACCGCTTATGGAGCTCATTCTGCAGCCACGTTCCCGCTTGGCAAGAAGTGCTACTTAAATACTGAA----AGAAACCTACCGAACATTTTTGAGCATGTACAGCACCTCAGATGGGAGATGGGAGGTGGCCACATCAAACTCTGTAAGGTCAGCTTCTAGCACTGAGGGAGGGGGTCCTTTGGCCACCAGCGTTGGCACCACCTTATAG---TGCAAAATACTGCAGGGCAGA 

a score=-329
s mm6.chr8_random 12011576 135 +  24571640 GGTTAGAAcagtggttctcaaccttcctaatgctgc------gaccctttcataca---tacagtttcttatgctgtggtgacccctaaccacaaaattatcttcattgctacttcacaactgtcattttgctactgttataaa 
s fr1.chrUn       61550980 134 - 349519338 AGGGAGAATGCTTTCCATCAGCCACCCCGGAGCTTCCAGAAATACCCATTCAGAAAAGCCACAGACTTGCGAGCGATGCTGAGGACT----------TTGGTTCTTTTGCGGATGCGCTGTGGTGTCTTTGATACTGAGGTAGA 

a score=4446
s mm6.chr8_random  12062139 217 +  24571640 CACCCCATAGTTAGGCCCTGCCCTGGCTACTCACCAGTGACTACCCTTGGATCAATGTCAAAGGTATCATTGGCTGGGTCCACATGGCCACGGTGGTAGTACCGCTGGCAGAGAGCCAAAGCTGATCCATTGGCCCAAGGCCCACCCCCACCACGGACATAGGCATACCGGCCCAGGGATATCTCAGGTAGTATCAGGTACTATGGGTAGAGAagga 
s fr1.chrUn       232667123 192 + 349519338 CACACCACAGTTA---------------ATGTACCTGTGATGATGTGTGGGTCGATGTTAAAGGTGTCGTTGGCTGGGTCAATCCTTCCCCTCTTGTAGTACTGCTGACACAGCGAGAGGGCGCTACCATT---------CACACCTACGTCGTAGACGTACGCGTAGCATCCCACTGTGGTCTCTGGCAAGGCCAAATACTG-GTGGAGAGAATGA 

a score=6303
s mm6.chr8_random  12062421 202 +  24571640 acctggtccacagcaTAGAAGATGGCTTGGTAGAGCTGCTCCTGTGTGTAGGCTGCAAAGGTGTCATCAGACCCATCAGAGTAACCCAGCAGGAAGAGATGTCGGAAGGCAATGGTGTTCTCTTCCCGGAATGTCACCACCAGCTGGTTGCTGAGCCCAAAGAGAATGAGCTGCCAAGAAGAAGCCAGAGGTTGGCCTTGAT 
s fr1.chrUn       232667642 196 + 349519338 ACCTGATCTACAGCGTAGAAAATGTGCTCGTAAACGTCGTTCTGGGTATAAACGGCAAAGGAGGCGTCCGAGGACTCGTCATAGTCTTTGAGAAAAAGGTGCTTGAAAGTCATAGTGTTCTCCTCCTTGAAGGTCACCACTACCTGGTTGCTGAGGCCGAACATCACCAACTGCAGCAAAG------GAGGGAGGCTTTAAT 

a score=-300
s mm6.chr8_random  12063598 160 +  24571640 CATTTTGGGTATACAACGGAGGT----GAGAGAGTGGCCAGTGCTGCTGGGAG----CTAAAAAGAATTAACTGACCACAAATCTCAGA---------TTTCTTCCTGACTGGTAATACCACTGTCATCATTATTACATGGCAGCAAGGGGCCACTCTAAGATGCAAACAGTGACTA 
s fr1.chrUn       100429680 161 + 349519338 CATTTTAAGCAGCAAAAGAAAGTTAAAAAGAGAAGAGAAAACCCTCCCAAAAAATAACTGAGGAGCATTATCAGCCTGCACCACTCAGACGGGCGTGGTTTACTCATG--------------TGCTGTGCTGATGATATGAAAGTTAGAGG--AGTCAGAGAGAACAAAGGTACACA 

a score=5926
s mm6.chr8_random  12063773 187 +  24571640 AAGGTCCTGCCTGGCTGGT--------CTCACCTGCACAGTGACCACCAAGATCTTGACCACCTGCAGCATCAGCTTGCAGGGCTTGCGGCCTTTGGCCCGGAACTTGTCACATGGGCTCATAAAGAAGTACTTGAGGCGGCGGCGGAGGTCTTCCTCTTCTGTGGGGGTTGTTGGGGCTGGTGAGGTCCCCACC 
s fr1.chrUn       232668032 178 + 349519338 AAGGACCAGTTTAGCCGGAACACGTTACATACCTGAGCCGTGACAATAATGATCTTCAGCAGTTGCAGGATCAGCTTGTAAGGTTTGCGGCCTTTGGCGTAATATTTATCGCAAGGGCTCATGAAGAAATACTTTAACTTCCTGCGCAGACATTCTTCTTC-----------------CTGATGCGACCCCAACC 

a score=1808
s mm6.chr8_random  12069560 107 +  24571640 AATATCCGCCCCTCTAC--TCCCAGAAACCTTTT-CTGTCTCCCATCTGAGCTACAAGCAAACCGTTTCCTAAACCAAATAGAACCGTATTTTAACAGTCCAAAGACTTT 
s fr1.chrUn       199200859 110 - 349519338 AACATCTGTTGTTCCAAGATCCCATAGGCCTGCTGCTGTATTTTGCTGGTGTGATGCACAGACCGTTTATTGAACTAAAATAAAACAAAATTAAATAATCCAATAATTCT 

a score=4113
s mm6.chr8_random  12072988 534 +  24571640 AGGACCCAGGAAAGAGATCTGCCCTGGCCTCATCATAGA-TACTGGGCT--CAAACCAGACCCGAGGCCCAGCCCAGCTGCTgcggc----cgctgca---------gcggcggcagcagcagcagcggcggcggcTGCTGCAGCTCCCTCATGCACACGCTTATGTTTGGTGAGGCTGGAGGCTTGGCCAAAGGCTTTGCCACAGAGCTGACAACGGTAGGGGCGCTCGCCAG------AATGCACGTGGAGGTGTTGTAGGAGTGCTGAACTCTGCCCAAAGG--------------------CCTTGGAGCAGTGTGGG-------CAGGCATAAGGTCGC---TCACCAGTGT----GGATTCGGAGGTGGTGCTGCAAGTTGGAGCTCTGCCCAAAGGCTTTGCCACAGTGGGGACAGCGGTAGG-GACGCTCAGCAGTGTGGGTGCGCTGATGC---TGGAGCAACGCT-----------GAGCTCTGCCCAAAGGCCTTGCCGCACTGCGGGCATGGGTAGGGACGCTCGCCTGTGTGGGTGCGCAGGTGTTTAAGTAGCGCAGAGCCCTGCCCAAAGCCTTTGGCACACACTGGGCA 
s fr1.chrUn       232681169 592 + 349519338 ATGACCCAGTAA------CCGTCCTGGCGATATGGCAGAACGCTGGGATGTCAGAGTCCAGCGTAGGCGCAGTGGTGGTGCCGCAGCTCGTCTCTGCGCAGGAAAGCGTGGAGGCAGCGAGGACACCGGTGAGCGCGGTCGT-----CCCTGTGCTTACGGCTGTGGGTGATGAGGTTGGAGCTCTGGCTGAACGCTCTCCCACACACGTGACACACGTGGGGCTTCTCCCCTGGTGCACAATAAATGTCATCATCTT-TAAATGTGC-GTCTTGTGTCCTCTGGAGTAGATTATTTTGTTGTCCTCTTGCAGTAAAGTGGGGACAAGTCAATTACCACGTAGCATTTTACAAGTGTTTTTAAGTTTGGACAGAGTGGAGACATTTGGCAGCTAAGTGTTAGCATTAGCCTCGACACGGTCAGAGGCAGGCGATTCGCGGTGGCGTGGACGTACCTGTGTGGATGAAGGTGTGCTTCTTCATGTCAGACTTCTGGTGGAAGCTCTTGCCGCAGTACTGGCAGGGGTAGGGCCGCGTGTCCGAGTGTATCAGCAGGTGAGTGGACAGGGTGGAAGAGCGCTTGAAGAGTTTTCCACACACTGTACA 

a score=622
s mm6.chr8_random  12073522 113 +  24571640 CTTGTGGG--------------GACGAGGGCCGCCGTGCGTGCGCAGGTGTTGGGCCAGCAACGAGCCA-TGACCGAAGGCCTTGCCACACACGGGACAGTGGTGTGGCTTCTCCCCACTGTGGCTGC 
s fr1.chrUn       100290923 122 + 349519338 CTGATGGGCTTTGGGCCGCTTCGCCGAggcgcgccgcggccgcccggg-gccggcggAGCAGCGGCTCAGTCTGTGGAGGCGCAGGTTGGCAGGAGA-----ATTGAGCTTCTTCCCACAGTTGCTGC 

a score=3
s mm6.chr8_random  12073639 368 +  24571640 ATGCTTGAGCAGTGTGGATCGCCAGCCAAAGGCCTTGCCGCAGGCAGCACACTGGTAGGGCCGTGCACCTGTGTGGATGCCACGATGCTGGGCCAGTGTGGCGCCATGGCTGAATGACTTGCCACAGTCGGGACAGCGGTAAGGCTTCTCTCCACTGTGTGTGCGTCGGTGCTGGCTC---------------------------------------------------------------------------------------AGCC-CAGAGCTGCGACGGAAGGCTCGCCCACAATCAGGACAAGAGAACGGACGAGGTGGACTGGCAGGGGCAGGAAGCACCGCTGGACTGGTGGCCAAGATT---------------------TCGGGGGTGGCAGTGAGGCCAGAAGGAAGGGAATCCA------CATCTGGAGCAGCAGGGCTGGGGGTGTCATTGCTTGGGTCGAGAACTAGTG 
s fr1.chrUn       100291370 479 + 349519338 GTGCTGGCGCAGGTTGGAGGCCTGGGAGAAGCAGCGGTGGCAGACGTCGCAGCGGTACGGTCTGACGCCCGAGTGGATCAGATTGTGCCGCATCAGATTGGCCAAAGACGAGAACGTTTTGCCGCAGTCCGAACACTGGAAGGGGCGCTCGCCCGTGTGCGTGCGGATGTGGTTGCGCACGTGGATGCGTTTCTTGAAGGACTTGCCACAGAGGCCACACATGAACTTGCGCTCGGGCCCGTGTGACTTCTGCCGATGGTGAAGGAGCTGCAGCTGCGTGAC-GAAGGCCTTCCTGCACAAACTACAGGA-AACAGACCC--CGGATCAGCAGCTGAAGACGCTCCCGCCGGATCCGTCGGCTGGGTCGGGCCCCCTGCCCCGGCGTGGTCGAGGGGGGCGGGGCTTCCAGCTGAACCGGGCTCGGCCGCGTCCTCCACCTCCTCAGGGCGACTGGTGTCGCCGTCCAGCGGGACAACTGCTG 

a score=1538
s mm6.chr8_random  12074089 158 +  24571640 CTTCCCCAAGATGGATCGTGGAGCTTCGTCTGCTTCAGGGTCCAGATCTTCTAAGCTGGCGTCTCCATC------TTCTGAGACAGTGTTGAGGTCTTCTGGCTCTGGCTCAGGGCTTTCAGAAA------------TAGGATCAGGATCTTTGGGACTGGAGTCCAGGTCTTCTG 
s fr1.chrUn       309833524 170 - 349519338 CTTCCTCCTGATCGGACTTGGAGCCTGGTTCTGTTC--GGTCCAG----TCGCTGTCAGACTCCCCACCACTGCTTCCCAAAACAGCTTTAGCATCTTCAGAATCGGAGTTACCGCTTTGAGCGAACTCCATTGGCTCAAGCCCAGGATTCTGGGCAATGACCTGCAGAGTATCTG 

a score=431
s mm6.chr8_random  12076731 422 +  24571640 AGCTGGCGCGCGTCCAGTCTTTGTTTGCGCCCTACCAACCCGCGCCACCCTAACCCTCCATGCACCCATGTGACTTTTCG--GGCCCCTTCTCCGACCCCCGATCTTGACTCTCCATCTGTATCTCTGTCTCCATCTGTCCATCTTTCTTCC-----------ATTCTGTCCCCTCCTCTCCATCTCTTT-----CATTATCTTCTTTAAAAAATGGATTCAGTGCCT-------ATgcatgccgtgttgcgcatggggaaatcagtagataagttccaggagtccgttctctccttattccatcccagggatagaaccag--------ggtctgcaggcttg--gccgtgcacttttaca-------tgctgaacta--tctctccagtccTCCTTTTTTCCCCATTCTCCTTCTCTACCGTAATTTATTTTTTCCTCTTTTAATTtctttgcctctggcccagt 
s fr1.chrUn       240552383 453 + 349519338 AGCTGAGGGAGGGCCACTCTTCTTTTTTGTCTT-----CCCTTGTTTTTCTGCCCCTGCAAGC-----TGAGGCTTGTCTTTGACCTTTTCTCCGCCATTTTGCCTTTGCTGCCCACCTCCCTTTTCGCTCTCATCTTTCTCCTCTTTTTCCTGAGCCTCTGGTTTCAGTGGCACTTTCTCCGTGTTTTCCTCGGCGTGGTCACATTTCTTTGCTGCTTCCAGCTTCTTCCCTTCATCTTTTTTCTCCTTCACATCAG--CCTCAGTGGACAGTTTGTCTGTATCGACTTCATCACCATCTCCAGCATGTGTTGGTGCCGGCTGGGGCTCGTCTCCAGCCACGGTGTCCTGTTCTGGTGCATCCACCCTGCTGGTCTCCTTTTCTGCTGTGCCCTGATCTTCTTCGTTCTCCCCTGCCAAAG-GATCTCTACCTCCATCTTTACAGTCCACTGGCTCTTGCTCAGT 

a score=2092
s mm6.chr8_random  12079876 149 +  24571640 ACACTTAACATCCCTTCTCAATGCCTCTGTCCAACTAGTGTC--TTCTATTTTTTTATGTCAACTACTTTAAAGATTTAAAAA-------------------------------------AAAAGATTTAGGtatttttatttgtacgtataagtgttttacctgcatgtatatctgtgtatcacatg 
s fr1.chrUn       202797872 180 - 349519338 AAACATAGCTTCTCTTTTTATTGACTTTGGTTTGTGAGTCTTGATTTTAACTTTTGATGTAAAATATTTTACAGATTTAACTAGCAGCCATCTCAGGCTCAGTTCTCCGCATCAAACGCTAAAAAGTTAAGCTGTTCTTATTTG--------ATTATACCAACTGTGTGTGTGTGTGTGCCAGACATG 

a score=4898
s mm6.chr8_random  12191290 244 +  24571640 CAGCCATGATTGGAACCATGGTAAC-------CGATTCTGGTCTCCC--ACAGATCCGGACACTGGGGTATTGCTGCCAGCTGATCGGTGGGGTCCT----------AGTGGAACAATGCCCCAACAGGTCCGAAGTGGGAAGGCGCTTGCTGGTGGTGTCAGCCCAGTTCAATCATTGCAGGACTGTCTTGAGACTCTTTGATGACCTGGCCATGTTTGTCTACACTAAGCAGTATGGCCTGGGAACAAAGGTAATGGTTAA 
s fr1.chrUn       260807202 263 - 349519338 CAACAACGATAGTAAACATGTTAATGAGCTGATGAATCCTCTCTCCTGTACAGATCAGGACGGTCTGTTTTGGCTCTCAGCTGGTTGGAGGGCTTCTTTCCAAGAGTGCTGACACGGACCTTTCACATAGACAGCTGGGGAAAAAGTCTGCTGCTGTTCTCTGCTCAGCTCAGCCACTGTCGAACCACACTGCGGCTGTTCGATGACCTGGCCATGCTGGCCTACTCGCACAGCTACGGTGTGGGAGTCAGGGTGAGAGGTGA 

a score=6954
s mm6.chr8_random  12193197 193 +  24571640 TTTTATAGGAGGAGGACATCTTCATCCGATGGCTGTCTGTCCTGAGTAATGTGACTGACCAACTGTACTATCCTTGTGAGCATATCGCCTGGGCTGCCGATGCCAAGGTCCTCCGGGTGGACTCTGCTTGGTGGTGGACACTGAACACAGCCCTCTGGACTCTCTCTCTACTTCTTGGAGCTGTCAAGTAAGT 
s fr1.chrUn       260807596 193 - 349519338 TCTTACAGGAGGATGATCCAGCCGTGCGCTGGATATCGGTGCTGAGCAATGTGGCAGACCAGCTTTACTACCCCTGTGAGCACATCGCCTGGGCTGCTGATGCCGAGCTCATCAAAATCAAGTCTGACAAGTGGTGGCTGTTCAGTACGGTGCTGTGGGGAGCGTCGCTGCTGCTGGGGATACTCAGGTCTGT 

a score=5264
s mm6.chr8_random  12247552 235 +  24571640 GATATGCTCAGAGGTTTTAACTCTACTCAGCAACCTGGCTGACCTGGCAAATGCTGTGCACTGGTTGCCCCGAGGTGTCCTGTGGGCTGGCCGCTTCCCTCCTTGGCTGGTGGGTCTCATGGGCACCATCTCCTCCATCCTCAGCACATGCCAAGCTGTCAGGGCTG-GCAGACAGGC--CGAGGCAGACAGCCCT-----TGATGAGGCCCTGAAGTGGCAGGTGGAGGACACTGTGGTGCT 
s fr1.chrUn       260808424 241 - 349519338 GATGCGAGCGGAGCTTCTCTCTTTCCTCAGGAGCATGGCTGACCTCAGTAACGCCATCCACTGGATGCCACCCGGCTTCTTGTGGGCAGGAAAATTCCCCAGCTGGTTGGTGGGGCTGATGGGCACCATCTCATCTGTGATAGGGTTGATCCAGATGGTCAACAGTGAACAGACCAGCGACACGTAGGACAGACTTGCTGCCGTTGATGTTCAGAA--AATATGTGGGAGACACTGACGTGAT 

a score=2116
s mm6.chr8_random  12253490 69 +  24571640 GTCTGCATTCCAGATATGCTGCTGGGACAGGTCCACTGGGAGGGGTGTGCAGCTTCTCTGAGTGGTGGG 
s fr1.chrUn       275513441 66 - 349519338 GTGTCTATTCCAGAGTTGAGGCTGATGGGAGCCGACTGGGGGGGGGGCGCAG---CCCTGAGTGCCAGG 

a score=7150
s mm6.chr8_random 12253593 149 +  24571640 TGGGAACCCCTGCTCTTGCTGCCCTTCTCCTTGCCACCCTTGGTGGAGGCGGCCAGCTTGGTGGGGATCTGCTGTTGCACGGCTGTCTGCCTCTGAATCTGATTGGTGGCACTGAGTAGCTGGATGGGCACATCGCTCTTGGCTGGCCG 
s fr1.chrUn       18515814 146 + 349519338 TGGGAAGCCTTCCCTTTGAGGCCCTTGTCCTT---CCCCTTGGACAGTGCTGCCAGTTTGGTGGGGATCTGCTGCTGTACGGCAGCAGGTTTATGAACCTGGTTGGTGGTGCTGATCAGCTGGATGGGCAGCTCGGGCTTGGCCGGCAG 

a score=-558
s mm6.chr8_random  12254577 109 +  24571640 aacaaggggcttcatgcacactaggcaagcacaaaactgagcca---------catttccagcTTAGTGGGTTTGGCC-----ATACAGGCCCACTAACCTCTGCCAGCACCTCCGGGGGCAG 
s fr1.chrUn       275321014 123 - 349519338 AAAAACGGGTTCTATGGAAACTGGTTATGCTGTAAATTGCACAAGACCATAGTCGTGTGTGACCTGTGGGACTTGACCTGCTCCTACCTGTTCTCCATCCAGAGGGATGAGCATGTGAGGAAT 

a score=299
s mm6.chr8_random 12254686 17 +  24571640 TGCCCCTGGTACAG-TGT 
s fr1.chrUn       18516267 18 + 349519338 TGCTGCTGCTCCAGACGT 

a score=4670
s mm6.chr8_random  12254703 148 +  24571640 TCTGTTTCTTGAACCTGCGCAGCAGCTCCAGGCGCTCACGTTCACGGTCCACTGCTCGCTGGGCCTCACGCAGACGCTCCAGGTCATGCTGGTAGGCCTGGCGCTGTCGCTCTAGCTCGGTGCGCTCCTGGTCCAGCCGCTGGCGCAT 
s fr1.chrUn       275516222 148 - 349519338 TCTTCCTCTTGAGCTTCTTCTGATGCTCCAGTCGTTCTTTCTCCTTCTCCACAGCTCGGGTGGACTCCCGCAGCCTCTCCAGGTCCTGCTGGTACGTCTCCCTCTGACTCTCCAGCTCTTTCCGCTCTTCTGCCAGTTGCTCCTGCAG 

