GENEMARK PREDICTIONS Sequence: gi|120536823|ref|NC_008738.1| Marinobacter aquaeolei VT8 plasmid pMAQU01, complete sequence Sequence file: NC_008738.fna Sequence length: 239623 GC Content: 54.05% Window length: 96 Window step: 12 Threshold value: 0.500 --- Matrix: - Matrix author: - Matrix order: 2 List of Open reading frames predicted as CDSs, shown with alternate starts (regions from start to stop codon w/ coding function >0.50) Left Right DNA Coding Avg Start end end Strand Frame Prob Prob -------- -------- ---------- ----- ---- ---- 57 3077 complement fr 2 0.71 0.67 57 2852 complement fr 2 0.74 0.34 57 2741 complement fr 2 0.74 0.25 57 2561 complement fr 2 0.75 0.02 57 2390 complement fr 2 0.76 0.42 3430 4014 direct fr 1 0.77 0.04 3460 4014 direct fr 1 0.79 0.30 3886 4014 direct fr 1 0.71 0.04 4090 4689 direct fr 1 0.54 0.10 4093 4689 direct fr 1 0.55 0.14 4111 4689 direct fr 1 0.56 0.16 4120 4689 direct fr 1 0.57 0.34 4129 4689 direct fr 1 0.58 0.09 5909 6421 direct fr 2 0.73 0.31 5924 6421 direct fr 2 0.75 0.64 6029 6421 direct fr 2 0.76 0.00 6056 6421 direct fr 2 0.75 0.01 6233 6421 direct fr 2 0.63 0.02 7399 8652 complement fr 3 0.74 0.14 7399 8421 complement fr 3 0.82 0.36 7399 8412 complement fr 3 0.82 0.20 7399 8379 complement fr 3 0.82 0.36 11328 11762 direct fr 3 0.53 0.13 11334 11762 direct fr 3 0.54 0.18 14700 15275 direct fr 3 0.52 0.12 15619 15963 direct fr 1 0.83 0.30 15754 15963 direct fr 1 0.81 0.15 15787 15963 direct fr 1 0.77 0.60 16301 17842 direct fr 2 0.78 0.10 16322 17842 direct fr 2 0.79 0.40 16415 17842 direct fr 2 0.80 0.42 16697 17842 direct fr 2 0.76 0.15 16700 17842 direct fr 2 0.76 0.20 17854 18609 direct fr 1 0.91 0.63 17905 18609 direct fr 1 0.92 0.40 17995 18609 direct fr 1 0.91 0.08 18019 18609 direct fr 1 0.91 0.04 18643 19089 direct fr 1 0.56 0.02 18685 19089 direct fr 1 0.62 0.29 18817 19089 direct fr 1 0.62 0.12 19523 20170 direct fr 2 0.83 0.62 19547 20170 direct fr 2 0.85 0.69 19553 20170 direct fr 2 0.86 0.78 19688 20170 direct fr 2 0.83 0.47 20185 22425 direct fr 1 0.85 0.62 20233 22425 direct fr 1 0.85 0.27 20296 22425 direct fr 1 0.85 0.32 20341 22425 direct fr 1 0.85 0.03 22544 23065 direct fr 2 0.67 0.76 22559 23065 direct fr 2 0.68 0.67 22691 23065 direct fr 2 0.65 0.03 22784 23065 direct fr 2 0.68 0.67 23062 23661 direct fr 1 0.54 0.70 23107 23661 direct fr 1 0.59 0.02 23194 23661 direct fr 1 0.62 0.76 23212 23661 direct fr 1 0.60 0.14 23215 23661 direct fr 1 0.60 0.14 23685 24179 direct fr 3 0.65 0.06 24018 24179 direct fr 3 0.72 0.01 24241 24981 complement fr 3 0.81 0.34 24241 24930 complement fr 3 0.81 0.27 24241 24720 complement fr 3 0.83 0.18 24993 26534 complement fr 2 0.69 0.23 24993 26513 complement fr 2 0.70 0.57 24993 26336 complement fr 2 0.70 0.03 24993 26291 complement fr 2 0.70 0.59 24993 26132 complement fr 2 0.71 0.17 27015 28481 complement fr 2 0.71 0.01 27015 28460 complement fr 2 0.72 0.04 27015 28442 complement fr 2 0.73 0.00 27015 28223 complement fr 2 0.79 0.15 27015 28163 complement fr 2 0.79 0.33 27015 27989 complement fr 2 0.76 0.09 28537 28788 complement fr 3 0.52 0.42 30194 30763 complement fr 1 0.64 0.59 30194 30556 complement fr 1 0.55 0.15 30194 30517 complement fr 1 0.51 0.77 30760 31968 complement fr 3 0.62 0.33 30760 31809 complement fr 3 0.61 0.61 30760 31731 complement fr 3 0.60 0.04 31962 32672 complement fr 2 0.61 0.18 31962 32582 complement fr 2 0.65 0.15 31962 32519 complement fr 2 0.64 0.03 31962 32381 complement fr 2 0.58 0.30 31962 32252 complement fr 2 0.69 0.00 32686 33558 complement fr 3 0.65 0.14 32686 33534 complement fr 3 0.67 0.55 32686 33516 complement fr 3 0.69 0.37 32686 33399 complement fr 3 0.76 0.05 32686 33396 complement fr 3 0.77 0.07 32686 33342 complement fr 3 0.82 0.76 32686 33312 complement fr 3 0.82 0.17 32686 33180 complement fr 3 0.84 0.21 32686 33177 complement fr 3 0.84 0.15 32686 33141 complement fr 3 0.87 0.63 33364 33459 direct fr 1 0.54 0.64 33513 34421 complement fr 2 0.80 0.94 33513 34388 complement fr 2 0.80 0.10 33513 34277 complement fr 2 0.77 0.08 34418 35542 complement fr 1 0.81 0.73 34418 35395 complement fr 1 0.82 0.56 34418 35338 complement fr 1 0.81 0.21 34418 35272 complement fr 1 0.79 0.05 35542 36135 complement fr 3 0.60 0.09 35542 36117 complement fr 3 0.62 0.19 35542 36057 complement fr 3 0.65 0.31 35542 35973 complement fr 3 0.59 0.03 36128 36625 complement fr 1 0.75 0.55 36128 36550 complement fr 1 0.84 0.60 36128 36487 complement fr 1 0.84 0.07 36128 36457 complement fr 1 0.83 0.15 36625 37857 complement fr 3 0.82 0.80 36625 37812 complement fr 3 0.85 0.29 36625 37800 complement fr 3 0.84 0.17 36625 37752 complement fr 3 0.84 0.05 37870 38694 complement fr 3 0.62 0.00 37870 38658 complement fr 3 0.65 0.00 37870 38562 complement fr 3 0.74 0.34 37870 38526 complement fr 3 0.75 0.61 37870 38505 complement fr 3 0.75 0.31 37870 38442 complement fr 3 0.72 0.16 38687 39487 complement fr 1 0.72 0.10 38687 39466 complement fr 1 0.74 0.28 38687 39463 complement fr 1 0.74 0.51 38687 39436 complement fr 1 0.74 0.48 38687 39373 complement fr 1 0.73 0.14 38687 39361 complement fr 1 0.74 0.18 38687 39172 complement fr 1 0.73 0.56 39570 40466 complement fr 2 0.77 0.02 39570 