##maf version=1 a score=2546 s mm6.chr19_random 126442 61 + 9870477 GGATAGCAGTGTGCTGCTGGCTTCTGTGAGACAAAGTGTAGACAAGGGCACTCTGATGGTG s fr1.chrUn 273529895 61 + 349519338 GGATTGTAGCGTGCTGCTTGTTCCTGTAACACAAAACTCAGATGAGAGCGCTGCGTCGCTG a score=7214 s mm6.chr19_random 126535 213 + 9870477 GACTGGAAAAGAGCTTGCAGAAAAAGAAAGATTGCTGGAG-atctatctatctatctatctatctatctatctatctatctatctacatatatgtatatctgtctatctatatatatatatatatatatatatttgtatatctgtatagctatatgtctatatatctatata-ctatacatctatatattatatactatatatatctatatatca s fr1.chrUn 273530003 205 + 349519338 GAGGGGAAGATGCTTTGTGTGCACTCTATTATTTCTAAAGAatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctgtctatc--tatctatctatctatctgtctatctgtctatctgtctatctgtctgtctgtctatctgtctgtctgtctgtctgtctgtc--------tgtctgtctgtctgtcA a score=3527 s mm6.chr19_random 191295 105 + 9870477 TCTCTCTCTCGTTTTGTTT-CAGGCTCAGAAATCCTGGATTGAAAGAGCATTTTATAAAAGAGAATGTGTTCACATCATACCGAGCACCAAAGACCCCCATAGGTA s fr1.chrUn 145150804 106 + 349519338 TCACTTATTCTCTTTGTCCGCAGTCCAAGAAACCCTGGATAGAAAGCACTTTCAGCAAGAGGGAATGCGTGTACATACTTCCAGTGTCAAAGGACCCCCACAGGTA a score=5566 s mm6.chr19_random 192611 221 + 9870477 TCTCCTGTTATAGGTGTTGCTGTGGACGCCTCATAGGCCAGCATGTTGGACTCACTCCCAGTATCTCTGTGCTTCAGAAT-----------GAGAAAAATGAGAGTC---GCCTCTCCCGAAATGACATCCA-GTCTGAGAAGTGGTCTATCAGCAAACACACTCAGCTCAGCCCAACAGACGCTTTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCTATGGTA s fr1.chrUn 145152504 224 + 349519338 TTCCCTGCTCCAGGTGCTGCTGTGGACGCCTGGTCAGGCAGCATGTTGGCTTCACAGCCAG-----CTTGGCCTCAAAATACTCGGATGTGAAGCTGGGTGAAAACACCGGCCTGTCC-------ACTTCAGCGGCTGAGGAATGGTCAGTGGAAAAACACACAGAAGCGAGCCCTACTGACGCCTATGGTGTCATCAACTTCCAGGGAGGGTCTCATTCATACAGAGCCAAGGTA a score=2318 s mm6.chr19_random 195540 77 + 9870477 ATTTTTAGCGAAGTCATCAAAATACTCTAGGA------GCAAACTTGTCTTTTATTTGAAAAAAAGAATTAAGGTAAGATATA s fr1.chrUn 47539218 83 - 349519338 ATTTTCATCTGGGACCGCCAGATTATCAAGCAATCACTGCAAACATGTCATTTATTTGAAATAAAGAAATTAAATTAAATATA a score=4627 s mm6.chr19_random 204832 640 + 9870477 aGTAGCTCATAAAAATTAGATAAATAAAGATAGATAGAT-----------------GACTGGCTGGTGagatagatagatagatagatagat---agatagatagatagatagatagatagatagatagatagatgatatataggtaaataaatagatatgatagatacatagatg-atggatagatacatagacg-atagagagatgtggtagatgcatagatgatagattggtagattgatagattagatagatagataTTACATACATCCGTAGGTAGATAACAGACTATTTAAGATACATTTACAGCTAGATATAACCTGATATTACCTGATTTAAAATTTTTCTTTGTATTATGCAGAACTTTAGAGTCTTCTGGAACCTCAAAAAACAGCAGGATCACAAAAACACAGTT---ATAACTACATCTAGTTTATTTAAAGGGATTGATCGTGTTGAAAATATTAGGAATGTCTAAATCATTGTACAAAT----ATAAGCAAAGGTAAAATGCCAACCAACATAATTTTATTTGGGCAAAAAGCTC---ACCAGGAAGGTTTGTTTAAACTACATTTAATAAAAATCAAGTAATTTCAAAATTGCCAATAACTTAGAATTTCAAC------AAAACCTTTAAAACTCGAACCCCTTTATCTCCTTTTCTCTAAAG s fr1.chrUn 47547398 545 - 349519338 AATGACaaataaatattacatataaatatatacatcaatattaaatattaCATCAGGGAGAGAGGGAGAgatggatggatggatgtatggattggggatgggtggatggattgatggatggatggattgatggatgatgggtggatggatggatggatg-gatggatggatggatggatggatggatggatggatggatggatgggtg-ggtggatggatggatgatggatggatggatggatggat-ggatggatgga---------------tggatggGT----------------------------------TCCCCTGT-----CGTGGTTCAGGTTTCTTCT----------------------GTCATCC-----------------------CACAAACATGCAGCTCAGATGAAAACCTCTCATCTGCTCGCAGAG-----TCATGT----------GACCATCGCTCAGTGGTTGTGTAAATCCGGACCAGATAACAGAAAATTCCAG---ACCCAGTTTCA-------GAAACGTTCTTCATCACTGAGGTTTGGC---AGCACATTCACAGCTGCCCGCCTCATTTCTTCACTGC---TCACCCATTTCTTCATCCCACTTAAAACCGTCAAAAGTTGAGCCTCTTAATCACCTTATCTCCAAAG a score=69 s mm6.chr19_random 205603 2 + 9870477 CT s fr1.chrUn 145152947 2 + 349519338 CC a score=12964 s mm6.chr19_random 205605 241 + 9870477 AGTATGTCCGAGTATCTTTTGATACGAAACCTGATCTCTTGCTACACCTGATGACCAAGGAATGGCAACTGGAGCTTCCCAAACTTCTCATCTCCGTGCACGGAGGGCTGCAGAACTTTGAACTCCAGCCCAAACTCAAGCAAGTCTTCGGGAAGGGGCTCATCAAAGCAGCCATGACAACTGGAGCCTGGATCTTCACTGGAGGGGTCAACACAGGTAATCAGAGTAGGATGGAGAAAGG s fr1.chrUn 194095672 236 + 349519338 AGTACATTCGGGTCTCCTATGACACCAAACCCGACAACCTGCTGCACCTGATGGTGAAGGACTGGCAGCTGGAGCTGCCCACCCTGCTCATCTCCGTGCACGGCGGCCTGCAGAACTTTGACCTGCAGCCGAAGCTGAAGCAAGTGTTCGGCAAGGGCCTGATCAAAGCCGCCGTCACCACGGGGGCGTGGATCTTCACGGGTGGAGTCAACACAGGT-----GGGTGGGTTGGTGGAGGG a score=7766 s mm6.chr19_random 209093 161 + 9870477 ATCCCCCCCCCTTCTCTTTTTCGG--------CTCTTAGGTGTCATTCGTCATGTTGGAGATGCCTTGAAAGACCATGCATCTAAGTCTCGAGGGAAGATATGTACCATAGGTATCGCCCCCTGGGGAATTGTGGAAAACCAGGAAGACCTGATTGGAAGAGATGTGAG s fr1.chrUn 194096167 169 + 349519338 ATTTTTCACGCTGCTATATTTTGGTATGCACACCTCCAGGGGTGATCCGTCATGTCGGAGACGCCTTAAAGGACCACTCCTCCAAGTCACGAGGAAAAGTGTGCGCAATAGGAATCGCTCCCTGGGGCATCCTGGAAAACAAAGAGGACCTCATCGGAAAAGATGTGAG a score=8032 s mm6.chr19_random 221528 332 + 9870477 CTTTTGCTGCCTGTAGGTAGTCCGACCATACCAGACCATGTCCAATCCTATGAGCAAGCTCACCGTTCTCAATAGCATGCACTCCCACTTCATCCTGGCTGACAATGGGACCACGGGGAAATACGGAGCAGAGGTGAAACTCCGCAGACAACTGGAAAAGCACATTTCACTCCAGAAGATAAACACAAGTAAGTTGAGCCACACTGTGACTACCGCACTGACTAGAAAACGAATGCTAAATGTTTGTGTATCCTATGCATCAAGGAGAGGAAAACTCAAGGACACTGTAGGCACCAGCCATCCTTCCT---TCTGGGCCAGTGAGGAGACAGAGA s fr1.chrUn 194096393 325 + 349519338 CCTCCTCTGTTCCCAGGTAACCAGATCCTATCAGTCGATGGCGAACCCACTGAGCAAGCTGGCTGTGCTCAACAGCAGCCACTCACACTTCATCCTGACCGACAACGGCACCTGCGGGAAGTACGGCTCCGAAGTCAAGCTCCGCCGGCTCCTGGAGAAGCACATCTCTCTGCAGAAGATCAACACCCGTACGTCAGGCGACCAT---CCTGTTGCACCTATTCCGGCCTCTGTACTCTGCGAGTGTG-AACCAATGC-----TGGGCAGAGAACTCTGTGAC-CTGTGGGCTTCCCTTTGTCATCCTATGCCTGGAGCTCGGATAAGGCAGGGA a score=7270 s mm6.chr19_random 666702 116 + 9870477 CCCAGGCTATGCTCCCGTCACCGGGATGTGCCACCCTGTCCGCAGCTGTACTCTGAACCATGAAGATGGCTTCTCCTCGGCATTTGTGGTGGCTCACGAGACGGGCCATGTGTAAG s fr1.chrUn 113636788 116 - 349519338 CCTAGGTTACGCCCCAGTAACGGGCATGTGCCACCCCGTCAGGAGCTGCACTTTGAACCACGAGGATGGGTTCTCCTCTGCCTTTGTGGTGGCACATGAAACAGGACATGTGTAAG a score=9991 s mm6.chr19_random 667496 165 + 9870477 CTTGCTCCTCACACAGGCTGGGCATGGAGCATGACGGGCAAGGCAACCGCTGCGGTGACGAGGTGCGGCTGGGCAGCATCATGGCCCCCCTGGTACAGGCTGCCTTCCATCGCTTCCACTGGTCCCGCTGCAGCCAGCAGGAGCTCAGCCGCTACCTGCAGTGAG s fr1.chrUn 113637057 165 - 349519338 ctgtctctgtctGCAGGCTAGGGATGGAGCACGATGGTCAGGGTAACCGCTGTGGAGATGAAGTGCACATGGGCAGCATCATGGCCCCGCTGGTACAAGCTGCCTTCCACCGATTTCACTGGTCCAGATGTAGCATGCAAGAGCTTGGCCGCTACCTTCAGTGAG a score=8579 s mm6.chr19_random 667916 329 + 9870477 GACCAGAGTTATGAAGTCTTGACCACCATAGTAACTCCGGAAAGGACCT---CAGCTTCCCCCACTGAAGGTTGCTTGTGGCACCCACCTGTCCCCTTA--CAGTTCCTATGACTGCCTGCGGGATGATCCCTTCGCCCACGACTGGCCAGCATTGCCTCAACTCCCAGGGCTTCACTATTCCATGAACGAGCAGTGTCGCTTTGACTTTGGCCTGGGTTACATGATGTGCACTGCGGTGAGTATCCCCAGGGCCCTGCGGTGAGTGACCCTTTAAGGAGCCAGCCACTCCTGCCCAGGGCCATAGGGATGACCACTTAATT-TCCATACTGGAT s fr1.chrUn 113637452 297 - 349519338 CATCAGCACTATTCCGTCTAAAGCATTA------------AAAGGACATGGACAACTTCCCTGA--------------------CCTGTTGTCTCCTGACCCAGCTCCTACGACTGTCTGCGCGACGACCCCTTTGACCACAACTGGCCTTCGCTGCCTCAGCTCCCTGGTTTGCACTACTCCATGAACGAGCAGTGCCGCTTCGACTTCGGCACGGGCTACACGATGTGCACCGCGGTAAGCTTCAC--AGGCCCCAC--TGAACCACATTTACACACCGAAGCCGCATAGATTCAGGTTTAGAAGA--GACCAGTGCGTTGTTTACACTGGAT a score=6701 s mm6.chr19_random 668512 134 + 9870477 TTTTCTCTTCCAGTTCCGGACCTTCGACCCCTGCAAACAGCTCTGGTGCAGCCACCCAGACAACCCCTACTTTTGCAAGACAAAGAAGGGTCCTCCACTGGATGGTACTATGTGTGCGCCTGGCAAGGTGAGTC s fr1.chrUn 113639202 134 - 349519338 TGTCCCCCTGCAGTACCGTACATTTGACCCGTGCAAGCAGCTGTGGTGTAGCCACCCAGAAAATCCCTTTTTCTGCAAGACCAAGAAAGGACCCCCCATCGATGGCACCACGTGTGGGAACGGGAAGGTAGATC