LOCUS       NC_000957               5228 bp    DNA     linear   BCT 30-MAR-2006
DEFINITION  Borrelia burgdorferi B31 plasmid lp5, complete sequence.
ACCESSION   NC_000957
VERSION     NC_000957.1  GI:11497445
KEYWORDS    .
SOURCE      Borrelia burgdorferi B31
  ORGANISM  Borrelia burgdorferi B31
            Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Borrelia;
            Borrelia burgdorferi group.
REFERENCE   1  (bases 1 to 5228)
  AUTHORS   Fraser,C.M., Casjens,S., Huang,W.M., Sutton,G.G., Lathigra,R.,
            White,O., Dodson,R., Hickey,E.K., Gwinn,M., Peterson,J.,
            van-Vugt,R., Palmer,N., Haft,D., Rosa,P. and Stevenson,B.
  TITLE     A bacterial genome in flux: the twelve linear and nine circular
            extrachromosomal DNAs in an infectious isolate of the Lyme disease
            spirochete Borrelia burgdorferi
  JOURNAL   Mol. Microbiol. 35 (3), 490-516 (2000)
   PUBMED   10672174
REFERENCE   2  (bases 1 to 5228)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-DEC-2000) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 5228)
  AUTHORS   Fraser,C.M., Casjens,S., Huang,W.M., Sutton,G.G., Lathigra,R.,
            White,O., Dodson,R., Hickey,E.K., Gwinn,M., Peterson,J.,
            van-Vugt,R., Palmer,N., Haft,D., Rosa,P. and Stevenson,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-1999) The Institute for Genomic Research, 9712
            Medical Center Dr, Rockville, MD 20850, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AE001583.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5228
                     /organism="Borrelia burgdorferi B31"
                     /mol_type="genomic DNA"
                     /strain="B31"
                     /db_xref="taxon:224326"
                     /plasmid="lp5"
     gene            195..638
                     /locus_tag="BB_T01"
                     /db_xref="GeneID:1194835"
     CDS             195..638
                     /locus_tag="BB_T01"
                     /note="hypothetical protein; identified by Glimmer2;
                     putative"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_051538.1"
                     /db_xref="GI:11497450"
                     /db_xref="GeneID:1194835"
                     /translation="MGNYQYFFNLFFIFKIIFIYLYIMYKAIKEQQEIEIDHACRILI
                     LTATIFEINSIFENYYQKTLLKKYNENLKNKNLPPSNISTMKKYLNQLEKEIKIIAKF
                     YFKNDQSLIYCKLNYTLEKICLKLIKFYKKFYKELKQFTQKNITT"
     gene            744..1097
                     /locus_tag="BB_T02"
                     /db_xref="GeneID:1194831"
     CDS             744..1097
                     /locus_tag="BB_T02"
                     /note="similar to GP:1142590 percent identity: 94.44;
                     identified by sequence similarity; putative"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_051539.1"
                     /db_xref="GI:11497446"
                     /db_xref="GeneID:1194831"
                     /translation="MEKSLKEILGMNSKNKLSSHLIILIYTLNNINLNLNIEYYNRGF
                     IRRAFTFNVDRYCNTSKDIEIDIDLLIKYLDILENNLKIIANKYKVEKNIFKLYYIIN
                     YPLKICYTKIRNYYK"
     gene            1208..1576
                     /locus_tag="BB_T03"
                     /db_xref="GeneID:1194836"
     CDS             1208..1576
                     /locus_tag="BB_T03"