40193 complement fr 2 0.83 0.37 39570 40190 complement fr 2 0.83 0.29 39570 40118 complement fr 2 0.83 0.67 41016 41615 direct fr 3 0.59 0.32 41193 41615 direct fr 3 0.64 0.77 41235 41615 direct fr 3 0.68 0.20 41385 41615 direct fr 3 0.59 0.05 41475 41615 direct fr 3 0.52 0.41 41619 42419 direct fr 3 0.54 0.05 41814 42419 direct fr 3 0.55 0.20 41928 42419 direct fr 3 0.56 0.21 42009 42419 direct fr 3 0.54 0.29 42048 42419 direct fr 3 0.56 0.09 42117 42419 direct fr 3 0.58 0.04 42587 45946 direct fr 2 0.58 0.07 42887 45946 direct fr 2 0.55 0.57 42899 45946 direct fr 2 0.55 0.60 43082 45946 direct fr 2 0.54 0.87 43190 45946 direct fr 2 0.52 0.69 48320 49021 direct fr 2 0.55 0.00 48410 49021 direct fr 2 0.63 0.03 48464 49021 direct fr 2 0.67 0.13 48473 49021 direct fr 2 0.67 0.13 48488 49021 direct fr 2 0.68 0.08 48491 49021 direct fr 2 0.68 0.08 48494 49021 direct fr 2 0.68 0.05 48566 49021 direct fr 2 0.67 0.27 48605 49021 direct fr 2 0.65 0.51 49028 49327 complement fr 1 0.51 0.31 50299 51210 direct fr 1 0.88 0.18 50551 51210 direct fr 1 0.91 0.02 50737 51210 direct fr 1 0.88 0.23 50959 51210 direct fr 1 0.79 0.01 51238 52965 direct fr 1 0.81 0.08 51343 52965 direct fr 1 0.84 0.45 51370 52965 direct fr 1 0.84 0.31 51484 52965 direct fr 1 0.84 0.01 51505 52965 direct fr 1 0.84 0.09 51544 52965 direct fr 1 0.84 0.05 53019 53576 direct fr 3 0.55 0.31 53124 53576 direct fr 3 0.55 0.41 53175 53576 direct fr 3 0.52 0.02 53220 53576 direct fr 3 0.51 0.60 53744 53875 direct fr 2 0.64 0.49 53872 54468 direct fr 1 0.65 0.12 53929 54468 direct fr 1 0.70 0.31 53980 54468 direct fr 1 0.73 0.32 54028 54468 direct fr 1 0.73 0.13 54055 54468 direct fr 1 0.73 0.35 54499 55170 direct fr 1 0.61 0.24 54526 55170 direct fr 1 0.63 0.73 54553 55170 direct fr 1 0.66 0.14 54559 55170 direct fr 1 0.66 0.03 55846 56370 direct fr 1 0.62 0.80 56080 56370 direct fr 1 0.71 0.30 56083 56370 direct fr 1 0.71 0.29 56134 56370 direct fr 1 0.73 0.64 56149 56370 direct fr 1 0.71 0.22 56191 56370 direct fr 1 0.67 0.04 56851 57477 direct fr 1 0.56 0.13 56857 57477 direct fr 1 0.57 0.44 56878 57477 direct fr 1 0.58 0.88 56914 57477 direct fr 1 0.60 0.13 57070 57477 direct fr 1 0.57 0.13 57157 57477 direct fr 1 0.57 0.10 57175 57477 direct fr 1 0.58 0.19 57292 57477 direct fr 1 0.68 0.85 57502 58530 complement fr 3 0.83 0.02 57502 58497 complement fr 3 0.86 0.05 57502 58347 complement fr 3 0.90 0.52 57502 58035 complement fr 3 0.89 0.09 57502 57963 complement fr 3 0.87 0.35 59178 59966 complement fr 2 0.61 0.53 59178 59945 complement fr 2 0.60 0.21 59178 59933 complement fr 2 0.60 0.30 62797 63930 complement fr 3 0.58 0.00 62797 63927 complement fr 3 0.58 0.00 62797 63903 complement fr 3 0.59 0.03 62797 63885 complement fr 3 0.61 0.21 62797 63879 complement fr 3 0.61 0.62 62797 63855 complement fr 3 0.62 0.27 62797 63555 complement fr 3 0.63 0.07 62797 63384 complement fr 3 0.76 0.79 62797 63213 complement fr 3 0.76 0.10 62797 63198 complement fr 3 0.77 0.14 63872 65035 complement fr 1 0.69 0.19 63872 64870 complement fr 1 0.69 0.20 63872 64714 complement fr 1 0.65 0.12 63872 64642 complement fr 1 0.68 0.25 63872 64621 complement fr 1 0.69 0.53 63872 64570 complement fr 1 0.70 0.10 65305 66534 complement fr 3 0.69 0.67 65305 66525 complement fr 3 0.69 0.59 65305 66387 complement fr 3 0.66 0.04 67175 67345 direct fr 2 0.53 0.60 68911 69309 complement fr 3 0.66 0.02 68911 69231 complement fr 3 0.76 0.13 68911 69204 complement fr 3 0.77 0.08 68911 69135 complement fr 3 0.73 0.07 68911 69069 complement fr 3 0.61 0.04 69456 70505 complement fr 2 0.55 0.69 69456 70490 complement fr 2 0.55 0.64 69456 70406 complement fr 2 0.56 0.09 69456 70313 complement fr 2 0.58 0.04 69456 70280 complement fr 2 0.59 0.05 69456 70211 complement fr 2 0.60 0.25 70727 71833 direct fr 2 0.74 0.79 70787 71833 direct fr 2 0.76 0.03 70934 71833 direct fr 2 0.72 0.07 70943 71833 direct fr 2 0.72 0.01 70985 71833 direct fr 2 0.76 0.73 71015 71833 direct fr 2 0.77 0.89 71270 71833 direct fr 2 0.70 0.62 72265 73590 direct fr 1 0.63 0.43 72298 73590 direct fr 1 0.65 0.30 72361 73590 direct fr 1 0.63 0.01 72388 73590 direct fr 1 0.63 0.05 72436 73590 direct fr 1 0.61 0.14 73666 79395 direct fr 1 0.83 0.49 73675 79395 direct fr 1 0.83 0.41 73696 79395 direct fr 1 0.83 0.42 73837 79395 direct fr 1 0.84 0.52 73885 79395 direct fr 1 0.83 0.26 73996 79395 direct fr 1 0.83 0.66 79395 80933 direct fr 3 0.65 0.78 79401 80933 direct fr 3 0.65 0.66 79434 80933 direct fr 3 0.66 0.09 79440 80933 direct fr 3 0.66 0.19 79512 80933 direct fr 3 0.64 0.60 79602 80933 direct fr 3 0.65 0.71 80930 82546 direct fr 2 0.90 0.90 80969 82546 direct fr 2 0.92 0.97 81260 82546 direct fr 2 0.92 0.43 81272 82546 direct fr 2 0.92 0.62 81428 82546 direct fr 2 0.91 0.83 82693 83961 complement fr 3 0.63 0.47 82693 83895 complement fr 3 0.65 0.01 82693 83814 complement fr 3 0.66 0.18 82693 83796 complement fr 3 0.65 0.03 82693 83670 complement fr 3 0.61 0.05 84509 85243 complement fr 1 0.77 0.72 84509 85222 complement fr 1 0.78 0.40 84509 85117 complement fr 1 0.75 0.51 84509 85108 complement fr 1 0.74 0.56 85351 86634 complement fr 3 0.52 0.33 85351 86610 complement fr 3 0.53 0.16 85351 86535 complement fr 3 