a score=7120
s mm6.chr8_random  12254851 496 +  24571640 CTGGCGTGCCTCGCCCTCTCGCTCCTGCAGTCGCGCACCGGCCAGCTCCAGTTCCTGCTGCTGGCGTGCCCGCTCCCGCTCCCATCGCTGCTGCTCCTGGCGAAGTTGGCTTTGCAGCTTCTCCACACCGGCGCGCTCCTCACGCTGCTTCTCAAAGTTGCGTTGCCGCTCTTGCTCCAGCAGCAGGTTCCCACGTGTTGACTGCAGCCGGAACTGCTTCTCGCGCTCCTGGATGGCCGTTCTTTGCATCTCCACATAGCTATCCTGTTGAGCGATGACCGCCTGgggacagggacagggacagggacagggacagggacagggacggggTGGGTCTGATGAGAGTCATGCCCTTGGCTAGACCCAGCCCATCAGTGAAGGGCAGG------AGCAGCCAGTCCCTCCCTAATGCTGCAGGTACCTGGAGACTAAGAAGCAACTGCGACAGTGTCTGGACCCGGTGGACCAGCTGCAGAGAGAAAGCCAAATTGGTCTACTT 
s fr1.chrUn       275516523 407 - 349519338 CTGCAGTCCTCCTCCCTCTGAC----GGAGCCGGGCCTCGGTGGCCTCCACCTGCTGCCGGTGCCTCTCCCGCTCCCTCTCCCAGCGCTGCTGCTCCTGCCGGTGCTGAGACTGCATCTTGTGGAAGGTGGCCAGCTCTTCCCTCTGCAGGGCCAGCGTGCGCTGCTTCTCCTGCTCCAGGAGCCCGTTCCC------------------------TTTGTGGCGCCCGGGCAGGGCGGCCCGCTGCAGCTCCACGTGGCTGTCCCACTGCGATATGACGGCCTGGAGACGGAGAGGTCGTCGGGAA------------------------------------------------GGTTAGAC---GTCTGCTGGCGTACAGCAGGTGTGCTGGGAGGCAG---CTCTCT-----------TACCTGCAGGCTGTAGAGCTTCTGGGAGAGCATCAGCACTCTGTCAAAGAACTGAGAAAAGACAG--AAACAGGTTCACCT 

a score=2713
s mm6.chr8_random  12256514 188 +  24571640 TGCTAGGGCTTCCCACACTGTCATAGCCCCCGAAGGTCTCAGCCCGCCGAGGCAGGCCTGCAGAGACACTTCCCTCCTCC-------ACTTGGCTACTGGTGCTGCCCAGGTGCCGCTGGCAGATCAGGCTCTGGATGCCCTCAACTGTGAGGG---AGAGGTGGGGGACATGAGTCAGCAGGTGATGAGGTTATACT 
s fr1.chrUn       275517930 187 - 349519338 TGGCAGGGCT------GCTGTCATAGCCCCCAAAGGTGACCGCTCGCCTGGGAAGATGCCCCGACCCGCTCTCGTCCTCCTGCCGCGGCTTGCATCCTCCTCTTTCAC---TCTCGACTGCAG--CAGATTTTGGAGGTTCTCCACTGAAAGGGGTCAAGGTTGAAAGACCAGATGCAGTCAAAAACGAGTTTGAGCT 

a score=4147
s mm6.chr8_random  12258369 222 +  24571640 GCTAACTTACTCTCACTCATGGCCGATCTGAGAATCTGCTCCCCCCGCAGGGTCTCAGAGGGGTCTCCTCCTCCTCGGAAGAGGCCTCGGTTCTG---GGCTGACTCTTCCAGCCCACTCA---GCTGAGCCATCTCCAGGTAGATCTGCTGTTTCTCCAGAAGGCTCTGGGCAATCAGCTGGTCTTTCAGGCTCAGTCGCTCTACAGGAGAACCCAGAGGTGGTGGT 
s fr1.chrUn       275518158 222 - 349519338 GTTAAAGTACCCTCAGTGATGGCTCCTTTGAGCAGGGTCTCCCCCTGCTGGAGGTCTGGGGCGTCCCCTC------GGAGCAGAAGTCTGCTGCGTGAGGCTGCGTCTTCTGGACCGATGACAGACTCTGCCAGGTCTGCAAATAACTGCAGCTTCTCAGAAAGAGCCCGAGTGATCACAGCATCCTTCTGACTCAGTTGCTCTGCGAGAGAAACACGACGAAGAAGT 

a score=2864
s mm6.chr8_random  12259853 111 +  24571640 TTACCTTGAAATTCCTGGAGTTTCATGGTGCGGGCTTCAGCTATCTTTTTCTCCTCAGCCTCACTGAAAACGTCCTCCTCCTCGTCAGGACAGCTG-------CAGGGAGAGGAGGGG 
s fr1.chrUn       275518731 103 - 349519338 TTACCTTGAAATTCCTTGAATCTGAAAGCCCGTGCT---------------TCCTCTTCCTCACTGACCAGCCTCTGTTCTGTGTGAGGACAACTGAGACAGACATGGGGGGGGGGGG 

a score=9909
s mm6.chr8_random  12311769 252 +  24571640 CTTGTCTCACCTCTCCACGGCCCGGCGGATGTGGGCCATCCAGATGTTCCTGTCCTCTTTGGAGCTGGTGTACATCTCATACATCTCTGGCCCCTGCATGGAGGCGCTGATCAGGAACATGGCCTTCTCCTCGTTGGCTACCTCTCTCACGATGAGCTTTTGCAGAGAGATGACGGGTGGCTTTGAGTCCTGCATGGAGGAAGGTGATGGAA------------ACTTAACTCTAGTCTTGCT----ATATCCAAACGCTGGAGTCTG 
s fr1.chrUn       275518892 265 - 349519338 CTTCACTTACCTCTCGGCAGCTTGTCGTATGTGTGCCATCCAGCCGTTGCGCTCCTCCTTGGAGGTGGTGTGGATCTTGTACATTTCCGGCTCATTGGAGGAGGCACAGATGAGGAACATGGCTTTCTCCTCGTGGGCCACTTCCCTGACGATCAGCTTCTGGAGAGAGATGACTGACGGCTTGTTGTCCTG---GGACACAGACGAGGGAAGGGAGACCATTCATTTACCATTTATTTTCCTCAGAATATCCACATAAATGAGTTCG 

a score=4207
s mm6.chr8_random 12475165 283 +  24571640 GTCTGGAGTGAGTCAACTGTTGACAAAGGCAAGAGTGACAAAGGGAACACTGACAAAGGCAAGAGTGACAAAGGCAACAGAGACAAAGGTAAGAGTGACAAAGGCAACAGTGACAAAGGCCACAGTGACAAAGGCCACAGTGACAAAGGCAACACTGACACAGGCAAGAGTGAAAAAGGCAACACTGACACAGGCAAGAGTGACAAGGCCCCAGCTCTTCTGATTCATAGGATTGGCACAGCCTTTCTTGGCGTGG---GGGGTGGCA-AGGAAGGATTTTAACAGG 
s fr1.chrUn       59585059 266 - 349519338 GTCTGGACAGA--CAGGTGT-GTCACAGGCAGGTGTGTCACAGACAGGTGTGTCACAGGCAGGTGTGTCACAGACAGGTGTGTCACAGGCAGGTGTGTCACAGGCAGGTGTGTAACAGGCAGGTGTGTCACAGGCAGGTGTGTCACAGACAGGTGTGTCACAGGCAGGTGTGTAACAGGCAGGTGTGTCACAGACAGGTGTGTAACAGGC------------------AGGTGTGTCACAGACAGGTGTGTCACAGGCAGGTGTGTCACAGGCAGGTGTGTAACAGG 

a score=26484
s mm6.chr8_random  12532007 618 +  24571640 TTTGCTTTGCCTTTATTATCTGCCTTCTAGTGTGCCCTGGTATGGACATCCGGAACAACCTGACCAGGCTACATGAGCTGGAGAACTGCTCAGTCATTGAGGGCCATCTGCAGATCCTCCTGATGTTCAAGACCAGACCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATCATGATCACAGATTACCTGCTTCTCTTCCGTGTCTATGGTCTGGAAAGTCTGAAAGACCTCTTCCCAAATCTCACAGTCATCCGAGGCTCCCGTCTCTTCTTCAACTATGCCCTGGTTATCTTCGAGATGGTCCACCTGAAGGAGCTGGGGCTTTATAACCTCATGAACATCACCCGGGGCTCTGTCCGCATCGAGAAGAATAATGAGCTCTGCTACCTGGCCACTATCGACTGGTCCCGTATCCTGGATTCTGTGGAGGACAACTACATTGTACTGAACAAAGATGACAACGAGGAATGTGGGGATGTCTGTCCAGGCACCGCCAAGGGCAAGACCAACTGTCCTGCCACTGTCATCAATGGGCAGTTTGTGGAACGGTGCTGGACACACAGTCATTGTCAGAAAGGTATGCTGAAGGCAGTGCCTTTTAAAGATTTCTCCG 
s fr1.chrUn       330963226 607 - 349519338 TTAACTCGCCCTTTTTTTTTTTCTTTCCAGTTTGTTCGAGCAAGGACATCCGGAACAGTGCGACCAACCTGCAGGCTCTGGAAAACTGCACCGTTATCGAAGGCCATCTGAAGATCTTACTCATTTTTGGGACCAAGCCAGAGGATTTCCGAGGCCTCAGCTTCCCTAAACTGGTAGTGGTCACCGATTACCTTTTGCTCTTTCGGGTTTATGGGCTGGAGAGCCTCAGCGACCTTTTCCCTAACCTCACCGTGATCAGAGGCACCAACCTCTTCTTCAACTACGCTCTGGTGATATTCGAGATGCTCCAGCTGCGAGAGATCGGCCTCCATAGCTTGATGAACATCACCAGAGGGGCCGTAAGGATCGAGAAGAACCCAGACCTCTGCTACCTCTCCACACTGGACTGGTCTAAAATCCTCGACTCGGTGGAGGACAACTACATCATGGCCAACAAAAACGACA---GGGAGTGCGGAGACGTGTGTCCGGGGGCGTCGGTGGGAAAGACCACCTGCCAGACCACCACCATCAACGGCCACTTCAGCGAGCGCTGCTGGACTCAGAAATACTGTCAGAGAAGTAAG--------AGTCCTTTTCTTATACTTGCCCG 

a score=6421
s mm6.chr8_random 12819984 254 +  24571640 AGGCAGGAGGAG------GTTGAATATTTTGGCCTGAAACTAACTATTCACTATTCTGATTGCCTGACTTTTTTTTTTTTTTTTTCTCTTGAACATTTCTAGGTGAAAATGAATTGCTTAAATTTTCTTTCATTCGGACATCTTTTGACAAGATCCTGTTGAGGTGGGAACCCTACTGGCCCCCCGACTTCCGAGATCTCCTGGGATTCATGTTGTTCTACAAAGAGGCGTAAGTG--------AAAG----GAGGTAGACTTTTGCttctt 
s fr1.chrUn       73978888 253 + 349519338 AAGCAGAAGGAGCTTCGTTTTGCATCTTCTGGTCC--AAGCACGCGTTCACCGTGTTCACCG--TGACCCTCTGCTGTGTGTCGT---------------AGGTGAGACCAAGCTGCTGAAGTTCACAACGATCAAGACAACCTTCAATATGATCATGTTGAAGTGGGAGACCTTCTGGCCCTCGGACTTCAGGGATCTGCTGGGCTTCATGGTTCTCTACAAAGAGGCGTAAGTGCTCACGCCAAAGCACAAAGGGAAATTTTTACCCTTT 

a score=8335
s mm6.chr8_random 12822197 308 +  24571640 AGCCCTTATCAGAATGTGACAGAGTTTGATGGGCAGGATGCTTGTGGCTCCAACAGCTGGACTGTGGTGGATATTGACCCGCCCCAGAGGTCCA---ACGACCCCAAGTCTCAGACCCCAAGCCACCCTGGGTGGCTGATGCGGGGCCTCAAACCCTGGACCCAATACGCCATCTTTGTGAAGACCTTGGTTACCTTCTCTGATGAACGGCGGACCTATGGAGCCAAAAGTGATATCATCTATGTGCAAACAGATGCCACTAGTAAG---TGTGTCCTGGGAACAG-GGGTTTGCTGATGAATTGACACTATTAT 
s fr1.chrUn       73979219 306 + 349519338 AGTCCATACAGGAACGTCACGGAGTTTGACGGACAGGACGCGTGCGGCTCGAACAGCTGGACCATCGCTGATGTCGATCCTCCGTCTCGCCCCACGGACGGCAAGAAGCCGGAAAACCCAAAGCACC---------TGATTAGACCACTGAAGCCTTGGACCCAGTACGCCATCATGGTCAAAACCCAGCTGTCCGCGTCTGACGAACACCAGGTGCACGGAGCCAAGAGCGAGATCATCTACATCTTGACCAACGCATCCAGTAAGTCCTGCTGCTTCAAAACAGCTTGTTTTTTTACCACTTCAAAATATTAT 

a score=8653
s mm6.chr8_random 12825568 311 +  24571640 CTGTCACTACTTTTCTCTGATGTTATATAATGCTGTATC-----AAACAATTGTGGTGTCA---CTTGGGAAACTCCTCCCT-GCTGAGATACACCCAACAACTTACATACTCTCCCTCATGGTAAATCTGTTTCTCTTCTCCTTTCCAGATCCTTCTGTCCCCCTGGATCCCATATCAGTTTCTAATTCCTCATCTCAGATTATCTTAAAGTGGAAGCCCCCCTCTGACCCCAATGGCAACATCACACACTACCTGGTGTACTGGGAGAGGCAAGCAGAGGACAGCGAGCTGTTTGAGCTGGATTATTGTCTCAAAGGT 
s fr1.chrUn       73979912 313 + 349519338 CTGTCAGTTCTTGTTTTTCTTGTTTTTCTTCTCCACATCCCAATGTACAGTTGCGGTAGCCTGTCTTCAGCCACTCTTTCTTCATTGAAGTCGATTTTTAAAATGCCGATTTGCTTCTCATTAT-------CTCCTTTTATCCATCTTAGATCCCTCTGCGCCTCTGGACCCCATCTCCTCCTCCAACTCCTCCTCTCAGATCATCTTGAAGTGGAAACCTCCCACCAGCCCCAACGGCAACATCACCCACTACCAGGTCATCTGTCGGAAACAGCCTGAGGACGGCGACCTGTACAAGTTTGACTACTGCCTCCAAGGT 

a score=127
s mm6.chr8_random  12825897  91 +  24571640 TGGGGTTCACTGTACCTTGATTCTCTTA---TGGAGACACAG----GTCTC----------TTTTCCTGTTTCCCAGGatgtatacatgcatgtgtaaatgtatgcac 
s fr1.chrUn       227566227 108 - 349519338 TAATATTTCTTTGACCTGGTGCTTCCTGGGCTGTACACCCAGAACAGTCTCGGTGTTGTGTGTTGATTGGTTACTTGAATGTCTGCCCTGGTGTGTAAACAGATGAAC 

a score=1594
s mm6.chr8_random  12828008 182 +  24571640 TTACATCCATGAATAACCACAAGGGTATTTTAAAAAATGGTGATAAGTGAATATTACAGAATTTATTTGCACTTGAATGAGTA-TAGATGCAT--ACACATTTCTGGTCTGACTGAGACACATTTAAGAAGGTGAATGCATAT---------CTTCTTAAATGTTACACACGGTCCCACACTCTTCTGGAAGCA 
s fr1.chrUn       227570956 191 - 349519338 TTGAATCCACCAGAGACCACATGTGTGGTTTATAGAGCTGTGATAAGTAGTGGCTAAACA--TTAGTGGCCACAGCATGAAAAGCTGATGTTTGGATAGATCTTGGATTTATCTATAAGACCTGTCGGAAGTCAAGTGAGCATTAAGTAAGGCTCCTTTAATGCAACA-ACATTTTCAGAATTTATTGAAAACA 

a score=5718
s mm6.chr8_random 12890116 163 +  24571640 GCACAGGCCATTTGAGAAAGTGGTGAACAAGGAGTCACTTGTCATCTCTGGCCTGAGACACTTCACTGGGTACCGCATTGAGCTGCAGGCATGCAATCAAGATTCCCCAGATGAGA---GGTGCAGTGTGGCTGCCTACGTCAGTGCCCGGACCATGCCTGAAGGT 
s fr1.chrUn       73981535 159 + 349519338 GCACAGG----TGGAGTTGAAGGTGGACAAGGAGTCGACTGTCATCTCCAACCTGCATCATTTCACCAGTTACAAGATAGAGATCATGGCCTGCAACCA---TCCCACCGATCCGAAACGCTGCAGCATAGCTACTTACGTCAGCGCTCGAACCATGCCAGAGGGT 

a score=2446
s mm6.chr8_random 12891267 153 +  24571640 ATAGCTAAGGCAGATGACATCGTTGGCCCTGTGACTCATGAAATCTT------TGAGAACAATGTTGTACACTTAATGTGGCAAGAGCCAAAGGAACCTAATGGTCTGATTGTGCTATATGAAGTGAGCTATCGCCGATATGGTGATGAGGTAAGGATT 
s fr1.chrUn       73981794 156 + 349519338 ACAGAGAAAGCAGACGACATTCCAGATCAGGTGACGCACGAGATCGTGGCAGCTGAGCCCCCCTATGTGTTGATCAAATGGAAGGAACCTCAGTCCCCTAATGGCCTCATCATCCTCTATGAAGTG---TTTTACGGGAAGGTTGGAGACGCAGAGGTT 

a score=4227
s mm6.chr8_random 12996669 315 +  24571640 AATATAAATGGAAAC--AAACAAATAAACAAATTCTCAAAGCCT--CTGACAGGTTAGACTCTTCTGCCT--ATTGCTTCCCCT-ACTTAAACTGAGCATGATGTCCCCACCTGAG----AGGCATGTGCCCAGGTATACAAAACTCAACTAACCATCTTCTCTTTTCTTCCAG---GAGCTGCACCTCTGTGTCTCCCGGAAGCATTTTGCCCTGGAGCG---GGGCTGCAGGCTGCGAGGGCTCTCCCCAGGAAACTACAGTGTTCGAGTCCGGGCTACCTCTCTGGCAGGAAATGGCTCCTGGACAGAACCCACCTATTTTTATGTGAC 
s fr1.chrUn       31194159 318 + 349519338 AATATAATTTAACACTCGTAAAAATCAGTAAAAACCCAATGACTGTCTGA-AGTCTGGACTACGTGACCTGTATTCCTGCCCCTCACTCA----------GAGGTCACCTAGTTAGCTCCAGAAATGATCCTGAAGTTGAGACGTTCAACCAGAGCCGTTTTTCACTCTTGCAGCCCGAGAAGCACAAGTGTGTGTCGCGGCAGCACT---ACCTGGAGCACAAGGGAGCCCGGCTGACCAACCTCGGACCAGGGAATTACTCTGCTCAAGTGCGCGCCACTTCTCTGGCAGGAAACAGCTCCTGGACCGAGAGCCTGTTTTTCTACGTGCC 

a score=2181
s mm6.chr8_random 13048571 434 +  24571640 ctggtttgtgctcagcttgctttcttatacagcccaagaccacctgccaaagaatgatgccacctaccgtgggctgggcccttccgtattactgtttaacaaaatcacactctcatagatatgtccacggactaatctgcttgaggcaattctccagttgaggcttctcctcttacatgactctaggttgtgtggggttaacattgaaggctagacaggacaCTAATTGAAGTTTTTTGGTCCCTCACTTCCTCTAATTTGGACAAAATGTCGAACAATCCATTCCTAATTTATATAGCATTTGCCTATGT--CCAGAATGCCATGGGATGTTCAAGATGTTGTGTCTCTCTTCCTCCATT-----------AGGCAGCCGGATGGGCCAATGGGACCACTGTATGCATCTTCAAACCCTGAGTACCTCAGTGCCAGTGATGGTGAG 
s fr1.chrUn       73982468 392 + 349519338 CGGGTTCTTGCCCGTCTCGGTCTTTCCAGCAGATCAGGTGTTGCTGCTCAGGTACACTGATACTCGACGTGTGCG---------TGTGTTACAGCCGATCCTGGTCTCATCTGGATCGTCATGGGTCCGG--TCATCTGCTTCATCCTGCTGCTGTGTTTGGGAATCG----------GAGTCT---TTGTG--------ATTTTCAAGAAGAAGTAAGAC--------------CTTTATCTCTCGTTCGGCCCAAACTGGAGAACGTCTAGAAGGAAC--------ATTTTTGTCGGATTCATTTATAAAACAGAAATGTTCTCGGTTCCATAA-AGACTGACTCTTTACTCTTCCTGTGGTGCTGCTGCAGGCAGACCGAAGGCCCAACCGGACCTCTCATCGCCTCCTCCAACCCTGAGTACCTCAGTGCCAACGACGGTAAG 

a score=13284
s mm6.chr8_random 13051045 238 +  24571640 CTTCTGTGTACGTGCCGGACGAGTGGGAGGTGCCTCGAGAGAAGATCACCTTTCTTCGAGAGCTGGGGCAGGGATCCTTTGGTATGGTGTATGAAGGCAATGCCAAGGATATCATCAAGGGTGAGGCAGAGACCCGTGTTGCGGTTAAGACTGTCAATGAGTCAGCCAGTCTTCGAGAACGGATCGAGTTCCTCAATGAGGCATCAGTCATGAAGGGATTCACCTGCCATCATGTGGT 
s fr1.chrUn       73982930 238 + 349519338 CTGCAGTTTATGTTCCCGATGAGTGGGAGGTTCCCCGGGAAAAGATCACGTTGCTCAGAGAGCTCGGGCAAGGCTCCTTCGGCATGGTGTACGAGGGAATCGCCAAGGACATCGTCAAGGGAGACCCAGAGACACGGGTGGCCGTCAAGACGGTCAATGAGTCGGCGAGCCTGCGAGAGAGAATCGAGTTCTTGAACGAAGCGTCTGTGATGAAGGCGTTCAGCTGCCACCACGTGGT 