                     /note="hypothetical protein; identified by Glimmer2;
                     putative"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_051540.1"
                     /db_xref="GI:11497451"
                     /db_xref="GeneID:1194836"
                     /translation="MNGIINDTLVARITKQIKFAKNKLIILVKTLDHMNQELFYSENK
                     DYTHLLIKSKFNLALAKTTQHEVNYKTLLEYLEILEKNPKVIVKCPTNKENESFIGRY
                     TLLYPLEVCCTKIYNLHPNI"
     gene            2148..3254
                     /locus_tag="BB_T04"
                     /db_xref="GeneID:1194832"
     CDS             2148..3254
                     /locus_tag="BB_T04"
                     /note="similar to PID:1174341 PID:1174349 GB:AE001584
                     percent identity: 82.63; identified by sequence
                     similarity; putative"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_051541.1"
                     /db_xref="GI:11497447"
                     /db_xref="GeneID:1194832"
                     /translation="MNSKTTNKTNRNCYNKVQHKLIVLISTICYLNKTHKKYTQKTIL
                     YYFNENLRKNGQTISTLRTMQKYIYRLQKEIKVTTNYYQHMGVNSGTEIYYKLNYPKK
                     DCYHKINQHFKEKKEERYQNRVANYFNKNSDSKMGSVQLGECNNNNNNIKEERKINEI
                     EKYQVIKYFNKCDFSCKEILPVLLTLNIDKENIIKIIKILKITEINSKNKNIRPTKSC
                     IKKKQEKLKGILCNTQKELEENGYNPKQLEINFQKIYENYKYKPHFIIENHKYSDLNN
                     IKRKLEKSIERKKENSQQDYENLKINVFNILIEQLKKETNIEILKPIIKEYLNNQKKI
                     KYNKIFGIYYLELLEIIKNRKHDLNLEKFSKKVV"
     gene            3340..4332
                     /locus_tag="BB_T06"
                     /db_xref="GeneID:1194833"
     CDS             3340..4332
                     /locus_tag="BB_T06"
                     /note="similar to SP:P39153 PID:556881 GB:AL009126 percent
                     identity: 57.36; identified by sequence similarity;
                     putative"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="NP_051542.1"
                     /db_xref="GI:11497448"
                     /db_xref="GeneID:1194833"
                     /translation="MIKTPIISEDQFKIALKLIKMGEIIVFPTDTVYAIGANIYDEYA
                     VRMINLVKKKSINEPLMLYVDTIEKIKELSSHVPKSAKILMEKFSPGPLTYVLKKSIK
                     IPKFINNNLDTVAIRIPKNKTALNLIRKLKNPLVVSSANLSKRPSSTSFSMALKELNG
                     LVGGIIMPKKNKDSNIGIESTIIEFDSKDNVIILRPGAITKKMIEKVLGSRYKVNYAK
                     ETKIDLKKMFSYRLRIPVHTFKRGDNIRKYLKTNTKVLITRDTFKFYFFSFLWDKKNI
                     ILFDSLIEYAENLYKELVNAEEKYDQVIVEIVENEELGYAINNRIVKASSNNFM"
     gene            4388..4819
                     /locus_tag="BB_T07"
                     /db_xref="GeneID:1194834"
     CDS             4388..4819
                     /locus_tag="BB_T07"
                     /note="similar to GB:L31615 GB:L31418 PID:520783
                     PID:551742 percent identity: 61.90; identified by sequence
                     similarity; putative"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein"
                     /protein_id="NP_051543.1"
                     /db_xref="GI:11497449"
                     /db_xref="GeneID:1194834"
                     /translation="MENIFEYLKLNAVEICVLKDIKKVIYKFYESILDIENDAETINI
                     LSPXKSQNILNEFFFNLGPKKSKELINLFRKIKVKLGDNVFENKVFIFYLCLDDVDFF
                     KLLYVLDKSNFDDYLILIYEKFLAIRKDLKLILNNYGSNNL"