0.53 0.17 85351 86511 complement fr 3 0.52 0.45 85351 86469 complement fr 3 0.50 0.08 86815 87636 direct fr 1 0.70 0.06 86989 87636 direct fr 1 0.88 0.39 86995 87636 direct fr 1 0.88 0.56 87025 87636 direct fr 1 0.88 0.07 87639 88634 direct fr 3 0.77 0.38 87675 88634 direct fr 3 0.79 0.25 87693 88634 direct fr 3 0.79 0.48 87711 88634 direct fr 3 0.78 0.58 88637 90184 direct fr 2 0.82 0.44 88727 90184 direct fr 2 0.86 0.78 88820 90184 direct fr 2 0.86 0.10 88973 90184 direct fr 2 0.84 0.11 89279 90184 direct fr 2 0.83 0.30 90272 91858 direct fr 2 0.75 0.77 90428 91858 direct fr 2 0.77 0.04 90656 91858 direct fr 2 0.72 0.02 90737 91858 direct fr 2 0.76 0.09 90776 91858 direct fr 2 0.78 0.09 90911 91858 direct fr 2 0.82 0.09 91874 92488 direct fr 2 0.70 0.51 92012 92488 direct fr 2 0.73 0.05 92039 92488 direct fr 2 0.75 0.23 92042 92488 direct fr 2 0.76 0.25 92048 92488 direct fr 2 0.76 0.49 92117 92488 direct fr 2 0.78 0.49 92141 92488 direct fr 2 0.77 0.91 92524 92922 direct fr 1 0.51 0.08 92536 92922 direct fr 1 0.53 0.28 92560 92922 direct fr 1 0.56 0.20 92587 92922 direct fr 1 0.58 0.31 92942 93748 direct fr 2 0.52 0.03 93026 93748 direct fr 2 0.57 0.60 93062 93748 direct fr 2 0.57 0.45 93086 93748 direct fr 2 0.56 0.06 93128 93748 direct fr 2 0.58 0.60 93224 93748 direct fr 2 0.59 0.21 93880 95529 direct fr 1 0.86 0.60 94090 95529 direct fr 1 0.89 0.44 94174 95529 direct fr 1 0.89 0.16 94186 95529 direct fr 1 0.89 0.58 94198 95529 direct fr 1 0.89 0.15 95539 96240 direct fr 1 0.87 0.25 95554 96240 direct fr 1 0.88 0.52 95617 96240 direct fr 1 0.94 0.27 95632 96240 direct fr 1 0.94 0.40 95770 96240 direct fr 1 0.92 0.15 96460 98691 complement fr 3 0.62 0.00 96460 98649 complement fr 3 0.64 0.35 96460 98550 complement fr 3 0.64 0.45 96460 98520 complement fr 3 0.65 0.27 96460 98490 complement fr 3 0.65 0.11 96460 98436 complement fr 3 0.65 0.76 98758 99633 direct fr 1 0.74 0.29 98779 99633 direct fr 1 0.76 0.03 98830 99633 direct fr 1 0.80 0.19 98860 99633 direct fr 1 0.82 0.61 98866 99633 direct fr 1 0.82 0.87 98917 99633 direct fr 1 0.81 0.09 99620 100066 direct fr 2 0.77 0.17 99638 100066 direct fr 2 0.81 0.08 99680 100066 direct fr 2 0.86 0.91 99683 100066 direct fr 2 0.86 0.94 99722 100066 direct fr 2 0.86 0.02 100079 101722 direct fr 2 0.89 0.32 100148 101722 direct fr 2 0.92 0.54 100181 101722 direct fr 2 0.92 0.73 100274 101722 direct fr 2 0.91 0.07 101724 103088 direct fr 3 0.77 0.75 101832 103088 direct fr 3 0.78 0.08 101892 103088 direct fr 3 0.78 0.07 101895 103088 direct fr 3 0.78 0.04 103085 103669 direct fr 2 0.51 0.18 103148 103669 direct fr 2 0.57 0.33 103154 103669 direct fr 2 0.57 0.39 103268 103669 direct fr 2 0.51 0.16 103691 105556 direct fr 2 0.80 0.65 103775 105556 direct fr 2 0.81 0.09 103829 105556 direct fr 2 0.81 0.03 104051 105556 direct fr 2 0.78 0.33 105556 106638 direct fr 1 0.61 0.05 105565 106638 direct fr 1 0.62 0.39 105829 106638 direct fr 1 0.54 0.38 105832 106638 direct fr 1 0.54 0.15 105838 106638 direct fr 1 0.54 0.16 106780 107382 direct fr 1 0.65 0.00 106783 107382 direct fr 1 0.65 0.00 106834 107382 direct fr 1 0.71 0.26 106840 107382 direct fr 1 0.72 0.40 106933 107382 direct fr 1 0.77 0.09 107098 107382 direct fr 1 0.75 0.26 107113 107382 direct fr 1 0.73 0.22 107134 107382 direct fr 1 0.72 0.16 107437 108573 direct fr 1 0.75 0.35 107464 108573 direct fr 1 0.76 0.67 107488 108573 direct fr 1 0.76 0.56 107536 108573 direct fr 1 0.75 0.02 108592 109053 direct fr 1 0.62 0.09 108628 109053 direct fr 1 0.68 0.10 108640 109053 direct fr 1 0.69 0.19 108736 109053 direct fr 1 0.78 0.21 108889 109053 direct fr 1 0.71 0.46 109993 110598 complement fr 3 0.59 0.65 109993 110481 complement fr 3 0.63 0.00 109993 110424 complement fr 3 0.71 0.60 109993 110409 complement fr 3 0.73 0.82 109993 110400 complement fr 3 0.74 0.55 109993 110361 complement fr 3 0.73 0.16 109993 110268 complement fr 3 0.69 0.81 109993 110265 complement fr 3 0.69 0.62 110909 112393 direct fr 2 0.70 0.09 110912 112393 direct fr 2 0.70 0.07 111032 112393 direct fr 2 0.72 0.22 111059 112393 direct fr 2 0.71 0.02 111128 112393 direct fr 2 0.72 0.15 111134 112393 direct fr 2 0.72 0.05 111149 112393 direct fr 2 0.73 0.18 111299 112393 direct fr 2 0.81 0.17 111323 112393 direct fr 2 0.81 0.19 112412 113578 direct fr 2 0.63 0.88 112415 113578 direct fr 2 0.63 0.82 112463 113578 direct fr 2 0.65 0.10 112487 113578 direct fr 2 0.64 0.09 112649 113578 direct fr 2 0.59 0.30 114994 116793 direct fr 1 0.71 0.08 115039 116793 direct fr 1 0.73 0.92 115111 116793 direct fr 1 0.73 0.68 115372 116793 direct fr 1 0.74 0.00 115633 116793 direct fr 1 0.79 0.01 117095 117439 complement fr 1 0.66 0.04 117095 117382 complement fr 1 0.74 0.67 117095 117352 complement fr 1 0.73 0.54 117095 117295 complement fr 1 0.65 0.13 117461 117700 complement fr 1 0.55 0.01 117461 117673 complement fr 1 0.61 0.44 118237 118626 complement fr 3 0.64 0.01 118237 118575 complement fr 3 0.72 0.29 118237 118551 complement fr 3 0.74 0.91 119449 119817 complement fr 3 0.52 0.08 119449 119748 complement fr 3 0.63 0.55 119449 119682 complement fr 3 0.65 0.66 119449 119646 complement fr 3 0.60 0.13 119449 119613 complement fr 3 0.55 0.23 119765 