LOCUS       NC_010401               5644 bp    DNA     circular BCT 05-MAR-2008
DEFINITION  Acinetobacter baumannii plasmid p1ABAYE, complete sequence.
ACCESSION   NC_010401
VERSION     NC_010401.1  GI:169302972
KEYWORDS    .
SOURCE      Acinetobacter baumannii AYE
  ORGANISM  Acinetobacter baumannii AYE
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Moraxellaceae; Acinetobacter.
REFERENCE   1  (bases 1 to 5644)
  AUTHORS   Vallenet,D., Nordmann,P., Barbe,V., Poirel,L., Mangenot,S.,
            Bataille,E., Dossat,C., Gas,S., Kreimeyer,A., Lenoble,P., Oztas,S.,
            Poulain,J., Segurens,B., Robert,C., Abergel,C., Claverie,J.-M.,
            Raoult,D., Medigue,C., Weissenbach,J. and Cruveiller,S.
  TITLE     Comparative Analysis of Acinetobacters: Three Genomes for Three
            Lifestyles
  JOURNAL   PLoS One (2008) In press
REFERENCE   2  (bases 1 to 5644)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAR-2008) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 5644)
  AUTHORS   Genoscope -,C.E.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2008) Genoscope - Centre National de Sequencage :
            BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr
            - Web : www.genoscope.cns.fr)
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CU459137.
            Annotation data relative to BLAST similarities, COG assignations,
            enzymatic function prediction (PRIAM software), TMHMM and SignalP
            predictions, and synteny results (Syntonizer software) are
            available in BaumannoScope database via the MaGe annotation system
            http://www.genoscope.cns.fr/agc/mage/baumannoscope.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5644
                     /organism="Acinetobacter baumannii AYE"
                     /mol_type="genomic DNA"
                     /strain="AYE"
                     /db_xref="taxon:509173"
                     /plasmid="p1ABAYE"
     gene            629..1579
                     /locus_tag="p1ABAYE0001"
                     /db_xref="GeneID:5961972"
     CDS             629..1579
                     /locus_tag="p1ABAYE0001"
                     /function="2.1.1 : DNA replication"
                     /note="Evidence 3 : Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf : putative factor"
                     /codon_start=1
                     /inference="ab initio prediction:AMIGene:2.0"
                     /transl_table=11
                     /product="putative replication protein"
                     /protein_id="YP_001708679.1"
                     /db_xref="GI:169302973"
                     /db_xref="GeneID:5961972"
                     /translation="MNKENSYDKSYPVTTMAIQNKVTECFKSMSVDEKRILIMASPIA
                     RNVDASEQDQILISAQQFADDCGIKVNSAYKQIENASKKLVDRSFSYVNDRGKKVYSN
                     WVIDATYEDAGISLRFTSIVLVMLKILDKYNPYTRYKKDVVLKLKKDYSIDFYHLAKK
                     NQAKNGFELTLDEMFTEFGLPESYRDLRNLKRRVLKSSLDEINEFTDVTVDYSPVKKG
                     RSVVGFKFTVKEKSKPKLIAPERDPKTIDMFCNLSDAQINKYSAILSKLSELSDLSNF
                     QDYPSFALWISGILRDPKSVREETAKRIFKALHSKTDFKP"
     gene            1576..1863
                     /locus_tag="p1ABAYE0002"
                     /db_xref="GeneID:5961967"
