LOCUS NC_007720 4316 bp DNA circular BCT 18-MAY-2006 DEFINITION Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-IV, complete sequence. ACCESSION NC_007720 VERSION NC_007720.1 GI:85057971 KEYWORDS . SOURCE Aster yellows witches'-broom phytoplasma AYWB ORGANISM Aster yellows witches'-broom phytoplasma AYWB Bacteria; Firmicutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasma asteris. REFERENCE 1 (bases 1 to 4316) AUTHORS Bai,X., Zhang,J., Ewing,A., Miller,S.A., Jancso Radek,A., Shevchenko,D.V., Tsukerman,K., Walunas,T., Lapidus,A., Campbell,J.W. and Hogenhout,S.A. TITLE Living with genome instability: the adaptation of phytoplasmas to diverse environments of their insect and plant hosts JOURNAL J. Bacteriol. 188 (10), 3682-3696 (2006) PUBMED 16672622 REFERENCE 2 (bases 1 to 4316) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (18-JAN-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4316) AUTHORS Bai,X. and Hogenhout,S.A. TITLE Direct Submission JOURNAL Submitted (06-APR-2005) Department of Entomology, The Ohio State University - OARDC, 1680 Madison Avenue, Wooster, OH 44691, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000065. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..4316 /organism="Aster yellows witches'-broom phytoplasma AYWB" /mol_type="genomic DNA" /specific_host="Lactuca sativa" /db_xref="taxon:322098" /plasmid="pAYWB-IV" misc_feature 1..4316 /note="Sequencing Center: Integrated Genomics, Inc., 2201 W. Campbell Park Dr., Chicago IL 60612" gene 1..1128 /gene="rep" /locus_tag="AYWB_pIV01" /note="pAYWBIV01" /db_xref="GeneID:3866203" CDS 1..1128 /gene="rep" /locus_tag="AYWB_pIV01" /codon_start=1 /transl_table=11 /product="replication protein" /protein_id="YP_456884.1" /db_xref="GI:85057972" /db_xref="GeneID:3866203" /translation="MKLKICELVINSDKINKTKIENILELKKKAIQNYAYILHDKDIY QNEKEATLNGKNIGDLKKPHWHIYLRFNYAHDTKHISQWFNTQDNFVSKIKGRFSDAL MYMIHANRSDKHQYDEKAVVSKFDWKSEAQQDIFLREYKIDSRLEEILSKIQSGEIKE CNSTNHISIIENNIYSSAIEEAVKYRNNTLKGMDRQMECVFITGLSGCGKTTLAKKIA KNKKYQTYISSGSNDVLDDYSRGEECIILDDLRSNCLGLSDLLKMLDNNTSSSVKSRY KNKVLECKLIIITTVKSIDDFFEDIFKKDESIIQLKRRCKLHIKIDSKYIYSSIWNPL EMKYDLIDKKPNNLLNEFQLKTLSKKEAKEFIKQITNTDDI" gene 1420..1890 /locus_tag="AYWB_pIV02" /note="pAYWBIV02" /db_xref="GeneID:3866204" CDS 1420..1890 /locus_tag="AYWB_pIV02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456885.1" /db_xref="GI:85057973" /db_xref="GeneID:3866204" /translation="MQNLNLNIDAFIDKINYYVTYIITFLKYVFNSIIAIKNVDFSLF NIPNSIGIICHFLFAIFCILIFITLLVFLGSIWNIIKTIIKWILYPFKLLFKLIKWIF SPKSELKQPIKTNNLNQYDLNKLQRKINDLEYKLNLQKRQNVIKPFENKYQKRG" gene 1894..2376 /locus_tag="AYWB_pIV03" /note="pAYWBIV03" /db_xref="GeneID:3866205" CDS 1894..2376 /locus_tag="AYWB_pIV03" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456886.1" /db_xref="GI:85057974" /db_xref="GeneID:3866205" /translation="MKNNNHKNPKNKIFIIWGLFISGVILVLLMLLLLAINKPQPKTD TQNQQHLQSNINAEQEQQTYNRVINKIESEIDKLTQQQEQTPLLKYPPKIRYYDDGIK IFSIEKYNQDTGKLIKDIYYKNDGETIEYTVDYNSDGSILNTFYNPDGTVRDTYHSNE " gene 2369..2929 /locus_tag="AYWB_pIV04" /note="pAYWBIV04" /db_xref="GeneID:3866206" CDS 2369..2929 /locus_tag="AYWB_pIV04" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456887.1" /db_xref="GI:85057975" /db_xref="GeneID:3866206" /translation="MNKKRKIILKIWIIFISILILIMLFLLGLRLPKLLKSKQQKTEN QVQNQSQYQIQYIHDTNKVQNIVRLLTELKTLKQLKNKQLQKQVEKQKETQPINNLDF FDPKFQNELYHKLSKSMDEQMSQFSQKDFVSSEIPFEQLNDNNKLVKDIAVVSLTIGA GVISCVVLAPIFASVGPIAAPVALLL" gene 2951..3265 /gene="ssb" /locus_tag="AYWB_pIV05" /note="pAYWBIV05" /db_xref="GeneID:3866207" CDS 2951..3265 /gene="ssb" /locus_tag="AYWB_pIV05" /codon_start=1 /transl_table=11 /product="single-stranded DNA binding protein" /protein_id="YP_456888.1" /db_xref="GI:85057976" /db_xref="GeneID:3866207" /translation="MLNKVQLIGNITHDLEPTHINTNEGQISKLDFQIAVNNKDKTQF IPCVVFRNQAENMSMYLHKGSKVYLEGTLSIEKYTNNEGENKTATKVIVQKVIFLDNK DK" gene 3316..3651 /locus_tag="AYWB_pIV06" /note="pAYWBIV06" /db_xref="GeneID:3866208" CDS 3316..3651 /locus_tag="AYWB_pIV06" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456889.1" /db_xref="GI:85057977" /db_xref="GeneID:3866208" /translation="MKKSEINKNTINFFKEMKSKGFKPEDFQRNYYFFEIKDFKAAGF TNDEISFFDYTINELKQKGFTNKQIDELSYYDEYYFGVDENEQNKIIDKLKNNGFTNE LLKSIKLIV" ORIGIN 1 atgaaattaa agatttgtga acttgttatt aattctgata aaattaataa aactaaaata 61 gaaaatattt tagaacttaa aaaaaaagcc attcaaaatt atgcctatat tttacatgat 121 aaagatattt atcaaaatga aaaagaggct acattgaatg gtaaaaatat aggggatcta 181 aaaaaacctc attggcatat atatttaaga tttaattatg cacatgatac aaaacatatt 241 tctcaatggt ttaatacaca ggataatttt gtttccaaaa taaaaggtag atttagtgat 301 gctttaatgt atatgattca tgctaatcgt tctgataaac atcaatatga cgaaaaagca 361 gtggttagta agttcgactg gaaatcggaa gcacaacaag atattttcct gcgtgaatat 421 aaaatagact cccgtttaga agagatttta tctaaaatac aatcaggaga aataaaagag 481 tgcaacagca ctaaccacat ttctattata gagaataata tttattcttc agcaatagaa 541 gaagcagtta agtatagaaa caatactttg aaaggaatgg atagacaaat ggaatgtgtt 601 tttattacag gtttaagtgg ttgtggtaaa actacgttag ctaaaaaaat agctaaaaat 661 aaaaaatatc aaacttatat ttcatcaggt agtaatgatg ttttagatga ttatagtaga 721 ggcgaagaat gtattatttt agatgaccta cgttctaatt gtctaggttt atcagactta 781 ttaaaaatgt tagataataa tacttcatct tcagttaaga gtcgttataa aaataaagtt 841 ttagaatgta