120103 complement fr 1 0.51 0.69 119765 120082 complement fr 1 0.55 0.79 120533 120802 complement fr 1 0.72 0.64 120533 120745 complement fr 1 0.73 0.29 120533 120733 complement fr 1 0.71 0.23 121062 121268 complement fr 2 0.59 0.44 121282 121644 complement fr 3 0.71 0.95 121282 121551 complement fr 3 0.71 0.10 121282 121512 complement fr 3 0.74 0.05 121282 121458 complement fr 3 0.71 0.34 121644 121904 complement fr 2 0.71 0.21 121644 121865 complement fr 2 0.77 0.32 121644 121799 complement fr 2 0.67 0.06 121644 121781 complement fr 2 0.64 0.08 122103 123392 direct fr 3 0.55 0.04 122166 123392 direct fr 3 0.58 0.03 122205 123392 direct fr 3 0.59 0.01 122208 123392 direct fr 3 0.59 0.01 122247 123392 direct fr 3 0.62 0.32 122346 123392 direct fr 3 0.67 0.27 122472 123392 direct fr 3 0.67 0.11 122727 123392 direct fr 3 0.66 0.03 122778 123392 direct fr 3 0.65 0.88 123829 124101 direct fr 1 0.52 0.11 123871 124101 direct fr 1 0.60 0.54 124211 124942 direct fr 2 0.70 0.80 124400 124942 direct fr 2 0.77 0.02 124424 124942 direct fr 2 0.77 0.72 124442 124942 direct fr 2 0.76 0.49 125199 125954 complement fr 2 0.81 0.75 125199 125903 complement fr 2 0.79 0.08 125199 125813 complement fr 2 0.77 0.00 125969 127618 complement fr 1 0.80 0.13 125969 127513 complement fr 1 0.84 0.11 125969 127492 complement fr 1 0.85 0.41 125969 127402 complement fr 1 0.88 0.50 125969 127201 complement fr 1 0.87 0.05 127843 128250 direct fr 1 0.54 0.07 127978 128250 direct fr 1 0.50 0.87 128293 129036 complement fr 3 0.54 0.07 128293 128949 complement fr 3 0.58 0.17 128293 128913 complement fr 3 0.58 0.13 128293 128910 complement fr 3 0.58 0.08 128293 128892 complement fr 3 0.58 0.10 128293 128859 complement fr 3 0.57 0.70 129538 129882 complement fr 3 0.52 0.02 129538 129816 complement fr 3 0.64 0.02 129538 129756 complement fr 3 0.71 0.56 129538 129702 complement fr 3 0.65 0.12 129538 129684 complement fr 3 0.59 0.02 129932 131767 complement fr 1 0.66 0.12 129932 131629 complement fr 1 0.67 0.06 129932 131599 complement fr 1 0.68 0.12 129932 131584 complement fr 1 0.68 0.01 129932 131560 complement fr 1 0.69 0.02 129932 131527 complement fr 1 0.70 0.47 129932 131494 complement fr 1 0.71 0.72 129932 131386 complement fr 1 0.70 0.21 129932 131221 complement fr 1 0.69 0.18 129932 131113 complement fr 1 0.70 0.51 132067 132741 direct fr 1 0.51 0.07 132469 132741 direct fr 1 0.55 0.45 132514 132741 direct fr 1 0.57 0.04 132610 132741 direct fr 1 0.56 0.63 132738 133463 direct fr 3 0.60 0.23 132777 133463 direct fr 3 0.63 0.53 133038 133463 direct fr 3 0.69 0.77 133125 133463 direct fr 3 0.78 0.64 133143 133463 direct fr 3 0.81 0.41 133203 133463 direct fr 3 0.81 0.23 133329 133463 direct fr 3 0.67 0.03 134002 134370 complement fr 3 0.60 0.89 134002 134340 complement fr 3 0.66 0.14 134002 134328 complement fr 3 0.69 0.13 134002 134301 complement fr 3 0.67 0.18 134002 134277 complement fr 3 0.66 0.78 135499 138222 complement fr 3 0.87 0.46 135499 138063 complement fr 3 0.88 0.49 135499 137961 complement fr 3 0.89 0.33 135499 137889 complement fr 3 0.89 0.01 138219 140192 complement fr 2 0.64 0.92 138219 140120 complement fr 2 0.64 0.02 138219 140036 complement fr 2 0.62 0.01 138219 139904 complement fr 2 0.62 0.22 138219 139901 complement fr 2 0.62 0.17 138219 139796 complement fr 2 0.65 0.80 140268 140804 complement fr 2 0.52 0.01 140268 140798 complement fr 2 0.52 0.01 140268 140711 complement fr 2 0.58 0.67 140268 140357 complement fr 2 0.54 0.82 140823 142079 complement fr 2 0.76 0.12 140823 141983 complement fr 2 0.78 0.06 140823 141872 complement fr 2 0.76 0.03 140823 141842 complement fr 2 0.75 0.55 142520 143209 complement fr 1 0.65 0.50 142520 143197 complement fr 1 0.66 0.30 142520 143053 complement fr 1 0.66 0.13 142520 142975 complement fr 1 0.68 0.06 142520 142927 complement fr 1 0.71 0.39 142520 142861 complement fr 1 0.71 0.03 143639 143956 complement fr 1 0.58 0.08 143639 143941 complement fr 1 0.60 0.63 143639 143866 complement fr 1 0.65 0.11 144135 145589 complement fr 2 0.60 0.03 144135 145583 complement fr 2 0.61 0.03 144135 145577 complement fr 2 0.61 0.01 144135 145514 complement fr 2 0.63 0.89 144135 145511 complement fr 2 0.63 0.55 144135 145508 complement fr 2 0.63 0.40 144135 145439 complement fr 2 0.66 0.02 144135 145391 complement fr 2 0.68 0.00 144135 145274 complement fr 2 0.73 0.49 144135 145223 complement fr 2 0.73 0.04 145833 146144 complement fr 2 0.70 0.74 145833 146135 complement fr 2 0.72 0.81 145833 145997 complement fr 2 0.64 0.77 146305 147723 direct fr 1 0.89 0.29 146590 147723 direct fr 1 0.89 0.58 146746 147723 direct fr 1 0.89 0.23 147724 151281 direct fr 1 0.62 0.13 148096 151281 direct fr 1 0.65 0.18 148357 151281 direct fr 1 0.66 0.22 148417 151281 direct fr 1 0.66 0.52 148552 151281 direct fr 1 0.66 0.36 148699 151281 direct fr 1 0.66 0.28 148702 151281 direct fr 1 0.66 0.11 151245 151412 complement fr 2 0.52 0.52 152727 152834 direct fr 3 0.52 0.52 153308 155455 direct fr 2 0.80 0.53 153317 155455 direct fr 2 0.80 0.46 153413 155455 direct fr 2 0.80 0.20 153422 155455 direct fr 2 0.80 0.31 153464 155455 direct fr 2 0.80 0.20 155533 156411 direct fr 1 0.79 0.98 155539 156411 direct