     CDS             1576..1863
                     /locus_tag="p1ABAYE0002"
                     /note="Evidence 5 : No homology to any previously reported
                     sequences"
                     /codon_start=1
                     /inference="ab initio prediction:AMIGene:2.0"
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_001708680.1"
                     /db_xref="GI:169302974"
                     /db_xref="GeneID:5961967"
                     /translation="MKTRAELDAMSHQELKDYEQILLALWTPRMAIESDIERLSTNRN
                     ELLEIFNQLKNPDAPENERLKNSILSLKYKIEDLEDKLDDLIQDNRLNRAD"
     gene            complement(2054..2572)
                     /locus_tag="p1ABAYE0003"
                     /db_xref="GeneID:5961966"
     CDS             complement(2054..2572)
                     /locus_tag="p1ABAYE0003"
                     /note="Evidence 4 : Homologs of previously reported genes
                     of unknown function"
                     /codon_start=1
                     /inference="ab initio prediction:AMIGene:2.0"
                     /transl_table=11
                     /product="conserved hypothetical protein; putative signal
                     peptide"
                     /protein_id="YP_001708681.1"
                     /db_xref="GI:169302975"
                     /db_xref="GeneID:5961966"
                     /translation="METFAEPVFSNDLLAKAENGDTSAQLELAEIYLYGHGVDSDENQ
                     AEVWALKSAENGNVAAMFWLADGYVTYARLMEDDDKNDSLEHFQKAFKWFQKASENGH
                     SESMVELADLYTRADSGIEVNINKAFELREKAAKLGNKKAMRSLSVMYRDGIGIPKNT
                     DLAQSWWDKSEN"
     gene            2836..3114
                     /locus_tag="p1ABAYE0004"
                     /db_xref="GeneID:5961969"
     CDS             2836..3114
                     /locus_tag="p1ABAYE0004"
                     /function="2.1.4 : DNA repair"
                     /note="Evidence 3 : Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf : putative factor"
                     /codon_start=1
                     /inference="ab initio prediction:AMIGene:2.0"
                     /transl_table=11
                     /product="putative antitoxin"
                     /protein_id="YP_001708682.1"
                     /db_xref="GI:169302976"
                     /db_xref="GeneID:5961969"
                     /translation="MRDRYMHVFTYTDARNNLKSVLDKVIDDVDVAFITRKEGGHAVV
                     MGQDHYDSLMETLYLLSSPNNASRLNESIAQLRAGKTKHRELIEDDES"
     gene            3095..3364
                     /locus_tag="p1ABAYE0005"
                     /db_xref="GeneID:5961970"
     CDS             3095..3364
                     /locus_tag="p1ABAYE0005"
                     /note="Evidence 3 : Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf : putative factor"
                     /codon_start=1
                     /inference="ab initio prediction:AMIGene:2.0"
                     /transl_table=11
                     /product="putative toxin"
                     /protein_id="YP_001708683.1"
                     /db_xref="GI:169302977"
                     /db_xref="GeneID:5961970"
                     /translation="MRMTNRNVEWTDNAWDEYIYWQTQDKKILKRINTLIKECQRTPF