ORIGIN      
        1 ggagtatttt gactcaaaac tttacccttt aaattactaa atttaacttg aaaatactaa
       61 actttaaccc aaaataataa aactttaact tgaatttttc aaaattacaa aactttaacc
      121 caaaatgata aaactttaat tttttgtaat ttttacataa aagtgttaac tttaaaatcc
      181 caaactttat aattttggga aattatcaat acttttttaa tttattcttt attttcaaaa
      241 taatctttat atacttatat attatgtata aggctataaa agaacaacaa gaaatagaaa
      301 tagatcatgc atgcagaata cttattctta ccgcaacaat atttgaaata aattcaatat
      361 tcgaaaatta ttatcaaaaa actctactca aaaagtataa cgaaaatctc aaaaacaaaa
      421 atctacctcc tagtaatata tcaacaatga aaaaatactt aaatcaatta gaaaaagaaa
      481 taaaaatcat agcaaaattc tattttaaaa acgatcaatc tctaatttat tgcaaactta
      541 attataccct agaaaaaatt tgtttaaaac taataaaatt ctacaaaaaa ttctacaaag
      601 aattaaaaca atttacacaa aagaacatta ctacttaatt gtaaatacat tataaaataa
      661 tcttatgcaa atatttagaa atacaaattg taaagatata tatttttatt taaataaata
      721 ataaaaattg ctggcacact aatttggaaa aatctttaaa agaaatacta ggtatgaata
      781 gcaaaaataa gctatcttca cacttaataa ttcttattta cacactaaac aatattaatc
      841 taaatttaaa tattgagtac tataataggg ggtttatacg ccgtgcgttt acttttaacg
      901 tagatagata ttgcaatact agtaaagata ttgaaataga catagactta ctaataaagt
      961 atctagatat tttagaaaac aatctaaaaa tcatagctaa taaatataaa gtagaaaaaa
     1021 atatattcaa actttactac ataatcaatt atcctttaaa aatatgttac acaaaaatta
     1081 ggaactacta taaatagact atataatggt ttaacgccaa aaaatactgc actatattta
     1141 caatataatg gtttaacgcc aaaaaatact gcactatatt tacaatataa tagggggcta
     1201 attcattatg aatggaataa ttaacgatac actggtcgca agaataacaa agcaaattaa
     1261 atttgctaag aataagttaa tcattcttgt caaaacacta gatcacatga atcaagaatt
     1321 gttctatagt gaaaacaaag attatactca tttattaata aaaagcaagt ttaatcttgc
     1381 tctagctaaa acgactcaac acgaagttaa ttataaaacc ctattagaat atcttgaaat
     1441 attagaaaaa aatccaaaag taatcgtaaa atgtcccaca aataaagaaa atgaaagctt
     1501 tataggccgt tatacactcc tttacccttt agaagtttgt tgcactaaaa tttataatct
     1561 tcatcctaat atttaagcta atataatcca gaaaatttac tataatcgat tatataaata
     1621 gtaaaccaat atctatccta gtatattatg gcctataata ggcccaataa agaatatttt
     1681 gatctataaa tgatcaatcc ataaaggact atatgtcttt tatggatttt gaacataaat
     1741 aattacttaa ttaccaatat aaagctaaat acaaaataaa tccaatatat ctttaaattc
     1801 tagaaaattt ttaatctaaa aaaatcatta ttatagtgcc caaaacaaaa taaaacttaa
     1861 actgggaaaa ttagtgttac ataaaatgaa tagggcttaa gacaaattct ttataaaaaa
     1921 cttgctttaa gccctatttc acgatcactt ctttgtaatt cgaactctcg tcgaactatt
     1981 tatagtataa caaaaattaa accatagtca agttgtattt taaataaatt ttaatctcaa
     2041 ttactaaaac tttacaatat aactaaaatt gctataagag tatttacttt tatagcaatt
     2101 ttagttatat tgtaaaatga tcaccataat tgtaaggaga agtctctatg aattcaaaaa
     2161 caacaaataa aaccaataga aattgctata ataaagttca acacaaatta atagttctta
     2221 tttcaacaat atgctatcta aacaaaacac ataagaaata tacacaaaaa accatactct
     2281 attactttaa tgaaaatcta agaaaaaacg gtcaaactat ttctacacta agaactatgc
     2341 aaaagtatat ctatagacta caaaaagaaa taaaagtcac aacaaactac tatcaacata
     2401 tgggggtaaa ttcgggtacg gaaatttatt acaagcttaa ttatcctaaa aaagattgtt
     2461 atcataaaat aaaccagcac tttaaagaaa aaaaagaaga aagataccaa aatagagttg
     2521 ccaactattt caacaaaaat tctgattcaa aaatgggtag tgtgcaattg ggggagtgta