a score=-19 s mm6.chr19_random 668646 64 + 9870477 AGG-AGTAAGGGCTCTTCACCCTTAAGACACACAATCACCAGGGGCAGGCCCTGTAGTATCTGCA s fr1.chrUn 211033994 63 - 349519338 AGGCCACACTGGGTCAACAGCCTCA--GCAAACAATTGAAAAGTGTCAGCAAGATAACATTTTCA a score=1551 s mm6.chr19_random 1234296 236 + 9870477 TTAAATTTAGGAAGCTTAAAACGAGATTTCTTTGCTTTCCCATCAA--TATTGACCTTG-------------GGAGCAGAAATGTCCACTTCTGGGCCCTTCAAATCC------ACCCTGGGAAC---------------------TTTAATGTCACCCTCCAGTTTGGGTCCAGAG------ATATCAACATCT---------CCCTTGACCTTTGAGCCCTTTAAATT---------------------CAAGTCAATTTCTGGCATAGAGATCTTGGGCATGCTTACATGCATGTCAGGCATTTTCAGTTT s fr1.chrUn 204502995 314 - 349519338 TTAAATGAAGGGAGTCTGAACTTTGTATTTGCTGAATTAAGATCAAACTGAGGACCTTGCATGTTTCCTGAGGGACCATTCATGTCAAAATCTGGACCTCTTATGTCTCTTTTAACCTGAGGGACACCAAAACTATTTTCAGGCTGTCTCATACTACCATTTATTTGGAGATCAGGGCGCTTTATATTGAGATCTGTCTTAGGGCCTTTGACCCTAGAATCGGGTAAATTTACATCTGGCATATTTCCTGATAGGTCTATTTCTGGTGTCTTTGCCTGAAGCCCAGATACATTTGTGCTTGGCATTTTTAATTT a score=609 s mm6.chr19_random 1234664 11 + 9870477 TCCTTTCACAT s fr1.chrUn 204503309 11 - 349519338 TCCTTTAAAAT a score=2037 s mm6.chr19_random 1234675 212 + 9870477 TGGGGCCTTTAAGATTAAGAT--------TCAAATCTGGCATGGAGATCTTAGGAGCCTTTATGTTC---------ACCTCTGGCATCTTAAACTTGGGACCCTTCAGTTTTGCATCTGGCCCTTCAATATTCACATCAGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCCTTGGGCAGGTTCACATCTACTTCAGGGCCTTCTCCCTTGAAGCCA s fr1.chrUn 204503779 204 - 349519338 TGGGGCCATTAATGCCAACATCTGGCCCATCAAAGTTTCCATCAATTTCT--GGTCCCTTTATATTTTGTAGACTAACTTTTGGCATTTTCAATTTTGGCATTTTGAGTTTTGTTTTAGGTGACCCAATGTTGACACCTGGAGTGCTCACATCCAATTTTGGAGCTTTGACTCTCATATCAG------------GCAAATCCATGTAAGGA-----------GAATCAA a score=1806 s mm6.chr19_random 1234887 161 + 9870477 GGCATGCTGAACTTGGGCATTTTCACCTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGAACATCCACATCTGGAACATCAATGTCCACTTTGGGGCCTTTGATGTCAACTTCAGGAACTTTAATCTCACCTTCCACTTTGGGCAGAGACATATCCACATC s fr1.chrUn 204503394 135 - 349519338 GGCATTTTGATTTTAGACTTTTTAATATTTG----CTTCAGG--CAAGCC---------AATATTGAAATCTGGGACATTCATATCTAACTTGGGAGTTTTGTTTTTCATTTTTGGTAAATCCATCT-----------TGGGGCTGTGAAATCCACCCTTT a score=2553 s mm6.chr19_random 1235048 286 + 9870477 ACCCTTCACTTTGGGGCCTTTCAGGTTTAAGTCAATGTCAGGCATGGAGATCTTGGGGGCCTTGATGTTCATCTCAGGCATCTTGAACTTGGGGCCTTTCAGGGTTGCATCTGGCCCTTCAATGTTCACATCTGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCCTTGGGCAGGTTCACATCTACTTCTGGACCCTCTGCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCATTTTGGGCATCTTCAGGTGCCAGTCTGGGCCCTGCACG s fr1.chrUn 204503339 235 - 349519338 CACATTGAAGTCAGGTCCCTGAAAGTCTCCATTGATGTCAA----------TTTGGGGGCC-----------ATTTGGCATTTTGATTTTAGACTTTTTAATATTTGCTTCAGGCAAGCCAATATTGAAATCTGGGACATTCATATCTAACTTGGG------------------AGTTTTGTTT---------TTCATTTTTGGTAAATCCATCTTGGGGCTGTGAAATCCACCCTT---TATTTTACTTTTTGGCGCTGTCAGATGAAAGTCTGGATTTTTCAGG a score=699 s mm6.chr19_random 1235334 59 + 9870477 TCCATATCTGGAGCATTGATGTCCATTTTG------------------------------------GGACCTTTGATGTCAACATCTGGGCCTTT s fr1.chrUn 204502686 95 - 349519338 TTCCCATTTACACCAGTGATATCCGATCTGCGATTCTTAACAGATGGTCTGTTAAAGTTTAATAAAGGATCATCGATGTTGAGGTCTGGATTTTT a score=1306 s mm6.chr19_random 1235424 128 + 9870477 TCTACATCACCCTTCACTTTGGGACCCTTAAGATGTAAATCTGGCATGGAGATCTTTGGAGCCTTGATGTTCATCTCAGGCATCTTGAA---CTTGGGGCCCTTCAGCTTTGCATCTGGACCTTCAATATT s fr1.chrUn 204502798 121 - 349519338 TCTGCATCA----TCACTTTTTGGATGCCAAGGTCCATGTTAGGAGTGTTGACACTTGGACCAGTAATATTCCCCTT---TATCTGGGAAGGTTTTGTGC---TCAGGTTTGCATTTGGAGGAAAAAAATT a score=2277 s mm6.chr19_random 1235610 1262 + 9870477 AGGCTC--ACATCTACTTCAGGGCCTTCTCCCTTGAAGCCAGGCATGCTGAACTTGGGCATTTTTATTTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGGACATCCACATCTGGAACATCAATGTCCACTTTGGGGCCTATTGATGTCAACTTCAGGAACTTTAATCTCACCTTCCACTTTGGGCAGAGACACATC---------------------CACATCACCCTTCACTTTGGGGCCTTTCAGGTTTAAGTCAATGTCAGGCATGGAGATCTTGGGGGCCTTGATGTTCATCTCAGGCATCTTGAACTTGGGGCCTTTCAGTTTTGCATCTGGCCCTTCAATATTCACATCTGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCCTTAGGCAGGCTCACATCTACTTCAGGGCCTTCTCCCTTGAAGCCAGGCATGCTGAACTTGGGCATTTTTATTTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGAACATCCACATCTGGAACATCAATGTCCACTTTGGGG------CCTTTGATGTCAACTTCAGGGAACTTTAATCTCACCTTCCACTTTGGGCAGAGACACATCCACATCACCCTTCACTTTGGGGCCTTTCAGGTTTAAGTCAATATCAGGCATGGAGATCTTTGGAGCCTTGATGTTCATCTCAGGCATCTTGAACTTGGGGCCCTTCAGTTTTGCATCTGGCCCTTCAATGTTCACATCTGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAATGTTAGCCTTAGGCAGGCTCACATCCACTTCTGGGCCCTCTCCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCACCTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGAACATCCACATCTGGAACATCAATGTCCACTTTGGGGCCTTTG----ATGTCAACTTCAGGAACTTTAATCTCACCTTCCACTTTGGGTAGAGACACATCCACATCACCCTTCACTTTGGGACCTTTCAGGTTTAAGTCAATATCAGGCATGGAGATCTTAGGGGCTTTGATGTTCATCTCAGGCATCTTAAATTTGGGGCCTTTTAAGCTTCCCTCTGGACATTCTACATTGAGTTCTGGGCCCTCAATATTCATACTGGGACCTTCTATATTAATGTCTCCTTTTGGTAAATCCACAGCCACATCAGGCCCTTCTGCTTTTATGCCAGACACACCAAACTTGGGCATTTTCATTTTGGGCATTTTTAGATTCCATTCTGGTCCATGAACATCCACA s fr1.chrUn 204502933 980 - 349519338 AGGCTCCAAAATCAATATCAGATCCTGTCCTGTTAAGATCTGACCCACCCAACTGCGGCAGCTTAAATGAAGGGAGTCTGAACTTTGTATTTGCTGAATTAAGATCAAACTGAGGACCTTGCATGTTTCCTGAGGGACC-ATTCATGTCAAAATCTGGACCTCTTATGTCTCTTTTAACCT------GAGGGACACCAAAACTATTTTCAGGCTGTCTCATACTACCATTTATTTGGAGATC------------------------------------AGGGCGCTTTATATTGAGATCTGTC---------TTAGGGCCTTTGACCCTAGAATCGGGT------AAATTTACATCTGGCATATT---------------TCCTGA-----------------TAGG----------TCTATTTCTGGTGTCTTTGCCTGAAGCCCAGATACATTTGTGCTTGGCATTTTTAATTT---TCCTTTAAAATG------------ATCAACATCTACATTTGGCACATTGAAGTCAGGTCCCTGAAAGTCTCCATTGATGTCAA--------------------------------------------------------------TTTGGGGGC---------------------------------------------------CATTT--GGCATTTTGATTTTAGACTTTTTAATATTTGCTTCAGGCAAGCCAATATTGAAATCTGGGACATTCATATCTAACTTGGG------------AGTTTTGTTTTT---------------CATTTTTGGTAAATCCATCTTGGGGCTGTGAAATCCACCCTT---TATTTTACTTTTTGGCGCTGTCAGATGAAAGTCTGG------ATTTTTCAGGTCTGAA---TTAATGTTAACATTTGACCCTTTGGGTAATTTGGTATTTAGGGATGGTGGCCCAAAATTAAATTCTGGAC-------CATCTACAGC----TGGACTAGAGAACC--------------CCACATCAGGTATG---CTCATATGTGGTTTG---------TCAGGTTTTCCAAAT---GAACTGCCAAAACCAACCTCTGGGATCTCAAAAAGAGGTTTGGTCTCTTTAAGTTTGGCCTTGGGGCC------ATTAATGCCAACATCTGGCCCATCAAAGTTTCCATCAATTTCTGGTCCCTTTATATTTTGTAGACTAACTTTTGGCATTTTCAATTTTGGCATTTTGAGTTTTGTTTTAGGTGACCCAATGTTGACA a score=1629 s mm6.chr19_random 1237085 47 + 9870477 TCTGGAGCATTAATATCAACTTTTGGAGCTGTTATATCAACATCTGG s fr1.chrUn 204503913 47 - 349519338 CCTGGAGTGCTCACATCCAATTTTGGAGCTTTGACTCTCATATCAGG a score=2476 s mm6.chr19_random 1237132 148 + 9870477 CTTTTTAAGTTTGACATCCACTTCAGGTGTTTGAACTTTGGACCCAGAAAAATTAAATTTAGGAAGCTTAAAACGAGATTTCTTTGCTTTCCCATCAATATTGACCTTGGGAGCAGAAATGTCCACTTCTGGGCCCTTCAAATCCACC s fr1.chrUn 204504611 130 - 349519338 TGCATTTAGATTTCCATCAATTTCAGGT------CCTTTTAGGCCTGGAAAACTAAATTTAGGAAACTTCAGTTTGGGCATTTT-----------AAATTTTGGCTTTGGT-GAACCAATGTTGACATCTGGACCATTCGCATCTAAC a score=1000 s mm6.chr19_random 1237302 234 + 9870477 CCAGTTTGGGTCCAGAGATATCAACATCTCCCTTGACCTTTGAGCCCTTTAAATTCAAGTCAATTTCTGGCATAGAGATCTTGGGCATGC--TTACATGCATGTCAGGCATTTTCAGTTTGGGACCCTTTAATTTTCCTTCAGGACCATGAACATCAATATCTGGAGCATTTACATCTAATTTTGGGCTCTTTATGTCAAGAGAAGGGCCTTTCAAATCACCCTCTATATTTGGAA