a score=6911
s mm6.chr8_random 13052702 137 +  24571640 CTTGTTCTCATGCTTGTTCTGCAGGTCCGCCTTCTTGGGGTGGTATCCAAAGGACAGCCAACGCTGGTAGTGATGGAATTGATGGCTCATGGAGACCTGAAAAGTCACCTCCGTTCTCTGAGGCCAGATGCTGAGGT 
s fr1.chrUn       73983233 137 + 349519338 CTTTTTCTCTGGTGTTCTGTGCAGGTACGTTTGTTAGGTGTGGTGTCCAAAGGTCAGCCGACCCTGGTGGTGATGGAGCTGATGACCCACGGTGACCTGAAAAGCTACCTGCGTGGCCTCCGGCCAGACTCTGAGGT 

a score=6031
s mm6.chr8_random 13102980 97 +  24571640 GGCATGGCATACTTGAACGCCAAGAAGTTTGTGCACCGGGACCTGGCAGCTCGAAACTGCATGGTTGCCCATGATTTTACTGTCAAAATTGGAGGTG 
s fr1.chrUn       73983527 97 + 349519338 GGCATGGCGTACCTCAACGCTAAGAAGTTCGTGCACAGAGACCTGGCGGCCAGGAACTGCATGGTGGCCGAAGACTACGCCGTCAAGATCGGAGGTG 

a score=-543
s mm6.chr8_random  13103077 136 +  24571640 TGTCTTAGAATCCTTgagagagaaaggaagagagagagagagagagagagagagagagagagagaATATTGtgtgtgtatgtatgtatgtatgtatgtatgtatgtgt-atgtgtatgtgtatgtatgaatgtGTAT 
s fr1.chrUn       330987317 106 - 349519338 GGTGTCACAAC-------------------------------AACAGTTTTGTTACCGCCTGTGTATATCGGGATTGTTtacatatatatatatatatatatatttataATCTTTAAATGGATCTTTAAAGACATAT 

a score=66
s mm6.chr8_random  13154154 3 +  24571640 TGG 
s fr1.chrUn       330987702 3 - 349519338 TGC 

a score=7064
s mm6.chr8_random 13154157 147 +  24571640 CAGGTCCTTTGGGGTGGTCCTTTGGGAAATCACTAGCCTGGCTGAGCAACCTTATCAAGGCCTGTCTAATGAACAGGTGTTGAAGTTTGTCATGGATGGAGGCTATCTGGATCCCCCTGATAACTGTCCAGAGAGACTGTAAGTATA 
s fr1.chrUn       73983906 147 + 349519338 CAGGTCGTTTGGCGTCGTGCTGTGGGAGATCAGCACGTTAGCAGAGCAGCCGTACCAGGGTTTGTCCAACGAACAGGTCCTAAAGTTCGTGATGGACGGGGGATCTCTGGACAGACCTGACAACTGCCCCGAGAGGATGTGAGTAGA 

a score=16400
s mm6.chr8_random 13156904 460 +  24571640 GTACAGGAGGGAGCAGCCTGACTGCACCTTGAAACTTATCTACCCTGGTTCCTGTCCCCACAGCACTGACCTGATGCGCATGTGCTGGCAGTTCAACCCCAAGATGAGGCCAACCTTCCTGGAAATCGTCAACCTGCTCAAGGATGACCTCCACCCCAGCTTTCCAGAAGTTTCCTTCTTCTACAGCGAGGAGAACAAGGCTCCTGAGAGTGAGGAGCTGGAGATGGAGTTTGAAGACATGGAGAATGTCCCGTTGGATCGTTCCTCTCACTGTCAGAGAGAAGAGGCTGGGGGCCGGGAGGGAGGGTCCTCACTGAGCATCAAACGGACCTATGATGAACACATCCCCTATACCCACATGAATGGGGGCAAGAAGAACGGACGTGTCCTTACCCTGCCAAGGTCAAACCCTTCCTAACAGCGCCTTCTCCGGGAAGGATTCTTTTCTTTCTTTCTTTTT 
s fr1.chrUn       73984111 452 + 349519338 GTGCAGAAATATCCATCCTGAAAGCTAATCGTGATATGATTG---TGATTTCTTTTCCAGGCACA---ACCTGATGCAGATGTGCTGGCAGTACAACCCCAAGATGCGGCCGGTGTTTCACGAGATCATCGAGATGCTGCGGGAGGACCTGCACCCGTCCTTCCACGAGGTGTCCTTCTTCTACAGCGAGGAGAACAAGGTCCCGGAGACGGAGGAGTTCGACCTGGACCTGGACAACATGGAGAGCATCCCCCTGGACCCCTCGTCCTACTCGCAGAGAGAGGAGAGCTTAGGCAGGGACAGCGGGCCCTCGGTGGCCCTCAGGGGGAACTACGAGGAGCACGTCCCCTACACACACATGAACGGTGGCAAGAAAAACGGACGAATCTTATCATTGCCCAGATCCAGCCCTTCCTAACA--TTTGTTTTCTAAAAGGACTCCCCCCCCCCCCCCCCATT 

a score=3673
s mm6.chr8_random 13157906 140 +  24571640 TGAGAAGGTTTCATTAATCTAAGAGAAGGattttattttattttattttactttt---tttCCTCA------------------TTCACAAAATC--AGTTCCTCAAATTGACCAATAGCTGCTGCTTTCATATTTTATTTTGGGAAAGGGTGTGTATTCCTA 
s fr1.chrUn       73985229 156 + 349519338 TGAGAGGTTTTAATTTATT-------AGCTTTTAATGTCGTTTCACTCTTCTCCTCAATGTCCTCACCACATGCCTGAAGGATATTTAAACAATTGGAGTTCCTCAAACTGACCAATAGCTGCTGCTTTGATATATTTTAGTGGGAATAGAAATATATACATA 

a score=1673
s mm6.chr8_random  13293534 344 +  24571640 ATCTCTAAGAGCTGGCCAGGTGCTCCACTTGGATGGTGCTGGTGGTGACAGTGGTGACAGTGAGGCAGATG-------TGTATATGATTCT--------CTACAGGCTTATAGGGGGTCATGTCAGAGGAACAC-------TGGAATGGAGG---------------------GTTTCGGTTT-----TTGTTCCCACCATTCCCTCCCTGGGGAGTTGTCCCAAGGGACTGGAAGTGTGGTGGTTGTAGAGGTGgctgctcctgctgctgctgcctctgctgttgctACCTG---CAAAGCTTGGGCCTGGGCCT-------GGGCCAATGCTGT--TGCTGCCCCT-----------TGCATTTGTTGTTGAAGATCAGGAGGGTTGTGTTTGCACATGTTTCATAAGGTATG 
s fr1.chrUn       247256084 390 + 349519338 ATCTTCAAGAGTTG---AGGTGCTCCACTTGAATGGTG--GACGTCGAC-------ACAGTGAGATAGAGGTCCTTGCTGGAAGTGATGTTCTCTACTGCTACTGGTTTATAGTGG---ATGTCACCGGCAGACACTGTTTTGTACTGGTGGAGATCGAACGGACAAGAGATTGTTTCTGTCTGAGGGTAGTTCCTCTGGCTCTGTCCTTGCTGGTTCCTGCC----------CACTGCTCCGTCCCCAGCGCCTGCTGTTCGGCTCGACCCTCCATTTGCGTTCTCTACCTGGTTCTGGGCTCCGGCCGGGCCCTGCCTTTGGTTCCGTTTCTGTTGTGCTGCCTGTCCTGCCATGACTGCTTGTGCAGTCAACTGCTCCGGGTTGTGTTTCTCCATGTGTTTCACCAGATACG 

a score=4862
s mm6.chr8_random  13293878 158 +  24571640 TTTCTGATGAATATGCCCGATGACAGACTGTGCCAGTATAAACCCTGGCATGTCTCACTGTGTGTGTAGATTCATGAACTGC------------GTCTGTATATGCTTGCTGACAGTTGTGGGTGGTATTTGAAGGGTTTATCCTTGTTGTGCTGCCGTCTGTGAGACTG 
s fr1.chrUn       247256610 166 + 349519338 TTACTGAGGTATATGTACGGTCACACAGGCCACATGAGTAGATTTTGGCGTGTTTCACTGTGTGCGTCGACATGTGCACTTCTAGGCTCGCTGAATCTATGTATCCTTTATTGCAG----AAGGTGCATTTGTAGGGTTTATCCTTGTTGTGTTGGCGCCGGTGGGACTG 

a score=3753
s mm6.chr8_random  13294036 83 +  24571640 CAGTTTGGAGAGTTATGTGAAAGCCTTCTCACAGCCTGGGTGTGCACATTTGTATGGTCTGTCACTCACCAGTATGGATTCAG 
s fr1.chrUn       116178016 79 + 349519338 CAGGTTGGACAACTGAGTGAAAGACTTTTCACAGCCTGGATGGTTACACTTGTATGGGCGG----TCACCAGTGTGTATCCTG 

a score=9522
s mm6.chr8_random  13294119 268 +  24571640 GTGTGCTAATGCAGATGTGAGAGCTGGCAGAAGGATTTCTCATAAAAGTTACAACTATAGGGCTTGGCCCCTGAGTGGATAAGGATTAGTGGATAGGGTCAGGGAGGAGATGTTGGCAAAGGTCTTGGAGCAGTGTGGGCACTTGTGGGGCTTGGTCTCAGTGTGTGACTGGGAGTGGATCTGCATGTCCGACTTTGAGTAGAAGGTCAGTGAGCACATCCTACAcccagggtcacacaacaagttcgtggtggagatgggaattgaa 
s fr1.chrUn       247258036 250 + 349519338 GTGTGCTGCTGTAAGTGACTGAGTTGCCTGAAAGATTTCTGGCAGTAGGAGCAGGTGTAGGGCTTGGCCCCGCTGTGGATACGGAT----GTGCTGGGCCAGGTAGCTGGAGTTGGCGAATGACTTGTCACAGTGAGGACACTTGTGAGGTTTGGCCTCTGTGTGCGATTTGGAGTGGATCTGCATGTCAGACTTATTGAGGAAGGTCGCCGCGCACATCCGGCACCTACAGGCGGAGA--------------GACATGGGAACGGAA 

a score=-252
s mm6.chr8_random  13294387 54 +  24571640 tccatg--tgcccaaggttctgtccattt--cctgtgccacagttccctttgcTCCTG 
s fr1.chrUn       116180113 58 + 349519338 GCCTTAATGGCACACAGTCAAAGCAATTTAATTTAAACCACACTTCCACGTATTTCGG 

a score=-1163
s mm6.chr8_random  13294441 221 +  24571640 TAGGGCTTTCCATCTTTCTGATGGTCATCATCCCCAGGGGCAAGGATGTAAGGGTCCTTCATCTCAGGAAGCCCTGATTCCAGTATTCT-------CATCT----------TCTTGCAGCCCTGAGGAGGCTT---------AGGAGGAGCCACAGTGCCACCACCACCACCATCTCC--------ACCTCCTTCCTCAATTAGGGTTGATGCTATTTTCTTGGAGAGGTAGGGCTTGGGAGACAGGGGAAGAGC 
s fr1.chrUn       101854590 231 + 349519338 TATGGTTTTTCTCCTGTGTGGGAGCGTTCGT------------GGTTCTTCAGGTCCTTCAGCTCCGTGTACGTT--TTCCCACATTCCTCACAAGCATATGGCCTATGACCCTGGTGGTTCCGTCTATGCTTTCGGAACACAGAGGGGTCCGCAAAGCTCTTGCCACACTCACCACAGAAGTAGGGCTTCTCTCCTGTGTGAGAACGCATGTGGACCT----------TCAGTTTTGAGAGGGTAGGGTAGCTC 

a score=1532
s mm6.chr8_random  13294662 357 +  24571640 TGAGACAATCATGGGAGCCAAAATAGGGAAAGTCTGAGCTGTAGAGGCT---ATGGTCACAAGAGAGTCTGATGGGGATGTGATTACCAAACCTGGACGGTCAGGCGTGAATCCAGTAGATGGTACAGGAAGCACTGTGATATTCTGTGTAACAGATGATTGACTGTGTGGGGTCAGCTATTCTGACTTGGACTCTGT-GTCCATGCTGATGCTAGAAGACAGGGACACTGAGGCAGGGACTGTTACAAAAAGTGGGATAGTGAGGTGGT--GCCAGTCCACAGTCCTTCTGTGTCAATAGCTGATCCTTCATCTTGTTGATGAACACAGTGTTTTCAATCTGCTCTGAGGCTGTGGGGATAA 
s fr1.chrUn       247259744 322 + 349519338 TGGAGTAATTGGGGTTGTAATTTTAAAGTGAGCTAAACCAGAAGAGGCTGGGATGGTAGCAATCTAG------AGGTTTTTGATGTGCAGAGACTAACCTGCTGTCATTATGCCTGTGGATGGAACAGGCAACA------GGTTCTGGGTGCTATGAGAT---------GGGGTCA-CGATTCCGGCCTGTCCGCTTCCATCTGTCTTTGTCCCAGATG-TGGGGATGGTGAG--AACAGCTGTTT--GGTAGTGTGACGCTGAGGACGTAGGGAAGGAAACACTCTTGTCCTG-------CTGCTCTTTCATCTTGTTCAGGAACATGGCATTCTCTATCTGGTAT-------TGGGGATAA 

a score=8408
s mm6.chr8_random  14257966 218 +  24571640 AGCTCTAGTGGTGCTTCAAGGGGTAGAGCACTCAAGATGGTAGGAGGATGACCTGAAAAAC--------------CTGTGCACTGTTTGTTGTCAGACTTTGGAATGACAAGGGACATCTACGAGACAGATTACTATCGGAAAGGGGGCAAGGGACTGCTTCCTGTGAGGTGGATGTCACCTGAGTCCCTGAAGGATGGAGTCTTTACTGCTTCTTCTGATATGTGGTGAGT 
s fr1.chrUn       227570376 224 - 349519338 AGGTCCAGTGG-------GGGTGTAAAATGTCTAATAGGTGAGAAAAGTCACTGGGTAAACTTATTCGTGTGTGTCTGTCCACT-CTCGCGAGCAGATTTCGGCATGACGAGAGACATTTATGAGACCGATTACTACCGTAAAGGAGGTAAAGGTTTGCTCCCCGTCCGCTGGATGTCCCCTGAGTCTCTGAAAGATGGAGTCTTTACCACCAACTCTGATGTGTGGTAAGT 

a score=4662
s mm6.chr8_random  15752992 140 +  24571640 CACGTACCACAGAAGCAAAGACATATTTCTGATCTTTTTCTTGCAGCAGCAAAAGCACATCGGTCAGCAGGACAGCGAGGACATCTGCAGAGAACAGCACACCAGGGAGTATCTTAGTGCTCACATGTCCAAGGGGCTGG 
s fr1.chrUn       275519155 138 - 349519338 CGCGTACCACCGAGGCAAAGACGTATCTCTGGTCCTTCTCCTGCAGCAAAAGCAAAACGTCCGACAGAAGCACTGCAAGAATATCTGT-GGGAACA-CAGAACAGGCGCCACATTAATGCCAGCTGATGCCAGGAGGGGG 

a score=8358
s mm6.chr8_random  15754552 270 +  24571640 CCCACCTTTCAGGCGCCCTGAGGTGGACTTCCAGCAGAGGGCGCCTTCCAGGTGGAGCTGGCGCTGCTG------CAGCATGTCCTCCTTTCGGAAGGTTAGCCCGTTTTTGAGTTTGCCAGACGACTTCTGGTCCGTCTTGGCTGCAATCTCCTTGAGGCGCTGGTCCTTCTCATACTCACTGACTTTGGCGTCCACTTGTGAGATGATGTCTTTGATGAGGCTCAGGGCTTGGCTCAGGTCCTTGTAGTCCTCAGTGCCAGCTGT-------TACGTGTAA 
s fr1.chrUn       275519316 280 - 349519338 CCGACCTTTGAGTCTGCCAGAAGCAGCCTTCCAGCTGACCGTGCCATC---GTGCAGCAGGCGTCTCCGGCCCGGCGCCAGGTCTTCCCTCCGGAACACTCGGCCATCTTTGAACTTTCCCAGCGCCTTTGGCTCCATCTTGTTGTGTATTTCTCGGAGGCGAGAGTTCTTCTCGTGGATGTTGACCTGCGCGTCCACCTGGACGATGGCCTCTTTGATCAGACTCAGAGATCGGGTCAGATCCTTGTGTTCTTCTGTTCCAGCTGCAGACACAAACGTGCAA 

a score=6790
s mm6.chr8_random  15757139 218 +  24571640 GGTGGGCTGAGGCACC----AATCCACCCAGACC--------CAGGGGTATGGCAGAGCGTGTTCCC--ACCTTCTGTGTTCTGGATGATGCGTTCCACAAGCACCGGGTACTTGGTTATGCGCTGTGTGACCAGAAGGATGCACTCCTGCACTCCCAGCCTTCGCACAATGGAAAAGTTGCCAATTTTCTGTGGAATGGGAAACAAACAGCTTATTTTAATttttttttct 
s fr1.chrUn       275519596 224 - 349519338 GATGGGCTCCGACATCCCAGAATACGGCCATACCATCTCCAACAGAGGTGACGTGAAGCTTGGACACGGACCTTCAGTGTTGTTCAGCATGCGCTCCACCAGAACCGGGTACTTGGTAATGCGCTGCGTCACCAGCAGGATGCACTCGGTCACTCCTAAGCGCCGCACGATGGGCAGGTTGTTGGTTTTCTGAGGAG--------AAGCAGCAGGTGTTTAACATCCTTCCT 

a score=5258
s mm6.chr8_random  15759295 151 +  24571640 TTACCTTGATTAAGTTTTGAAACTTCTTGCTTTGCTGCAGCAATAGCTTGTACTGACCGACTGCATCATTGTGGCCACTACAGAACACAGCGTATTTCTCCTTCATTCTCTCCCCGGTTTCTCCTGAGAACTAATATGGACAGGAGACAGA 
s fr1.chrUn       275519862 147 - 349519338 TCACTCTGATAACGTTGTGGAACTTCTTGTTGTTCTGTTTCTGTTCTTTGTAGTAGCCGACGGCCTCCATGTGGTGGCTGCAGAAGTCTCCGTAGCACTCCTTCATCCTCTCTCCTATTTCACCTGAGAACT----TCGGGAGCAGACGGA 

a score=8864
s mm6.chr8_random  15761423 299 +  24571640 CCTACCTGCTGAACCAGGACGTCTCCGATCTTTTGGATGACGTAATTCCGATCACTGCCCTCCTCTAGGAACTCCTGCCGGCGCTCCTTAAGGCGGGCAAGGAAATGGCTGTGCATGTCCAGTAAGTCATCAGCGCACGGAAACAGACGG--CTGACTGCCTGGCCACTGAATTGCAGCTCTTCCTGCAGGGCTCTGGAGTATACTTTCAGCATGATCTTTAGTGTGCGCACGTGATGAGCCTCTGTCTGCATCAGCTCTGTAGGGACAGAGGCGTGGGAAGATTCACCTTACCTCCCAGG 
s fr1.chrUn       275520069 294 - 349519338 CCTACCTGTTCGATCAGAATATCTGCCACTGTGTTGATGGTGTAGTTCCTGTCGCTGGGTGAGGTCAGACTTTCCCGCTGCCGCTCTTTGAGGCGAGACAGAAAATGGGCGTGAAGCTCCAGTAGGTTGTCCAGGCGGGGGAACAGGCATTCCAGCCTGCCCGGGTCC--ATCTGGAGGTTTTCCTTCAGCTCTCGGACGTAGACGTGCAGCATGATCTTCAGCGTTCTGACGTGGTGCATCTCCGTCTGCATCAGCTCTGTGAGGGTCAGGGCACAGG-----TTACCTTCACTAGTAGG 

a score=4392
s mm6.chr8_random  15764653 190 +  24571640 CTTACCATATAGGACGTCCTGTCTCTTTACCACCTCCTTCTTCTGTTTCTTGGCATATGCTAAATCCACAGAGAGGCTCCAGGACTCGGCCTCAAACTCATGTGCATCTGATTCGATCTCACACCTCAGTGAAGCAATGTAAGGGTCTGGGGGAAGGACAGAATGTTGTTGGTTAAGGGTCCAGAGCTTG 
s fr1.chrUn       275520660 190 - 349519338 CTCACCGTAAATCACGTCCTGTCTCTTCACCGTTTCTTTAGAAAGCTTTTTAACGTGCTCCTGATCAACTGCCAGGCTCCAGGATTCTGCTTCCAGGTCCTGGGCGTCGGACTCCAGCTCCACCCGCAGGGTAGTGAACTGGGAGTCTGAGGACGGCACTGGCAGTGGGTACACACAGGACGTTAGCATG 