fr 1 0.79 0.96 155599 156411 direct fr 1 0.81 0.02 155887 156411 direct fr 1 0.81 0.08 156046 156411 direct fr 1 0.84 0.66 156424 159483 direct fr 1 0.77 0.60 156568 159483 direct fr 1 0.78 0.08 156571 159483 direct fr 1 0.78 0.02 156586 159483 direct fr 1 0.78 0.31 159622 160053 direct fr 1 0.77 0.50 159859 160053 direct fr 1 0.75 0.26 159919 160053 direct fr 1 0.66 0.09 160097 160516 direct fr 2 0.56 0.94 160103 160516 direct fr 2 0.56 0.98 160106 160516 direct fr 2 0.57 0.98 160564 160905 direct fr 1 0.80 0.90 160597 160905 direct fr 1 0.86 0.61 160618 160905 direct fr 1 0.85 0.03 160639 160905 direct fr 1 0.84 0.01 161083 161595 complement fr 3 0.69 0.25 161083 161577 complement fr 3 0.71 0.27 161083 161532 complement fr 3 0.71 0.27 161083 161523 complement fr 3 0.71 0.08 161876 163411 direct fr 2 0.77 0.82 161888 163411 direct fr 2 0.78 0.83 162008 163411 direct fr 2 0.76 0.08 162050 163411 direct fr 2 0.75 0.01 162110 163411 direct fr 2 0.75 0.23 163486 171198 direct fr 1 0.85 0.64 163570 171198 direct fr 1 0.86 0.01 163669 171198 direct fr 1 0.86 0.00 163699 171198 direct fr 1 0.86 0.05 165098 165970 direct fr 2 0.79 0.89 165122 165970 direct fr 2 0.81 0.63 165146 165970 direct fr 2 0.84 0.03 165149 165970 direct fr 2 0.84 0.03 165218 165970 direct fr 2 0.83 0.36 171264 172064 direct fr 3 0.83 0.11 171288 172064 direct fr 3 0.85 0.28 171387 172064 direct fr 3 0.89 0.48 171390 172064 direct fr 3 0.89 0.47 171426 172064 direct fr 3 0.89 0.04 172061 172945 direct fr 2 0.82 0.71 172166 172945 direct fr 2 0.86 0.07 172217 172945 direct fr 2 0.85 0.48 172310 172945 direct fr 2 0.83 0.04 173452 173604 direct fr 1 0.58 0.07 173461 173604 direct fr 1 0.55 0.03 173479 173604 direct fr 1 0.51 0.05 173862 174296 direct fr 3 0.54 0.03 173895 174296 direct fr 3 0.57 0.24 173913 174296 direct fr 3 0.58 0.61 174027 174296 direct fr 3 0.52 0.06 174296 175669 direct fr 2 0.68 0.81 174392 175669 direct fr 2 0.70 0.73 174416 175669 direct fr 2 0.70 0.53 174440 175669 direct fr 2 0.69 0.11 175669 175959 direct fr 1 0.67 0.17 175672 175959 direct fr 1 0.67 0.12 175732 175959 direct fr 1 0.76 0.54 175756 175959 direct fr 1 0.74 0.34 175786 175959 direct fr 1 0.73 0.01 175959 178811 direct fr 3 0.82 0.46 175983 178811 direct fr 3 0.82 0.52 176100 178811 direct fr 3 0.83 0.08 176154 178811 direct fr 3 0.83 0.08 176190 178811 direct fr 3 0.84 0.16 176274 178811 direct fr 3 0.85 0.06 176316 178811 direct fr 3 0.85 0.10 178983 180437 direct fr 3 0.80 0.27 179067 180437 direct fr 3 0.80 0.66 179235 180437 direct fr 3 0.80 0.07 179271 180437 direct fr 3 0.82 0.75 179289 180437 direct fr 3 0.83 0.71 180483 180947 direct fr 3 0.52 0.28 180600 180947 direct fr 3 0.68 0.66 180624 180947 direct fr 3 0.72 0.20 180699 180947 direct fr 3 0.75 0.37 180708 180947 direct fr 3 0.75 0.19 180714 180947 direct fr 3 0.73 0.14 180981 181583 direct fr 3 0.77 0.68 181056 181583 direct fr 3 0.78 0.35 181119 181583 direct fr 3 0.75 0.01 181134 181583 direct fr 3 0.74 0.00 181588 182316 direct fr 1 0.56 0.90 181600 182316 direct fr 1 0.57 0.68 181675 182316 direct fr 1 0.58 0.23 181786 182316 direct fr 1 0.57 0.03 181834 182316 direct fr 1 0.56 0.81 183639 184940 complement fr 2 0.74 0.51 183639 184937 complement fr 2 0.74 0.22 183639 184916 complement fr 2 0.76 0.08 183639 184748 complement fr 2 0.84 0.61 183639 184724 complement fr 2 0.83 0.42 183639 184673 complement fr 2 0.83 0.48 184937 186043 complement fr 1 0.71 0.01 184937 185998 complement fr 1 0.74 0.04 184937 185902 complement fr 1 0.78 0.08 184937 185842 complement fr 1 0.79 0.15 184937 185836 complement fr 1 0.79 0.25 186043 186693 complement fr 3 0.61 0.03 186043 186663 complement fr 3 0.64 0.28 186043 186570 complement fr 3 0.68 0.49 186043 186549 complement fr 3 0.68 0.24 186043 186537 complement fr 3 0.67 0.11 187757 190507 direct fr 2 0.72 0.01 187811 190507 direct fr 2 0.73 0.13 187865 190507 direct fr 2 0.74 0.22 187868 190507 direct fr 2 0.74 0.16 187880 190507 direct fr 2 0.74 0.01 190627 191481 direct fr 1 0.73 0.25 190696 191481 direct fr 1 0.77 0.09 190789 191481 direct fr 1 0.74 0.17 190888 191481 direct fr 1 0.73 0.32 191549 191770 complement fr 1 0.52 0.09 191549 191731 complement fr 1 0.52 0.88 191549 191725 complement fr 1 0.52 0.87 192041 193081 complement fr 1 0.75 0.14 192041 192961 complement fr 1 0.78 0.40 192041 192931 complement fr 1 0.77 0.07 192041 192901 complement fr 1 0.76 0.04 193426 194640 complement fr 3 0.71 0.77 193426 194637 complement fr 3 0.71 0.65 193426 194541 complement fr 3 0.72 0.02 193426 194460 complement fr 3 0.71 0.66 193426 194424 complement fr 3 0.70 0.15 194637 195527 complement fr 2 0.73 0.84 194637 195518 complement fr 2 0.73 0.56 194637 195425 complement fr 2 0.73 0.07 194637 195248 complement fr 2 0.69 0.20 194637 195176 complement fr 2 0.65 0.19 195540 196031 complement fr 2 0.65 0.01 195540 195956 complement fr 2 0.73 0.59 195540 195950 complement fr 2 0.73 0.64 195540 195884 complement fr 2 0.67 0.10 196787 197920 direct fr 2 0.86 0.60 196955 197920 direct fr 2 0.89 0.29 197045 197920 direct fr 2 0.88 0.23 197066 197920 direct fr 2 0.87 0.26 197996 199984 direct fr 2 0.80 0.51 198002 199984 direct fr 2 0.81 0.15 198083 199984 