s fr1.chrUn 204503960 176 - 349519338 CAAATCCATGTAAGGAGA-ATCAAATGCACCTTTTATCTTTGGTGATTTCAATCTCAAATC-----------TGGCGAATTTACATCTGCATTTAGGTCCAAGTTGGGTCCTTTTGGTAATGTACCAGAGATTTTTCCAGAAGGAGCATCAAC-----------------------------------TCTT-------------GGGGCCTTCAATTCACCACCTATATTAGGAA a score=1835 s mm6.chr19_random 1237536 131 + 9870477 TGGAAACATCCACATCTCCTTTCACATTGGGGCCTTTAAGATTAAGATTCAAATCTGGCATGGAGATCTTAGGAGCCTTT------------ATGTTC------------ACCTCTGGCATCTTAAACTTGGG------ACCCTTCAGTTTTGCATCTGGC s fr1.chrUn 204504841 149 - 349519338 TTGGGGTATTTAAGTC------AAGGTTGGGGCTTTTAAGGTTA------ACATCTGGCATTGCAATATTTGTTGTATTTAGTCCACTATCCATGTTTGCACTTAAATCGACATCTGGCATTTCAAAGCTAGGTTTTTTCCCTTTCAGTTTCACATTGGGT a score=4690 s mm6.chr19_random 1237710 530 + 9870477 CTGAGACATCAAGGTCAGCCTTGGGCAGGGTCACATCCACTTCTGGGCCCTCTGCTTTGAAGCCAGGCATGCTGAACTTAGGCATTTTCATCCTTGGGCATCTTCAGGTGCCAATCTGGGCCATGAACATCCATATCTGGGGCACTGATGTCCACTTTGGGACCTTTGATATCAACTTCAGGGCCTTTGAGGTCTCCTTCCACTTTAGGTAAAGAAACATCTACATCACCCTTCAACTTTGGTCCTTTCAGGTTCAGGTCAATTTCTGGCATTGAAATCTTGGGTGCCTTAAGGTGGAGATCAGGCATTTTAAACTTAGGGCCCTTCAGTTTCCCTTCTGGT---CCTTCAATATTAACATTAGGGCCTTCAATGTCCACCTTGGGTCCT---------GAGACATCAAGGTCAGCCTTGGGCAGATTTACATCCACTTCTGGACCTTCTCCTTTGAAGCCAGGCATGCTGAACTTAGGCATTTTCACCTTAGGC----ATCTTCAAGTGCCAGTCAGGACCATGTACATCAACATCGGGGGCACT s fr1.chrUn 204504136 481 - 349519338 CAGAGATATCTAAGCCAG------GTGATTTTAGATCCATGTTAGGGCCATGTAATACTGAACTAAAACTCCCCAGGTCTGGCAAGTTTAAGTTTGG-CTTCTTGAATTTTCCTGATGGTCCAGGAACATTGATATC---------AAAGTCAGATTTTGGACCATTGA-----AGTTCAGGG----------------------------AGGGTGCATTTGCAT------TTAAATCTGGTCCAGTATAATTTCCGTCAATTTCGGGTCCTTTTACATTTGGT------AGACTCATTTTAGGCTCTTTTAGTTTGGGAATTTTTAGTTTTCCTTTGGGTGAACCAGAGATATTAAATTCAGGTGATTTCATGTCCAAATTTGGGCCTTCAAACTTTGGGGCAGAAAGGTCAAAAGCGGGTGGATTAAAATTTGGTTTGGGGTATTTTGCAGATGCACCAGATATAGCAACATCTGGCATTTCTAAATTAGGTTTTAATCCTCTGATGTTTGGCA----CATCTACATCAACATCAGGTGCATT a score=-656 s mm6.chr19_random 1238240 258 + 9870477 GATGTCCATTTTGGGACCTTTGATGTCAACCTCTGGGCCTTTGAGATCACCTTCCACTTTGGGCAGGGAAACATCTACATCACCCTTCACTTTGGGACCCTTAAGATGTAAATCTGGCATGGAGATCTTTGGAGCCTTGATGTTCATCTCAGGCATCTTGAACTTAGGACCCTTC-------AGCTTTGCATCTGGACCTTCAATATTC--------------------------------------------------------ACATCAGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCATTGGG s fr1.chrUn 204505448 293 - 349519338 CACATCCACCTTTGGGGCTTTAATGTCTATGGCTGGTGTATCCAAAT------------------GGGGAGTATCAGTATCACAATTTATGTTTGGAGCTTTTAGAGTCAAATCTGG--------TGTCTGAAGACCAG-TGTTTATATCTGA-ATATGGTCCTTGTGGTAATTTGCCTGAAAGATCTACTTTTGGAAATTTGGGACTATGAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGAGGAACACTGAGGCTGACACTGGGCTGATTAATATTCATGTTTGGACCACC a score=3921 s mm6.chr19_random 1238498 188 + 9870477 CAGGTTCACATCTACTTCAGGGCCTTCTCCCTTGAAGCCAGGCATGCTGAACTTGGGCATTTTTATTTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGGACATCCACATCTGGAACATCAATGTCCACTTTGGGGCCTTTGATGTCAACTTCAGGAACTTTAATCTCACCTTCCACTTTGGGCAGAG s fr1.chrUn 204504617 182 - 349519338 TAGATTTCCATCAATTTCAGGTCCTTTT------AGGCCTGGAAAACTAAATTTAGGAAACTTCAGTTTGGGCATTTTAAATTTTGGCTTTGGTGAACCAATGTTGACATCTGGACCATTCGCATCTAACTTAGGACCATGAACATCCAAGTCTGGAGTGTGGAACCCTGCCTTTGGTTTAGTCAGAG a score=1904 s mm6.chr19_random 1238763 410 + 9870477 ATGTTCATCTCAGGCAT------------CTTGAACTTGGGGCCCTTCAGTTTTGCATCTGGCCCTTCAATGTTCACATCAGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAATGTCAGCCTTGGGCAAGTTCACATCCACTTCTGGGCCCTCTGCT-TTGAAGCCAGGCATGCTGAACTTGGGCATTTTCATTTT------GGGCATCTTCAGGTGCCAGTCTGGGCCCTG------------------------------------CACGTCCACATCTGGAGCATTGATATCCACTTTGGGACCTTTGATGTCAACCTCTGGGCCTTTGATGTCACCTTCTACTTTGGGCAGAGAAATATCTACATCACCCTTCACTTTAGGACCCTTAAGATGCAAATCAAAGTCAGGCATGAGAGATCTTGGGAGCCTTGATGTTCATCTCAGGCATTTTGAACT s fr1.chrUn 204505883 361 - 349519338 ATGTTCATTTCAGGGGTGTGAGTTTCACCCTGAAATTTTGGAGCATTTAGATTCAGATGTGGTGATTTAAGATTTGCACC---------------------------------------------------------TACATCCAAATTTGGTCCTTTTGGTAATGAA-------AGATTGGATTTAGGCAGTTTTACTTTACCCGAGGGAGCATTAAAATCCCAGTCTGGACCATGAAGCTCTGGCATTTTCAATTTACCTGATGTCATATCTACATCAAGTTTGGGGGCATTGACGTTCAGTTTGGGACTTTTGTGGTC-ACCTTTGGG-----------------TATTTTTATAACTGGTGCATTTATACCACTACTTACATTAGGACC------AGAGATATCTAAGACAGGT----------------GATTTAAGATCCAGGTCAGGGCTATCTAAAT a score=2083 s mm6.chr19_random 1239173 79 + 9870477 TCGGGCCTTTCAATTTGCCCTCTGGTCCTTCAATCTCAATGTCTGGCCTGCTCATGTCCACATTTGGCCCTTTGAGGTC s fr1.chrUn 204504799 79 - 349519338 TTGGCATTTTCACTTTACCTGATGGCATGTCTATGTCAAGGTTTGGGGTATTTAAGTCAAGGTTGGGGCTTTTAAGGTT a score=173 s mm6.chr19_random 1239540 474 + 9870477 AACATCAGGCATGGAGATCTTGGGGGCCTTGAAGTGCATGTCAGGCATCTTAAATTTGGGGCCCTT----CAGCTTCCCTTCTGGCCCTTCAATATTCACATCTGGAACATCAATG---------------------TCCACCTTGGGTCCTGAGACATCAATGTCAGCCTTGGGCAAGTTCACATCCACTTCTGGGCCCTCTGCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCATCTTGGGCATCTTCAGGTGCCAGTCTGGGCCACGCACATCCACATCTGGGGCATTGATGTCCACTTTAGGGCCTTTGATATCCACATCTGGCACTTTCATCTCACCTTCTATCTTGGGCACTGTCACATCCATGTCCCCCTTGACTTTGGGGCCTTTCAGATGCAAGTCCACATCAGGCATGGAGATCTTAGGAGCCTTGAAGTGCATGTCAGGCATCTTGAACTTGGGGCCTTTCAACTTTGCATCAGGACATTCCAG s fr1.chrUn 204504878 327 - 349519338 AACATCTGGCATTGCAAT-----------------------------------ATTTGTTGTATTTAGTCCACTATCCATGTTTGCACTTAA--ATCGACATCTGGCATTTCAAAGCTAGGTTTTTTCCCTTTCAGTTTCACATTGGGT------GCGTCAAAATGTGGCATGTCAAAGTTTCCATCAAATTCTGGTCCCTTTATATTT------GGCAGATTAACTTTAGGCATTTTCAATTTTGGCATTTTGAGT---------------------TTTGTTTTAGGTGAACCAATGTTGACATCTGGACCCTTCACATCAAACTGTGGAGCTTTTAGGTC---------------------------------------------GGGAGATTTGAG---------------------------------------------------------CTTCAGATTAGGGCCATCTAATTTTGGACCAGAAAACCCCAG a score=-1875 s mm6.chr19_random 1240057 308 + 9870477 TCTCCCTCTAATTTTGGC---ACTGTCACATCCATGTC---------------CCC------CTTGACTTTGGGGCCTTTCAGATG---CAAG------TCCACATCAGGCATGGAGATCTTAGGAGCCTTGAAGTGCATGTCAGGCATCTTGAACTTG--GGGCCTTTCAACTTTGCATCAGGACATTCCAGATCAACAT---CAGGTACTTCCACATCCACACTTGGGCCTTTTAATTCTCCCTCTAATTTTGGCACTGTCACATCCATG---TCCCCCTTGACTTTGGGGCCTTTCAGATGCAAGTCCACATCAGGCATGGAGATCTTAGGAGCCTTGAAGTGC--AT s fr1.chrUn 204507545 338 - 349519338 TTTGGCTGAAATTCTGTCTTACCTGAAATATCCAGGTCTAAATCAGGAGATCTCCCAGAAAGTTTGACCTTTGGTAATCCCACATAACTCGAGGGATCATCTATATTTAGCACCGGGGTTTTCAGTCTCTTG-----------AGACTTTGTTTACCTGAAGGGACACTTGGTGTTGTGAGGTCATATTCTGGACCACTGTAAGAAGGCCCTGAAAAGTCCAGGTTTGGCATTTTCACTTCTTTCTTTGTACCTTCAATTTGTACTTTGGGGGAATCTGCTCCAAAAGTGCTATTTTCCTCATCAAAGATCATCTCTAATTCAGGGGCTTCAGGA--CCTGAACCTCTAAT a score=1243 s mm6.chr19_random 1240365 33 + 9870477 GTCAGGCATCTTGAACTTGGGGCCTTTCAACTT s fr1.chrUn 204505205 33 - 349519338 GTCAGGCAGATTTAAGTTTGGCATTTTTAATTT a score=-1100 s mm6.chr19_random 1240398 176 + 9870477 TGCATCAGGACATTCCAGATCAACATCAGGTACTTTCACATCCACATTGGTCCCT----TTG--ATGTCAACTTGAGGGCCTCTGAGATCAGCTTCCATTTCTGGCACAGAAGCATCTATCTCTCCTTTCAGTTTGGGCCCCTTAAAATTCAAGTCCACATCGGGCATAGAGATCTTGGCGG s fr1.chrUn 204507913 152 - 349519338 T---CGAGAGGAATCCAGTCCTATTTGAGTTCTTTCAAGATTTGGCTTAGTTTTTGGAGTTGCAGTGTTGACTTTTGGATCTTCAGCTCCAGCT---ACGTTCAGGTCAGGAGCATTAAGCTGTGGT----GTTTGGGCA---------TTGACTTTAAGTGGAGCATG-----------AG a score=2112 s mm6.chr19_random 1240574 510 + 9870477 