LOCUS       NC_010487               3565 bp    DNA     circular BCT 21-MAR-2008
DEFINITION  Escherichia coli SECEC SMS-3-5 plasmid pSMS35_3, complete sequence.
ACCESSION   NC_010487
VERSION     NC_010487.1  GI:170650756
KEYWORDS    .
SOURCE      Escherichia coli SECEC SMS-3-5
  ORGANISM  Escherichia coli SECEC SMS-3-5
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3565)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2008) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   2  (bases 1 to 3565)
  AUTHORS   Fricke,W.F., Wright,M.S., Lindell,A.H., Harkins,D.M.,
            Baker-Austin,C., Ravel,J. and Stepanauskas,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2008) J. Craig Venter Institute, 9712 Medical
            Center Dr, Rockville, MD 20850, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CP000974.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3565
                     /organism="Escherichia coli SECEC SMS-3-5"
                     /mol_type="genomic DNA"
                     /strain="SECEC SMS-3-5"
                     /db_xref="taxon:439855"
                     /plasmid="pSMS35_3"
     gene            49..711
                     /locus_tag="EcSMS35_D0001"
                     /db_xref="GeneID:6106618"
     CDS             49..711
                     /locus_tag="EcSMS35_D0001"
                     /note="identified by Glimmer3; putative"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_001739887.1"
                     /db_xref="GI:170650758"
                     /db_xref="GeneID:6106618"
                     /translation="MENNSPDIDIIELFLFLKKKIVSIILFVVLSLILSSIFLLINKN
                     KINIKYELNMIANSPSMIINCGSDFYCKANIIQSIINNKSKSITSNIDERGKKIILSW
                     AGDDRYKPLVTAEVNAIHKAIDDWYIQDYKTYKSIVNNQDSNYINGTETYAKVALLTK
                     INTAGEKNFISINDEIVNKKYKPALIMALTLIIAVIFSFSYHIIKRSILEYKNKLNRS
                     FY"
     gene            1078..1473
                     /locus_tag="EcSMS35_D0002"
                     /note="IS1 transposase orfB, degenerate; this region
                     contains one or more premature stops and/or frameshifts
                     which are not the result of sequencing error"
                     /pseudo
                     /db_xref="GeneID:6106620"
     gene            complement(1627..2223)
                     /locus_tag="EcSMS35_D0003"
                     /db_xref="GeneID:6106619"
     CDS             complement(1627..2223)
                     /locus_tag="EcSMS35_D0003"
                     /note="identified by Glimmer3; putative"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_001739888.1"
                     /db_xref="GI:170650759"
                     /db_xref="GeneID:6106619"
                     /translation="MAGDLRRLRGDRDKKSVPHCIVHACMNGLFFLTTELHCSFSSYI
                     TFTTLLHHFCIIPSAYTSLLQHFCITFTSLLHHSFSSYVTFTSVPSSVPFVHPPPFLN
                     VLKTVFPAVPATPHGHAINCVPVHRFRIKRTSETGLTPAEWREFPRYALACILMHAVK
                     TEPARFWRVFGWFVACFTGFPSETPSAPLRRCGQRMLW"
     gene            complement(2633..2842)
                     /locus_tag="EcSMS35_D0004"
                     /db_xref="GeneID:6106621"
     CDS             complement(2633..2842)
                     /locus_tag="EcSMS35_D0004"
                     /note="identified by Glimmer3; putative"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_001739889.1"
                     /db_xref="GI:170650757"
                     /db_xref="GeneID:6106621"
                     /translation="MSVRFRDACQGGGAYGKTPRRGVAFSLLSLAFVMLTVTLSAYLP
                     SARRRLMTERSERMSEEAENHQNVQ"
ORIGIN      
        1 atttatttat ttaagctata atttaataac tattgttggt atataaaaat ggaaaacaat
       61 tcacctgata ttgatatcat cgagttattt ctttttctta agaaaaaaat cgtgagtatt
      121 attttgtttg ttgttttatc attgatttta tcatctattt tcttgctgat aaacaaaaac
      181 aaaataaata taaagtacga attaaacatg atcgctaatt cgccaagcat gattattaac
      241 tgtgggtctg acttttattg taaagcgaat atcatacaat caatcataaa caataaaagc
      301 aagtctataa catcaaatat agatgaaaga ggaaaaaaaa taatcctgtc atgggctggt