direct fr 2 0.83 0.12 198311 199984 direct fr 2 0.83 0.63 198347 199984 direct fr 2 0.84 0.21 198452 199984 direct fr 2 0.83 0.02 199984 200304 direct fr 1 0.53 0.57 200038 200304 direct fr 1 0.61 0.05 200056 200304 direct fr 1 0.64 0.21 200092 200304 direct fr 1 0.63 0.17 200128 200304 direct fr 1 0.62 0.08 200549 201049 direct fr 2 0.88 0.50 200567 201049 direct fr 2 0.89 0.65 200657 201049 direct fr 2 0.90 0.02 200675 201049 direct fr 2 0.90 0.18 200690 201049 direct fr 2 0.89 0.16 201046 203766 direct fr 1 0.82 0.71 201352 203766 direct fr 1 0.82 0.50 201616 203766 direct fr 1 0.82 0.35 201817 203766 direct fr 1 0.84 0.02 201841 203766 direct fr 1 0.84 0.01 203779 204213 direct fr 1 0.84 0.79 203821 204213 direct fr 1 0.93 0.16 203887 204213 direct fr 1 0.92 0.20 203956 204213 direct fr 1 0.90 0.06 204561 204653 direct fr 3 0.50 0.45 204764 205078 complement fr 1 0.62 0.15 204764 205075 complement fr 1 0.62 0.10 204764 204985 complement fr 1 0.67 0.32 204764 204949 complement fr 1 0.62 0.08 204764 204925 complement fr 1 0.57 0.07 205405 205905 direct fr 1 0.64 0.27 205435 205905 direct fr 1 0.67 0.08 205504 205905 direct fr 1 0.75 0.38 205579 205905 direct fr 1 0.73 0.17 205675 205905 direct fr 1 0.63 0.38 205678 205905 direct fr 1 0.63 0.36 205902 206603 direct fr 3 0.62 0.39 205905 206603 direct fr 3 0.62 0.44 206028 206603 direct fr 3 0.62 0.01 206046 206603 direct fr 3 0.60 0.11 206112 206603 direct fr 3 0.56 0.03 206745 208229 direct fr 3 0.93 0.73 206754 208229 direct fr 3 0.93 0.95 206832 208229 direct fr 3 0.96 0.02 207042 208229 direct fr 3 0.95 0.37 207138 208229 direct fr 3 0.95 0.09 208244 208795 direct fr 2 0.80 0.92 208283 208795 direct fr 2 0.82 0.12 208376 208795 direct fr 2 0.78 0.04 208813 209784 direct fr 1 0.87 0.96 208885 209784 direct fr 1 0.88 0.09 208972 209784 direct fr 1 0.88 0.57 209131 209784 direct fr 1 0.85 0.26 209818 210981 complement fr 3 0.60 0.22 209818 210954 complement fr 3 0.61 0.31 209818 210909 complement fr 3 0.63 0.04 209818 210849 complement fr 3 0.65 0.65 209818 210831 complement fr 3 0.65 0.45 209818 210747 complement fr 3 0.62 0.02 210996 211364 direct fr 3 0.62 0.01 211053 211364 direct fr 3 0.74 0.25 211074 211364 direct fr 3 0.79 0.13 211101 211364 direct fr 3 0.80 0.54 211119 211364 direct fr 3 0.80 0.84 211333 211686 direct fr 1 0.66 0.04 211387 211686 direct fr 1 0.76 0.72 211432 211686 direct fr 1 0.77 0.08 211673 212251 direct fr 2 0.74 0.66 211706 212251 direct fr 2 0.79 0.31 211715 212251 direct fr 2 0.79 0.54 211865 212251 direct fr 2 0.74 0.08 213053 214456 direct fr 2 0.85 0.64 213329 214456 direct fr 2 0.88 0.71 213353 214456 direct fr 2 0.90 0.84 213419 214456 direct fr 2 0.90 0.06 213425 214456 direct fr 2 0.90 0.06 214495 215280 direct fr 1 0.91 0.76 214702 215280 direct fr 1 0.89 0.09 214894 215280 direct fr 1 0.87 0.49 215468 215776 direct fr 2 0.51 0.10 215507 215776 direct fr 2 0.57 0.33 215561 215776 direct fr 2 0.56 0.25 215582 215776 direct fr 2 0.53 0.11 215600 215776 direct fr 2 0.50 0.11 215828 216535 direct fr 2 0.67 0.85 215918 216535 direct fr 2 0.70 0.41 215957 216535 direct fr 2 0.69 0.57 215960 216535 direct fr 2 0.69 0.47 216648 217247 direct fr 3 0.76 0.09 216915 217247 direct fr 3 0.91 0.11 217011 217247 direct fr 3 0.90 0.56 217083 217247 direct fr 3 0.86 0.16 217528 218112 direct fr 1 0.73 0.60 217615 218112 direct fr 1 0.80 0.45 217618 218112 direct fr 1 0.80 0.52 217720 218112 direct fr 1 0.77 0.51 218564 219262 direct fr 2 0.52 0.02 218612 219262 direct fr 2 0.55 0.35 218624 219262 direct fr 2 0.56 0.19 218726 219262 direct fr 2 0.59 0.41 218786 219262 direct fr 2 0.55 0.00 219420 219875 direct fr 3 0.60 0.25 219429 219875 direct fr 3 0.62 0.09 219474 219875 direct fr 3 0.67 0.09 219954 221831 direct fr 3 0.90 0.89 219963 221831 direct fr 3 0.90 0.74 220008 221831 direct fr 3 0.91 0.28 220155 221831 direct fr 3 0.91 0.57 220335 221831 direct fr 3 0.90 0.01 221887 222114 direct fr 1 0.71 0.81 221911 222114 direct fr 1 0.78 0.46 222131 222598 direct fr 2 0.82 0.54 222197 222598 direct fr 2 0.87 0.44 222233 222598 direct fr 2 0.85 0.03 222239 222598 direct fr 2 0.85 0.04 222786 222995 direct fr 3 0.56 0.78 222873 222995 direct fr 3 0.55 0.06 223125 224588 direct fr 3 0.91 0.34 223182 224588 direct fr 3 0.94 0.30 223248 224588 direct fr 3 0.96 0.52 223296 224588 direct fr 3 0.95 0.07 224621 225385 direct fr 2 0.74 0.17 224663 225385 direct fr 2 0.77 0.33 224789 225385 direct fr 2 0.81 0.21 224828 225385 direct fr 2 0.80 0.23 224837 225385 direct fr 2 0.79 0.27 225398 226207 direct fr 2 0.87 0.15 225404 226207 direct fr 2 0.87 0.42 225476 226207 direct fr 2 0.91 0.22 225569 226207 direct fr 2 0.90 0.30 225578 226207 direct fr 2 0.90 0.37 226233 226595 direct fr 3 0.85 0.88 226380 226595 direct fr 3 0.86 0.22 226407 226595 direct fr 3 0.84 0.01 226449 226595 direct fr 3 0.80 0.05 226626 227003 direct fr 3 0.74 0.55 226752 227003 direct fr 3 0.71 0.09 226902 227003 direct fr 3 0.54 0.07 227067 227336 direct fr 3 0.73 0.45 227139 227336 direct fr 3 0.75 0.12 227587 227949 direct fr 1 0.50 0.38 227974 228723 direct fr 1 0.56 0.23 228031 228723 direct fr 1 0.60 0.03 228196 228723 direct fr 1 0.57 0.35 228352 228723 