CCTTGAT-ATTCAACTTAGGCATCTTAAATTTGGAGCCTTTCAGTTTTCCTTCTGGACCCTCAATATCTAAGTCAGGAACATCAATGTCCACTTTGGGTCCTGAGACATCAATGTCAGCCTTGGGCAGGTTCACATCCACTTCAGGGCCCTCTGCTTTGAAACCAGGCATGCTGAACTTAGGCATTTTCACCTTGGGCATCTTCAGGTGCCAGTCTGGGCCACGCACATCTACATCTGGGGCATTGATGTCCACTTTGGGGCCTTTGATGTCCACATCTGGAACTTTCATTTCACCTTCTATCTTGGGCATTGTCACATCCATATCCCCCTTGACTTTGGGGCCTTTCAGATGTAAATCTACATCAGGCATGGAGATCTTAGGAGTCTTGAAGTGCATGTCAGGCATCTTAAACTTGGGACCCTTCAGCTTCCCTTCTGGACATTCAATATCAATATCACCAACATCCACATCAACTTCAGGACCCTTC---AATTCTCCC------TCTACTTTTGGAA s fr1.chrUn 204505238 380 - 349519338 CCCTGATGATCCAACACCAACATCCGACATGTCCAAA---TCAGTTTTAC-----GACTCTCAAAATCTAGGCTGGGTGCATTAATATCCATGTGTGGACC------------ATCAACACTG---------CCATTAATGTCAGGGCC------TTTTAGACTTGGAAGCTCAAACTCCGGCATTTGGATTTTGGACATGCCTAATTTTGCTTTAGGTGAACCTATGTTGACATTTGGAGCATTCACATCCACCTTTGGGGCTTTAATGTCTATGGCTGGTGTATCCA-------------AATGGGGAGTATCA-----GTATCACAATTTATGTTTGGAGCTTTTAGAGTCAAATCTG----GTGTCTGAAG-----------------------------------------------------------------------------------ACCAGTGTTTATATCTGAATATGGTCCTTGTGGTAATTTGCCTGAAAGATCTACTTTTGGAA a score=1019 s mm6.chr19_random 1241086 142 + 9870477 GAAACATCTACACCACTTTTCAGTTTAGGTCCTTTCAAATTAAGCCCAACATCAGGCATAGAGATTTTGTGTGTCTGTATATTCATGCTTGGC------ATCTTGAACTTGGGACCCTTTAGTTTCCCTTCTGGCCCTTCAATATTCA s fr1.chrUn 204506735 139 - 349519338 GGAACATTGACGTTACCATCAAATTCAGTTGTTTTAAGGCTTGG---AGCATTTGATTGAGGCATTTTAAATTTAGGTACTTTTGTCTTTGGCGAACCAATGTTGATTTCTGGTGTTTTAAGTTCCATGTTTGGT------AAGTTCA a score=2852 s mm6.chr19_random 1241228 196 + 9870477 CATCTGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAATATTGGCCTTTTGAAGATTCACATCTACTTCTGCACCCTCTCCTTTGAAGCCAGGCATGCTGAACTTAGGCATTTTGACCTTGGGCATCTTCAGGTGCCAGTCTGGGCCATGAACTTCCACATCTGGTGCCTCTAC------TTTAGGACCTTTGATGTC s fr1.chrUn 204505686 196 - 349519338 CATGAGGAACACTGAGGCTGACACTGGG--CTGA----TTAATATTCATGTTTGGACCACCTAAATTTCCATCAATCTCAGGTCCTTTTAAGCTTGGAAGACTAAATTTAGGTACCTTAAATTTTGGCATTTTAAATTTTGCCTTTGGCGAAGCAATGTTGAAATCTGGGGCCTTCATATTCAGTTCAGAAGTTTTAAGGTC a score=2863 s mm6.chr19_random 1241541 288 + 9870477 TATGTTCATTTCTGGCAT------------CTTAAATTTTGGACCTTTTAGTTTTGTATCTGGACCTTCAATATTTACATCTGGAACATCGATGTCTACCTTGGGTCCTGAAACATCAATGTTGGCCTTGGGGATGTCTACTTCTGGACCTTCTCCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCACCTT------GGGCATCTTAAGGTGCCAGTCTGGGCCATGAACCTC---------------AACATCTGGAGCATCAATGCCAACTTTGGGTCCTTTAATGTCCACATCTGGCACTTTTAC-TCCACCTTC s fr1.chrUn 204505882 264 - 349519338 CATGTTCATTTCAGGGGTGTGAGTTTCACCCTGAAATTTTGGAGCATTTAGATTCAGATGTGGTGATTTAAGATTTGCAC---------------------------------------------------------CTACATCCAAATTTGGTCCTTTTGGTAATGAAAGATTGGATTTAGGCAGTTTTACTTTACCCGAGGGAGCATTAAAATCCCAGTCTGGACCATGAAGCTCTGGCATTTTCAATTTACCTGATGTCATATCTACATCAAGTTTGGGGGCATTGACGTTCA-GTTTGGGACTTTTGTGGTCACCTTT a score=3039 s mm6.chr19_random 1241977 247 + 9870477 ATGCTCACATCTGGGGCCTCAATATCA------ACTTTGGGCCCTGAGACATCAATGTCAGCCTTGGGCAGATTCACATCCACTTCTGGGCCCTCTGCTTTGAAGCCAGGCATGCTGAACTTGGGCATTTTCATCTTGGGCATCTTCAGGTGCCAGTCTGGGCCCTGCACGTCCATATC------------TGGAGCATTGATGTCCATTTTGGGACCTTTGATGTCAATGTCTGGGCCTTTGAGGTCACCTTCCACTTTGGGCA s fr1.chrUn 204506150 259 - 349519338 ATTTTTATAACTGGTGCATTTATACCACTACTTACATTAGGACCAGAGATATCTAAGACA------GGTGATTTAAGATCCAGGTCAGGGCTATCTAAATTTGGACTAGAAAGCCCCAGGTCAGGTAAGCTCATGTTTGGCCTCTTGAATTTTCTTGATGGCCCAGCAACATCAACATCCAGGTCACCTTTTGGACCACTCAGGTTAATTGAGGGTGTTTTTGCATTCAAATCTGGTCCATTGAGGTTTCCATCAATTTCAGGCC a score=2568 s mm6.chr19_random 1242224 207 + 9870477 GGGAAACATCTACATCACCCTTCACTTTGGGACCCTTAAGATGTAAATCTGGCATGGAGATCTTTGGAGCCTTGATGTTCATCTCAGGCATCTTGAACTTGGGGCCCTTCAGCTTTGCATCTGGACCTTCAATATTCACATCAGGAACATCAATGTCCACCTTGGGTCCTGAGACATCAAGGTCAGCCTTGGGCAGGCTCACTTTTG s fr1.chrUn 204507237 168 - 349519338 TAGCGACATCGACATC---------------------------TGTAGTTTGCATGTCAATTTTTGGCAAATCGAATTT------AGGCATTGTGAACTTGGGAGCCTTGTATTTTATTGATGGACCTTTAAGAGCAGCTGCTGGAGTATCACTTTGCAACTTTGGCCCT------TTTAGGTCAGCCTCAGATACATTTATATTCG a score=2552 s mm6.chr19_random 1242440 46 + 9870477 CTTTGAAGCCAGGCATGCTGAACTTAGGCATTTTCATCTTGGGCAT s fr1.chrUn 204506409 46 - 349519338 CTTTAAAAGTTGGCAAACTAAATCTAGGCATTTTTATTTTGGGCAT a score=1742 s mm6.chr19_random 1242533 107 + 9870477 TGTCCACTTTAGGGCCTTTGATATCCACATCTGGCACTTTCA----------TTTCACCTTC-----TATCTTGGGCAC---------TGTCACATCCATGTCCCCCTTGACTTTGGGGCCCTTCATGTTT s fr1.chrUn 204504916 128 - 349519338 TATCCATGTTTGCACTT---AAATCGACATCTGGCATTTCAAAGCTAGGTTTTTTCCCTTTCAGTTTCACATTGGGTGCGTCAAAATGTGGCATGTCAAAGTTTCCATCAAATTCTGGTCCCTTTATATTT a score=1423 s mm6.chr19_random 1242708 160 + 9870477 CTTCAGCTTTCCTTCTGGTCCCTCAAGGCTCACATCTGAGGTTTCAATGTCAAGTTTAGGTCCTGAGACATCAATAGTAGCCTTAGGCAAGCTCACATCCACATCTGGACCCTCACCTTTGAGAGTAGGCATACTGAACTTGGGCATTTTCATCTTTGGC s fr1.chrUn 204506455 136 - 349519338 TTTCATTTTTCCTTTAGGTGACCCAATGTTGACATCAGGAGTGTCTGCATCTAATTTTGG---AGGATTGTATATTATAACATTTGA------------CATATCTAAACGGGGAGCTTTGAAATCAGT---------TTTGGGTGTTTTCCCCTCTGTA a score=2139 s mm6.chr19_random 1242979 1214 + 9870477 GCAGACATGTCTAGATTTCCTTTCATTTTGGGTCCTTTGAGATCCAGATCCACATCTGGTAGAGACACCTTTGGAGCCTTGAAGTGCATCTCAGGCATCTTAAATTTGGGGCCTTTCAACTTCCCTTCTGGTCCCTCAAGGTTCAGATCTGGAGCACTAATATCTAGCTTTGGTACAGAAATGTCCACATCAGCCTTGGGCATGTTCACATCCAACTCTG---------GGCCTTCACCTTTGAGACTAGGCATGCTGAATTTGGGCATTTTAATCTTTGGCA--------------------TTTTCAAGTTCCA-GTCGGGACCATGAACATCAACATCTGGAACACTGACATCTAC--------TTTGGGGCCTTTCAAGT-----------------------------------CTCCTTCCAGCTTTGGCATTGTGACATCATATTCTCCTTTAACTTTGGGGCCTTTCATATGCAAATCCACATCAGGCATGGATATCTTTGGGGCCTTGATGTTCATCTCAGGCATCTTCAGCTTAGGACCCTTCAGCTTTCCTTCAGGTCCTTCAATGTTCACATCTGGAACTTTGACATCCACATTGGGTCCTGAGACATCAATGTCAGACTTTGGGAGATTCACCTCCATTTCTGGGCTCTCTGCCTTGAAGCCTGGCATGCCAAACTTGGGCATTTTTATCTTGGGCATCTTCATATGCAATTCAGGACCTTGAACATCCACATTT------GGAACATCAATGTCCAGTTTAGCACTTTTAAGTTCAACATCAGGAACTTTAATCTCACCTTCTGCCCTTGGCACTGTGACATCATATTCTCCCTTTACATTGGGGCCTTTTAAGTGTAAGTCCACATCTGGCATGGAGATCTTTGGAGCTCTGATATTCATTTCAGGCATTTTAAACTTATGCCCTTTCAACTTCCCTTCTGATCCTTCAATGCTTACATCTGGAGCACTGACTTCCACCTTAGTCCCAGAAATGTCAAGGTCAGCCTTGGGCAGGTTCACATCC---------------------ACTTCTGGGCCCTCTGCTTTGAACCCTGGCACACTGAATTTGGGCATTTTCATCTTGGGAATCTTCAGGTCTGGGCCATGAACATCCACTTG-TGGGGTGTCAATGTCCACTTTGGAGCCTTTCAGTTCCCCCTCAAGCTTTGGTGGTGTTACTTCATAC---------------------TCTCCC-------TTCACCTTTGGCCCTTTGATAT---------GCAGATCCACATCAGGCATAGAAATCTTTGGAGTCTTGACACTTACTTCA-------GGAAGATTAATGTCAGG s fr1.chrUn 204506591 1122 - 349519338 GCATTTATACCACCACTGAGGTTTATTTTGGGGCC------------------ATCTAAT---------TTTGGACCAGAAAAGCCCAGATCAGGCTTCCTGAA---------------CTTTCCTGATGGTGTGGCAACATTAATATCGGGAGCATTGAAATTGACACCGAGTGCATTAACATCTGGAACA---TTG---ACGTTACCATCAAATTCAGTTGTTTTAAGGCTTGGAGCATTTGATTGAGGCATTTTAAATTTAGGTACTTTTGTCTTTGGCGAACCAATGTTGATTTCTGGTGTTTTAAGTTCCATGTTTGGT------AAGTTCACATTTGGAGCATCAA-ATCCACCCTTTATCTTTGGTGTCTTCAAAGTGAAGTCTGGAGACTTAAGATCTGTTTTTACATCCAATCCTTTACCCTTTGGTAATGTGCCTGAAAGGTCT-----AACTTTGGA-CTTTTGACTTTCATATCAGGAATGTCCATATTTGTCTTTGGGGATTTCATCTTAAGTTCTGGTGTGGTCATCCCTG------------------------------------------------------------------------CATTAATGTCAA-------------CACCTTCCTTATTAGGTACTGCACCAAAAAGCTTG--------AATTTTGGCAACCTAAGCTT------------------TCCAGAGGCATCAAGGTCCAATTTTCCAGAAGGCTTATCAAGGTCTAGTTTTGT---------TTCAACACCAGGAAAATTCATGTCTCCTTTAAATTTAGGGCTAGCGACATCG---------------------------------ACATCTGTAGTTTGCATGTCAATTTTTGGC------AAATCGAATTTAGGCATTGTGAACTTGGGAGCCTTGTATTTTATTGATGGACCTTTAAGAGCAGCTGCTGGAGTATCACTTTGCAACTTTGGCCC------TTTTAGGTCAGCCTCAGATACATTTATATTCGGTGCCCGTATCTTCCCTTTTACTTTTGGGCTTTCAATGCTCAAATCAGGTGT-TTGAACATTAGCATTTCCTTTGCCTGAGACCCCAAATTTGGGTAGAGTTAGTTTACCAGATGGGGCATCAATG------ATTGGTCCATTTAAATTTGGCTGAAATTCT----GTCTTACCTGAAATATCCAGGTCTAAATCAGGAGATCTCCCAGAAAGTTTGACCTTTGGTAATCCCACATAACTCGAGGGATCATCTATATTTAGCACCGGGGTTTTCAGTCTCTTGAGACTTTGTTTACCTGAAGGGACACTTGGTGTTGTG