     2581 ataataataa taataatata aaagaagaaa gaaaaattaa cgaaatagaa aagtatcaag
     2641 taataaaata cttcaacaag tgtgactttt catgtaaaga aattcttcca gttttattaa
     2701 cattaaatat tgataaagaa aacataatta aaataataaa aatcctaaaa ataaccgaaa
     2761 ttaactcaaa aaataaaaat atacgcccta ctaaatcttg tattaaaaaa aaacaagaaa
     2821 aattaaaggg aattctatgt aacactcaaa aagaattaga agaaaacggg tacaatccca
     2881 aacaattaga aataaatttt caaaaaatat acgaaaatta caaatataaa ccccatttta
     2941 ttattgaaaa tcataaatat agcgatttaa acaacataaa acgtaaattg gaaaagtcaa
     3001 ttgaaagaaa aaaagaaaat tctcaacaag attatgaaaa tttaaagata aacgttttca
     3061 atatccttat tgaacaacta aaaaaagaaa caaatattga aattctaaag cctattataa
     3121 aagaatattt gaataaccaa aaaaaaataa aatacaacaa aatatttggc atatattatc
     3181 ttgaattact agaaataata aaaaatagaa aacatgatct aaatttagaa aaatttagta
     3241 aaaaagttgt ttaggtgcta aaatatgaaa agtttattta gattagtgca gaaaattgag
     3301 ttcaaaaata cgaattattc catagaggct aaagaataaa tgataaaaac accaataatt
     3361 agtgaagatc aatttaaaat agctttaaaa ttaatcaaaa tgggtgaaat tattgtattt
     3421 ccaacagata cggtttacgc tataggggcc aatatttatg atgaatatgc agtgagaatg
     3481 ataaatttag taaaaaaaaa atccattaat gagcccttaa tgctttatgt tgatacaata
     3541 gagaaaataa aagaattatc cagccatgtt cctaaaagtg ctaagatttt aatggaaaag
     3601 tttagtccgg gccctttaac ttatgttctt aaaaaatcaa taaaaatacc taaattcatt
     3661 aataataact tagatacagt ggcaataaga atacccaaaa ataaaaccgc attaaattta
     3721 attagaaaat tgaaaaaccc tcttgtagta tcatcagcaa atttatccaa aaggcctagt
     3781 tcaacaagtt ttagcatggc tttaaaagaa ttaaatgggc ttgtaggagg gataataatg
     3841 ccaaaaaaaa ataaagactc taatattggc atagagtcaa ctattattga atttgactcg
     3901 aaagataatg taataatatt aaggcccggt gcaataacaa aaaaaatgat agaaaaagtg
     3961 ctaggcagta gatataaagt aaattatgca aaggaaacaa aaatagactt aaaaaaaatg
     4021 ttttcttata ggctaagaat acctgtccat acatttaaac gcggggataa cataagaaaa
     4081 tatttaaaaa cgaatacaaa agtacttatc acaagagaca cttttaaatt ttattttttt
     4141 agttttttat gggataaaaa aaatattata ttattcgatt ctttaataga atatgcagaa
     4201 aatctttata aagagctagt aaatgccgaa gaaaaatatg atcaagttat tgttgaaata
     4261 gtagaaaatg aagaactagg gtatgctata aataatagaa ttgtaaaggc tagctcaaat
     4321 aatttcatgt aaattcatta ataaattttt actattctaa taaattgtta tatgtttccc
     4381 atatataatg gaaaacatat tcgagtactt aaaattaaat gccgtcgaaa tttgtgtttt
     4441 aaaagatata aaaaaagtta tttataagtt ctatgagtcg attttagata tagaaaatga
     4501 tgcggagaca ataaatatat tgtctccgcm taaaagtcaa aacattttaa atgaattttt
     4561 ttttaatttg gggccaaaaa agtctaaaga attaatcaac ctttttcgta aaattaaagt
     4621 aaagctgggt gataatgtgt ttgaaaataa ggttttcata ttctatttat gtcttgatga
     4681 tgtagatttt tttaaacttt tgtatgtgct tgataaaagc aattttgatg attatctaat
     4741 attgatttat gaaaaatttc ttgctataag aaaagatttg aaattaatat tgaacaatta
     4801 tggttcgaat aacttgtaat ttaaagtaaa tgtattagcc cctttttggg gctaataaca
     4861 tattctgtat ttgtaattta ggattgttgc aataatatta tctattattg taatatacaa
     4921 gattcacgtt ttgtatgttg cagtaaaggg gcagtttttg tatagattct tgtgtagaaa
     4981 aattttcatt aatttttggt tgctcttcta ctactctaga agagttttcc tcctttttat
     5041 tgaatttatg actttatttt tgcacttatg atataaagaa ctgtcctttg tatatgattt
     5101 agaatacaat atagcattat gccttttaat ttaaagagcg ttatttgttc ctaaaaaaga
     5161 aaagaatttc aagtgcagct agtaaaatag gagccaataa tggctctaca gctttatact
     5221 aaaaaaaa
//