a score=-45
s mm6.chr8_random  15764843 237 +  24571640 CCATATCTCCCTGTTGCAATTATGGAGGACATGCTGAAGCCTCTGGCTTTTCCCAGTAGAGC----CAGGAACCATGTGGCATCCCCCAGGAGAGCAGAGAGCATTGACCATACCTTCTATGAAAACAGACTCAGCAT---TCGAGGATGTGAGTGACAGAGAGTCG----TCTGC-CGTCTGCTTCAACTTTAAAAACACGGAGTCAGCTTCATCCATG---TCTCCAGCAATTGGTCTGAGTGGAGATGA 
s fr1.chrUn       275325442 218 - 349519338 CT-----------------TTCATGGGAACATGTCGCAGCCT---GCTCTTCGTTGTCAGGCATCTTTAAAGCTGTGTTGTGGTTCT-----GCTCTGAGTAAATTA--CACACCGTCTCCAAAGAAAGACTCAGCAGGGACGGAGGACACCGGGGTCAGC-AGTCGCTCCTCTGAGCGGCTGCT--AACTTTGGGAACAT----CCGGCTCCGTCTCTGGACTCTCGCTGAGTCGACTGCAGCAGAGAGGA 

a score=12195
s mm6.chr8_random  15866213  943 +  24571640 AAATGATCACCTTTTTATACAATGTCTTTTGTTTTTA----AAACACCTCAAAGTGTTCTTATCAGGTTCTCTTAGAATAATGTAGCACATAGGGAAAAAGATACACCCTAGCAACCCTGCACTGGAGGCCAAGATAGAGAAGACCTCCACAGCC----ACCATGGCCTTGGTGCTCTGGTAGA--CAGGGGCAAAGGTGACCCAGACACTGCAGAACAGCACCATGCTGAATGTCAGGAACTTGGCTTCATTGAATGTGTCAGGAAGGTTCCTTGCCAGGAAAGCCACAGTGAAGCTCCCTAGGGCCAGGGTCCCTAAGTATGCCAGCATGCAATAGAATGCAGTAACTGAGCCCTTGTTGCATAAAATGATGATATGAGCATGTTCAGAGTATGCATCTGTATTAATGTAGGGTGGTGAGGTTGCCAGCCAGATGC---------------------------------------CAGAGATAATAAGT---------------------------------------------------TGGATCAGGACACAGATGGGGATAACAGCATTGTAGGCGCTTAAAACAAACAGCTTTTTCATTGTTCTTCCTGCTTTCAGGGCCCTAAAAGCCAGAATTACAGTTATGGTTTTGGCCAAAACAGTGGAAAGAGCCAATGTGAACACATGTG----CAAATGTTATTTGTTGCAGTATGCAGGAGACTGTGTTTGGGTGGCCAATGAAGAGAAAGGAGCATAGGAAGCAGAGGAGGAGGGAGATCAGCAGGATGTAACTGAGAGTAAGGTTATTGGCCATAATGATGGGTGAGTCTTGATGCTTGGGAAAGATCCCCAAAACTGCAGCTGATCTGACAGAGAAGCCCAGAGCCGTGCAGG----------CCAGAGACATGCCCAGAGGATCCTTAAAGGACAGGAAGGTCAGTGATTTAGGCAGGCAGTGGTTTCTCTTAGGGTTCGGGTATTCTTGAATCATGCAAGTGATACACTTCTGCTGATCTGTTG----AGGGGA----GCAAATTAAGATTTCAT 
s fr1.chrUn       151520078 1047 + 349519338 AAGCAATAATATATCTCTAAAATCTTTCACTTTTTGACATCAAGTGTTTCCTTGTGTTCTTTTCTGACTTCATGAGAATTATATAGCACTTGGGTGCAAAGATGCAGCCCAGCAGTCCGTAACTGGAGGCCAAGATGGCAAAGATTTCCGTGAGCGTGGAGTATTTCCCTGGAGAGCTGATATAAGCTGGGACAAAGGCCACCCAGACTGCACAAAAAATGAGCATGCTGAAGGCGATTAGTCTGGCCTCGTTGAAATTGTCTGGCAGTTTTCTCGCCAGGAAGGCTAGGAGGAAACACATACAGGCCAGAACGCCAATGTATCCCAAAACAAGGGAGAAGGCTATGGTTGAGCCTTCGTCACATAAGAGAATGATGATAGCACTTTCACGTGGCA----TGTACTGTCGTGGGGTGGGAGGAGCAACAACCAGCCACACCGTGCAAATAACAACCTGCAACAAAAGAGGAAATGATCAGAAATGTTACATTCAATACATGCAACCGTAACAATTTGAGACAACTTAAAAGAAGCCCTTACCTGGACCAGTGTGCTGAAAGTGATAATTGCCTTTTGCTTCCCTGGTCCGAACCATTTCATCACATCACTACCAGGAAGTGTGGCTCTGAACGCCATTAAGACCACAATTGTCTTCCCCAGAAT----GCACGAGATGCAGAGGACAAACGTGATCCCGAAGGCTGTGTGTCGCAGCATGCAGGACCACTGGGAGGGTGGGCTGATGAAGGTCAGAGAGCACAGGAAGCACAGAGTCAGAGAGAAGAGGAGCAGGAAGCTCAGGTCAGAGTTGTTGGCTCTGACGATGGGGGAGGTCCTGTGATAG---AAGAATACGAGGGCCACGGC-------GCAGGTAAGGAAGGAGCCGATCAGGGAAACAACCAACAGAGCAATGCCTATTGTGTCACCGAAGGAGAGGAACTCCACTTGTTTGGGGACACAGGCTGTCCTGTCAGCATTGGACCAGAACTCCGGCAGGCAGCGGGCACATTCTATGGCATCTGCAGAAAAAGAGGAAAACGTAAAGGAACATTTTAT 

a score=8033
s mm6.chr8_random  16974880 283 +  24571640 CTGGAGTACTGGGATGTTCTGGAGTACTGGGATGTTCTGGAGTACTGGGATGTTCTAGAGAACTGGGATGTTCTGGAGTACTGGGATGTTCTGGAGTACTGGGATGTTCTGGAGTACTGGGATGTTCTAGAGAACTGGGATGTTCTGGAGTACTGGGATGTTCTGGAGTACTGGGATGTTCTGGAGTACTGGGATGTTCTAGAGAACTGGGATGTTCTGGAGTACTGGGATGTTCTGGAGTGCTGGGATGTTCTGGAGTACTGGGATGTTCTGGAGTACTGGG 
s fr1.chrUn       190524673 282 + 349519338 CTGGAAAACCGGGAGGACCTGGAACACCTGGAGGACATGGAAAACCTGGAGGGCCTGG-TAACGTGGAGGATCTGGAACACCCGGAGGATCTGGAAAACCGGGAGGACCTGGAACACCTGGAGGACATGGAAAACCTGGAGGATCTGGAACACCTGGAGGACATGGAAAACCGGGAGGGCCTGGAAAACGTGGAGGACCTGGAACACCTGGAGGACATGGAAAACGTGGAGGATCTGGAACACCCGGAGGACCTGGAAAACCTGGATGACCTGGAAAACCTGG 

a score=1622
s mm6.chr8_random 16975163 126 +  24571640 ATGTTCTGGAGTGCTGGGCTGTTTTGGAGTACTGGGATTTTCAGGAGTACTAGAATGTTCTGGAGTACTGGGATGTTCTGGAGTGCTGGGCTGTTTTGGAGTACTGGGATTTTCAGGAGTACTAGA 
s fr1.chrUn       34873707 108 - 349519338 AGCTTGGAGAGTTCCAGGAGCTGCTGGAGTACCAAGAGCTCCGGGAG---------ATACAGGAGTACCGAGAGCTCCAAGAGTTCTG---------AGAGCTCTGATAGTTCCAGGAGCTGTGGT 

a score=1843
s mm6.chr8_random  16975289 526 +  24571640 ATGTTCTGGAGTACTGGGATGTTCTAGAGAACTGGGATGTTCTGGAGTACTGGGATGTTCTGGAGTACTGGGATGTTCTGGAGTGCTGGGATGTTCTGGAGTGCTGGGATGTTCTGGAGTGCTGGGATGTTCTGGAGTGCTGGGATGTTCTGGAGTGCTGGGATGTTCTGGAG-------TGCTGGGATGTTCTGGAGTGCTGGGATGTTCTGGAGTGCTGGGATGTTCTGGAGTGCTGGGATGTTCTAGAGTACTG-GGATTTTCAGGAGTACTAGAATGTTCTGGAGTACTGGGATGTTCTGGAACACTGGGATGTTATGAAGTCTTCAGCTTC--TTAACCAATTGAAAACATTCTTCTTTCTTCCC--------TCCCATGTCTGCTCAGTTAATAATTTGAAAAAGGGAAAAGAAAATTGTGGGGtgtttttgcttttgttttggttttgtttttttcctc----------tttttcttGAGCCCGTCTTTGTCCCCCTAGGTTTAACCACAAAGGAGAAGGAATAGTTGGGAGAGATGGGCAAGGTCT 
s fr1.chrUn       190524955 472 + 349519338 AGGATCTGGAACACTTGGAGGACCTGGAAAACCGGGAGGACCTGGAACACCTGGATGACATGGAAAACCTGGAGGATCTGGAAAACTTGGAGGACCTGAAACACCAAGAGGACCTGGAAAAC---------CTGGAAAACCTGGAGGACCTGTAACACCTGGATGACCTGGAAAAATGGTCGCCGTGATGTCCTG-----------------------------------------------------ACATTGTTGTGGCAACACGGTCGGACCGTCGTGCTTGAGAG-ACCCGGCTCCTCTGGGTCACTG----------------TCGGTTTCCTCTCACCAAAACAGGTCATGGCTTCTGAACCCCAGCCCGTGTCCCATATTCACACATGGAGCCTTCCGAAGCCCACGGTGGGGAATTGGGAGTCACTCTCCAGTTCTTTAGGGTTCAATGTGGCTCCACCACTGAAATGTGTCATCCGATCATTTCCATGTTTTCCTTAATTCAACCACAATCTAAA---AATAGCAAGAAGAGCCGACTAGGTTCT 

a score=3854
s mm6.chr8_random 17780695 195 +  24571640 tcagcacccaaattaagaag-ctcaATGTGGGGGTGACCTCTTACTGCGTTCTCACGGCTCTTTCTGTTTGTGAGACCTGTGGCTCGACCCTGCTGATAGC-AAGATGTCTTCAGGAAATGCAAAAATTGGGTATCCTGCTCCCAACTTCATAGCTACAGCTGTTATGCCAGATGGACAATTCAAAGATATCAGCCT 
s fr1.chrUn       45726468 181 + 349519338 TCAGTAATCCCATCATGAAGACACAATGCAGAATTG--CTATTTCTG-ATTTTGGAACCATTTCCTCTTTGTGTGATCTGT-------------TTAGAGTGAAAATGGCTGCAGGCAAAGCTCAAATTGGAAAATTGGCCCCAGACTTTACGGCCAAAGCCGTGATGCCAGATGGACAGTTCCAGGACCTGAAACT 

a score=9828
s mm6.chr8_random 17780897 285 +  24571640 TACAAAGGAAAATATGTTGTGTTCTTCTTTTACCCTCTTGACTTTACTTTTGTGTGTCCCACGGAGATCATTGCTTTCAGTGACAGAGCAGATGAATTTAAGAAACTCAACTGCCAAGTGATTGGAGCTTCTGTGGATTCTCACTTCTGTCATCTGGCAT--------------------------------------------------------------------------GGATTAACACACCCAAGAAACAAGGAGGATTGGGACCCATGAACATTCCCTTAATATCAGATCCCAAGTGCACCATTGCTCAGAATTATGGAGTCTTAAAGGCTGATGAAGGTATCTCTTTCAGG 
s fr1.chrUn       45726783 359 + 349519338 TATGCAGGAAAATATGTGGTCTTTTTCTTCTACCCGCTGGACTTCACCTTTGTCTGCCCCACTGAAATAATCGCCTTCAGTGATGCTGCTGAGGATTTCAGGAAAATTGGCTGCGAGGTAATCGCAGCCTCCGTTGACTCGCACTTCTCCCATTTTGCCTGGTAGGTATATTTGACACCTACATTTAAATTTGATATTTTTTGTTGCAAACTCACTTTCTCTTATGTTTCTGAAGGACCAACACACCACGTAAGCAGGGCGGTCTGGGGAGCATGAAAATTCCCCTTGTATCAGACACACGGCGCACAATCTCCACAGACTACGGAGTCCTGAAGGAAGATGAAGGCATCGCCTACAGG 

a score=6361
s mm6.chr8_random 17781182 130 +  24571640 GGCCTTTTTATTATTGATGATAAAGGTATCCTTTCGACAGATAACAATAAATGATCTTCCCGTTGGCCGCTCTGTGGATGAGATTATACGACTAGTCCAGGCCTTCCAGTTCACTGACAAACATGGTGAA 
s fr1.chrUn       45727291 129 + 349519338 GGTCTGTTCATTATCGACCCCAAGGGTATCCTG-AGACAGATCACCATAAATGACCTCCCAGTGGGACGCTCTGTTGAGGAGACCCTGCGTCTTGTCCAAGCCTTTCAGTTCACAGACAAGCACGGAGAA 

a score=4904
s mm6.chr8_random 17781312 80 +  24571640 GTGTGCCCAGCTGGCTGGAAACCTGGCAGTGATACCATCAAACCTGATGTCAATAAGAGCAAAGAGTATTTCTCTAAGCA 
s fr1.chrUn       45727773 80 + 349519338 GTTTGTCCCGCCGGCTGGAAGCCAGGAAGTGACACCATCAAGCCCGACGTCCAGAAGAGCAAAGAATTCTTCTCCAAGCA 

a score=-930
s mm6.chr8_random  17781392 221 +  24571640 GAAGTGAGCA--CTGGACCATTTTTCTGCCAGGCAGCATTGAGCAGCCAGAAGAAACTCTTGTACTCTACTCATGCTTAAACACATGATGTGGTGTGATTC---TAGATAAGCCTTTCCTACAGGGCTGGGGA-----TGGATAGCCTTTCTTCCACTATTGGTTATGGTCTGAGCTGTGTTTTGGGCAGACCATCTTCTATCAGTCACAGAAAACAAC-CTGTTAATTCTT 
s fr1.chrUn       243343976 215 - 349519338 AAACTGAAGAGGATGAAGAGTTTTACCACCTTCCTGACTCCGG-------------CTCTTGCCTTCATGCAAGAGGTGTTCACGTGAAGCAGTATCGTCCAATCAAACATGTTAAACCCATTGATTTCAGTATTTTCTAGATAAAACCTGTGTTGCTATTCACTGTATTTTCATCTG---GTTGGGCAG-CCCCATAGTCTCAAGCACTGAAAGCTACACTGTTACTTTTT 

a score=1752
s mm6.chr8_random 17782861 74 +  24571640 GATGAGGGCATCACCTACTGAGACAGGGCAAACGTGATAATGAGGTTTCTCCACTTGTCCTTATAAATCTACTT 
s fr1.chrUn       45728617 74 + 349519338 GATAAGTGCGCCATCGTGTGTGGCTGCAGAGTCATGACAATAAGGGTTCTCCATCTGCTTCACTACCTTTATTT 

a score=8490
s mm6.chr8_random  19143560 537 +  24571640 CTTCTCTTCCTCAGGTGTTTGGTTAATTTTTGCCAAGTGTGGAGCTGCTTTGCGGGGGCTACTGCCCTTTCTGTTCACAGACCAGTCAGACACGTGTCAAGCACTGTTTAAGCGTGGCTTTTATTGTTATTATTTTGTTTGGCCGTTTGT-GCAGACAAAATTGGACA----GAGTCC-TTGACCAGCTGTTTCGTTTTTCCTTCTTGTCTCCAGTTTGCCCAACCATCTGTAAGTCACATGGCTGCACAGCTGAAGGCCTGTGCTGCCACAAAGAGTGCCTGGGCAACTGTTCGGAACCTGATGACCCCACCAAGTGTGTGGCCTGTCGCAACTTCTATCTGGATGGTCAGTGTGTGGAGACCTGCCCGCCACCCTACTATCACTTCCAGGACTGGCGCTGTGTGAACTTCAGCTTCTGCCAAGACCTTCACTTCAAATGCAGG---------AACTCTCGGAAGCCTGGCTGCCACCAATACGTCATTCACAACAATAAGTGCATCCCCGAGTGCCCGTCTGGCTATACCA---TGAATTCCAGCAAGTAAGT 
s fr1.chrUn       330975462 539 - 349519338 CTTTTCTTTTCCCTGTACTCGCATCTCTTTCGTC-----TGTTTTTGGCTCCCTGGTGCTTTTGTTTGCTGTGACTATTGGACATTTAGTCAGCAGTTATGGTCTGTCTGACCACAG--------GGAATGAATTTGAT--GCTTCTTATAGGAAACAAGCCTGCTCACTCTGAGTTAAGTAACCTTCTTTTTC-TTGTCCCCTCTGCCCCTCAGTGTGCCCTGTCCAGTGCAAACATCAAGCCTGCACCAAGGATGACCAGTGCTGCCACGAGCAGTGCCTGGGCGGGTGCCTGCAGCCTGGCTCAGCCAGCCACTGCGTTGCCTGTCGAGGCCTCCAGTACAAAGGGACCTGCGTGGAGAAGTGTCCCAGAAACTTCTTCACCTACAAAGGCTGGCGCTGCGTCTCTTTCTCATTCTGCTACGACCTGCACAACAAATGCAAGCGGGAGAAAGAGCGCAGGAACGCCGAGTGCCACGAGTACGTCATCCACAAAGGCGCCTGCATCCCCGAGTGCCCCTCTGGCTACACCACCGTCAACTCATTCACGTAAGT 

a score=7676
s mm6.chr8_random  19150652 195 +  24571640 GTGCACCTCATTGATCTCTTTGCCTGTGCTCCACTCTCAGCTTGATGTGCACCCCATGTCTGGGACCCTGCCCTAAGGTCTGCCAAATCCTCGAAGGTGAGAAGACCATTGATTCTGTGACATCTGCCCAGGAGCTCCGAGGCTGCACTGTGATCAACGGTAGCCTGATCATCAACATCCGAGGGGGCAGTGAGT 
s fr1.chrUn       330977983 180 - 349519338 GTGCACAATGTT--TCTTTTTCCCTTTGCTCTAC----AGGCTCAACTGCACTCCCTGTGCGGGACTCTGTCCCAAGGTCTGC---------ATGGGTCTGAAAATGGTGGACTCTGTCACAGCTGCCCAGGATCTGAGAGGCTGCACTGTTCTCAACGGCAGCCTGGTTATCAACCTGCGAGGAGGAAGTGAGT 

a score=6717
s mm6.chr8_random  19152431 179 +  24571640 TGCAGACAACCTGGCAGCTGAGCTGGAGGCTAACCTTGGCCTCATTGAAGAAATTTCGGGATTTCTAAAGATCCGCCGCTCCTATGCTCTGGTATCACTTTCTTTCTTCAGGAAGCTACATCTGATTCGAGGAGAGACCTTGGAAATTGGGTATGTGAGCCTGTGTTTGAGACTGCCAA 
s fr1.chrUn       330978717 179 - 349519338 TGCAGACAACATAGCAGCTGAACTGGAGGCCAGCCTGGGCCAGTTGGAGGAGATCACTGGCTACCTGACAGTGCGGCGTTCCTACGCCCTCGTCTCCCTCTCCTTTTTCCGCAAACTTCGTCTCATTCGCGGAGAGGAGCAGGAAATTGGGTGAGTGTCGCTCTCTTGAAGCCAACTGA 

a score=583
s mm6.chr8_random  19359468 316 +  24571640 gagtgctcagatgctctctacc-ttatctgtttgag-acagggtctctccgtggtgtg-----gaactcactgctggccag--------------tcagtgagacccagggatctgcctgtgtccagctccccagggctg-agatggcaagtaagctatcatacccagatattttcctaaatatggttctcaagattagccccag-atactgatatttgcaaagcaaatagtttaccaacAGTCT-TTCTACCAAAATCATAAAAA-GGTCTGTGATAAATACACTCTTGAAAAAGACCTTAGGGTAGACCTCATGATGCAAGAAGATCCCAGAACCATCT 
s fr1.chrUn       259925543 331 + 349519338 GAGGGCTCTGCCGGCCTCCACAGCCATCCAGTCGATCGCAAAGTCCATCTGTCGGACGAAAGCGGACATACGGATGGCCACGGTGTGAGCTGTTCTCAGCACAACACTGGGCTGCTCCCTCATGATCCTACAGGGGGCAGCATAGAGCAGAGGAAACAACATAATGTCTTAGTTTT----ATATTGTTTTTGAGTTGACTTTTAATATATTGACTCTT------TAAATTGTCAAAGAACAATAGATTCTACCATTATAATAGCGACTGCATGTGATAAATACACTCACTCGTAAAAATCTGACTTTGACATCTTGAGGTAAGTACAGTCTCGAACAGCCT 