a score=421 s mm6.chr19_random 1244193 131 + 9870477 GCCTTTAAGTTTGCCACCCAGACCCTCCATGTTGACGTTTGGAGCTTCTACATTGACCTTAGGCCCCGAAATACTAATATCTCCTTCGGGCAGAGTAACATTTACATCTAGGCCTTCTCCTTTGACTCCTG s fr1.chrUn 204508018 101 - 349519338 AGCATTAAGCT--------------------GTGGTGTTTGG-------GCATTGACTTTAAG---TGGAGCATGAGTCCCAAGTCCCAACGGAGGAAGGTTCAGATTGCTGCCATATGTTGTGTCTCCTG a score=990 s mm6.chr19_random 1244347 18 + 9870477 AAATTCCATTCTGGACCA s fr1.chrUn 204507713 18 - 349519338 AGGTCATATTCTGGACCA a score=977 s mm6.chr19_random 1244564 176 + 9870477 CTGTCAAGGTCCCC-------TCTAAGTTTGGTGTCTCTATGTCCACTCTGGAGCCTTTAACTGCCATCTGAGGG------CCTTTAACATCACCTTTCACCTCAGGAGCAGATGTCTTCATATTTCCTTTCA--GTTTACAGGACCCCAGGCTCAGATCCACATCCTGCAT---GGAGATTTTAGGTTTCTGG s fr1.chrUn 204507731 187 - 349519338 CTGTAAGAAGGCCCTGAAAAGTCCAGGTTTGGCATTTTCACTTCTTTCTTTGTACCTTCAATTTGTACTTTGGGGGAATCTGCTCCAAAAGTGCTATTTTCCTCATCAAAGATCATCTCTA-------ATTCAGGGGCTTCAGGACCTGAACCTCTAATGTCCATCTTAACTGTAGGAGCTTTTAAATTTCGAG a score=1902 s mm6.chr19_random 1244814 156 + 9870477 ACTTACATC---CCCAGAGAC-CCCAGGAAGGGTCACTTCACCTGTGGGCAGTGCCACATCAAGGCCAATCCCCTCTCCCTTTGAACCTGATGCAGAGAACTTAGGGACTTTCATCTTGGGCATATTCAGTTTGCCCCCTAGCCCATGAACATCAACATC s fr1.chrUn 204506179 144 - 349519338 ACTTACATTAGGACCAGAGATATCTAAGACAGGTGATTT----------------AAGATCCAGGTCAGGGCTATCTAAATTTGGACTAGAAAGCCCCAGGTCAGGTAAGCTCATGTTTGGCCTCTTGAATTTTCTTGATGGCCCAGCAACATCAACATC a score=-1717 s mm6.chr19_random 1245026 488 + 9870477 AGGCATCCATTCCTAT----GTTCCCTTGCAGCTTGG-----------------------TACCTTTCAG-------GCCTAAGTCACCTTCAAGTGATGGCCCAGTGATCTGGGGACCCTTCAGTTTCCCCTCAAGC----------CCCTCAATATTGACAGAGGAGGGAT----TTACTTCCAGGTGAGGAGCCTGGATGTTTCCCCCAATAGCCAAG--CCTGGCTTGTCACCCTTGTGT------------------CCCACAGAGGATTCAGG--TGCAGAAACACTCAGCCCTACCTCTG--GAATCTGGCCATCCAGACCTGCGGAGACACCAAATTTTGGCACCTTCATGGTAGGAATTT-TAATTTTCCC-AATATCACCACTCTGGAGGGATGGGGCCTGTACCTCTACTGAGCCAGCCCCAAGAGA-------------------AGACGAAACGTCTACTCCTGGAACTCGGATCCCTCCTTTGCCACCCAAGTCCAAGCCTTTTGCTTTGACATTGACATCTAGGCTTCCCACCT-TTGCCCCAGG-----CACAGTGACCTGGAATTTTGAG s fr1.chrUn 204507918 567 - 349519338 AGGAATCCAGTCCTATTTGAGTTCTTTCAAGATTTGGCTTAGTTTTTGGAGTTGCAGTGTTGACTTTTGGATCTTCAGCTCCAGCTACGTTCAGGTCA-GGAGCATTAAGCTGTGGTGTTTGGGCATTGACTTTAAGTGGAGCATGAGTCCCAAGTCCCAACGGAGGAAGGTTCAGATTGCTGCCATATGTTGTGTCTCCTGCGTCTCCTGTATCACAAAGGTCCTCACTCGGTGGCCTTGTTTTCAAGAAACCAAAATCAACCCCAAGGCGAGGCAAGCCTGCGGCATGCTTCAGCCTGACCTTGGATGAGCCTGGTGTTGTTGATTTGCTGTTGC------TTTCTCCATCTGCAGAGGAAGCCTCTGTGATTCTCATGAACTTCTTGATTTTGGCATTGTAGAGTTTATTGTAAGAATCAGTCAGCATCTGGAAACATAAGGGATAAGTGACTGAAATGGTTTATCATCTGCTGTAGACTGCAGCCCT---------CACCAGTTCAGAAGCATTGTTATGTTATAAATAT----GTGTTCCACCTACTGTCTCAGGACTGACACACTGGTCCAAATTTCCAAG a score=2665 s mm6.chr19_random 1245514 544 + 9870477 TGGCCAGCACCTTCAAGCTC-----TGGTCCTGAAGCAGAAATGGCACCTGCCCGGATATCCACAGCAGAGCCTGTGGTTGGAGAGGCTGGCCCGGATCCCGAT--GGCAGTCGGATCACC----GTTTTCCCTGGCTGGGTTTCCACATCTGTGTTGGAGATTTCAGTCACTTCATGCCTTGGTATCTTGATCATGAACTCAGGGCTGGTGATGTCAATGTCCTTCACTCCTTCCCGACCGGTCACATCCACAGTGTAGGCTGTAACCCTTC---------TAGTCACTGTGATG------------GTGCGGCTCTGGGTCTCC---CCAAGGTCCCCTTCTACTCCA---TCCTCCGACCTCAGGCGTGGCTTGATCTTCGTGGTGTAGATGCGCTGGTAGTCCTCATCATCCCCGCTCTGCAGAAAGACATG------CCCG-----GCAGAGGTTGCAG-----CAAAGCCTGCCTGAA----------TCAGCAAATGCCCGGCTGCAGTCCAGCCAACAACAGGGTTGCCTGG-------TTCCCAAAGGTGCTCAGACCATAACAGAGGTCTAGAGAGCCTCCTGGGGCAGAACACAGGGCACTGAA s fr1.chrUn 221057420 563 - 349519338 T------CTCTTTCAAGCTAACCTGTGGTCCAGCGTGAGAGATATTACTTGAATCGAAAACC------------------------------TCGGTTTCTGATACGGCAGCCGTTTTACCTGAAGGGCTCCCATGCAGAATTCTCACTCCAGGAGAACCATCTCCAGAC---TCATGCCGTAGCCCTTTTACA------TCAGGGCTTGAAAGTTCGA-GTTCCTCACTTATGCC--ACCAGGCATTTCCACGGTGTATGTAGTGATGCGGCGAGTGATGGTAGTTATTGTGCTGCCATCGCTGCTGGTGCTGCTGTGCCGCTCTGTGCGAACGTCGACTCCCTCAGCAAGGTCTTCAGACTTCAGCCTTGGTTTGATCTTTTTTGTGTATATTCTCTTATACTCCTCGTCATCTCCACTCTGATGACAGATAGGAGGTGTCTCGTATTAGAAGAGGATATGAAGGCTCAGAGACTGACAGAAAACACACTACACACTAAACACACTATT-CTGTGGAACTTACCAGAAGAATATCTGGACTGGAACTCCCAAAGCGGGTCCTTCCCTCCCAGG---TCAGGGTGCCCATTGGAGAACGGCATGGTGTACTCAA a score=428 s mm6.chr19_random 1246791 8 + 9870477 CAGGGGAA s fr1.chrUn 221057994 8 - 349519338 CAGGAGAT a score=2892 s mm6.chr19_random 1246830 218 + 9870477 CAGTGTGATGCCCCATGGTATTCAGCAACTGGGTCACCTCACCAGACTGCAGGTTGTCAAAGTAGATGGTGGCACCCACAATCTGGTCCCCTAAGTAAGGGAGTACAACAATCAGGTAAAGACCCACAGGTCTCAAGAAAGCACCACATAACAGCCACTAAAACTGACTTTCCTTTAGCTTCACGAACACCACACAGACATAGTATTGCCCATTCAAG s fr1.chrUn 204508526 195 - 349519338 CATTGAAAGGCTCCATAATTTTGAGGACATGAAGCACCTCCTCTTTTGATAGTTGCTCAAAATTGATGGTTGCTCCCAAAATTTCATCCCCTAAAGAAGAAA--AGGACAATTTGTAAA--------------CAAAACAGCTTGAAACATCA-TTAATAAATCTGA------TGAAGATGAATAAAGACCCCACAGAAATAGTATCGTGTTTTAAGG a score=3990 s mm6.chr19_random 1247333 241 + 9870477 ACTCACCCTCCTTGACCACCCCAGTGCGGGCCGCAGGGGAGTTCTGCATCACCTCCTGAACAAAGA---CTCCATCATCCCTCTGGGCAATGGTCAGCCCGTGGGAACCACTGCCCTGCCAGTTGGGCAGCAGCAGCTCCCGGGTTGTCTCTTCCTCCTTCTCCATCTGGGATGAGATGAAAGAACAGAGCTCTAGTCATGGGGACATGGAGAGTAGTATGGTATATGAGAGAACCAGATATCT s fr1.chrUn 221058247 227 - 349519338 ACCTACCTTCATATACTTTTCCAGAGCGTGCCGCTGGTGACTCTCCTCTCACTCCTCTTACAAAAATCTCCCCCTCACTCGTCTGTTCAATGGTCAGGCCAGTCTCGTCCGCACCCTTCCAGTCTGGAAAAAGAACCTCCCTGGTT---TCTTCTTCTTCAGCCATCTGGG--TAGATGACACAATAAA-----------TGGGAATTACAGAGGAATA-AAAAAAGAAAGGAACAAAAGATCT a score=1175 s mm6.chr19_random 1249028 209 + 9870477 AGGTCGTTACCTCCCAACACTCATGCATCCTCTAGACCTTTATTAAACGCACTCCCTATGCCAGATATGGAAATTTAAAACACTTGAGTCCCATCTCCATACAAATGATAAACAA--GGGACTCTGGGTGTGGCTAACTGGGCTCCACAATGTTCCAGA-AGTCTTA--------AGAGGCATCTCGGGGAATGAAATATAAATGAGGCTTCCAAGGTGC s fr1.chrUn 204514368 213 - 349519338 AGGTGGTTTCATTTAAACGCACATACCTCCCCCA------TCTCACCCCTCCTGCCTCTTACCCATTCTGTAGACCACATCGCTGAGGTGACA-CTGCATCAGGACGTCCAGCAGCTGCGGGTCCGAGTGACGCCCACACGGGTCCAGATTCTCCCGGATGGTCCCACTGAATAGGAAGGGATCCTGGGGAATGATGGCTAACCTGGACCTGCAGGGTGC a score=5737 s mm6.chr19_random 1675033 372 + 9870477 TTCTGTCTCTTCAGTTAGATCACAGACTCC-TTCAGTATAGGGGTTATAGCAAATTTCTTGTTGTGTTACCTTGTATTTTCTTCTTATATTCATGGTTTTAATTTAAAGCTGCTCTGTGGTCAATAAATTGATATAAATCCATACTTTGAAAATTTTGGCTAGATCAAAAATTGTTTATAAGGAATTTATATAGGATAGAATTTTATAAGTAACTATGGATtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtAGAACACACTTTATACAGAAGAAACAAACACATCTTTTAACTTCCAGGAAtgtatgtgtttatatgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg s fr1.chrUn 186520964 253 - 349519338 TTATGTATCATTAATTTATTTAAAAACGAGGTTTACTATTGGGTTTATTTTAAGACATCTCTTATGTTTCCTAATTTCTTCTGCTTAATTACATTGTTTAAATTC-----------------------------------------------ATTTT-------TCAGAAAAAGTTCATCAAAAGTTCA--------ACAAAATTAAAGCAAAACAGAGACCATCCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt-------------------------------------------------gtgtgtgtgt---------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg a score=1579 s mm6.chr19_random 2667286 500 + 9870477 actgagctaccttgccagctcTT--ATAATCGCAGCACTCCACAAAGTTCCCTGCGCCCCTTCTCAGTGCCTGTCGACTCCCTAGCCCAGCCTGCCCTTTCTGAACTTTTCATAAGGGAACCATTCAGTGTGTGCTCCCTGGTCAGTGTGTGCTCCCTGGTC----TGTGTGTTCTCATATTCAGTGTGT--GCACCCTAGTCAGTGTGTGTTCCCCGGTC------------------------TGTGTGTGCTCACATTCAGTGTGT--GCTCCCTGGTCTGTGTGT--------------------GCTCCCTGATCAGTGTGTGCTCCCTGATCAGTGTG--TGCTCCCTAGCCTGTGTGTGTTTCCTGGTC----TGTGCGTGC---------------------------------------------------------------------------TCCcattcagggtgtgctctttacccaaggcctct-tgctctg---------------cagtgatcctgaggcttgttcctgctctggtgtcccagttgctgggtctaattactgcagagtagtagctctttgtggttaaaccatacttcatgtatcca------ttctccttggaactgtgtctgacttctg s fr1.chrUn 284698684 617 + 349519338 ACTGCATTGATCCTCCAGCCTCTCAGTAGTAGAAGCTCTGATCAGGGTGTCCT-----CCTGATCAGGG--TGTCTGTCCTCCTGATCAGAGTGTCTGTCCT------------------CTGATCAGGGTGTCTGTCCTGATCAGGGTGTCTGTCCTGATCAGGTTGTCTGTCCTCCTGATCAGAGTGTCTGTCCTCTGATCAGGGTGTCTGTCCTGATCAGGGTGTCTGTCCTCTGATCAGGGTGTCTGTCCTCCTGATCAGAGTGTCTGTCCTCTGATCAGGGTGTCTGTCCTGATCAGGGTGTCTGTCCTCTGATCAGGGTGTCTGTCCTGATCAGGGTGTCTGTCCTCTGATCAGGGTGTCTGTCCTGATCAGGTTGTCTGTCCTCTGATCAGGGTGTCTGTCCTGATCAGGGTGTCTGTCCTCTGGTCAGGTTGTCTGTCCTCTGGTCAGGTTGTCTGTCCTGATCAGGGTGTCTGTCCTGATCAGGGTGTCTGTCCTCTGGTCAGGTTGTCTGTCCTCTGGTCATGGTGTCTG-TCCTGATCAGG-------GTGTCTGTCTCTGAT-----CAGGGTGTCTGTCCTC--TGGTCAGGTTGTCTGTCCTCTGGTCAGGTTGTCTGTCCTGATCAGGGTGTCTGTCCTCTG a score=3755 s mm6.chr19_random 2828493 472 + 9870477 gcgcgcgcgcgtg-gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtctttcattcgtgaatcttgggcgggtgcaggggggggcgacttgctgggagccaaagcagactaactattcaccagtacaG-GACATCACCTAGTTTCCTACCATGAAGTTGAGATGCCCATGTTTCAGCCTCCTGGGTGTAGGGTTGACAGGTGTACAGAACCAAGTACTTCCATTTACTTTTTAA-----AATATccctcttctgagctctgctcatagttccccttttcacaaaggtctttcctgatcatcccattttaaatGAGCCTCCTACTGTTTTCCCTTCCTTTACTTAGCCTTCTGATAATGTATTCATTTATTTGATTATTGTCTGTTTCCTCTGCTTTATCGTCCTCAGCACTTTTAATATCTGGCACTAGGAACACAAATAAT s fr1.chrUn 245215633 410 - 349519338 gtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTCTGCATCTATATCCTGTCCTTGCAGCCTGTCCCTGGCTGCACCA-TCGGAGGCAGCTGATGCTATCTCAT-----GTCAGTACTGTGGCAGCTCCTG-----CTGCGAATAATCAAAGACAGCTGTTTGGAAAATACC-------AGAGATGCCTAATAGGAAGCACTGACGGCCTGGATTCAGTCTTTAGCCAACAAGATCCCTCTCCC-AGCTGAACT----------------ACAATG---------------TACAAGTTCAGTACACTCCTTA-----TTTTCTAATATTGTTTAGC--------AAAATGCGCAT------GATTAAAGTCTGATTCTTCCTCTCTTTTGGCCTCATGACGCATGATTCTTGGCAAAATAAAAGCTAATAAT a score=732 s mm6.chr19_random 6041883 1071 + 9870477 AGTCAGCCCGGGCTGGGCGCCTGC-------TGGAGCTCCCCGGG-----GCACCCGGAGGCTGGAGGGG-------CGCAGCGTAGGGCCCCCTCCCGGGGACCCCGAGGCCAGAGCGGGGCGGGGAGCTACGCTGGCGGGGCAGGGCTGAGGCTTGGGGTCCCACGGTAGCACTTACTTGAACCTGCCCTGGCAGTGCTGGCACTGGTCCCCAACCCAGCCCGGGTCGCACAGGCAGGTGGAGTTGACACAGCGACCGGAGAAGCAGGAGCCAGTCCTCTCGCAGGGCTTGGACTGGGACACCTGAGCATAGAGCGCCAGGTAGAGGAAGCCATAGCACAGCAGCC--AGCTGTTCCCGTCCAGCAGCAGCCAGGAGGAGGCGCCCCCACCGCCCGCCGGCCGAGCCCTCCACAGCACCGGGGAGGCCGGCTGCGGGGC-------ACCCGAGCGGGCCCGGACCCCCGGCTCCATCTTC-CTCGGCGTCCCGGCTCGGCG-GGGCTGCGCTCG---CGGGAGCGCACGGGGATGCCGCTGAGCGGGGATCCCG---GCCGCAGAGGACCTCGCCGCCGCCGCTGCTGTTCCTCGGCTCCTCAACGGCGCCGACCCCCGTCCCGCTGACCGGTCCGGAGCGGCGG----------------------------ATCCCAGGCGCGGCGGCCTCCGGTCGGC--------------TGCCTCCAGTCACACTCGGGCATCGCCGCCCGCTCCC----CTGACCTTGTCC--TCGGCGAGCCGA------ACCCTGCAGCCACGGTAGCTCCGGGAG--CGGAGCGAAGAGCCGGCGGCGCCCCGCGCTCCGGAGGGGACCCGAGGGGGAGGGGACCGGGCGGGAAGGGGGAGGGGACCCGCA---------cggccccgcctcgcccgcgccccgcgccgAATGCCGAGGCTCGCCCGGGAGGGCGGGGCCGCGCGGGAGCC----CCCGAGATGGGCGCGTCCAACAGGAGC--ACGCGGGGAGGGGA-------------GGGCGGCTGTCGGTACCCGGCGGTACTCCTGCTAGCCTGAGATACCGCAGCAGCCTGCTTCCCTCCGTCCTCCAGACACAGTTG-----CTGTGGCCGCGGT----CGCAGCCCAAACTGCGGAGAGACGTCCCCGCAGCCTTGTGCGTACGCACTC s fr1.chrUn 282517580 1088 + 349519338 AGTGAGCCCAG-CTCGGCGCTCCCAGTTGAGCGGAGCTTCGCTGGTGGAAACAATCGGACTCTGCTGGGTTCATATTCGCATCGCAAGGTGCCATTTTGGGA---------------CGTGGAGGTGCACCGCGC--GCGCGGCGGGGATGGAG-----AATTCTCCCGCAGCACGTGCACGGTCAGGCC-----------------GAGCCTCGTCCCAGC--GGGTC----CGGCTCATGTAGT--GCACAACTTACAGACAAGCGCA---CTTTTCTCCGGCAGAGACCCGAGGAGAACTACCG--------GCACCGGCGGAAATGACCCGTCTCGC-GCGGCCGCAGCGGGTCCCGC---------GCCTGGCGCGTGCACCCGC---GGTCACCTGTTGAGGTATCC-CAGCA-----GTTGCGGGCTTCGCGTCGACTTTGACAGAGGCGCGACCCGTCCTCCGGTCCGTGCGACGCACCGCCTCCCGGTATGGTGCAGGATGAGCTCTGATCCGGAGCGCGCTTCGCT-CAGCGCACCGGGGAACTCGCGCGACGCGGGGAGCCGCGCGCTCTCCGCCAACGTCCGGCGGCTCCACAACGGTCTCAACC----TCCTGCTCAGCGACCTGGAGCGGCAGCAGTTCATCCACTGCCTCAATGTGTACCACGCCAAGCGCAACGTCTTCGACCTGGTCCAGACTCTCAAAGTGATCCTGAACTCGCCCAGTAAGCGCCAGCTGCTGCCCATGCTGCGCGTGGCCATCCCGCGCTCCGACCAGCTGCTCTTCGACCAGTACACCTCCGAGGGGCTGTACCTGAAGGCCGA------CCTGCTCCCCGGCAGCGG--CGGCGAGGAAGACCTCGGAGAAGACGGAGACTCGGCTCTGCAGAAATATGTCAGCTCCATCCAGGAcccgccgcggg------gccaggacccgccgcggggccaggacccgccgcggggccaggacccgccgcggg-------gccaggacccgccgcggggccAGGACCTGCTGACCGCCGTGGCCCCGCCGGTCCTGGGGGGTCCTCGCTGTGACGTGCG---CAGAGTCACCCTGACGCGCTCCAGGAGCCAGGAAGGCTTGGGCTTCAGCATCCGCGGCGGGGCAGAACACAACGTGGGGATTTACGTGTC-----CCTGGTGGAACCGGACTC a score=6174 s mm6.chr19_random 6099819 259 + 9870477 AAAGATTGCTTCAATTTTTATGCCCCATTCATTTTGCATACATGTGACATTATGCATTTCCTTCATCATCATAA-----CATAA--AGCTCTTCTCTTCTGCA---------------------------------CTGGAACTCTCCTCTGATCTTG-ATacacacacacacacactcacacactcacacacacacacacacacacacacacacacacacacacacacacacacacacatatatatatatatatata---tatatatatatatatatatatatatatatatatataATTCCT s fr1.chrUn 131186980 303 + 349519338 AAAGATTGATTCTGTTCCACTGTATGATCATATTTGATCATATTTGATTTTATGCTTTTTGTGCCTCATTACAACAGTGCATAATTAGCTTGCACCTTCTGCCTGTAAAGATTCATCATTCAACCACTGAGTCACTCTGGAAATAGACtatgtgtgtgtatatatatttatatatacatatacaaacatatatatatatatatatatatatatatatatatacacacacacatacacacgtgcgtgtgtgtatatatacggtatatgtgtgtgtgtgtatatatatttatatataCAGTACAT a score=-285 s mm6.chr19_random 6590636 74 + 9870477 CTTGACaaaaaaagaaaaaaagaaaaaaaagaaaCTTGC-CGAACACAGAAGACCCAAGGGCCACTTGGCAGGGA s fr1.chrUn 271407198 72 + 349519338 CTTGTTAAATACCACGGACAAGAACAAGGACACACACACACACACACAAAATTTCCATAACCCTTCTTCT---GT a score=6369 s mm6.chr19_random 6590710 162 + 9870477 CTTACCACTAAGTCCAGGAACTGAATGTAGCACTCCAGCCCAGGCCTGGTTTCACAGAACTGTCGAAAAAGCAGTCTCCCAATTGGTTGCTTGTCACATAGACTGTAGTAATCTCTGTCT------GGAGAAAAGGATAAGAAATGTGTGGTGAATTGGGTCCAGAAT s fr1.chrUn 106115633 167 + 349519338 CTTACCACAGCATCCATAAACTCGATGCAGCGCTTCAGCTCCGGCCGGGTGTCGCAGTACTGACGGAACAGCAGCCGGCCGATGGGCTGCTTTTCACACAGACTGGTGTAGTCTCTCTCTGAGGAGGGAGAAAGAGCGCAGAAATGT-CATTGTTTCGTGTGCAAAAT a score=2049 s mm6.chr19_random 6725606 151 + 9870477 TATTTTCTATATTTAATAAAAACATTATCTCTTTTGAGGC-TCTGGAAGTCTAGAGTCACATTTTTGTAACCCCCCCTCCAATCTAAAATGTCTTAAAACACATGGCTTAACAGTGGCTGCACAGAAAATATACACCCTCAAA----GTCTGACTT s fr1.chrUn 295265650 142 - 349519338 TATTTTCCTCCTTCGATAATCA---TCTCTCTTTTTAGGTATCTGTCAATTTTGGGCCACATTTTAAGCATCCCCCGAAGGACCTAAAGTACC-----------AGCCGGTGAGTTGGTGCAGAGAAGATTCTGATTCCCAAATGTCTCCTGACTT a score=3749 s mm6.chr19_random 6727480 165 + 9870477 GCTGGCCAGGCTGGCTCTCTCACCTGACGCCTGAAGAGTCTGTGGAACAGCCCTTTCTTTGGCGGTTCTGGAGGCTGACTTCTGTTCAGGTCTGGTGAGAGGGTACCGTTAGGTCCGAACACATTCAGCTCCTTGAAACATTCTGTTTCTATCATCTGGAGAAGC s fr1.chrUn 106104799 165 + 349519338 