                     EGTGKPEPLKANLSGFWSRRIDEKHRLVYEVTDERISIIQCRFHY"
     gene            complement(3426..3728)
                     /locus_tag="p1ABAYE0006"
                     /db_xref="GeneID:5961968"
     CDS             complement(3426..3728)
                     /locus_tag="p1ABAYE0006"
                     /function="2.1.2 : DNA restriction/modification"
                     /note="Evidence 3 : Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf : putative factor"
                     /codon_start=1
                     /inference="ab initio prediction:AMIGene:2.0"
                     /transl_table=11
                     /product="putative mobilization protein (MobS-like)"
                     /protein_id="YP_001708684.1"
                     /db_xref="GI:169302978"
                     /db_xref="GeneID:5961968"
                     /translation="MSVETLEQKIAKQEERLRQLKAQKQAIAAREKKKNSDRQRKDDT
                     RRKILLGAWVLNKLKNDESFKGQLTDFEKFLSTESKTEENRQKDKDLFNGVIWNNT"
     gene            3795..5591
                     /locus_tag="p1ABAYE0007"
                     /db_xref="GeneID:5961971"
     CDS             3795..5591
                     /locus_tag="p1ABAYE0007"
                     /function="2.1.2 : DNA restriction/modification"
                     /note="Evidence 3 : Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology; Product type pf : putative factor"
                     /codon_start=1
                     /inference="ab initio prediction:AMIGene:2.0"
                     /transl_table=11
                     /product="putative mobilization protein (MobL-like)"
                     /protein_id="YP_001708685.1"
                     /db_xref="GI:169302979"
                     /db_xref="GeneID:5961971"
                     /translation="MLSWFSRRAHLAIGFHPMVRQGVNPLCNPQTNIFMLVISINRNK
                     EQNKMAIYHFSVKTISRGNGRSAVACAAYRSGEKLVCNFYGKEQDYTKKTGVEFTEIY
                     APENTNTELLNRQTLWNKVEKAERRKDALLAREFEIAFPGELNAEQRKNMLNELCQNL
                     VKKYGVIVDAAIHAPHTDSGSDERNYHAHIMFTTRSINEHGDFSAKKYRDFSRDNGTE
                     TVSLWRESFAELCNHHLKQNGFDERVDHRSYEDQESDLEATQHEGPQATYLRRRGIFT
                     EISLKNDEIKLRNLKIKKVIALDENIKVSEDLVQKVRSELQFQYSQAEYLEKTSQKLS
                     EFQNEELSKLTTKLNTMSSAISELRKKEPLFFKTKWINQINDLIDQHNTQLDIQKHIS
                     GLSEIEKKERYSDHLNKWTEENQLLQPKKSFAKFDEPNITVKQRKLNDQISNIDHQIS
                     EISRRETEYQEYVRDQRLEIINSYIFEEDNYGNKYFSPQNGEKQKRLYAEEMEDLKIQ
                     ELHTAFTKKIETEAQQEFSQKRAIQLENDRKDRESREQQLRKEREQQEQRYAQEREQQ
                     EHLAFLRRQEQEKQQRNEPKKPENDNNHDYTP"
ORIGIN      
        1 acagtaaaac tatagttgat aaaaataaat cgcttaaaac gcaaatgaga gccttttagc
       61 gagtgtctac gagtgacaca acgaaaggtt gcttattccc cctctgaaaa accgtttttt
      121 attgaattac tggggacagt gattagcgag tgtctacgag cgaagtattg atgcttttgc
      181 tcgtcaaaaa gcatgagcat agcgaatgca ttattcatgt tttgcttttt gaatccttga
      241 tcatatatgc aaaaaactgc ccccacgaag cgagtgaaac gagcttcaat agagtacgag
      301 ctttagcgag taccaagggc agttttaata actcactttg gaaataaatt cccttttatt
      361 cttttaaaaa gcttttaaaa gcttttagac cctctgaaaa ccttatgcag caatagtttc
      421 aagcgttaaa agggtacaaa tagcatgata aagggtacaa atagcatgat tttatcgttt
      481 aaaagggtac aaatagcatg attaaagggt acaaatagca tgataaaggg tacaaataaa