a score=6999
s mm6.chr8_random  19361573 800 +  24571640 AGACAATCAGTATGTTTCAAGAACTTAGAAATGCAAAAACTCCGGTGTGAGCTGACCCGTCTCATACCCAATACACTCAGAGTCTGCCTTACTTCTTGGCAATGTTAAGCATCTTCAGTTTCTTCTTCATGCGGGGCCGGGAAGTGGTGGAGACTGATGTGTCCACCAGGGAAGAAGTGGACTGTGACACCTGGGAGAATTTAGAATATTGAGTCAATTGGAGGGAGAGGAAGGAGAGCTCTAAGGAGATCTAAGAAGGCAGAGAGGGTCACTAACGTGTAAATAGGAAAGGGCTGGGCTGCTGTGGTCAGCCAGACCAGC--AGTAGGTCTTGGAACTCACCTTCCGCATAATCTTCCGGCCATAGAAAAGCACTTTGTCCCGCTTCCGGAACCGATACCGGGGACCCTCCGGGGCTGGAGTTTCTGGGG--ATTGGGGACGGGGAAGGGGGTGGAGGGAAGATGGT-GCTTTGAGCTCCACGCAGGCTTCAACAAATCCCCACCCCAGCCGCTTGGTTTCTCCAGGTTTTG-CAGCTTCCCCTCCATCCCTATAGTATTCCCTCAAAGGTTCCCCCCGAATCCTCACTCTGCACCCGCAGCCTTCGCACCACCAAGAGGATGAGCACGGCGGTGACCAGCACCGCCACTCCGGCCCCGATCATCACGCCCAGCACCTGCGG----AACGAACGGCACAGGCTGGGCAACGCATATCCGTCTCCCCAAGCCCTC------CTCCAGGGTCTTTTGAATCACCTCTGCCCCGGAGGAGGTTGTATTCAGTTCGTGACTCGGTGTCCCCATCTGCAG 
s fr1.chrUn       259929775 644 + 349519338 AAAGAATCAGT----TAAAGGAAACGAGTAATTCAAA---------GTAAACTG----GTGGCAAAGCCAACGTTCACA--------TTTACTTTTTGGCAATGTTATGCATCATCTGCCTCTTCTTCGAGCTTGGCCG---AGTGGACGAG---GACGTGCCCACCAGGGACAAGGTGGACTGGGAGACCTGGGGAGACACGG--TGTTCAGTCAAC-----------------------------------------------AAGTTATTGCAGCTGAAACGGGACCAGA-----------TGTTCTGCCAAAAAAACTTGTTCTGGCTGGGAACTCACTTTCCGCATGATCTTCCTGCCGTAGAACATGACCTTGTCCCTTTTGCGAAAGCGGTATTTTGGCGCCTCCTTAGC------TTCTAGGGCTATT--------AAAATAAATCAAATCAAACATGGTAGCGCTGA----TAGACGGGCCT----GTATTTCCTCTCTGGGCACCGAG-----ACAGATGATATCAGCTTT-----------------------------------------TACTCACTCCGGAGCTGAATCCTCCGCAAGATGAAGAAGATGAGGATGGCTATCAGCACTATAGCAATGCCGGCACCGATCACCATCCCGACCATCTGAAGAGAAAACAAACAAATCAAGCTGGAGCACTCAAATTCCACACACCGTACCCTCAAAAATCCCTGGAATGTTTTCTCTTTTCATTGCC-------AGTTTTGATTCA------AACGCACCATGCTTGTCTGCAG 

a score=2827
s mm6.chr8_random  19364405 103 +  24571640 ACCTTCCACAGCAGCAGAAAAGGCTACAAGCTGAGCCACTGCCACGACGGAACTTGCCAGATGTGGGGCTATCCTGGCACTGCTCGATGTAGGCCTGGAGCTC 
s fr1.chrUn       232663267 103 + 349519338 ACCTGTCACAGCAGCAGAAGAAGGAGCACGGAGAGGTCTCCATAGCACGGAACTTCCCAGAGCTGGGAGCGTCCGTGCACTCTGCTATAAAGGCGTGTAGGTC 

a score=12258
s mm6.chr8_random  19366383 295 +  24571640 GGGCTGAAAATGTTC--AGGGGAGGGGAAGGGGAAGCCAGGACTCCCAGGGAGGAGATGGTAGAGATGGCTGACCTTGATGGTGTCATAGGCGCCGGTGATGAGTGCAATGAAGAGGCTCAGCACCATGTAGATGAAGAGGCTGATGAAGGAGTAGAGGTACAGCTGGGAGAAGAGCCACACCAGGCTGCTGTGACCCTGCTGGGCCTGCATGGCCGCGAACGTCACAAACATGTCGTCTCCGTTGATGAGTGAGAACAGACACTCAGAAACCATGGACAGCGAGCGGAACTGTAGG 
s fr1.chrUn       232663409 283 + 349519338 GGGCAAAAAAGGCTCTTATGGTCAAAAACATGGAAAC----ACAACCAGGTTTGAGCCAGAAGCCTTTTCT-ACCTTGATGGTCTCGTAGGCTCCCGTGATGAGGGCGATGAAGAGTGACAGCACCATGTAGATGAAGAGGGAGATGAAGGTGTACAGGTACACTTGACTGAAGAGCCACACCAGCGTGCTGCTCTCCTGC--AGCCCG-------GAGAATGTCACGAACATGTCGTCGCCATTGATGAGGGAGAACAGACACTCCGACACCATGGACAGAGAGCGGAACTGAGGG 

a score=7957
s mm6.chr8_random  19367508 224 +  24571640 ACCTTCACATGGTAGGGCCCTAGAACGATCCAGCCACAGAAGCAATAGCCCAGGTAGATGACAGCCACACAGCAGCAGAAACGCATGACACTGGGCAGTGCCACTCGCAACGTGGCAATCAAGATCTGC----AGAAGGGCAAGGGGACCACAATGAAAGCAATGGCCACAAACCAACTAGCTCTCAGATGGCAGGGAAGGCCTCACCAATGTGGTCAGAAGGGCTGC 
s fr1.chrUn       232663753 213 + 349519338 ACCTTGACGTGGTACGGTCCCAGGACGATCCAGCCACAGAAGCAGTAGCCCAGATAAATGACGGCCACGCAGCAGCAGAACCGAATGACGTTAGGAAAAGCTGCTCGGAGAGTCACAATCAGGATCTGTGGGAAGAGGCGAGAGTGGACC------AAAGCAGATGTT----AGCACCTGGCGATC---TGTGAGGGAACGCAGTGCTGA--CAGTCAAGCGGTCTGC 

a score=9007
s mm6.chr8_random  19368398 341 +  24571640 CACTCACGTTGTACTTGTGGAAAAATGTCAGGTAGCGAATGACACCGACCCAGACTAGCAGAGTGGAGGTACCCAAGAGAATACTGCAGACATCATAGCTGGCTAGGTTCTGTGGGCAGAAGCAAGGAGTCAACCCATGG--GCTGTACTCTCTACCTGGAGG---GGAGGTGGACCCCAAGCAGGCCTGGAGACAGAGA-----CACTGGGTCCTGAGAACAGGCACTGATAGGACT--------------------------------CACACCTTTGCCTCAATGCCAATCTTCATGACAGTCCCCGAGATGGTGAGCACGTCACTGGTGACCAGCAGGATGTACCAGCCATTGACAAACTCCAGCCGTT---CCCAGAGGCT 
s fr1.chrUn       232664140 379 + 349519338 CACTTACATTGTACTTCTGGAAGAATGTGAGGTAACGGATGACCCCCACCCACACCAGGAGTGTGGAGGTCCCCAACAGGATGCCACACAGGTCATATGAGGACATATTCTGTCAGGAAGGAAAGAACGTTACTCGACGGTGACTCTGCATGACAACTACAGATTTAATGATTGACTCC-------TCAGTTGACAAATATCATGCAAAGGCTTCTGGTATTCAGTTATTATAGGACAGAAACTTTCAAATATATCATTATTTGAGGTGACACACCTTTGATTCAATGCCAATTTTGATGATGCTGCCAGTTATGGTGAGGATGTCACTGATGATGAGGAGGATGTACCAGCCATTAATAAACTCGAACCGGTCGGCCCAGACACT 

a score=476
s mm6.chr8_random  19368739 283 +  24571640 GATTTCCCGACCCCGCCGCCGCCACATGAATACAACAAACTCCTATGGGAG-AAGCCCAG--GTGAGGGTCT--GTCTAGAAACCCCTAGGTCATCAC-------------------------CCCCACCATGGCCCC-------AGGGCTGGGCAAGGCGG------GCACC-----------------AGCGCTCGTG---------ACAAC--AGGGCCTCACGTTCTGCAGCAGGAAGCCACGGAGCAGTGAGCGGGCGCACAGCAGGAAGGACAGGGAGCAGGTGAGGATAACCACCACATCAAACAGAAGCCGGAAGCTGTTGTCTCCTACAGGAAACGGGAGACAGC 
s fr1.chrUn       114119045 347 - 349519338 GCTTTATGGAAGTGTGCGTGG----AAGAATACGCCGAACTCCTGCGTGAGTAAAGCCAGTCGTGCGCGTTTTAATATTGAACGAAAAAGATTTTCATACGAGCGTGTCTCAAACATGTCGTGCCACATCATTTAGCCATAAAAAATGGATTGTAAAGGTGATGAATTGCACTGATTGCATACAAATTCAAGCACTCATGTGTTGGGTTATAATCAGGGAACTCACAAACTGCAGCTGGATGCCGGTGATGACGGATCGCACGCAGAGGACGAAGGAAGTGAAGCAGACGAGGATGACCGCAGAGTCAAGCAGCAGC---AGCCGGTAGTCAATTTTATCAGCTGAGAAACCGC 

a score=4699
s mm6.chr8_random  19370038 160 +  24571640 GGACTAATCTGGGGGTAATAGGGGGGTCTGAGGATGGGAGAGTTTACCATGTCTGGAGACACTGGGGTGTTTGCACTCCTGGATGTGGGTCTTGGTCTCCAGGCGGATGGGGATTCGCCCACTGTGCGCTTTATTGTCAAATGTGATCTGAAGGGTAGAG 
s fr1.chrUn       232664658 160 + 349519338 ggatggatgatgggtggatggagggatggatgggtggaGGGCCTCACCTTGTCCAGAGACACTCGGGTCTTTACACTCTTTGATGGTCGCCCGGGTTTCTAACCTGATCTTCACCTTCCCACTATGAGCTTTGTTGTCCATGATTATCTGGAAGACAAAG 

a score=5774
s mm6.chr8_random  19370517 217 +  24571640 CAGAGGATCACCCAGTTGCTCACCAGGATACTGAAGGTGTAACAATCAGGGATCTCATTGTTGATGAGGCTCTGCAGGTTAATTGTCTTCAGCTGGAAGTGGATGGTGACGTTGATCAGCCTATTGGGGGAGGCTTGGGTGAGGGGCAGGGGCCCAGTGTCAGTCACTCCTATCCCATGCTGACTCTGCAGCTAGCAGAGGAAACTGCTCACTCAGC 
s fr1.chrUn       232665320 206 + 349519338 cagacagacacaGAGTTGCTCACCGTTATATAAAAAGTGTAGCAGTCTGGAATCTCACTGTTGATGATTGTCTGTAAATTGATGGCCTTCAGCTGGAAATCTATGGTAATGTTAATGAACCTGTAGAGAGAAAATGGGTTATTAACCGAGATGTCAAGCACAGTCGTCTGTGTTC---GCGGACTGAACCACGAGCGCAGG--------CGCTCAGC 

a score=2340
s mm6.chr8_random  19370875 51 +  24571640 AAGAGAAAAGGGTAG---TACTTGTGGAATTTCAGTGTGAGGTTCTTGTAACTG 
s fr1.chrUn       232665597 54 + 349519338 AAATGAAAAATGAAGCTTTACTTGTGAAACTTGACTGTAAAGTTCTTGTAGCTG 

a score=5735
s mm6.chr8_random  19580227 178 +  24571640 CAGTGTAAAACTTATCTTCTTTCAGAGCACTGTACCCGAGGAAGTAAGAAGCAGAAGAGCTACCTTTGAAGTTGGGTCTGATTCTTGCATCATACCCCGATGTCCTCCCCATTAGTTTGTCCAGAAAATCAGAAGGTGACATTGGAGCACTTCGAGATCGC---GCACTGTTTGTTTCCTT 
s fr1.chrUn       253153684 181 - 349519338 CATTATTGAGCACAATTACTGGCAGAGTTCAATCATTTAGAAACCAGCGTAGGGGAAAAATACCTTTGAAGTTAGGTCTTATCCTGGCATCATATCCAGATGTTCTGCCCATCAGTTTATCCAGGAAGTCAGATGGAGACATGGGTACCTGCCGCGACCTCGCAGCATTGTCCAGTTCCTT 

a score=999
s mm6.chr8_random  19596424 217 +  24571640 AATTATTCATTTAGCAAAAAATTACTA-AATCCTGGCA--GTCTCCTTAGAACATTTAAAATGAAAAAATTTTAGAGAATGAAAAAAGTTTATAGAAAATATATTCATTTAAATGTAAATGTATATACACATTCATATGTATCGCTAAATAT---CAGCATTCTGTTTTCACAAATGATAGCACTCAGTGTTTGTGCAATTAAGTCAATGAAATTTGAAGAAG 
s fr1.chrUn       176174216 209 + 349519338 AAATATTCTTCATAAAGAAAATTAAAAGAATTATGGCATGATGTCATTAAA---CTGAAAACAGAAAAACAGAAAACAGAAAAAACAGTGTAAAAAAGAAAATTTCATTTTCAGCCTAAAAGATGTGACTATTCATG---------AAATATTTCTGTCATTACTTTTCTTCGACTCATTGGATTT--TATTTCCAAAATTCTACAAACTCATTTTGAAACAG 

a score=4946
s mm6.chr8_random  19597321 78 +  24571640 AAGCCATGTTCAGCTAGAGCGCCAAAATCGTGAAGCCTAATGGCGAGAAGCTGGTCGAGTTCGAGTATGTCATCTCTC 
s fr1.chrUn       176181122 78 + 349519338 AGGCCATGTTCAGTACAAGCGCCAAAATAGTGAAGCCTAATGGCGAAAAGCCAGACGAGTTTGAGTCTGGGATCTCCC 

a score=4136
s mm6.chr8_random  19597399 72 +  24571640 AGGCGCTGCTCAAGCTGGAGATGAACGCAGATCTCAAGGCGCAGCTGCGGGAACTCAACATCACCACAACCA 
s fr1.chrUn       176181657 72 + 349519338 AGGCTCTGCTTGAGTTGGAGATGAACTCTGACCTGAAGGCGCAGTTGAGAGAGCTGAACATCACTGCAGCAA 

a score=7965
s mm6.chr8_random  19597471 186 +  24571640 AGCAAATTGAAGTCGGTG-TGGTCGGAAAGCTATCATAAT-TTTGTACCAGTTCCTCAGCTTAAATCTTTCCAGGAAATCCAAGTCCGGCTAGTTCGTGAATTGGAGAAAAAGTTCAGTGGGAAGCAAGTAGTGTTCATTGCTCAGAGGAGGATTCTGCCCAAGCCAACCCGAAAAAGCCGTACGAAA 
s fr1.chrUn       176182170 183 + 349519338 AGGAAATTGAGGTTGGTGGCAGCAGAAAAGCCATCATCATCTTTGTTCCAGTACCTCAGCTTAAGTCCTTCCAGAAGATTCAAGTGCGCCTGGTGAGGGAGCTGGAGAAGAAGTTCAGCGGAAAGCACGTAGTCTTTATTGCTCAGGTGAGGCTG-----GAGGTTCACTTGGAAAACTTGTACTCAA 

a score=8553
s mm6.chr8_random  19597672 213 +  24571640 CCCAGAAGCCGCACCCTGACAGCAATGCAGGACGCCATCCTTGAGGACTTAGTCTTCCCAAGTGAAATTGTGGGTAAGAGGGTCCGTGTGAAACTGGATGGCAGCCGGCTCCTAAAAGTCCATTTAGACAAAGCACAGCAGAACAACATGGAACACAAGGTCGGAACTTTCTCTGCTGTGTACAAGAAGCTCATAGGCAAGGATGTTAATTTT 
s fr1.chrUn       176183786 209 + 349519338 CCCCTCAGTCGTACACTAACTTCGGTCCACGACGCCATTTTGGAGGACCTGGTGTTCCCCAGTGAGATTGTGGGCAAGAGGATCCGAGTGAAGATGGACAGCAGCAGGCTCATCAAGGTGCACCTGGACAAGGCCCAGCAGAACAACGTGGAACACAAAGTGAGTGGATCTGCTGGTCTACATACG----CCATATGTGACAGCGCTGATTGT 

a score=5196
s mm6.chr8_random  19641768 233 +  24571640 AAATAGTGTTGCCATGATAAATacacacacacacacacacacacacacacacacacacacacacacacacgcacacTTGAAGCTTTCTGGCCAGTTACTCTAGCCAATCAGATTCAGTGAGACAAAAAGTTTGAGAATGATAGAAAACACATTGATCTCTAGCTCCTGTATCCCAGGCAGACATTTGTCATGTGCAACCCTACACACCTGCATACACAGAAGCACACACAGAA 
s fr1.chrUn       157562498 191 - 349519338 AAAAAGCCCTAACCCAacacacacacacacacacacacacacacacacacacacacacacacacacacacacacac----------------acacacacTGTACAAT----GTCAGATGGACAGATAATTGCATGCTAATA-------------TCCATACCATTTGGAACGCTGA---------GGCTTGTGTAAACATACACACAAACATACACAAGAACACACACCTAA 

a score=6952
s mm6.chr8_random 20230946 273 +  24571640 cacacacacacagacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacaTCCCTTAGAGGGCTTTAAAAAAAAAAAATCTGCCAATCATAGTTGCTATCCTCTGTGTGACCA--CTAGAGGGCAGGACTATCCAATGCCTTGTGCT---GTCACAGGGTTGTAATCA-------------CGGTAAAAGAGAAGGG--AAAAATGGATGATGTGGGAATCCCGAAGACTTTACAGGGCCAAGTGTGGCAGAGCTGGGATG 
s fr1.chrUn       68346992 275 + 349519338 cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaGACGCAAATCC----------TTGTCAGCAAAAAAACTTGACAAGAATACAGACAAGACAACAGACAACAGGGATGGAGTGAGAGAGGACCCGA-GTTTGATATTTGAATGAGAGGATGGTGATGGGGGGGGTGGGGGGCGGTCAGTGCGGGGGGCAAAAAAGGGATGAGGTAAGATTCTTGGAGAGGTGACAGGGCAAAG-------ATGCTGGAATG 

a score=5571
s mm6.chr8_random  20930184 355 +  24571640 GGAAGTATAGGCGACACGATATAGATTAGCCTTATGCCACTGTAAACAGATTGATTTGCTTGTGCTACTAGGAAGTA-TGTTTGGAAGTGC-------AAAGTCATCTTCTTCATGATTACATTATTAT-----GTTTAACCT--AAAGAAGAAACAACAG-------AacacacacaccacacacacacacacacacacacacacacacacactcatacatacaTAATATACATCTTCACCTTAATAAAGACAAATGTCCAGATAGTGATTATTGAAGATAAGGCTTGT-------AAGAGCTCTTCAACAAACCTTAATGCCCCCAGTCGGGATTGCACTTTGACATATAAGCTATCACAAAGCATCTGGCGTATTTAAAAA 
s fr1.chrUn       340302834 366 - 349519338 GAAAGTCAGGGCCACATGGTAAAGTGTGACCTT---------TAAGCAGGAATATTCACCTGTTTGAGCAAACAGCCCTGTTTCACAATGTTTCCTCTGAATTCTTC--CTTCACCAGCACGTCATCATCGCTTGAGTAACCTTCACAGAAGAATCCACTATCGGCCTGacacacacac-acacacacacacacacacacacacacacacacacacacacacacaca-cacacacacacacacaGTCAGAGCTGAGAG----GATGGTGGTTTGTGACCA-AAGTTTTGTGTCACCAAATGCCTCTCTGACAAGTTTCCACAGCAGTAGTTTTGGTTTCTCATCGACTTACAAAGTAATACAGAGCATTTGTTTCATCTAAAAA 

a score=1851
s mm6.chr8_random 22981701 112 +  24571640 AATAGAGATGATTAATGAAGCCTATGTTGCAGCTATTAA---GTAAGGGGTTCAAAAGAAAAAAAAAAACTATGGAAGAATTAAGACAACAAGAGAACTCCTAAAGAGAAAATAC 
s fr1.chrUn       51009750 112 + 349519338 AACAGCAAGCACTTTTGATGCCTTTCTTATATTTATGAAAAAGAAAAACTTGGAAAAGAAAATAAAACACTGTGGAAGCACTCAAGCATTAGTCGG---CTTAAGGTTAAAACAC 

a score=5184
s mm6.chr8_random 22988929 264 +  24571640 AATAAGAAAGTGGGAGTGGTCAGGATAGTAAGAGAGAA-------ATCTAAACAGAAtcttcctctctttctctctctctctctctctctctctctctctctctctctctATCCCTTCTCACCCTTCAAGCAATTTTTCCAAAATATATATGAATGAACTACAGTGTAGTGCAAAAAAAGACACAATGTTTTAGCAGAGAGCATTATGCTTGAAATCATTTCTTTCCTTACTTTGGCAAAGTTTCCTTGAGTGTTGATTTTGGATTTGGCC 
s fr1.chrUn       51017339 248 + 349519338 AATGAGGCAGGGAGGCCAGGTGGAACAGCCAAAACAAATCCGATTATCCGGGAAAGGCTtctctctctctctctctctctctctctctctctctctctctctctccgtctctctcATTCTGTCTTTTGTGGAATCATCTCCCAACCCCTCCTCAGAAAATACAG------------------ACAGTTGTTTGTGGTGGTGCTTTATGCTCCAAATCCTTTCTTTCGCCTCTTTTGCACAGGTT-----GTTGCAGCTTTTCAATATGACC 