GTTGGCGGAGCACTAGCACTTGCCTCTCTTCTGAACAAGCGGTAGAAGAAGCCCCTCTTTGGTGGAGGGTTGGGCCGGTTCACGTCCAGGTCTGAGCACAGCTTCCCGTCCGTCTCGTAGATGTTGATTTCTTTGAAGCACTCCATCTCGATCATCTGCAAAGGC a score=8419 s mm6.chr19_random 6728091 151 + 9870477 TACCTCATTTTGCCATGGAATTGGCACAGAGCCTGTAGAGAACTTTGAGTAAAAATCATCGTCCGTATGGTCCAGGTTGACACCTTTCACAGTGGAGAACTGCTCAATGTCCAGCACATCCTTGCAGTATACAGCCCGGGGCTACAAGAGA s fr1.chrUn 106105094 151 + 349519338 TACCTCGTTCTGCCACGGGATGGAGACACTCCCTGTGACAAACTTGTGGTAAAAGTCATCATCGGTGGGGTCGAGGTTCACGCCTTTGACAGTGGAGAACTGCTCGATGTCCAAGACATCTTTGCAGTAGACAGCTCGAGGCTGCCAGGGA a score=62 s mm6.chr19_random 6728242 83 + 9870477 CAGAGGGAT--CCATCATGGGCCCTCCCTAGGGATGTCAGGTCCTCA--AGCCTGGCCCTTAGGGTTT--TGATGGAGAACAGTGGAGA s fr1.chrUn 282988555 89 + 349519338 AAAAGACACGACCGTCTCAGCACCTCAGTTAGCATCACTCGTTAGCATCACCCTGGCGTTCAGGACTTAATGTCAGAGAGGAGAGAAAA a score=281 s mm6.chr19_random 6731849 78 + 9870477 TGTGAGGCAAAACTCAGGGTCTGATAGAAAACACAGCTTGGAGAGATGACTTTAGAGCTCCTAGGAGCAATAGTGGCT s fr1.chrUn 271400422 65 + 349519338 TGTTAGCCAAAGCTTCAGGTCTTTGTGAGCTGATGTCTTGGACAGTTTCCTTTTAAACT-------------GGAGAC a score=91 s mm6.chr19_random 6731927 1 + 9870477 A s fr1.chrUn 282988646 1 + 349519338 A a score=8166 s mm6.chr19_random 6731928 157 + 9870477 CTCACATCTGGAACGAAGGGAGGGTCCAACATCCCAGCCTCCAGGCGCTTAAAGTTCATGTTCCTGAAGAAAGGGTGCCTCTTGACCTCGGCGGCCCCCTCCTCCTGGCAGCCCAGCCTCTGCTTCGAGTCTTTGGTGAGCAGCTGTGACAAGAGAG s fr1.chrUn 106105859 157 + 349519338 CTTACATCTGGGCAGAAGGGTGGGTCCAGCATGTTGGCCTCCAGCCTCTTAAAGTTGATGTTTCTGAAAATGGGGTGTTCCTTGACCTCTGTGGCCCCTCGACCCTGGCAGCCCAGTCGCTCTTTGGGGTCCTTGGCAAGGAGCTGGCACACAGGAG a score=9087 s mm6.chr19_random 6734867 237 + 9870477 CTTACCATGTTGCAGATGGACTTGGCCTCTTCAGAGAACTTGGAGGAATACACTTCCTCAGTCTCCAGCACCCGGCGATCCACCTCTTCCCGCTTAACCTTCTCCTTGCGACCTCGAAATGGTGACTGGCCTTCAATCATCTCATAGATGAGGCAGCCCAGGCCCCAGTAGTCAGGGCTCAGTCCATATCGCTGGTTGTTCAGAACTTCTGGGGCTGAGAACAGGAGGGAAGAGAGT s fr1.chrUn 106106774 236 + 349519338 CTCACCTGTCGGCAGATGTCTTTGGCCTCCTCTGAAAACTTGTCGGAGTACTCCTCCAGGTCCTCGCGCACTCGCCGGTCCACCTCCTCCCTCTTGACGCGCTCCTTGCGCTTGCGGAAGGGCGACTGGCCCTGTATCATCTCGAAGATCAGGCAGCCCAACCCCCACCAGTCCGGGCTGAAGGTGTAGCTCTCGTTCTGGATCACCTCAGGAGCTAAGCGGAGGAGAG-GGAGAGT a score=5048 s mm6.chr19_random 6737189 101 + 9870477 ATTACTCACCCATGTAGCCAACAGTGCCTACCCGGCCACGGATAAGGTCTCCCTCGGGGATCTTCACGGCCAGTCCGAGGTCTGAGATCCTTATGTGGCCT s fr1.chrUn 106107065 101 + 349519338 AGTAATCACCCATGTATCCAACAGTGCCCACTCGCCCTCGTATCGTCTCTCCTTCGGGGATTTGAACAGCAAGACCCAGATCTGAAATCCGAATGTGTCCT a score=442 s mm6.chr19_random 6737290 63 + 9870477 GTTGGGGAGAGTAGGGTTAATGGGTTCCT--------GTGGTCATGTGGGCACCCTGGTCAGGGCCACAGA s fr1.chrUn 282989879 67 + 349519338 G--GAGGAAAGCACGAGTCAGCACTTTCTCATTGATGGCTGTTGTGTGGGAAACAC--TCAGAACCACAGA a score=3085 s mm6.chr19_random 6738733 110 + 9870477 CTAGCCTCAGATACTCAAACA---GAAAAGGCCCTCA----TTTTCCAGCACTG--ACTTACCATAATCATCCAGCAAGATGTTTTCGGGTTTTAGATCTCTGTAAGAT-GAAAACAACA s fr1.chrUn 106107384 120 + 349519338 CTACACACAAATTCCCCGACACGTGCAATGGCTCCCAACAATACTAAAACGTTGGAACGTACCGCGATCGTCCAGCAGGATATTTTCAGGCTTCAAATCCCTGCAGGACAGAAAACAAAA a score=-718 s mm6.chr19_random 6740703 455 + 9870477 gcaccaaatctaggtagtttataattacctgta-atcccagctccaggggagccactgccccttctagacttagcaggcatatgt---gcagataaatcca---caaacacacacatatgtaaatt---aaaaaAAATAA----AAATAGAAACTTTGTAAAGTTTAGGAGGGGCAACAGA---GCTTTAAAAAAATCCTC----TGCACTATGAG-GATACCATGAA---GCCCTTCTCACTGTGAGAAGCATTTTGTATGGTTTTCTATAGAGTCCAAGCCATGGTGGTACTGAGAGGAGAGGAAGGTGAAG-------GTTAGAGCAGGCTCAGGATTGGGTATGTCA--AGATATGTGGCAATGTGATGCTCTTGGACAGTGACTCTCCCCACATCTCCCTGGGACTGGTTCC------AGGTAGTAGTCACCAGGATCCACTGA-------------------GTGTCCCTGGGTACAGGGTGACAGGGCGGCAGTGA-------TCACAGCCTCT s fr1.chrUn 295268213 494 - 349519338 GCACCACATCTGTGT--TCCATACACACCCATGTATCCCAGC----GTGCCCACCCTGCCATGCACCAGCTTCCCATCCGTCAGTCTGACAGCCAGGCCCAGGTCAGAGATGCGGATGTGTCCTTTCCGGAAAAAAATAGGCCCAAAAACAAACCTTAGACCAGTTGGGTAGTGTGACAGCTACGTTGCAACAGGAACCTCAAGACAAACTATGAGTGATGGCACGAATTTGCCCTTGTCACTGTGTGCAAATGATTGCGTCATTCCTTCAGCGGT----------GTGAGACGGGAAGGAGCAGCTGGAGAGATTAAATAGTTACCAAACTCCCAGGCGCAAGTGTTTTGTCAGTTATTTGCCACG-------CCTTTGTCTCTAGTATTTCCAAAACATCCTCGGCACCATTTCCTCCTCAGCATTCTAATTACCTGAAGCTCTTGTCTGGTTAACAATTTATGTTGTTTTCTGAGCTAAAGATTGAC----CAGCAGTGAGATTTTATTCCACCCTCT a score=-522 s mm6.chr19_random 6741248 51 + 9870477 CTTACTAACT---AGGTTCCTGGGAACCTGGGATACTGTTGGGATGATACTGCA s fr1.chrUn 295268804 52 - 349519338 TTTAATAACTTATAAAACCCACAAACCGTAAGATAATCTTTAAAAGAAA--AAT a score=11458 s mm6.chr19_random 6741299 261 + 9870477 GGGGCCCAGCCAGACTCTGGGAGCACT-----GCTCACCTATAGACAGTGTTCTCACGGTGTAAGTCTTCTAGGCCACAGAGGATCTCAGCTGCATAAAATAAGGCTCGCTCTTCCTCAAAGCCAGGATTCCCCATATTGTAGATGTGAAACTTCAGGTCACCACCATTCATAATGGTCAGAACCAGGCATAGTGCATCTTTGGTTTCATAGGCATAGGCCAGGTTGACCTGAAAACACAAGAGCAGCACAGTGAGGTCATAGCAA s fr1.chrUn 106107811 266 + 349519338 GGGGCGTGCGCGCGCCCTGGGGCCGCGTCCCAGCTAACCTGTAGACTATCCTCTCGCGGTGCAGGTCTTCAAGGCCACAGCAGATCTCGGCAGCGTAGAAGATGGCCCTCTGCTCGTCGAAGCCCGAGTTGCCCATGTTGTAGATGTGAAACTTTAAATCGCCGCCGTTCATTATGGTCAACACCAGGCACAGCGCGTCCTTGGTCTCATAGGCGTACGCGAGGCTCACCTGGAAAAGGGAGGAGAATTCTGTTAGGGGGCAGGAA a score=7569 s mm6.chr19_random 6744625 159 + 9870477 ACTCACCACAAACTGGCTGTTGACCTTCTCAAGAATCTGCTTTTCGTTGAGTGCCATGGATTCGCCTTTCCTCTTTTTGATCCTCTTCTTCTCTAAGCGTTTACAAGCATACATTTTACCAGTGGCCCGAACCTGGCAGGCACAGACCTGCGGTAGAAG s fr1.chrUn 106110040 159 + 349519338 ACTTACAACAAAACTACTGTTAACTTTTTCTAAAATGCGTTTTTCGTTCAGCGCCATTGCTTCGCCCTTCCTTTTCTTCACTCGTTTTTTTTCCAGCTTTTTACAGGCGTACATCTTCCCGGTGGCGCGCACTTGGCAGGCACAAACCTGGAAAACAAG a score=4413 s mm6.chr19_random 6745639 105 + 9870477 CCCACCCCTTCAGTGCT----CACTTACCTCTCCAAAGCCCCCTTTGCCCAGCACTCGGTACTGCCGGAAAGTGTTTTTGGTCACTGGTTGTCT----GGAAAAATATCAAGA s fr1.chrUn 106110452 113 + 349519338 CCTACTTCGTAAGCACTGTGCCACTCACCTCGCCAAATCCACCTTTCCCGAGTACTCTGTAGTGTCTGAAGGTATTTTTGGTTACTGGTTGCCTAAAGGGAAGGAAAAGAAGA a score=3325 s mm6.chr19_random 6748634 286 + 9870477 TACCCAAAAACTTAGTTAGTAGAAGGAGGAAAATCAATTTCA--TTGATCTTTATATGAATTATCATACATATGAATTCTGTACCCTACCTCACACTTGCACACACTCATGTGAGGAGTGCAGAGTACTCACCTTTCTAACCATTTCCACTGCAGAAAACGGTCAAAATACATGCTATCCAGGTACTCGTGGAAGGGGTCTCCCTTCAAGTAGTCATGGACAGACCTAGCCCAGGGTGACAGAAAGATGAAC-ATGTTATAATCCCTATCTTGAAGTAGCTAGACAGAG s fr1.chrUn 106111373 278 + 349519338 TACCCTATTATTTTGCTTGGAAAATGAATACAAGAAGTGGCAGTTTATTATCATTAGGAATAAGAAACTAAATGGATGATCCAGGC-AGCAGTTGTTGGTAAAGGCTCATCTGCAGTGTC-----TACCCACCTCTCCAACCATTTCCACTGCAGGAAGCGAGAGAAGTACATGGACTCCTGGAAGGAGGAAAATGGAACCCCACTCAAATAATCACGAA-----CTATTCTGCAAAGACAGAGAGAAGGGCGATGACGAGATCACTATGGAAAGGCAGACATGCAGAG a score=2400 s mm6.chr19_random 6749477 150 + 9870477 CCCAGGTGGGCAATGCATGATGGTAGAACACTTACTGAGCACAAGCAGAGAAGAGTTCTTTGCAGGGGCTCTGCAGGAGCTTCTTCTCTGTCTGGGAGACCAGGTCCTGTCCAACTTGGGCAATGAAGACTGGGGACTGGAAGAAGGAAA s fr1.chrUn 106114099 143 + 349519338 CTCAGGTGTGCAGCGTGTGG-------ATACGTACTTGGTGCAGTCATCAAAGAGCTCCTTGCAGGGACTCTGTTCCAGCCTCTCCCGACACCCGGCGACCACTTCCAGGGGTATGTCAGGCAGATGGGCCGCCGACTTCAGGGAGAAGA a score=2034 s mm6.chr19_random 6749715 43 + 9870477 AGATGTAGCTACCTGTCCCTGCATATGGTCACCTGCCCTGTCG s fr1.chrUn 106115340 43 + 349519338 AGGTTTAATTACGTGTACCTGCATGTGCACGTCTGCCCCGCCG a score=2631 s mm6.chr19_random 7086986 61 + 9870477 GTTCTTGGTCAGAACCTGCAAATAAACTTCATGAAGCATACTGAGGAAGCTGGAGTCATTC s fr1.chrUn 197788575 61 - 349519338 GTCCTTGGACACACTCTGCAGGTAAGCTTCATGAATGGCGCCGAGGAAATCGGGATCGTGC