      541 ttattgtacc cttatgttta ttggtgtaca ttgttttctc ataagggtac aaaaatcatg
      601 ttcatttttt ataaggtttg atatctgaat gaataaagaa aatagttatg ataaatctta
      661 tccagtaaca acaatggcta ttcaaaacaa agttactgaa tgctttaaaa gcatgtctgt
      721 agatgaaaaa agaattttaa ttatggcttc tccgattgct agaaatgtcg atgcaagtga
      781 acaagatcaa atcttaatat ctgctcaaca atttgctgat gactgtggta tcaaagtcaa
      841 ttctgcttat aaacaaattg aaaatgcgtc aaaaaaacta gtagatcggt ccttttcata
      901 cgttaatgat agggggaaaa aggtctactc taactgggta attgatgcta cttatgaaga
      961 tgcagggata tctttaaggt ttacatctat tgttttggtg atgttgaaaa ttttagataa
     1021 atacaatcca tacactcgtt ataaaaaaga tgtagttcta aaattaaaaa aagactactc
     1081 aatagacttt taccatttag cgaaaaaaaa tcaggcaaaa aatggctttg aattaacgct
     1141 agatgaaatg tttacagagt ttggtttacc agaatcttat agagatttga ggaacttaaa
     1201 acgaagagtt ttgaagagct cattagatga aattaatgaa tttaccgatg taacagttga
     1261 ctatagtcca gttaaaaaag gacgttctgt tgtcggcttt aagttcactg tgaaagaaaa
     1321 atctaagcca aaattaatag ctcctgagcg agatccaaaa acaatagata tgttctgcaa
     1381 cctgtctgat gctcaaatta acaagtacag tgctatttta tctaaacttt ctgagctatc
     1441 agacctaagt aacttccagg actatcctag ttttgccctt tggattagtg gcatcttacg
     1501 agatccgaaa agtgtaagag aggaaacagc aaagcggatt tttaaagctc ttcatagcaa
     1561 gacggatttt aaaccatgaa aactagagct gaattagatg caatgagcca tcaagagctc
     1621 aaagactatg agcaaatttt acttgctctg tggacaccaa gaatggctat tgaaagtgac
     1681 attgaaaggt taagcactaa tcgcaacgaa ttattagaaa tttttaatca attaaaaaat
     1741 cctgatgctc ctgaaaatga gcgtttaaaa aattctattt tatcgctcaa atataagatt
     1801 gaagatttag aagataaatt ggatgatctt attcaagata atcgcttaaa tcgtgcagat
     1861 tgaattattc agtttattta attaaaaccg tgaaacattg atcaaagaat aggcgtggaa
     1921 cgtgaaaaat cataaaaaaa gcccaccaga gggtatgtgg gctaaaatca tgtaactaca
     1981 gcattgattt ctatagataa ttataacgca tttcgtataa ggtgtattat gttaatttta
     2041 ggaaatatta aaactaattt tcagacttat cccaccaact ttgagctaaa tcagtatttt
     2101 taggaatacc tataccatca cgatacataa cggaaagact tcgcattgct ttcttattac
     2161 ctaactttgc agccttttca cgaagttcaa aagctttatt aatattaact tctattccgc
     2221 tatctgcacg agtatataga tcagctaact caaccattga ttcagaatgg ccattttctg
     2281 aggctttctg aaaccactta aaagcttttt ggaaatgttc taaagaatcg tttttgtcat
     2341 catcttccat taatctagca taagtaacat atccatcagc taaccaaaac attgctgcta
     2401 catttccatt ttctgctgat ttaagagccc aaacttcagc ttgattttca tctgaatcaa
     2461 caccatgacc atatagataa atctcggcta attctaactg agcagaagta tctccatttt
     2521 ctgctttcgc taataaatca ttagaaaaaa caggttctgc aaatgtttcc attgaaaggc
     2581 aaactcctaa agccataaaa atatttgtta atttattcaa tttttaacct ttaaactaaa
     2641 ctgttaggct tgtatatttt tatatcatac ctaaaagaaa actctaaaat tagagtatgt
     2701 cttatctcta tttaacataa tggcggttat acgaaattga caatatgtac aggattctgt
     2761 acatttagga ttgtaaagtt tcaatcacta ccgcctaggt agtctagcta gcagcgtttt
     2821 gacgcagctt accctatgag ggatagatat atgcatgtat ttacatatac ggacgcacgt
     2881 aacaatttaa aatctgtttt agataaagta attgatgatg tagacgttgc ttttattaca
     2941 agaaaagaag gtggccatgc tgtagtaatg ggacaagatc attacgatag cttaatggaa
     3001 acgttatatc tcctttcatc tccaaataat gcaagtcgtt taaatgaatc aattgctcaa