a score=1122
s mm6.chr8_random  22991397 236 +  24571640 AATATTTTAAGTCTTTTGTTATTTACTTATAAAATGTCCAAGATAATATGTCAGGTTTGTGTTGTCTTATAT-----------CATACCTGCTTTT------GAATTCTGTCTATAGGTGAAAAATAAATTTCTTGTGGGACATTGTCTCTATTACAAGAATGAGTCATATAATATGAATGCATGTGTATATAATATAATTGAACTCATGACTGAAAATTTCTTCTTTC----ATTGAAATCCTGATGAAAAAAATG 
s fr1.chrUn       253144507 227 - 349519338 AATATATTTAGCTTTTTTTTTTATAACACACAGATGTCCAAAATACTGCAATAGCTTGGTGTACTGTCATCTACAGGTTCATGCACACATGTATTTTGCAGCAGATTTGGTCTACAAATT---------CTTATAATGTGATTTTTGCTCATTTTT--GAATGA-----ATACAATAAAAGCATTTTTACAAAA--------AAATCTTGGACAAAAACAACATTTTTCCAGTGTTGA------GATGAGCAAAACG 

a score=-140
s mm6.chr8_random  22993147 61 +  24571640 AATTTTGACCAATCTGACAACAGCATTTAATGTATGCATCCAATGCGTGTCCCCTCAGGAT 
s fr1.chrUn       278806314 51 - 349519338 ACTTCTAGAAAACATTAAACCAGCCATAAATTCATGAAACGGA---GTGTCC-------AC 

a score=13807
s mm6.chr8_random  22993208 223 +  24571640 GCTTACCTTTGGTAAGGAGGCCCGGGATCCAGAACTCTGTGTGGTCATAGTAAGTACAGTGGTGATGCCCAAAGCTACTCTAGCTGGGGCTGCATCCATGTTAATCCAGAATGAGACCCAGGATAGAATAACGATCAGGAGGCTGGGGATGTACATCTGGATCAAGTAATAGCCCATCTGACGCTCAAGATGGAATCGCACTTCTATGCATGTAAACTTTCCT 
s fr1.chrUn       253146093 223 - 349519338 GCCGACCTTTGGCAGCGATGTCCTGGAGCCGGAACTCTGCGTCGTCATGGTGAGGACCGTGGTGATCCCCAGTGCCACTCTGGCAGGAGCGGCGTCCATGTTTATCCAGAAAGAGACCCAGGACAGGATAACAATGAGCAGAGAGGGGATGTACATCTGGATCAAGTAGTAGCCCATCTGACGCTCCAGGTGGAACCGCACCTCAATGCAAGTAAATTTACCT 

a score=7813
s mm6.chr8_random  22997154 158 +  24571640 GTCCTTACCTGTATTGTAGTGTTTAGTGCAGTACCGCAAGTCCTTTTCTTCTTTCAACAGAAATTGAGGCAAAGTGAGTCCTTCAGCCACTTGTACTGGGGCTTCATCTTGCCATTCAAAAATGAGATCATTCATTGTGTACCCAACTGGATAAAATA 
s fr1.chrUn       253146444 158 - 349519338 GTTTTTACCTGTATTGTAGTGCTTGGTGCAGTATCTGAGGTCCGATTCATCTTTTAGGATAAACTGCGGCAGCGTGAGTCCTTCGGCGACCTGGACCGGTCCGTTTTCCTGCCACTCGAAGATCAGGTCGTTCATGGTGTAACCGACTGAAAAATACA 

a score=59
s mm6.chr8_random  22997318 48 +  24571640 TGTT-TATAGCCACGGGAAGAAGACATG-CAAGT--AGAAAAAAATAGAAAC 
s fr1.chrUn       203009849 52 + 349519338 CGTCGTGAAGCCAAAGCCACAACACGCACCGAGTCCCGACAAAAAGACAAAC 

a score=1026
s mm6.chr8_random  22998905 193 +  24571640 CATACAGAGAATCACAGAAGACAAAAACATTTGAGATACTTCTTGTACCAATTTAGACAGATGAATGAAAAGACAAGACAAGCCCTCTTTTTGTTTTGAAGTGGTAAAGTTTTGTATAAT------CATCT-----CTGAAAAGCAACAAGCTGCTTGAAATTCTGTGGATGTCCTGCTCTGAGTTTTCTCCATTCCATTTTCT 
s fr1.chrUn       253150370 174 - 349519338 CAGACAGAGGAT---GGAGGATTAACTGGATGGAGAGATTTGGTG----------AACAAATGCAATAAAAGAGAGTATAA-----------------CAGTGGTAAATCTCTTTAACACAGATAGCGTGTGCAGCCTGAAGGGAAGCAACCTGCCTCTAAGCCTCCGTGTGTGTGAGTGTGTGTGATTCTCCTTCCATTTTTT 

a score=2101
s mm6.chr8_random  23003786 52 +  24571640 CTCAGAATAACTGAAGAGAAACCTCATACAAATACTTTGATTTTCAACTCCC 
s fr1.chrUn       253150919 52 - 349519338 CTCAGAAAACCTGAAAAGAGACTTTAAATAATTGACTTGATCTCTGTTTCCC 

a score=6078
s mm6.chr8_random  23349576 261 +  24571640 AGAGCATGTGCCTCCGGAGCTGTGGGAACCCTTCTACACCGATCAGTACGCACAGGAGCACGTGAAGCCCCCAGTGACGCGGCTGCTGCTCTCTGCGGAACTATACTGTCGGGCCTGGCGCCAGGCACTGCCACAGCTCGA--------GCCATCCCCCAGTCCCT-CTGCTCTGTTGGCCTTGCT--GGCGAGGAGGGGCACGGTGCCTTCACTGCCTGAGCACC---------CAGTGCGCGAGGCTGACCTGAAACACCAGCCAATTCTCATGGTAGG 
s fr1.chrUn       189945992 270 + 349519338 AGAAAATGTCCCTGCAGAGCTGCGTGACCCCTTCTACTGTGACCAGTATGAGCAGGAGCACCTTAAACCACCAGTCACGCGCCTTCTACAGTCTTCAGAGCTCTACTGTCGTACCTATAGCCTGTTACTGGCACAGCCAGAAACTGGAGAACAACCCAAAGACAATGCTGCCCTAGTGCATCTCCTCAGTCAGAAAGGAG-----------TACTGTCCAAGGATCGGGACATGGCTGTGACTGAGGCAGACCTCCAGCAGAAGCCCATCAAAATGGTAAG 

a score=2430
s mm6.chr8_random  23350400 153 +  24571640 CTTCCAGCCTTTGCC-CCAACAGGGAGCCCACCTAGCTGTCATCGATGCTCTCATGGTTGCCTTCTCATTTGAG--------TGGACAAAG-----ACACTACCTGGTCCCTTGGCTCTGA-------GCAGCTTGGAGCACAAACTCCTTTTCTGGGTAGACACAGTAAGTAG 
s fr1.chrUn       189950845 172 + 349519338 CTTCTGTCCTGTGTTGACTGCAGGGTTCTCACCTGGCAGTGATTGATGCTCTGATGGCTGTGGCAGCAGTAGAGACGGTGGCTGCAGCAAGGACGCACACTTCC--GCCGATCTACTCGGAGGAGGGTGCAGTTGGGAGGATGCTCTGCTTCACTGGGTGAATGCGGTAAGGAG 

a score=3836
s mm6.chr8_random  23350890 178 +  24571640 TTTTCTCTGCACTTTTTATTGCACCGGCCCCTGCTGTCCCCTTCTCTGTCCCTCTGGCAATAGTGCCCCACACGCTGGTACTGGAAGCTGGTTCCTGTAAGTGAGGCTGTCTGTTTTGTCTTGTC-TGCCTGTCCTGCTTGTTTCTGTCTTGTCTGTGTCATTTCTGCTTGATTGCCTG 
s fr1.chrUn       189951777 179 + 349519338 TTGTCCCCCCAGTCTTCATTTCCCTGTCTCTCTATTTCCTTTCCTTTCTTCTTTTTCTGACAGTGTCCTACTCGCTGGTACTGGAAACTTGTTCCTGTAAGTTCCCTCCTCTCCTCTGCCCCCTCTTGTCATTCCTCCATCCCTCAGGTGTCTTCATCACATTTATCAGCAATTATCTG 

a score=104
s mm6.chr8_random  23351068 6 +  24571640 CACACC 
s fr1.chrUn       174278426 6 - 349519338 GATGCC 

a score=4672
s mm6.chr8_random  23352072 84 +  24571640 CGGCCGCTCCTTCCCCC-CCCAGCACGCAATTGCCTTCTGTTTGAAGGAGTCGGGGAACAAACCCCCTATGGTAATGTATCCCCC 
s fr1.chrUn       174278913 85 - 349519338 CTGCCACCCTCCCTCCCATCCAGCATGCTATCGCTTTTTGTTTGAAGGAGTCGGGGAATAAACCGCCAGTGGTAACGTATACCTC 

a score=583
s mm6.chr8_random  23352394 16 +  24571640 CTCTCTTCCTGTCCAC 
s fr1.chrUn       174279689 16 - 349519338 CTGTCTTTTCTTCCAT 

a score=3298
s mm6.chr8_random  23352410 168 +  24571640 AGATTCGATATCGCAAGGACCGTGCCATTGCCCGAAGGGCTCCCTGCTTTCCAAATGTGACTACCCTTCAGGACCTGGCCAGTGGGGCAGCACTGGCTGCCACCATCCACTGCTATTGTCCCCAGCTATTACGACTTGAGGGTGAGTAGTGGATAAGCCAGACCTGAT 
s fr1.chrUn       189952609 167 + 349519338 AGCTTCGCTACCGGAAGGATAAAATGCAGTCCAGACAAAAGCCCTTCTTTCCCGTGGTGAATAAAGTCAAAGACCTGTCCAGTGGCTGTGCCATTGCTGCAGTCATCCATTATTACTGCCCTGGCCTGCTTAGACTTGAAGGT-ATCAGCAAATGAACCTGGTGTGAT 

a score=-211
s mm6.chr8_random  23353499 190 +  24571640 ctctggtctgcagacatgtacacaca-ggtgcacacaTATACAGAGGACAAGAAGAAAACAATTCTTGCGTTA--AGTCTTAGAGGGCCAATACACTGTAGTATGCACCTTACAAAAGGTACACGACTTGGCTCAAAGGAGGGCTTCCCTGGAACTCCCATCTTCTTTTCCATTGAGTTGGAG--------ACCCATATAT 
s fr1.chrUn       184251376 172 - 349519338 CTTCATTCTTTAGGCACATTCACACACAGCGCCCCC-----TAGAGGCCGAAGGTCTCACAACACTTACGTCACTGTTCTTGGACAGCGAGTTCCTT-----------CTTATAGGGCGGTCAGACCTCGGCTTT-----GTGATCAGACAGAAGTCGAACC--------CATTTAGGTGACGTCGCTGCAACCCTTATAT 

a score=5074
s mm6.chr8_random  23353689 155 +  24571640 TCTGTCCCCACA-GAGGTGTGCCTCAAGGACCCCATGTCTGTGGCAGACAGTCTATACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCCCATCTTCCTCGAGGCTGCCCCCTGTCCCTTGAAGACTTGCTGTATGTCCCACCACCCCTCAAGGT 
s fr1.chrUn       189952841 156 + 349519338 TTTGTCTTTACAAGATGTTTGCATGAAGGAGTCCGTGTCTGTAGAAGACAGCCTGTACAACCTGCAGTTCATCCGTGAATTCTGTGACAGCTGTCTGAAGAATTGCTGTCATTTGGCCCTGGAAGACATGCTGTACATTCCACAGGAACTTCAGGT 

a score=-352
s mm6.chr8_random  23353844 358 +  24571640 AAAGCCATCCTGGTGGTGTGGGGGTGAGACTCAGGAC------CTGAGGTCCATATCCAGGGCTGATTTCCCTTTGGCCTGCAGGTCAACCTGGTGGTGCTGTTGGCTGAGATGTATATGTGCTTTGAGGTTCTGAAGCCTGATTTT---------GTGCAGGCCAAAGACTTGCCTGATGGACATGGTGAGCCCTGGGGACCTGGACTTGCCTTGGGGTCTAGAAGAGGGTAAAGGAACCCTGCTCTGCATGACCTTTTTCTTTGTGCACCTAGTAGCTGTCTC----CCCCCGGAATACAGAGACTGTTCCATCTCAGAACAACAGTGGCAGCAGGTATGGGTCCCTGTTGGAGTGGAGTTTCTCCTTCATGGGG 
s fr1.chrUn       174280114 331 - 349519338 AA---------------GCGTGGGCAGTTCTCACGTCAGTTGTTGCAGATTTGCAACCTAACCTGTTTTTTTGCTCCCCT-CAGCTCAACATCATGAGCTTCATCTCCGAGCTGCTGCATTGGTTTGAAGTGAAAAAGCCGGATTTTGTCCAACCCGTACAAGCCACCGACCTCACAGGTG--TGTGAGGGACACCTGGGACACCAAACGGACTTCAGTTCTCTCACGTTGTAGAG------TGTT----AACATCTTTTTCT------ACATCTCAGATGTCTCAGGGTTACTCGACTGTACAA---GTCCCATC----AACGGGAGTGGGAACAGGTAGGACAGTCCATCAGACTG-----TCGCCTTCATAAAG 

a score=1870
s mm6.chr8_random  23355165 82 +  24571640 CAGGCTCCCTGAAGTCCTCTCCATCAATGTCTCACATGGAGGCTCTTGGCAAAGCCTGGAACCGTCAG---CTTAGGTGAGTGCC 
s fr1.chrUn       189953707 85 + 349519338 CAGGATCTTTGACTCAGTCTACCTCAATGTCTCATATAGAAGGAGCTGGACAAACATGGAGCAAAAAGTCTCTCAGGTGGGATTC 

a score=10102
s mm6.chr8_random  23355339 1293 +  24571640 CAGCCGTCCCCTCTCCCAGGCTGTGTCGTTCAGCACTCCCTTTGGCCTGGACAGCGATGTGGATGTCGTCATGGGAGATCCTGTCCTGCTCCGCTCCGTCAGCTCAGACAGTCTGGGTCC----------------------------TCCACGTCCTGTGTCAACATCATCC---------CGGAATTCTGCTCAG-------------------------------CCAGCCCCA-------------------------------------------GAATCTGGAGACCTACCCACGATTGAAGAGGCCCTGCAGATCATTCACAGTG---------CTGAGCCCCGACTGCTCCCTGATGGGGCTGCTGATGGCAGTTTCTACCTCCATTCTCCTGAGGGTC--------TCTCCAAACCACC------ACTCTCCCCCTACCCTCCCGAAGGAGCCTCAAAGCCGCTGTCTGATAGGCTCAACAAGGCGCCTATCTATATA------TCACACCCTGAGAACCCTT---------CAAAATCATCTCCCTGCT----------------------------CAACAGGAGAGATACTGAAACCAC----CACCCCCATCCGAGGGTTCCCCCAAAGCTGTGGCTTCATCCCCAGCAGCCAACAACTCCGAAGTGAAGATGACCAGTTTTGCTGAACGCAAGAAACAGCTGGTGAAGGCT------GAGGCTGAGTCAGGAT----TGGGGTCTCCAACATCCACCC------CCGTAG-------CACCTGAGGCCTTGAGCTCAGAGATGAGT--GAGCTGGGAGCCAGGCTGGAGGAGAAGCGCCGAGCCATAGAGGCACAGAAACGACGCATTGAGGCAATCTTTGCCAAGCATAGGCAGAGGCTGGGCAAGAGCGCTTTCCTGC---------AGGTGCAGCCTCGGGAGGCTGCAGGGGAGGCCGAGGAGGAAGCTGAGCTGGGCTCAGTTCCTGGT-----GGGGAA---------CGGCCAGCAGGTGA---------------------------------GGGCCAGGGTGAGCCGT-CCTTACGGCA------------------------------------------CAAGTCAGTTACTTC----------TCTCCA--------GACCTGGGCCCAGTGCCCCCAGAGGGA------CTTGGGGATTACAATAGAGCAGTCAGTAAGCTGAGTGCCGCTCTGAGCTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCGGCTTTT--------AGCC--------CCTCCAGAAGCTCCTGG---------ACTTGCCCCACCACTTGCAGCCTGGGTCATTCCT-----------------GGACCCGCCACTGGGCTTAAAGCAG------CATCCCCCAGCCCTGCCCGTCGTGCCCCAGC------------------------TGCCCGACGCAGCCCTGGGCCAGGCCCCAGCCCAACACCCCGTAGTCCAAAACATGCAAGGCCGGC----AGAGCTGAAGCTTGCACCTTTGACAAGGGTACTCACACCACCCCATGATGTAGACAGCCTCCCTCACCTACGCAAGTTTTCACCCAGCCAGGTGCCTGTACAGACTCGCTCCTCTATCCTCCTGTCGGAG 
s fr1.chrUn       189953869 1679 + 349519338 CAGCCGCCCATTGTC---AGCCATATCCTTTAGCATTCCTTTTGGCCTGGACAGTGATGTAGACATTGTAATGGGCGACCCAGTGATAACAAGATCTGTGAGCTCTGACCATCTCAACCCAGCAAGCCAAAATACCAATCATATGCATTTCACGCCTCCTGAAGATCTCAGCCATTTAAGGGTCAAATCCCCTTCAGTCAATACTCCACAGAGAGCGTCCTGGACCACCCAGTCACACGGTATTCCAAGGGTAGCAGAGGAAAATGGTCTTGCAGCAAGTGAAACTGGAGAGTTACCTACTATTGAGGAAGCCCTTCAAATTATTCACAATGAGAGCAAGCTGGAACCTCGTTTACACCCCGACGGTGCTCCTGATGGA---TTCTACCTCCATTCTCCCGATGACCCTGCTAGTTCTAGAAATAACTCAAAAAAGTTAGCACCTATCAGCTCCTCTGCCCCTACAAACTCAGGAATGATACATCGACCCATGGGCGATTCCAGGGAACCCACTCGTACCAGGAACACCTCTGAGTGCTCACGAGACGATGACTCTGTTTTGAGAGATGGTAGCGTGGATTCAGATGCTTCAGAAGACATGCCTAAGGCCCAGTCCACCCCGGCTTCAGGTACACGCCCTGTTCGAGGCCACAGTAA-AGAGGCCGACAGC---GGTGTGAGGATGACAAGCTTTGCAGAACGCAAAAAGAAACTGACTGATTCTCCAAAAGCTGTTGACTCTGCTTCTCCTGAGATGACCA-CATGTGGCCAAAAGTCTGAAGAGAGCTCCAGCAATAGCCCTCAACCCAATGACGTGTCAGAACTTGGGGTTCGTCTTGAAGAAAAGCGCAGAGCTATTGAAGCTCAGAAAAAACGCATTGAGGCTATTTTTGCAAAGCACCGACAAAGACTGGGAAAGAGCGCCTTCCGACAGCTGAAAAAGGAGCAGTTTGAGGATGAAGTTGGGGAAGATGGAGGGGATGATATCCTGG--TCAGTACCTCTTCCACAGAGGAAGATCTCTCTCGATTATCACTTGATGACAAGCAAGCTCAGATGGAAGAAGAGCAATGGGATCAATGTGAGCAGCGCCTCTCGGTGGAGGATGACGTTAATGTCAAAGAAGAACTTGAACCAAATAATCAGGGCGGTGACTTTAATGAAAAGGTCTTGAGAGAAAAGGACTCGGGGACAGCTGGTCAGAAAATAGCTCCCCTGGGGGACTATAACAATGCTGTGTCCAAGCTGACTGCAGCTCTTAGTTCCTTGCAAAGTGACATGCAGCGTCTGACGGAGCAGCAGAACCACCTACTCAAGAAGAAGCCTGCTGCTTCGACCAGCAAGTCATGGGTCATTCCTGCTAGCCCCAGAACGTCCACTCCAGCTTCTACCCCTTTACGTATGTCACGAGAGCCCACCAGAAACCTCAATTCGGCCTCTACCTCCCCCTCCCCATCTCACAAAACCGCAGCTCAGACAACTCCTAAATCTCCTCATGTCCAACGCAGAGCCCGGTCTGTCCCC--CCGAAAAGCCCCAAA--CATAACCAGCACAGTCGTCCCATGGATGTTAAGCCCCCAACCTATTCAAGAGTCATAACTGCGCCTCAAAATGTGGATCGCATCCCGCACCTGCGTCGTGTAAATCCCTGGCAGTCTCAAGTCCAGACTTCGTCCTCATTC--ACTATTGGAG 