      361 gatgaccgtt acaaacccct ggttaccgct gaagtaaacg ctatccataa agctattgat
      421 gactggtaca tccaagatta taaaacttat aaaagcatag ttaacaacca ggacagcaac
      481 tatataaatg gcactgaaac atatgcaaaa gttgcattat taacaaaaat aaacactgcc
      541 ggagaaaaaa acttcatttc aataaatgat gaaatagtga ataaaaagta taaaccagct
      601 ttaattatgg ctctaacgtt aattatagcc gttatctttt ccttctcgta tcatataata
      661 aaaagatcta tacttgaata taaaaataag ttaaacaggt ctttttatta gcctgtaacg
      721 attaataacc ttattctagc aacatccgtt acacgccaga tgcagaaaag cccgctaata
      781 gcgggcctcc cgataaacct caagtgaata agggcagtca gttctatttc ttacccttcc
      841 attgcctaac tgattctccg tggcactggg ccaactgcag cagtttttat tcccatgagg
      901 aatccgattg gtcacctcgc gatctccatt ttttaagata cacacataat ttcattagac
      961 catctacagc tgactgatgc cataactcac ctttagcatg aagattctag gtgatgactc
     1021 taattagttg aatctaatgt ataatacagg ctttcttcgc ctgttgccca tgctgatatg
     1081 gcgcttatct gcgagcttga tgagcaatgg agctacattg gcagtaaagc ccggcaacac
     1141 tggctctggt acgcgtacaa caccaaaaca ggcggtgtat tggcctacac gtttggttcc
     1201 cgaaccgatt aaacgtgtcg gaagctactg gcactgctta cacccttcaa catcggcatg
     1261 ctcaccagcg atgacttggg cagctatggc cgggtggtgc cgaagaataa gcatctgacc
     1321 ggcaaaatat tcacccaacg cattgagcgt aataatctga cgctacgcac ccgcattaag
     1381 cggttggctc gtaaaacaat ctgcttctca cgctcagttg agatccacga aaaagtgatc
     1441 ggagcggtta tcgaaaaaca catgttctac taattggatg cactatcaga ttctgaaccg
     1501 tgggtatata agtctgcatt tcagcttcat caatcccgtt ttttttgctg aatccattta
     1561 ccaatatcct gtccatacgt tactaaagaa aataatatat gcggagtgag tcatcatgcg
     1621 cctaatttac cataacatcc gttgcccgca ccgcctgaga ggcgctgagg gcgtttctga
     1681 cgggaaaccg gtaaaacagg caacaaacca cccgaaaacc cgccagaaac gcgcaggctc
     1741 tgtttttacg gcatgcatga gtatgcacgc aagtgcatag cgcggaaatt cacgccattc
     1801 agccggggta agtcctgttt ccgatgttct ttttatccga aaacggtgaa cggggacgca
     1861 atttattgcg tggccgtgag gcgttgccgg cacagccgga aaaaccgttt tcagcacgtt
     1921 caggaagggg ggcggatgta caaatggcac agaggatgga actgacgtaa aagtgacgta
     1981 tgagctgaag gaatgatgta aaagtgatgt aaaagtgatg caaaagtgtt gtaaaagtga
     2041 tgtataggct gaaggaatga tgcaaaagtg atgtaaaagt gttgtaaaag tgatgtatga
     2101 actgaaggag caatgtaatt ctgtagtcag gaagaataac ccgttcatgc aggcatgaac
     2161 gatacagtga ggaacgcttt ttttgtcacg atctcccctt aacctgcgta aatcacccgc
     2221 catggttgat tatttttcaa cctcaaaatg gtcatacacc taacgcagct gcgattgtca
     2281 tcgcaacttc atgaaaaata aataaaaaag aaaaaataaa gggattctgg gtattaccgg
     2341 ggtaataata ttaagcgcca ggacaatgaa aattaaggcg atgccggtat tactccggta
     2401 atacccagaa cggagccatt acgcaccgtc ctgctgctca ttcaggcgcg ctgacaggct
     2461 tcggtaaagg cgttccgcat cctcatggag tttctcgcag aaatcagcct catgatccag
     2521 atccagctca ttaagcctgt ccagaagaag cagggactga tcctggataa atttagccat
     2581 gttaacggct gtcttttgtt gtttgttcat gaaggccccg gcgcgaaagt gcttactgta
     2641 cgttctgatg gttttccgct tcctcgctca ttcgctcact ccgttcggtc atgagtctgc
     2701 ggcgagcgga gggaagataa gcagataacg taacggtaag cataacgaaa gctaaggaca
     2761 agagcgaaaa ggccacgccc cgccggggcg tttttccata ggctccgccc ccctgacaag
     2821 catcacgaaa tctgacgctc aaatcagtgg tggcgaaacc cgacaggact ataaagatac
     2881 caggcgtttc cccctgatgg ctccctcgtg cgctctcctg ttcctgcctt tcggtttacc
     2941 ggtgtcactc cgctgttatg gccgcgttta tctcattcca cgcctgacac tcagttccgg
     3001 gtaggcagtt cgctccaagc tggactgtat gcacgaaccc cccgttcagt ccgactgctg
     3061 cgccttatcc ggtaactatc gtcttgagtc caacccggaa agacacgaca aaacgccact
     3121 ggcagcagcc attggtatct ggtttacgga gcggagaggc gtgtacaagc atacacagag
     3181 ttcttgaagt gttgacctga ctacggctac actggaagga cagatttggt cactgcgctc
     3241 cgtttaagcc agttaccacg gttcagaaac ttgccggttt cctgaacctt cgaaaaacca
     3301 ccttgccggg tggttttttc gttttcagac caagagatta cggctgtaac acaaggatct
     3361 caagaagatc ttaaaatatg tggaaaggat acaggctgat aacaactctc tccatagaca
     3421 tgaccgaaca aaaaacaaac aaaagaaatt gattttagga gttttctcac acctaaataa
     3481 taggtaaaat gttttttatt tgattggatt ttaaaatgaa atatactaaa tcggcgaaaa
     3541 tattcatcac ggctatttta atttt
//