     3061 ttacgtgcag ggaaaacaaa acacagagag ttgattgagg atgacgaatc gtaacgtcga
     3121 atggactgat aatgcctggg atgaatatat ctattggcag acacaggata aaaagatact
     3181 taagcgtatt aataccttaa tcaaagaatg tcagcgaaca ccttttgaag gaacaggaaa
     3241 accagaacct ttaaaagcta atctttcagg attttggagt cgtaggattg atgaaaagca
     3301 tagattagtt tatgaagtga cagatgaacg aatctctata attcaatgtc gattccatta
     3361 ctaacaagat cccctatttt taggggattg tttttttatt taatacaaaa tctcatatgc
     3421 gaaatttagg tgttattcca tataacgcca ttaaaaagat ctttatcttt ctgcctattt
     3481 tcttcagtct tactttccgt gcttaaaaac ttttcaaaat cggttagttg acccttaaaa
     3541 gattcatcat ttttcagttt gtttagaacc caagccccca gtagaatttt acgtctagta
     3601 tcatcttttc tttgtcgatc agaatttttc tttttttcac gagcagcaat agcttgtttt
     3661 tgtgctttta gttgtcttaa tcgttcttct tgctttgcaa ttttttgctc taaagtttca
     3721 acactcatac catcaccatc tcaaggaatc cccctcaagc ataggtctgt ttgaattgaa
     3781 attcaagaca gcccatgcta tcgtggtttt cccgaagggc gcacttagcc attggatttc
     3841 atccaatggt gcgacaaggg gtaaatcccc tttgtaatcc ccagaccaac atattcatgt
     3901 tggtaatttc gataaatcga aataaagagc aaaacaaaat ggcgatatat catttttcag
     3961 ttaaaacgat tagtagaggt aatggacgat cagccgttgc ttgtgctgca tatcgttcag
     4021 gtgaaaaatt ggtatgcaat ttctatggaa aagaacaaga ctacacaaaa aaaactggtg
     4081 tcgaatttac agaaatctat gcgcccgaaa atacaaatac cgagttactc aatcgtcaga
     4141 cactttggaa caaagtcgaa aaagccgaac gaagaaaaga tgcattactt gcaagagaat
     4201 ttgaaattgc atttccaggt gaattaaacg ctgaacagcg taaaaatatg ctcaatgaac
     4261 tttgccaaaa cctcgttaaa aaatatggtg tcatcgttga cgctgctatt catgcaccgc
     4321 atacagacag tggaagtgat gaacgcaact accatgcaca catcatgttc accacccgaa
     4381 gtattaatga gcatggtgac ttttcagcaa aaaaatatag ggacttcagt cgtgacaatg
     4441 gcacagaaac tgtaagcctc tggagagaat catttgcaga attatgcaat caccacctga
     4501 aacaaaatgg atttgatgaa cgtgtcgatc acagaagtta tgaagaccag gaaagtgacc
     4561 tagaagcaac tcagcacgaa ggtcctcaag cgacatacct ccggagacga ggaatattta
     4621 cagaaattag tctgaaaaat gatgaaatta agctacgtaa tttaaaaatc aaaaaggtca
     4681 tcgcactgga tgaaaacatc aaagtatctg aggatcttgt tcaaaaagta cgaagtgagc
     4741 ttcagtttca atactctcaa gctgagtatt tagaaaaaac ttctcagaaa ctttctgaat
     4801 tccaaaatga agaattatca aaattaacaa caaaattaaa cacgatgagt tctgcaatat
     4861 cagaactacg caaaaaagag cctttatttt ttaaaacaaa atggatcaat caaataaatg
     4921 acctgatcga ccaacacaac acccaactag acatccaaaa gcatatttct ggtcttagtg
     4981 aaatagaaaa aaaagagaga tattctgatc atttaaataa atggacagaa gaaaatcagc
     5041 tgctccagcc taaaaagtct tttgcaaaat ttgacgaacc gaacatcact gttaaacaac
     5101 gaaaacttaa tgatcaaatt tcaaatatag atcatcaaat ttctgaaata tcacgcagag
     5161 aaactgagta tcaagagtat gtacgcgatc aaagactgga gatcataaat agttatatat
     5221 ttgaagaaga taactatgga aataaatact ttagtcctca aaatggtgaa aaacaaaagc
     5281 gactatatgc agaagaaatg gaagatctaa aaatccaaga attgcatacg gcttttacaa
     5341 aaaaaattga gaccgaagcg cagcaagagt tttcccaaaa aagagcaata cagctcgaaa
     5401 acgaccgaaa agatcgtgaa tctagagaac agcagttacg taaagaacga gagcaacaag
     5461 aacaacgcta tgcacaagaa cgagagcaac aagaacattt ggcattttta agacgccaag
     5521 aacaagaaaa acagcagaga aatgagccta aaaagccaga aaatgacaat aaccatgact
     5581 acacgcctta gcaatcccat ttaagcgcaa aaaaacgggg gttttagcga cttttgatag
     5641 aaat
//