direct fr 1 0.63 0.69 228397 228723 direct fr 1 0.58 0.09 228704 230458 direct fr 2 0.63 0.03 228776 230458 direct fr 2 0.65 0.00 228926 230458 direct fr 2 0.69 0.42 229052 230458 direct fr 2 0.67 0.01 229220 230458 direct fr 2 0.66 0.23 230594 230827 direct fr 2 0.53 0.10 230645 230827 direct fr 2 0.59 0.54 230925 231890 direct fr 3 0.56 0.14 230976 231890 direct fr 3 0.59 0.69 230985 231890 direct fr 3 0.60 0.75 231105 231890 direct fr 3 0.56 0.08 231315 231890 direct fr 3 0.63 0.16 231366 231890 direct fr 3 0.62 0.01 231950 232249 direct fr 2 0.59 0.05 231965 232249 direct fr 2 0.62 0.43 231980 232249 direct fr 2 0.64 0.25 232070 232249 direct fr 2 0.66 0.37 232106 232249 direct fr 2 0.58 0.13 232112 232249 direct fr 2 0.58 0.03 232263 233960 direct fr 3 0.72 0.05 232332 233960 direct fr 3 0.74 0.07 232344 233960 direct fr 3 0.74 0.13 232347 233960 direct fr 3 0.74 0.09 232365 233960 direct fr 3 0.74 0.54 232407 233960 direct fr 3 0.74 0.07 232413 233960 direct fr 3 0.74 0.04 232425 233960 direct fr 3 0.74 0.08 234044 234568 direct fr 2 0.75 0.60 234128 234568 direct fr 2 0.85 0.96 234149 234568 direct fr 2 0.86 0.60 234212 234568 direct fr 2 0.85 0.74 234704 234838 direct fr 2 0.59 0.43 234710 234838 direct fr 2 0.55 0.75 234882 235685 direct fr 3 0.79 0.02 234960 235685 direct fr 3 0.80 0.73 235029 235685 direct fr 3 0.80 0.23 235770 236045 complement fr 2 0.52 0.89 235770 236036 complement fr 2 0.50 0.81 236148 238019 direct fr 3 0.81 0.09 236166 238019 direct fr 3 0.82 0.52 236181 238019 direct fr 3 0.83 0.30 236208 238019 direct fr 3 0.83 0.12 236313 238019 direct fr 3 0.86 0.03 236346 238019 direct fr 3 0.86 0.80 236469 238019 direct fr 3 0.86 0.11 238138 239613 direct fr 1 0.87 0.68 238186 239613 direct fr 1 0.87 0.18 238579 239613 direct fr 1 0.86 0.22 238582 239613 direct fr 1 0.86 0.14 List of Regions of interest (regions from stop to stop codon w/ a signal in between) LEnd REnd Strand Frame -------- -------- ----------- ----- 57 3119 complement fr 2 2682 3026 direct fr 3 3199 4014 direct fr 1 4081 4689 direct fr 1 4590 5024 direct fr 3 5372 5629 direct fr 2 5378 5719 complement fr 1 5661 5798 complement fr 2 5831 6421 direct fr 2 6594 7457 direct fr 3 7399 8673 complement fr 3 8707 8868 direct fr 1 8981 10018 direct fr 2 10479 11198 direct fr 3 11271 11762 direct fr 3 11884 12822 direct fr 1 12795 13862 direct fr 3 14574 15275 direct fr 3 14637 14849 complement fr 2 15298 15963 direct fr 1 15944 16261 direct fr 2 16259 17842 direct fr 2 16523 17257 complement fr 1 17264 17680 complement fr 1 17800 18609 direct fr 1 18607 19089 direct fr 1 19160 19441 direct fr 2 19472 20170 direct fr 2 20140 22425 direct fr 1 22511 23065 direct fr 2 23041 23661 direct fr 1 23658 23858 complement fr 2 23670 24179 direct fr 3 24241 25179 complement fr 3 24565 24954 direct fr 1 24993 26678 complement fr 2 25161 25568 direct fr 3 27015 28493 complement fr 2 28537 28809 complement fr 3 29448 30260 complement fr 2 30054 30320 direct fr 3 30194 30769 complement fr 1 30760 32088 complement fr 3 31962 32705 complement fr 2 31998 32405 direct fr 3 32532 32816 direct fr 3 32686 33564 complement fr 3 32704 33459 direct fr 1 33513 34580 complement fr 2 34418 35563 complement fr 1 35542 36174 complement fr 3 36128 36649 complement fr 1 36625 37872 complement fr 3 37870 38706 complement fr 3 38687 39562 complement fr 1 39570 40505 complement fr 2 40995 41615 direct fr 3 41013 41348 complement fr 2 41613 42419 direct fr 3 41904 42374 complement fr 2 42473 45946 direct fr 2 43040 43480 complement fr 1 43478 44035 complement fr 1 45976 46611 direct fr 1 46873 47205 complement fr 3 47230 47877 complement fr 3 48296 49021 direct fr 2 49028 49387 complement fr 1 49354 50124 complement fr 3 50152 51210 direct fr 1 51208 52965 direct fr 1 51262 51768 complement fr 3 51766 51984 complement fr 3 52932 53576 direct fr 3 53663 53875 direct fr 2 53851 54468 direct fr 1 54466 55170 direct fr 1 55168 55806 direct fr 1 55828 56370 direct fr 1 56035 56442 complement fr 3 56842 57477 direct fr 1 57502 58539 complement fr 3 58560 59180 complement fr 2 59178 60101 complement fr 2 60080 60865 complement fr 1 60644 60808 direct fr 2 60910 62385 direct fr 1 61281 61655 direct fr 3 62797 63993 complement fr 3 63262 63558 direct fr 1 63872 65053 complement fr 1 65305 66762 complement fr 3 67058 67345 direct fr 2 67406 68761 complement fr 1 67547 67828 direct fr 2 67964 68218 direct fr 2 68911 69360 complement fr 3 69303 69689 direct fr 3 69456 70571 complement fr 2 70694 71833 direct fr 2 70759 71175 complement fr 3 71273 71620 complement fr 1 71852 72277 complement fr 1 72244 73590 direct fr 1 73654 79395 direct fr 1 79356 80933 direct fr 3 80927 82546 direct fr 2 82693 83982 complement fr 3 83059 83901 direct fr 1 83981 84421 direct fr 2 84509 85279 complement fr 1 85351 86652 complement fr 3 85993 86451 direct fr 1 86782 87636 direct fr 1 87582 88634 direct fr 3 88604 90184 direct fr 2 90266 91858 direct fr 2 91856 92488 direct fr 2 92473 92922 direct fr 1 92659 92979 complement fr 3 92915 93748 direct fr 2 93829 95529 direct fr 1 95527 96240 direct fr 1 96460 98727 complement fr 3 96751 96978 direct fr 1 98746 99633 direct fr 1 99103 