a score=2577
s mm6.chr8_random  23358000 217 +  24571640 AGGACGAAGACAAGCCTGAGGATGAGATGGCTCAGAAGCGAGCTAGCCTGCTGGAGCGTCAGCAGAGGCGGGTAGAGGAAGCCCGGCGGCGCAAACAGTGGCAGGAGGCAGAGAAGGAGCAGAAACGGGA-----------GGAGGCC--GCCAGGTGAGGCTAGAAC----TGGAATGAGGGGCCTGGCCTTTGGTATTGCTGCCCCAGTGCTCCCATATTC-TATCCTGCTTG 
s fr1.chrUn       189956078 231 + 349519338 AAGATAAGGAGCGACCAGAGGATGAGATGGCGCAACGCAGAGCTGCTTTTTTGGAAAAACAGCAAAAGAGAGCAGAAGAGTTGAAAAGGCGCAAACTTGAGCAGGAAAAAGAGAAAGAATCGAAGTGAGACCCCTGCATGTTAATGTCTAACCAAACGAGCATCAAATATCTTACAGTGAAA--TTTTGCCTGTGAAATTTTTTCCTC--TGATTAGATATTAATGTCCCGTTGA 

a score=2396
s mm6.chr8_random  23358307 262 +  24571640 CCTTGGCTCCTACTACCAGAGCCATGGCCCCAGCTGAGGAGGAGGTGGGCCCCCGGCG-----GGGGGACTTCACAAGACTTGAGTATGAACGCCGGGCACAACTGAAACTGATGGATGACCTTGATAAGGTGCTACGGCCCCGGGCC-TCAGGGACCGGGGGACCAGGGCGGGGCGGGCGCAGGGCCACCCGGCCACGCTCTGGTTGCTGTGATGACTCGGCCTTGGCACGAAGCCCAGCCCGCGGCCTGCTGGGTGAGGACCCTGT 
s fr1.chrUn       189956422 241 + 349519338 CCCGGACTCC---------AGGCACTCCTCCTGC--ATCAGTAGATGGGACGCCGCAGCGCAGAGGAGATTTCACAAGGCAGGAGTATGAGAGGCGACATCAACTGAAGGTCATGGAAGATTTGGACAAGGTGCTAAGGCAGAAACCCACCACCGTTCGTGGCGTTAAGAAACAGAGACCTAAGA----------------CTGTTTTCAGAGATGACTCCAGCCTCTCTCATAGCCCTGTCAAGGGATTAATTGGTAAGTAGTTTAT 

a score=2714
s mm6.chr8_random  23359516 75 +  24571640 TCTATCCTAGGTTCACGGCTCAGCAAGGTCTATTCCCAGTCCACGCTGTCCCTATCTACGGTGGCCAACGAGGCT 
s fr1.chrUn       189956730 75 + 349519338 TTTTTTGTAGGCACCAGGCTAAACAAGGTGTACTCCCACTCAACAATGAACCTTTCTTCGATGGCCAATGACTCT 

a score=3329
s mm6.chr8_random  23359911 133 +  24571640 CCCTCCCCTGCAGGGCCCCTTCTCCATCAGGCCTCATGTCTCCAAGCCGCCTGCCTGGC---AGTCGAGAACGTGACTGGGAGAATGGAAGCAATGCATCCTCCCCAGCATCAGTGCCTGAGTACACAGGTAAGTG 
s fr1.chrUn       189956974 133 + 349519338 CTCCTCCTAGCCGTTCACACTCTCCTTCACGGTTCATGTCACCAAGGCGAATGAGTGGTCAGAATGGGGAGAAGGACTGGGAGAATGG---CTCTACTATTTCATCAGCCTCCATTCCAGAATACACAGGTAAGCA 

a score=16390
s mm6.chr8_random  23360118 520 +  24571640 CTGCCCTCCAGGTCCCCGGCTATACAAGGAACCCAGCGCCAAGTCTAACAAGTTTATCATCCACAATGCCTTGTCACACTGCTGCCTGGCAGGCAAGGTGAATGAGCCCCAGAAGAACAGAATTCTAGAGGTGAGTCCCACAGCTGTCTGGGTGGGTAAGACTAGCGGGTA-----GAGCAGTAGTCCAGCCTGACC---------AGCTTCTTGCCACCATC-CCTCAGGAAATCGAGAAAAGCAAGGCCAACCACTTCCTGATTCTCTTTCGGGACTCAAGCTGCCAGTTCCGGGCCCTCTACACTCTGTCTGGGGAGACAGAGGAGCTATCGAGGCTGGCAGGCTATGGGCCTCGGACCGTCACTCCTGCCATGGTCGAAGGCATCTATAAGTACAACTCGGATCGCAAACGGTTCACCCAGATCCCTGCTAAAACCATGTCTATGAGTGTAGACGCCTTCACTATCCAGGGACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATA 
s fr1.chrUn       189957175 529 + 349519338 CTCTTTTTTAGGGCCAAAGCTATACAAGGAGCCTAGTTTTAAGTCTAATAAGTTCATTATACATAACGCTATCACTCGCTGCTGCCTGGCCGGTAAGGTCAACGAACCCCAGAAAAACAAGATTGTAGAGGTAGGCAGTGCTCTTGTGCCAGAGTCCAACATGGTCCTTCACTCACTATCAGTCAGCTGCTCTTACCTTATGTCTGCATTTTTCTCTACTCTCTCCTCAGGAAATGGAGAAAAGTGCTGCCAACCACTTCCTCATTCTTTTCAGGGATGTCAGTTGCCAGTTTAGAGCAGTTTACACCATGAACCCTGAGACTGAGGAGATGGTACGCCTCACTGGTATTGGCCCTCGTATCATCTTACCTGAGATGGTTGAGTCCATTTACAAATACAGTTCTGATCGTAAACAGTTCACTGTCATCCCGTCCAAAACCATGTCCATGAGTGTTGACGCCTTTACCATCCCCAGTCACTTTTGGCA----AAAGCGCCCAGGAACTCCTAAAAAGCT--CGGCACCCCAAAATA 

a score=4257
s mm6.chr8_random  23361893 351 +  24571640 TCAGTCTTCCTTTAGGCTCCCGAACACAGCAGCTGGTACACTCTGCTGTTCCAGTCGGACTTCTGTGGGGGAAAAGA-------------AGTGGGGTCAAG------------------GTGGGGGTGGATGGGGGGTGGCCCACCTCTGCTCTTAACCCTGGCCCCTGGGCTGGCCACTGACCATTGGGCTCCAGGTCCATCTCGTCCTCGTCCTCATCCTCGCCCAGCTGGATCTCCTCAGGGTTGGCCTGCTGAGCCAGCTCTGCCAATTCCTCCCTGGATGCATCACTCCTAGGGTTTCGAGAGGGAAGCTGGTAGCTGCCAGCTGCTTCAGTGGACCCCCTCCAGCCCCCAGCAGCTTCTCTGGAATACCCCTTTC 
s fr1.chrUn       159579043 344 - 349519338 TCAATCATCCTTAAGCCCTCCAAAGACAGCTGTGGGGACACTCTTCTGTTCAAGCTGCACCTCTGTGAAGGCCAAGAGCAAAAGAAAATTAGTGCAACCATGTTCACTAACTAAAGTCCTATTTAAGTGAGTATAGATAAACACAAATTTGCCCTGA----TGTTCCAGATGGTTGTTACTCACCCTCTGGGCCCTGGTCATTGTCGTCCTC---TTCATCGTCGTCGATGTCGATCTCATCGGGGTTAGCTTGTTTTGAGAGCTCAGCAAGTTCACTGCGAGAGGTATCACTCCTGTA----------------TAGGCACATACAACTTTTTT-------TTCCTCCATTTT--------TTTTCTGGAACATTTATTCC 

a score=6174
s mm6.chr8_random  23362270 151 +  24571640 CTGCTCTCACCTCACAAAGAAGATCTT-GCTCTGGGCCCTGGGGGGCTGGTCCCGCTCCGCCTCAGCTGCCAGCTGTTCTGCTCTCTGTTCCAGCAGCTTCATGTCATCCATGCCACTCTGCCCAGGAGCCAGGTCAGACACTGGAGGTGCA 
s fr1.chrUn       159579426 148 - 349519338 CAATACGAACCTGACAAAGAGAATCTTCTCTTTGGGTTTCGG----TTTGTCCTTCTCAGCTTCTGCAGCCAGCTGCTGAGCTTTCTGCTCCAACATCTTCATGTCATCCATTCCCATTTGGCCTGGAGCAAGATCTGACACTGGATGTGCA 

a score=8277
s mm6.chr8_random  23362577 190 +  24571640 CTCACCGGTGCCTGTGGCACTGCCCGACACCTTGAGCATCTGTGAAGCCATGAAGTTGACCTGAGTATTGTATGTGGCCTGCACACTCCGCCGTATCCTCAGCATCTCCCTGATGGTATCCTCATTGCCGTGCCGAACCTCAAAGTCCTTCCATGTTTGCCAGAATGCCCCAGTTGTCTGTGGTGGGGCG 
s fr1.chrUn       159579850 190 - 349519338 CTCACCCGTTCCTGTGGAGCTTGTTGTGGCCTTCAGCATCTGAGATGACATAAAGTTGACCTGGGTGTTGTATGTGGCCTGGATACTGCGTTTGATTCTCAGCATCTCACGAATAGTGTCCTCATTTCCATGACGGATCTCAAATTCTTTCCAGGTCTGCCAGAAATTAGCTGTCACCTGAACCAATACA 

a score=20205
s mm6.chr8_random  23362839 733 +  24571640 CAACCCGTACCCGGGGATCACAGATCTGGGAGCAGAAGCTGTAGATGGCCCGGGCGCGGTCGATTTCACCGAGCTTGCACTCCATGTCTGCAAACCGCAGGCACATCTCACGGGCATGCTCATCAGACAGCACCTGGCACCATGGGGTCAGGGAGAGCAGGGGTGAAGGAAAGGGGTCCCAGTGCCTGCCTGTAGGAAAGCCTTCTGCCATCCTCTCCACAGGCAGGCTTTCTGGGATCCTTCTGTCTGCATGGACCCCAACCCCATACCAGGTCACTAGTGGTGGGTACCTCAATGGCCTTCTGGTAGATGCCACGAGTGTGGGTGACGCCATAGATCTCAGCAGCTCGCTTGATGTAGATGTTAAACATGTCGTACTGCTGTGCTGGCTCCACTGCCCTGGTCGCACGGTCATACACAGCCATGGCATGGCGGGCAAGGCCCCACTCCTCCTCCAGCTGTGCGTAGAGCAGGTATAAAGCT------------------------GCACACACAAGGGTCCAGTTAGCAGCGCGCCACTCAGCACATGCTACTCATCCCCACGTCCCATGACAGCCCACA-GACTCCTCACTCTTGGCATATTTTGGTGGGCAGCCATCGAGTGCCTGCTCAAAGAGATCCCGTGCACGCTCCAGCTTTCGGCCCCCATAGCGCGAGATGAATTTGGTCAGGTAGGTGCTCCAGATGTCTGAAACATTGGGCCACTTGAACAGTGAGATGCCACGCTCATATGCCT 
s fr1.chrUn       159580118 683 - 349519338 AGGATCTCACCCTAGGGTCACAGATTTGTGAGCAGTAGGAGTAGATTGCTCTGGCTCGATCAATTTCACCCAGCTTACTCTCCATGTCAGAAAATCGCAGACACATGTCCCGTGCGTGCTCATCAGGAAGAACCT------------------------------AAGCAAA-----CCCAA------------------------------------ACATACAAATAATTTAGG-TTTAAGTGACTGTGATAGCAACAATGCATTTCCACTTTA-TGTTGACATTCACCTCAATAGCTTTCTGATAAATTTCTCTGGTGTATGTGACTCCATATATTTCAGCTGCTCTCTTGATGTAGATATTGAACATGTGGTGTCGCTCTTCTACTTCTACTGCCTCAGTTGCTCTTTCATAGACAGCCATAGCATGTCGAGCCAGCCCATAATTCTCCTCCAGTTTTGCATACAGCAGATAAATAGCTAGAAAGCAGAAAATTCAGAACACAGTATATGTAAAAATCAACT--GCAGTTTGAAAGACATCTTATAATAATCATAAACAGCAAATATTCTAATACAAATGTCCACTTACTTTTTGCAAACTTGGCAGGGCAACCATCCAGAGCTTGTTCAAATAAATCCCTTGCTCTCTCCAGCTTTTTGCCACCATAGCGGTCAATGAACTTGGTAAGATAAGTGTTCCAGATATCATAAACATTTGGCCACCTGAACAGAGCAATACCACGCTCGTATGCCT 

a score=7766
s mm6.chr8_random  23364693 131 +  24571640 CTCACCTTGAAGCTCTCCTCAAAGTACTTGTGCTCCTCCAGGAACATGGCATAGTTAATAACGATCTGTGGCGTGGCTATGCGCAGGTCCAGGATTCGGTCATACACGGCCTTGGTTGACTGT-------GGGAACAA 
s fr1.chrUn       159580895 138 - 349519338 CTTACTTTGAAGCTTTCCTCAAAGTAGTTGTGTTCTTCAAGGAACATAGCATAATTGATGATGATTTGTGGAGTGGCGATGCGGAGGTCAATAATTCGGTCATATACTGCTTTTGTTGACTATACAAAACAAGAACAA 

a score=6356
s mm6.chr8_random  23364887 141 +  24571640 AGCTGACCTGGAAAGTGCCCAGGCTTTCCTCCAAGTCGGCAAGCATGGACCACACCTTCAGCGACTTATATACACGGTTCTGCACAGGTTCTGAACCATCAAAGTACTCAGCTCGGCGGGCAGGCAAAGCCGTGGCTTTCT 
s fr1.chrUn       159581148 141 - 349519338 AAAATACCTGGAATGTCCCAAGACTTTCCTCCAAATCTGCCAGCATAGACCAAACTTTCAGGGACTTGTAGACTCTGTTTTGGACAGGCTCAGATGCATCAAAGTACTCTGCTTTCTTAGATGGGATGGCCGTCGCTTTCT 

a score=18314
s mm6.chr8_random  23365097 595 +  24571640 CCTTACCCGCAGCAGCTTTAAGGCCTCATCGTAATTCTCGTGCCTGAGCTCTAGCTCCCCACACTGGCACCACACACTTGCCAGGTCATCCACCTGCTTGAAGTTCACCTTGGTGGCCTTCTCTAGGATGACACGAGCCTGTGGTAATGGGCAGAGACTAGCTGAGGTCT---TGCCAC---------TTGGCCACCCCAAGTCCCGTGGTGAAATGTAATACACACACCGCAC-----ACTCACATCATCCAGCTGTCCATTGTCTTCGTAAAACTTGGCGAATGCAACCCACAGTGTGTGGGGCTTGCCTGTGGCTTTGAAGGGGTCTACTGTTTGCACAGCCTCTGTGTATGTGTTGATAATCTAGAGCAGGAAGGTCACACAAGTGAGGGCAGGGTTGGGCCATGGCAGCTCTATGGGGCAGAAGGAGACGGGTTGGAACCATCACACACCTCCCGAGGGCGGCCCTGATGGAGGGCTACACGCTTGTGCCACTCGTGGACGTGGTGTGGGTTCTGGCGCAGAAGGACACTATTGAGAAGCAGGGGCCGTCGGCTGATGAGCTGTTCGAAGCGGGCCAGGCGCAGCTCTAGGTCCACATCGTCTAGAA 
s fr1.chrUn       159581777 584 - 349519338 CCTTACCCTGAGTATGCGTAATGCCTGTTCATAGTTCTCATGGCGCAGTTCCATCTCCCCATATTCACACCAAACCACTGCAAGGTCATCCACCTGCTTATAGTTCACTTTGGTAGCCTTTTCAAAGATTGTCCGAGCCTGTG---------AGATATTCATTCAAACCTCAGTACCACGCATAAAAATTGGTAACAAC--------TGGTATAATACAGCCCAAATAAGACCTTAGTAGCTTACATCATCAAGCTGCTCATTTTCTTCATAGAATTTAGCAAAGGAAACCCAAAGGGAGTGAGGCTTTCCAGTGGCCTTGATTGGATCCACAGTCTGTACTGCCTCAGTGTATGTGTTGATGATCTAGATTAAGAG---TAGACA------TGCATAATTAGAAAATAATAATTTCATAATAACAAAGTGTACCTCCTTGAACCCT--CTTACCTGTCGCGGATTACCGTCATATAGTTTCACTCGCTTATGCCACTCGTGAACATTGTGAGGGTTCTGCCGCAGCAACACACTGTTCAACAGAAGGGGGCGACGGGCTATCAACTGCTCAAAGCGAGCCAGTCTAAGCTCCAAGTCTATGTCATCTAGGA 

a score=9129
s mm6.chr8_random  23365975 152 +  24571640 CGTACCCTCCTCCTCACGCCCCAGTTCAGAGGCAGTCTCCATCTTCGCTGCAATCATGCTCTCCTCAAACTGGGCGTAGCTGTCGAACACCTGGGTGAAGTCCCGCACGGTCATCACCGTGCGGATGGCCTCCTCATACACATCCCGAGCCT 
s fr1.chrUn       159582441 152 - 349519338 CACACCTTCTTCATCCTGCCCCATTTCGGCAGTGGTTTCCATCTTTGCCGCAATCATGTTTTCCTCAAACTGGGCATAACTATCAAACACTTGTGTAAAGTCTCTTACTGTTACCACTGTAAGAATGGCCTCCTCATACACATCACGGGCCT 

a score=15244
s mm6.chr8_random  23367722 403 +  24571640 CACATACCTTTTCGAAGTGGCCACTGCGGATATAGTAGTCTGCCAAAGAGCACCACAGCTTGCCCAGCTGGTCAGTGAAACGGGTGAGCCCACCACGGATTATGGCATCCACATTGAGAGACTGTACCTTGTCCGGATTCTGGGAGATAAGGTCACACAGCTCGTGCCACAGCTGC-------AGGACACAGGGTGTTGGGGGAACA-TCTCAGTCTCGGTCCATGAGGGAAGACACCTCTCACCCAGTCTCCACATTCCAGGGA---ACCCACCTGGTAGTTGGATTTACCAGCCTTGGATACAAAGCGCTCATCATTCACCACGGTGGCCAGGCGCTGTGCAGCCTCGTCTAGCCGGTCACTGGATTTGAGATACTCGATGTATTCCTCAGCGCTCTCAGGACTCAGCTGGA 
s fr1.chrUn       159582746 409 - 349519338 CACCTACCTTTTCAAAATGACCACTCCGGATATAATAGTCTGCCAAAGAACACCAGAGTTTTCCAAGTTGGTCTGTGAACCGAGTGAGGCCACCTCTGATGATGGCACCTACATTTAAAGAGGTCACCTTATCTGGATTTTGAGAGATCAGGTCACAGAGTTCATGCCACAACTGTTAAAAAAATGAAACAAACACATAAGAAACCACTTTCAAAGGGAGCTTAAAATGGTAGA-----TTCAATTGCTCCTTGAAATTCAGAGATACTCTTACTTGATAATTTGATTTTCCTTCTTTTGACACAAAGCTTTCATCATTAACTACAGCTGCTAGACGGAGAGCAGCTTCATCCAGGCGGCCAACAGACCGTAAGTAATCTATGTATTCCTCGGCATTCTCAGGGCAAAGCTGGA 

a score=8976
s mm6.chr8_random  23369736 266 +  24571640 AGTGAGCCATGTTTGGAAGCCTACCTAGGAACTGGTCACTTCAATGGTGCTCACCTTGAGGAAGCGACGGTAGCCTCGCACAGCAGTCTCAGGCAGTGGGTGGGAGCGCAGGAAACGTAGATACAGGGGCCAGATGCGAGAGTGTTGTGTGATGGGCAGTGCCCTGAGGGCACGGTCAAAGGTGCGGCGGGTATGTGTTACCCTTCCCTGGTCCATGAGAAACTGGCAGTAGTCTAACCACAGGCGTGGCATCTGAAAATAATGGA 
s fr1.chrUn       159583480 262 - 349519338 AGTGATCTATATTGAAGACTCAAATTTGGAAGTGA--AGCTGTAGGCAATTTACCTTAAGGTATCTGCGATATACCCGAATGGCAGTCTCGGGCAGGGAAAGACTGCGGACAAAGCGGAGGTACAGAGGCCAGATGCGTGGGTGCTGAGTAACAGGAAGAGCTCTGAGGGCACGGTCAAATGTTTGGCGACTTCTTGTTATCTTACTCTGAGACACAAGGAACTGGCAGTAATCTAGCCATATTCTAGGCATCT--AGATGAAGGA 

a score=6413
s mm6.chr8_random  23370275 154 +  24571640 TACCTTGTGCATGAACACAAAGGCCCTCTCATGGCAGTTGTTGACATCTTCATAGGCAGGATCAGTCACACAGCGATGTTTCACCTGTGCCCGGCGTGCCTTCAGATATCGGTACCAGAGTTTGTAGCTAAAGAGCAGGAAAGGCAGATAAGAT 
s fr1.chrUn       159583831 153 - 349519338 TACCTTGTGCATAAACACCAAGGCCCTTTCATGGCAATTATTGATCTCTTCATAGCTGGGGTCTGTTATACATTTCCCTTTCACTTGTTTCCGTCTCTCTCTGAGATAATTATACCACAACTTGTAGCTGCAG-GTGGGGAAAAAAGATTACAT 