a score=1790 s mm6.chr19_random 7087047 278 + 9870477 TTTATTAGATGTATCAGTGTGCCCCGGAGCTGAGACTTGCTGAGAATAATGGAACACTTTCTCTGATTTTCTGGTGTTCCAGCAGTGAGGGGAGA-------AGGGGAGCTGGCTTTACTCTCTAAGGTCTG---TGGCCCTGGGAACTGTTTGCTGGAACACAGTGGGGGACAACAGGACTGAAGATACTGCTGTGGTTGTTGCAGGAACCAATGGAAAGCCTGCAATCTGGAAGGTTGGAACAAGCACCATGTTGCTCAGGGAGGCTGAGACTGCTTCTGTCTTAG s fr1.chrUn 197788767 252 - 349519338 TTAATAAGGTGTATCAGAGTCTCCTGCAGCTGGGTTTTGCTG-----CATGGAGCTGTTGC----AGGATCTGTTCCTCCCACAGAGGTGGGCGAGGACTCGGGGGGGGCGGGAGCGACCGCCGATGGTGGAGATTTACCGTGCGA-----CTGCTGGAAGACGCTGGGCGAGAGGAGCACAGAAGC-----CTCTGGTTG----AGGAAC----GACGAGACCGGGACCCTGAGGG---------ACAGCCTAGAGTTAAAAAAGGAAGATAGCGATGCTGGATTAG a score=2251 s mm6.chr19_random 7089287 187 + 9870477 TCATCCTTGGCTCTGCTTAGCATTTCCAGAATATCTATGGGCCTCTGGTCACTGCAGCCATTGGCC---------------------------------TGGCTAGGACTC------TGTTTA-----TCTCAAGCAGCCAGCTGGGA---------TCGCCATGTCTCCTTTTCTACCACG---------------------------TCAGCCATGAGTTTTGCTATGCAGTGACAGTCGTTCTTGACATAAAACCAGATACTGT s fr1.chrUn 197790752 267 - 349519338 TCCTCTTTGGCTTTGCTGAGGAGTTCCAGGATGTCGACAGGCCTCGGCTCTGCGAGCCCGTTTGTCCTGTGACGCTCTGCCCTCTTCGGTGACTCTCTCTGGGTGTGGCTCACCTCTTGTTTCACGATTCTGCAGCACAGAAGTGGGACAAACTGACTAGAGCTGTCTATTAATCTGCGCAGATGCAGAGACGGGTTGGGTTTACTTACTTGACCATCAGCTGGGCGATGCGTTGACAATCCCTCTTGTCATAGAACCAAATACTGT a score=5667 s mm6.chr19_random 7089474 139 + 9870477 ATATTGACAAACACGCATTTCTATACAGAAGAAATGGTTCATGGAGCTGGAATTTCAAATCTTTATTCACTGGCTCAACCAGATTGTGCATGTTCAGTCGGTTGACAATGGTAAAGCCATGGTAAGACGAAGCTGACCT s fr1.chrUn 197792643 138 - 349519338 ATACTCACAGTTGC-CTTTCCGATAGAGCAAAAAGGGGTCTTGTAGTTGGAACTCGAGATCTTTGTTGATGGGCTCCACCAGGTTTTCTGTGCTAAGTCGGTTCATAATAGTGAAGCCATGGTGAGGTGAGGCAGACCT a score=3336 s mm6.chr19_random 7089643 152 + 9870477 TCTCACACTGTTTGGCTTTGGGGAAGAAAGTGTACAGTGTGACCTGGCCTGTGAGGTCTGCGATGCTGGTGATATAGGGGTTGTGTTGTTTCAAGGCCACCAGACTCATCTCTTGCTCAGCTTGACTCAATTCTATCTtggatcc-----tctccca s fr1.chrUn 197793428 157 - 349519338 TCACCCATTCGTTCGCTTTTGAGTTAAAGTTGTAAAGTGCCACCTGGCCGGTAACATCGAGCAGCTTGTTTATATATGGGTCCTTTCTTTGTAGAGCCGCTAAGCTCATCATATGTCCGGCATTTACGGTCTCCATCTTGGATGCGACTGTCTCCCA a score=5736 s mm6.chr19_random 7314589 301 + 9870477 AAACCAAAGTGTCAACTATGAGGGGGAAGAAAAAAAAAAAACCTAGGAACTAAGCCAAACAATTGTGTGGGTTTAGTCTTCTACACTGACTTCACAACTGTTACCAGGTTTATAATTATTGATCTACTGATTGCTTTCAAACCAACTACTGAAAGACTGTGAAAAGCCCTGGTAAGCatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatgatagatagatagatggatagaaagagagaGAAAGAGAGATGTATATATACACG s fr1.chrUn 273854184 265 + 349519338 AAATCAAAGTAAAAATGATCATAAATGAATAAAATAAATAAATAAAGACATAATTTAAACAATTGCATTGATTTAATCAGCAGCACAGCCAT----AGAGTCAAGGGG----CAGTTTTTG---------TTGCCATCAGATCAGTCTC-------CCATGAagag-----------agagctagagagagagagagagagagagagagagagagagagagagagagagacagacagagagagaga-gacagagagagagacagagagagacagagagagagagagatatagagacagaag a score=5942 s mm6.chr19_random 8030161 176 + 9870477 GTAGACCTTCACAGGGCTTTGCGATGATAGTTAGCAGAAGCCACTTTGTAATCACTGGCAGTAAACAG--AGGCAGAATTCTTTGCCAGATAC----------------------------------------------------------------------TTAAGGAAATCATGCAGATAGCCCAGCAATAATGCCAGGCTTTTCTCATCAAGGGGTGTATAGGCCAACATTGCCCCAATTCTCA s fr1.chrUn 227236060 248 - 349519338 GGAGACTCTTAAACGGCCTTGCGGTGGTATTCTGGAGGAGCCACCTCGTAGTCACTGGCATTGAAAAGTGATGCAGAGTTCTTCACAAGGTACCTGCAAGAAAGCAATATTTTACTCTCTGCTGCACAATCAGAGCAACGGCAGCAGCTTCTCCAACACTCACTTGAGGAAATCTTGTAGGTAATTGAGCAGCAGCGCAAGGCTCTTCTCATCCAGGGGAGTGTATGCCAGCATGGCTCCGATCCGCA a score=11720 s mm6.chr19_random 8030337 378 + 9870477 CGAATAATCTCAGTAGGTGTGGCGCCCCATAGATCTGCGACATTGGCGCATCAGGGTGAGCCAGCAGAATCTCAGCATACTGAGGCCTTTCAAACTTGTACAGCAGCTGAGTGCCCAGCATCACATTGAAATACTCTTTTATCCCTCCTACAACTTCATTAACTGCGTACTC---------------------------------------------------------------------------------------------CTTATTATCAACATTTCCCTGCGACTTCTTGCAATTGGCATACTCCTCAAGAATGGCATCGACATTCTTTTTAGCAGGGAGCTGGAACAA----------------------------------------------------------------------------CTGCTTCTGCCTCGTAACCAAGTCCCAGTCCTCCACCAGCCACGGTTTTAATTCTTCAGGGATCTTCACCTTCACCTCCATCCTACTCTTGAATGCCTCCTCGCTCTCCACAGTGG s fr1.chrUn 227237217 544 - 349519338 CGAAGAGCCGGAGTAGGTGAGGAGCTCCATAGATCTGAGACATCGACGTATCCGGGTGGTTGGCCAGGACGTCTGCATACTGTGGTCTCTCAAATTTGTAGAGAAGCTGCGTCCCCAACATAACGTTAAAATATTCCCGGACACCAGCCACCACTTCATTCACAGCAAACTCCCTAAAGAGCAGTGTAAAAACAAGTTATATGTGGCAAATGACAGAGGTAAGTATGGAAACTAGAATAAGTGGAGGAACTGGAAGGGCTTTTTACTTGCTGTCAGAGTTTCCTCTTGATTTTTTATAGTTTGCATAATCTTCGAGGATAGCATCAACGTTCTTTTTGGCAGGTAGGTGGAAAAGCTGAAGGCATTCAGGTGCATCCAAGTTAAACAGCTGTAAAAGATGGTGGTATAAATGTGTGGCAATGAAATGGAACCTGTTTTTGTCTGGTAATCAGGTCCCAGTCATCCACCAGCCAGGGTTTCAGCTCCTCTGGGATTTTTACTTTAACCTCCACTCGGTTTATGAAGGTTTCCTC---CTGAACAGTAA a score=2879 s mm6.chr19_random 8030715 76 + 9870477 GGTCAGCCCGTGCCCTTTTCTTCCGAGGGGGCTGG---GGGACTTAACTGGTACTGCCACCGTCTCCGTTGCCAGGAGC s fr1.chrUn 227237888 79 - 349519338 GATCAACTCGTGCCCTCTTCTTTCGAGGAGGGTGGGTCGGGTCTCCTCCTGAACTCGTTCCTTCTCCTGCACCAGGAGC a score=2683 s mm6.chr19_random 8030877 81 + 9870477 GATCGAGATTCTTTGGCTGCGAACCAGCTGACTTCTTTCCCGAGGCAGCTCCTCTCATCTTACTTCTCTGCATATTGCTTC s fr1.chrUn 228584186 80 + 349519338 GATCAACATTTTTTTGCTGCACAGCAGCCATCTTCTTGCTCGGTGCTAAACCCCTCATCTTTC-CCTCAACATAATGATCC a score=9969 s mm6.chr19_random 8112774 188 + 9870477 TTTACTAAGTAGCTCCTGAAGGGCTGCCCTGGCCAAGGAACTGTGAACCTTCAGTCTCTTGGAGACCACAGCTGGAGTAATAA-CTTATAGTTGGGAGCTTCCTTACAGAGTTTGTCCTATGTAGCTTTGTCAAACAGGACGAGATTGTTCAACTTGTCCCACACTTTGCCTTTGGACCACTTCTTCTT s fr1.chrUn 53701056 189 + 349519338 TTTGCCGAGCAGCTCCTGGAGGGCGTTTCTGGCCAGTGATCCGCGGATCTTCAGCCTCTCTGACACCACAGCCGGGGTGATGAGCTTGTAGTTGGGGACTTCTTTGTACAGTTTTTCATAGGTCGCCTTGTCGAAGAGCACCAGGTTGTTGAGCTTGTCCCTCACTTTTCCCTTGGACCACTTCTACTT a score=5422 s mm6.chr19_random 8830989 144 + 9870477 ACTGCAGCAGTCTGGGGCTGAGCTGGTGAGGCCTGGGGCTTCAGTGAAGATGTCCTGCAAGGCTTCTGGCTACACCTTCACCAGCTACTGGATGCACTGGGTGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATCGGAGCGAT s fr1.chrUn 320601857 144 + 349519338 ACTGGATCAGTCTCAGCCTGAAATAAAAAGACCTGGACAGACAGTGAAGATGTCCTGCACCATTTCAGGGTTTCGCATGACCAGCTACTATATCCACTGGATACGACAGAGACCAGGGAAAGCTCTGGAGTGGATCGGGAGGAT a score=3725 s mm6.chr19_random 8831380 82 + 9870477 TGACTGTAGACAAATCCTCCAGCATAGCCTACATGCAGTTCAGCAGCCTGACATCTGAGGACTCTGTGGTCTATTACTGTGC s fr1.chrUn 320602057 82 + 349519338 TGACTGAAGACGTGTCCAGCAGCACTCAGTACCTGCAGATCAGCAGCCTGACAGCAGAGGATTCTGCTGTTTTCTTCTGTGC a score=4936 s mm6.chr19_random 8886022 275 + 9870477 TTTATTCCTTTCTCTGTATGgagagagagagagagagagagagagagagagagagagagagagagagagattagaaacagacacagagagaga-------------------------cagagaAGG---------------------------------------GGGTGGGCTTTGA-------TTCCCGTTCTGGCTTTG-------------------------------GATGCTGGACTTAGGAGAGGAGGGATGGAGGAGACCACAA--AGGTGGAGAGAGTGGAAGAGAGAGATGGACAGAC-------GGACAGCACTGGAGGATGTTTCTTCAGAGAGCCCAAGGCTGAGTGCAGAAGGCCACAGGGCAGTGGGAG s fr1.chrUn 91075540 371 + 349519338 TGTAGTCCTTTGTGCATTTagagagagagagagccagaaagacagagagagagagagaaagagagaga---tagaaatagagagagagagagaaagCACTCTGGAGACAAAGTGCAGCCAGAAAAAGCCAGCTGCCACTCATCTCTGCCAAACTTGGCCACTGATAAGGAGGACCATAGGGAGATGTCTGCACTCAGGCCTTGTCCATCAAACACAAGAACCTCTTCACAAGAGAGTGTTGGAAGTGACTGGGAGGGGGAGGAGGGTGCCACAAGAAGATGGAGAGAGTGGAAGACAGACATGGACTGGCTCGGCGGGGAGAGGACTGCAG----------CAGGGTGTCGAA--CAGAGAGGAGACAGTCAAAGGCCGTCAGAAG