99342 complement fr 3 99590 100066 direct fr 2 100064 101722 direct fr 2 101688 103088 direct fr 3 103082 103669 direct fr 2 103667 105556 direct fr 2 105538 106638 direct fr 1 106777 107382 direct fr 1 107389 108573 direct fr 1 108574 109053 direct fr 1 108995 109996 direct fr 2 109993 110604 complement fr 3 110891 112393 direct fr 2 111983 112174 complement fr 1 112391 113578 direct fr 2 113520 114638 complement fr 2 114636 114992 complement fr 2 114991 116793 direct fr 1 115159 115650 complement fr 3 116833 117138 complement fr 3 116927 117331 direct fr 2 117095 117457 complement fr 1 117461 117781 complement fr 1 117860 118387 complement fr 1 118237 118635 complement fr 3 118580 119077 complement fr 1 119449 119904 complement fr 3 119765 120121 complement fr 1 120533 120835 complement fr 1 121062 121304 complement fr 2 121282 121659 complement fr 3 121644 121931 complement fr 2 122031 123392 direct fr 3 122175 123200 complement fr 2 123390 123683 direct fr 3 123811 124101 direct fr 1 124208 124942 direct fr 2 124905 125126 direct fr 3 125072 125260 complement fr 1 125199 126017 complement fr 2 125373 125789 direct fr 3 125969 127657 complement fr 1 127322 127609 direct fr 2 127584 127796 direct fr 3 127621 128250 direct fr 1 128293 129063 complement fr 3 129287 129556 complement fr 1 129538 129894 complement fr 3 129932 131860 complement fr 1 132016 132741 direct fr 1 132711 133463 direct fr 3 133490 133747 direct fr 2 133523 134017 complement fr 1 133606 133989 direct fr 1 134002 134376 complement fr 3 134357 134974 complement fr 1 134980 135396 complement fr 3 135499 138246 complement fr 3 136084 136854 direct fr 1 138219 140231 complement fr 2 138453 138725 direct fr 3 140268 140825 complement fr 2 140823 142091 complement fr 2 142135 142488 complement fr 3 142520 143212 complement fr 1 143639 143968 complement fr 1 144135 145592 complement fr 2 145480 145869 complement fr 3 145833 146183 complement fr 2 146242 147723 direct fr 1 147721 151281 direct fr 1 147949 148275 complement fr 3 150226 150612 complement fr 3 151245 153251 complement fr 2 152643 152834 direct fr 3 153245 155455 direct fr 2 155509 156411 direct fr 1 156409 159483 direct fr 1 159607 160053 direct fr 1 160085 160516 direct fr 2 160525 160905 direct fr 1 161083 161637 complement fr 3 161726 163411 direct fr 2 163465 171198 direct fr 1 165077 165970 direct fr 2 171162 172064 direct fr 3 172055 172945 direct fr 2 173275 173604 direct fr 1 173790 174296 direct fr 3 174260 175669 direct fr 2 174593 174763 complement fr 1 175651 175959 direct fr 1 175950 178811 direct fr 3 176630 176884 complement fr 1 178914 180437 direct fr 3 180474 180947 direct fr 3 180948 181583 direct fr 3 181570 182316 direct fr 1 182411 183577 complement fr 1 182456 182938 direct fr 2 183639 184943 complement fr 2 184937 186124 complement fr 1 186043 186708 complement fr 3 186091 186267 direct fr 1 186706 187299 complement fr 3 187323 187868 direct fr 3 187622 190507 direct fr 2 190606 191481 direct fr 1 191549 192043 complement fr 1 192041 193096 complement fr 1 193426 194643 complement fr 3 194227 194781 direct fr 1 194637 195542 complement fr 2 195204 195923 direct fr 3 195540 196052 complement fr 2 196766 197920 direct fr 2 197987 199984 direct fr 2 198230 199231 complement fr 1 199633 200304 direct fr 1 200495 201049 direct fr 2 201013 203766 direct fr 1 203764 204213 direct fr 1 204210 204818 complement fr 2 204285 204653 direct fr 3 204764 205090 complement fr 1 205378 205905 direct fr 1 205881 206603 direct fr 3 206025 206486 complement fr 2 206730 208229 direct fr 3 208193 208795 direct fr 2 208765 209784 direct fr 1 209818 210987 complement fr 3 209914 210546 direct fr 1 210993 211364 direct fr 3 211120 211686 direct fr 1 211652 212251 direct fr 2 212480 212890 complement fr 1 213005 213571 complement fr 1 213032 214456 direct fr 2 214294 215280 direct fr 1 215402 215776 direct fr 2 215816 216535 direct fr 2 216612 217247 direct fr 3 217522 218112 direct fr 1 218125 218403 direct fr 1 218525 219262 direct fr 2 219396 219875 direct fr 3 219936 221831 direct fr 3 221854 222114 direct fr 1 222095 222598 direct fr 2 222094 222711 complement fr 3 222696 223277 complement fr 2 222768 222995 direct fr 3 222922 223224 direct fr 1 223071 224588 direct fr 3 224594 225385 direct fr 2 225383 226207 direct fr 2 226056 226595 direct fr 3 226593 227003 direct fr 3 227001 227336 direct fr 3 227455 227949 direct fr 1 227947 228723 direct fr 1 228103 228459 complement fr 3 228659 230458 direct fr 2 228716 228994 complement fr 1 229628 229792 complement fr 1 230537 230827 direct fr 2 230907 231890 direct fr 3 231935 232249 direct fr 2 232212 233960 direct fr 3 234017 234568 direct fr 2 234605 234838 direct fr 2 234810 235685 direct fr 3 235770 236162 complement fr 2 236112 238019 direct fr 3 238087 239613 direct fr 1 238320 238787 complement fr 2 POSSIBLE SEQUENCE FRAMESHIFTS DETECTED From To Frame Frame At base... ----- ----- ---------- 1 3 61416 +/- 11 bp (direct) 3 1 118308 +/- 11 bp (complement) 1 2 165144 +/- 11 bp (direct) 2 1 165900 +/- 11 bp (direct) -------------------- ABOUT THE MATRIX USED: Training set derived by GeneMarkS, 4.6a Fri Apr 20 17:17:10 2007