a score=6491
s mm6.chr8_random  23370677 154 +  24571640 CACCTGCAGGGAAGCAGTTTGAGTGCCCGCTCATACAACTGGTTGAGTCGGGGCTTGGGGGCCCCCTGTTTGAACTCGATGTAGCGGAGCCAGCATTTGACGGAGAACTGGTTCCTCATGATTTCTTCCTCATAGGGAAGGTCCTCTTCCTCCT 
s fr1.chrUn       159584167 154 - 349519338 TACCTTCCAGGTAGCTCTTTCAGAGCCCTCTCATATATCATGTTGAGGATGGATTTTTGGCCATTTTGTTTAAATTCGATGTAACGCATCCAACACTTGACTGAATATGGGTTCCTGATTATCTCTTCCTCATAAGGAAGATCGTCATCTTCCT 

a score=1533
s mm6.chr8_random  23382728 230 +  24571640 AAGTGGTGCTGCTGGGACC----CAGCTTCCTAGACGTAGAGAGAGAGAGAACAGATGGACCGGGAGGCGGACCAGGTGCGC-AGAGGGCGTGGACCGAACCCACGGGGTGGGGCCCACGTGGATGACGCGTAGAGCCACGCCCCCACCTTGGGACCGACCCGGAAGCAGCGC--------TATTCCTCAGGGGAAG-ATGGCGCCCTTGGGGCTGAAGGCGGTGGTAGGGGAAAGTGAGTGTC 
s fr1.chrUn       239832995 232 + 349519338 AACTGGAGACGCTGGTTCCTCCGCAGCGACGT-GAGGTGAGAAGAGGAGGAGGAGGAGgaggaagagggggagcaagggagagagaggggagagagagagaggagagaacgagagagaggagagagaagag-agagagagg----------gggagggagggagagGCAGAGCGCTCAGTGTAACACTCAGCAGCATCATGGCACCCATCGGATTAAAGGCGGTGGTCGGCGAAAGTAAGATTC 

a score=2552
s mm6.chr8_random  23383942 132 +  24571640 TTCCCTTCTTTCTTCCCTGTAGAAATTTTAAGCGGCGTCATCCGGAGCGTTAAGAAGGATGGCGAGTGGAAGGTAGGGGCTG-------AGGCAGAATGCCTGGAGACCCAGGGGCAGCCTTTTACCCAGATCTATGCA 
s fr1.chrUn       239840334 129 + 349519338 TCCACTGTTTTGACTTTTCCAGAGATTATGAATGATGTGATCAAGAAGGTGAAGAAGAAGGGAGAATGGAAGGTAAGACGTGCACAGTCAGGGACAATATCCTCAAA-------ACAACCTTTTG---GGATCTATGCA 

a score=3938
s mm6.chr8_random  23384112 350 +  24571640 AATAAGCTGTTAATCCATAGGGGTGGGTTTGGGTAGATGGATGCCCCA-CTGCCTCTGATTCTCCTGGGACCAGCTACAGACATT----------TTTGTACGGCTCACCTCTCCTTGTGTCTATACCCATTCATCTGGTCAGGTCCTCATCATGGATCACCCGAGCATGCGAATCTTGTCATCCTGTTGTAAAATGTCAGATATCCTGGCGGAGGGCATCACCAGTGAGTGGATGAATCTGAGGTGGACCCTTGAATG--TGGGGTGTCTGGATGTATCCCTTGAGTGTGAGATCCCTTCAGACTGGTTCAGTCTGAAGTTC------------------TCCCTACATAGCCTGGAGGAGGTTTATAGGATTCCTTCCA 
s fr1.chrUn       239841276 361 + 349519338 AATAATCAGTTTTTTTATGTTTACAGGTCAGCGTTTATGGTGACAACAGCTGGATCTGA--CACTTGTAACCTGTGATGTTCATGACAAACCTAATTTTTACAGCTCAAGTCTTCTT--------------TTCTGTTGCCAGGCGCTGATCGTGGATCAGCTGAGCATGAGGATGCTGTCGTCCTGCTGCAAGATGACAGACATCATGACCGAAGGCATCACCAGTAAGAGATGGCCACAACGGCTGTTTTATCAATGGCTATGCTTTTTGGGAAGTGTTATGGAGTGTG----CCCGTCTGTTTCCCCAGTTGTGGAGGACATCAACAAGAGACGAGAGCCTCTGCCCAGCCTGGAGTCCATTTACCTGATTACCCCCA 

a score=5357
s mm6.chr8_random 23384996 118 +  24571640 CATGTCAAACATTTGTATGTCTTCCTCTGTTGCTTTTAGTCGTGGAAGACATCAACAAACGGAGAGAACCCATTCCCAGCTTGGAGGCAATTTATTTGCTGAGTCCCACGGAGAAGGT 
s fr1.chrUn       38856433 117 + 349519338 CATGCCAAAGAACTCAAAGCCCTGTTTT-TTCCTTTTAGTTGTGGAGGACATAAATAAACGGAGGGAGCCCATTTCTAGTTTGGAGGCCATTTATTTGATTTCACCTGTAGAGAAGGT 

a score=3311
s mm6.chr8_random  23385558 119 +  24571640 GAGTCTGACTCCAACAGTAATCTCTCC-----TCCCCAGTCGGTTCAGGCCCTGATTGCGGACTTCCAGGGAACACCAACCTTCACCTACAAAGCAGCCCATATCTTCTTCACTGACAGTGAGT 
s fr1.chrUn       239842842 124 + 349519338 GACTGTGGTTTACTCAGCAGTCTGTTTCTGTGTCCTCAGTCTGTCCGAACACTCATCTCAGACTTCAAAGATCCTCATTCAGCTAAATACAAGGCAGCTCATGTTTTCTTCACTGACTGTGAGT 

a score=-3040
s mm6.chr8_random 23385677  83 +  24571640 GAGGC------------------------------GAACCAG-----GGTGTAGGTTGCTGTGCTGA---------------------GGTGGGGAGTTTGATGACAGGACATTGGTCT---------GACGGTCTCTCCC-----------TGCCAAC 
s fr1.chrUn       26454289 159 - 349519338 AGATCCTTTCTGCTCCCTCTCTGCTGGTCTCACTGGAACCCGCTTTGTGTGCTGGTCCCTAAACCGACCCAAGAGTCGGATCTTGCAGGCTGACAGATTCTCTTCCACAACTTTGGTGTCCACATGGTAACTGTTATTACCATTGTTATGACTGTGACT 

a score=4119
s mm6.chr8_random  23385760 206 +  24571640 CCAGCATGCCCTGAGCCCTTGTTCAGTGAACTGG------GCCGCTCTCGCCTGGCGAAGGCGGTGAAGACATTGAAAGAGATCCACCTTGCCTTCCTCCCCTATGAGGCCCAGGTACAGCCCAGCCTGTGGTGGGGAAGGGGCGGGCTGTCCTTG-----------------ACTGAGTGTCCAAGCTCCCGCTGGAACGCACA----GAGCACCGACAGGGAC-TGAACAGT 
s fr1.chrUn       239843143 227 + 349519338 CTAGCCTGCCCTGATCCTCTCTTCAATGAGCTGGTGAAAAGCCGTACTTCC------AAAGTCACCAAGACTCTGACAGAGATCAACATCGCCTTCCTGCCCTACGAGTCGCAGGTAAATATCCAGCTGT-GCACGGTATGGGCGGGTAATAACTGCACATTTTACTGTTTGCACTTGTTGTTTATGCTGCTTTTGTCACAGAAATGATGAGCACAGGCAGGAATATCAACAGT 

a score=4700
s mm6.chr8_random  23386170 203 +  24571640 CAGGACAGCAGTGGGAAGTTGGTGATGGTGA----CACTTCTGTCCTTCCTAGGTGTTCTCTCTGGATGCCCCACATAGCACCTACAACCTTTACTGTCCATTCCGAGCAGGGGAGCGGGGGCGGCAGCTCGATGCACTGGCCCAGCAGATAGCCACACTGTGTGCCACTCTTCAGGAATACCCATCCATCCGATACCGCAAGTGGG 
s fr1.chrUn       239844489 206 + 349519338 CAGAAGATGAAAAGCAAACGTGTGATGGTGGAGTCCACCTTTGTGTGTGC-AGGTGTACTCTCTGGACAATCCTGATGCCTTCCACAGTTTCTACAGTCCCCACAAGACTCAGCTGAAGAACCCGGTGATGGAGAGGCTGGCGGAGCAGATTGCCACACTCTGTGCCACCCTGAAGGAGTACCCTGCAGTCCGATACCGAGGGTGAG 

a score=2622
s mm6.chr8_random  23387133 152 +  24571640 CCAGTCCTCCCAGCCCCCACACC----CTGATGTTCCTCTGTTTGACTGCGTCACCTCCAGGGGTCCAGAAGACACAGCCCAGCTGGCCCATGCTGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGTAAGGGGGA 
s fr1.chrUn       239844796 155 + 349519338 CCATTTCTCTTCTTCTTCTCACTTTATCTCACATCCCTTTATTTT-CTGCCAATCTAACAGTGAGTACAAAGATAATGCCACCTTGGCTCAGCTGGTTCAGGACAAACTGGACGCTTACAAGGCTGACGACCCCACCATGGGAGAGGTCAGAAGCA 

a score=10935
s mm6.chr8_random  23387326 363 +  24571640 GTGTCGTCATTCTTCTCTCTCCTTG-----CGTGCCCAGGGCCCAGAGAAAACACGCTCACAGCTACTCATAATGGACCGGGCAGCAGACCCCGTGTCCCCACTATTACACGAACTCACGTTCCAAGCCATGGCCTATGATCTTCTGGACATCGAACAGGACACATACAGGTAGA------------------------TTGGACCAGGAAGATGCCC--------GCCACCCCCATCCTTTGCCAACTTAAGCCCTTCTGTCTTCCAATCTGTCCTGTTGTTCCAGGTATGAGACCACAGGGCTGAGTGAGTCCCGGGAGAAGGCTGTCCTCCTGGATGAAGATGATGACCTGTGGGTGGAACTTCGGCACATGCACATAGCAGATGTTTCCAAGTGAG 
s fr1.chrUn       239845029 392 + 349519338 ATGTTGATTTTCACTCCTGTCCATTGCCCCCCTCCCCAGGGTCCAGACAAAGCACGTTCACAGCTGATCATCCTGGACAGGGCATTCGACCT-GTGTCTCCTGTCCTGCACGAGCTTACCTTCCAGGCTATGGGCTACGACCTGCTGCCAATCGAGAATGACGTCTACAAGTAGGACAAACACTCCCACTATGTGTATTTTACAGCTTGAATAAGCCCCCGCTACAGCAAGCTCGTTCTTCTGACAAAGTGGGACTTT---TCGTGGGACTTTTCCTCTT----CAGGTACGAGACCAGTGGCATCGGAGACTCCCGTGAGAAGGAGGTCCTGCTGCATGAAGATGATGATCTGTGGGTCAGCCTGAGGCACAAGCACATAGCAGAGGTCTCCCAGTGAG 

a score=-415
s mm6.chr8_random 23387689 95 +  24571640 AGCTTCGGGTTTGGCTGGGTACTGGAGTGGGAGGGCCCCAGGTACCAGGCCTCA--TTCCTTAGGATTGTCCCTCTGTAAGTTACGATCTTCAGGCA 
s fr1.chrUn       38858464 97 + 349519338 TCTGTCAAAGCTAGATGAGTTTATGTGTGCCATTATTCCCAATGTTTGCCTTTGATTTTCTTTAAATGGGTTTTCTATTATTTTCAGTTATTAGATA 

a score=204
s mm6.chr8_random 23387826 161 +  24571640 TCCATGGCTTGGGACTGATCAG-----------------CTGGTAATAAGAGGCTTCCCTCTCCA----------------AATGTCTGAACATCTT------------------CTCTCTTCCCTTCCCTTGCTCTTGCTCATGTCTAGGAAGGTCACAGAACTCCTGAAGACATTCTGTGAGAGTAAGAGGCTGACCACAGACAAGGTAG 
s fr1.chrUn       38858607 208 + 349519338 ACCATGATTGGGAA--AATTAGATTTATGTTGTCACGCACTTTTAATAGTA--TTTTGCTCTGTATTATGTTGATTGAAACAATCTTTATACAAATTTAACCAAAGAAAATTACACACACACACAATTCTTTTTTGACTTTCAATTGTAGGAAGGTGAAAGATCTTCTCCGATCCTTTTGTGAAAGCAAGCGAATGAGCACTGACAATGTGA 

a score=6005
s mm6.chr8_random  23388091 233 +  24571640 TTACCTCAGGCCAACATCAAAGACCTGTCCCACATCCTGAAAAAGATGCCACAGTATCAGAAGGAGCTGAACAAGGTAA------------------------------------AAGCTGGACACTGAAA----------------------------------CCCACCCAGGC-----TCAGTCCGGCTGTCTC---ACTTAACCCAGTTCCCACCCTGCAGTACTCTACGCACCTGCATTTGGCAGATGACTGCATGAAGCATTTCAAGGGCTCGGTGGAGAAGCTGTGCAGTGTGGAGCAGGTAGG 
s fr1.chrUn       239845990 309 + 349519338 TTTCCACAGACCACAATGAGGGATCTGTCCCAGATGCTGAAGAAGATGCCGCAATACCAGAAGGAGCTCAGCAAGGTGAGTCTGTGTATGTGTGTTCTTGTACATGCTATATAGGAAGCTATATAGGTAAGGAAGGAAGGAAGGAGCCGAGGGAAGCATTATGTCCTCACAAAGATGGAAGTAAAACTGTGTGTTTTGTGACTGGGCCTTGTGTTC--TTTTCAGTACTCCACTCATCTGCAGCTAGCTGAGGACTGCATGAAGCATTACCAGGGAACAGTGGACAAACTGTGTCGCGTGGAACAGGTGAG 

a score=5283
s mm6.chr8_random  23388858 457 +  24571640 AGGACCTGGCCATGGGCTCTGATGCAGAGGGTGAGAAGATCAAGGACGCCATGAAGCTGATTGTCCCGGTGCTGCTGGATGCCTCGGTGCCACCCTACGACAAGATCCGGGTTCTGTTGCTCTACATCCTTCTGCGGAATGGTGGGTGAGGGAATGAAGGGCCAGGGATGGTCTAGATCCTACAGCCGTTAAAA---CTACAAGGCCCTCATCGCCTAGCATGCCtcttagtgtccttcctatcgctgtg-------ataaaacaccctaacagaagc-----------aactcagggagaagggggttatctgactc--------actgaggtcaagcttgaagcagctggt----catactcacagtcaatcagagagcagtgaattcat-gtaaacttgtgcttgtctctgcttctccagtcttacacagctcaggatcctctccccagggaatggtaccactcgtagtgggcaggtcttctcacctc 
s fr1.chrUn       239846444 462 + 349519338 AGGATCTGGCTATGGGCACAGACGCCGAGGGAGAAAAGATCAAAGACCCCATGAGGGCCATTGTGCCCATCCTGCTGGATGCTAATGTCAGCACATATGACAAAATCCGCATTATTCTGCTCTACATTTTCCTCAAGAATGGTAA--GAAGGACTAGAGGAAGACATTTAATCTGTATTTTCC--TCTTTGGAGCACCTCCAAATGATTCATTCGCTAATTT---------TTTTTTTCCCTACAATGTGGCTCAATAAAAATCACCTCTGTGTGAGCTCAGCATGTCTGATTTTCAGGAAACGCGAACATTTGTCTCCAGGTATTACAGAGG-AAAACCTGAACAAACTGATCCAGCATGCTCAGATTCCCCCTGAGGACAGCGAGATCATCACCAACATG-GCTCACCTGGGCGTTCCCATCATCACAGATGTAAG----CCCACCTC----------ACCAACACCAACGCGCCTGTCTCCTCCTCTC 

a score=4014
s mm6.chr8_random 23391250 90 +  24571640 AGGGGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAACGTGCAGTCGTACAGCAGCCTCATCCGGAATCTGGAGCAGCTGGG 
s fr1.chrUn       38860579 90 + 349519338 AGGCATTAGAGAGGAGAACCTCGCCAAACTCATCCAGCATGCAAACATACAGGAAGACAGTATTATCATCTCCAATTTGCAGAACCTGGG 

a score=3396
s mm6.chr8_random  23392824 140 +  24571640 CCATTTGGTCCCCACCTGGCCCCCTCTGTAGGGCTCAGGGACCTCTAGCCG---------GCTGGAGCGGAGAGAGCGCATG---GAGCCCACCTACCAGCTGTCTCGCTGGTCCCCAGTCATCAAGGATGTGATGGAGGTACACAAGTTGG 
s fr1.chrUn       239846969 148 + 349519338 CTGTGTGGTCTACACTCTGCCCCGTCTTATTAGTCCA----CCCTCCGCAGAGGAAAGAAGTTGGACAGGAAGGAGCGCGTGAGCGAGCAGACCTATCAGTTGTCCCGCTGGACACCGCTGGTGAAGGACATCATGGAGGTGTGTTTGTTGG 

a score=1686
s mm6.chr8_random  23393476 91 +  24571640 CAGGATGTGGTGGAGGACCGGCTAGACCGAAAGCTGTGGCCCTTTGTGTCTGACCCTGCCCCTG---TGCCTAGCTCCCAGGCAGCTGTCAGGT 
s fr1.chrUn       239847748 91 + 349519338 CAGGATGCTATAGATGACAAGCTCGACACCAAGCACTATCCTTACATCTCCACTCGCTCCTCTGCATCGTTTAGCACC---ACAGCAGTCAGGT 

a score=5999
s mm6.chr8_random  23393622 186 +  24571640 TCTACCCATCACCCCAGCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCCTAGGCTCATCGTGTACATTGTGGGTGGTGTCGCCATGTCGGAAATGAGGGCTGCCTATGAGGTGACCAGGGCCACTGAGGGCAAGTGGGAGGTGCTCATAGGTAAGTAG 
s fr1.chrUn       239848491 183 + 349519338 TTTTCCTGTTTCTCCGTCAGTGCTCGGTATGGCCACTGGCACAAGAATAAGACTCCTGGAGAGTACCGCACTGGGCCACGCGTTCTAGTCTTCATCATCGGCGGGGTCTCCTTCAGCGAGATGCGCTGCGCCTATGAGGTCACACAGGCCAATGGG---AAGTGGGAGGCCATCATTGGTAAGTAG 

a score=4037
s mm6.chr8_random 23394381 68 +  24571640 CCTGCCCAGGCTCTTCTCACATCCTTACTCCAACCCGCTTCCTCGATGACCTCAAGACACTGGATCAG 
s fr1.chrUn       38862035 68 + 349519338 CTTTTTCAGGCTCATCTCACATTCTGACTCCAACCAGCTTCCTAAATGACCTGAAGAGCCTGGACCAG 

a score=10397
s mm6.chr8_random 23401964 291 +  24571640 ATCCTGCCATTTGATGATCGTAGTGGGGTTGTCAGGCTCCCCCTCCAGAGTGATGAACTTACCTGTGAGGGTCTTCATAAGGATTTGCACCCCACCTTTGAGATGAAG---CAGGTATAGGGAACATCCCTCCGGGATGTTTTAGTCACTCTAGGCATGGCCATCTTCTAGTTTCTTACTGGCAAAGGTCGATCTCTCCTGGTTTGGGTTGGAGATGCCT---------TGGGTCTCTGCTGTGACAT----GGTGGTTTCGCTGGGCTCAACTTCTAGGGTGATAGGTTTGCCAGTTAAGGATTTT 
s fr1.chrUn       96010480 303 - 349519338 ATCTTGGCCTTC-ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATGCCCCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG---GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTT 

a score=6539
s mm6.chr8_random 24571303 104 +  24571640 CAGAGAAACATTGGCTACTTTAACCACCTTAAAGCGGACTCCAGGAATATCACCTACAGCATGACCTTTTCGACGAAATCCAGCAACCAGAACTTCATCATTTT 
s fr1.chrUn       61069685 104 - 349519338 CAGGGACACGTTGGCCACTTTGACCACCTTAAAACGGACTCCAGGAATGTCCCCCACGGCGTGGCCTTTACGTCCAAACCCTGCCACCAGAACCTCGTCGTTCT 

a score=10597
s mm6.chr8_random 24571407 232 +  24571640 CCTCAATGAAGTTCAGGCAGCCATCATTGGGCACGAACGCTGTGATCTTCTTCCCGTTCTTAATGAGCTGCACCCTGACGCACTTCCTGATGGCAGAATTTGGCTGTTTGGCCTCAACCCC-------------------------TACTTTT-----------------------------TCCAGCACAATTCCCTT-----TGCATGAGAGGCA-------------------------------------------------------CCCCCAAACGGATTGGCCTTCAGGGCTGTGCCCAAGTGGGCTTTCTTGTACTGTTTGTCATGCCACTTCTGATC 
s fr1.chrUn       61070381 346 - 349519338 CCTCGATGAAGTTGAGGCAGCCGTCGTTGGGAACGAAGGCTGTGATCTTCTTGCCGTTCTTGATGAGCTGGACTCTCACGCATTTCCTGATGGCAGAGTTGGGCTGCTTAGCCTCAACACCACTGTAGATAGAGAAGAACGTTAATCACCTTTAAACAAGCGACCAAGGAGTCAATATTAAAACCACCACACTTTCTTCACCGGACCAGGAGAGACAGCGCATTCATTGTACTCACACTTTCTCAAGGACGATGCCTTTAGCATGGGAGGCTCCTCCAAAAGGATTGGCCTTCAGAGCGGTGCCCAGATGGGCCTTCTTGTACTGTTTATCGTGCCATTTCTGCTC 