aattaattat tattacaaca gttaaaagta ttgatgattt ttttgaagat 901 attttcaaaa aagatgaaag cattattcaa ttaaaacgtc gttgtaaatt acatattaaa 961 atagattcta aatatattta ttctagtatt tggaatccat tggaaatgaa atatgattta 1021 atagataaaa aacctaataa tttattaaat gaatttcaat taaaaacttt gtcaaaaaaa 1081 gaagcaaaag agtttattaa acaaataact aatacagatg atatttaaat tatttctata 1141 cttaaatgtt tttttttgat tgtttttatg tgtattttac taggtttttt gatataatat 1201 aagtgtattc acagcaacaa taattaataa ttaataattt ataacatttt tatatgttaa 1261 aataattatg accttatata tatgttcgtt gctgtgcgta tatgtagggt catttttgtt 1321 ttgtaaagct cacattaaaa tataaaaaaa atagttatat aaatcaaccc tcttcgcaaa 1381 agaaacgatt tatataacta tcatgaaagg atgcattaaa tgcaaaacct taatttaaac 1441 atagacgcat ttattgataa aataaattac tatgttactt atattataac atttttaaaa 1501 tatgttttta acagtattat tgcaatcaaa aacgttgatt tcagtttatt caatatacca 1561 aatagtatag gaataatttg tcattttctt tttgctattt tttgcatttt aatctttatc 1621 accttgttag tttttttagg ttctatatgg aatattatta aaacaataat caaatggatt 1681 ttatatccgt ttaaattatt atttaaatta attaaatgga ttttctcacc taaatcagaa 1741 ttaaaacaac caattaaaac taataacttg aatcaatatg atttaaacaa attacaaaga 1801 aagataaatg atttagaata caaacttaat ttacaaaaaa gacaaaatgt aattaaacca 1861 tttgaaaaca aatatcaaaa aagaggttaa attatgaaaa acaataatca caaaaaccca 1921 aaaaataaaa tatttatcat ttggggttta tttattagtg gagttattct tgttctttta 1981 atgcttcttt tattagctat taataaacct caacctaaaa ctgataccca aaatcaacaa 2041 catttacaat ctaatattaa tgccgaacaa gaacaacaaa cctataatag ggttattaat 2101 aagatagaat ctgaaataga taaattaacc caacaacaag aacaaactcc attacttaaa 2161 tatcctccta aaataagata ttatgatgat ggaataaaga tcttttccat agaaaaatat 2221 aatcaagata caggtaaatt aattaaagac atttattata aaaatgatgg agaaacaata 2281 gaatatactg ttgattacaa ttctgatggt tctatcttaa acacttttta taacccagac 2341 ggaactgtta gagacactta tcattctaat gaataaaaaa agaaaaatta tattaaagat 2401 ttggattata tttatatcaa ttcttatttt aatcatgtta tttcttttag gtttaagatt 2461 acctaaatta cttaaatcaa aacaacaaaa aactgaaaat caagttcaaa accaatctca 2521 atatcaaatc caatatattc atgatactaa taaggttcaa aatattgtta gattattaac 2581 tgaattaaaa acattaaaac aattaaaaaa caaacaatta caaaaacaag ttgaaaaaca 2641 aaaagaaact caaccaataa ataatttaga tttctttgac cctaagtttc aaaatgaact 2701 ttatcataaa cttagtaaaa gtatggatga gcaaatgagt caattttctc aaaaagattt 2761 tgtttcatct gaaattccat ttgaacaatt aaatgacaat aataaattag ttaaagatat 2821 cgcagttgta agtttaacta ttggtgcagg agttattagc tgtgtagttc tagctcctat 2881 ttttgcatct gtaggtccaa ttgcagctcc tgttgcttta ttactttaat attaagaaag 2941 gagaaataaa atgttaaata aagttcaatt aataggtaat ataactcatg acttagagcc 3001 aacacatatt aatactaatg agggtcaaat atctaaatta gatttccaaa tagctgtaaa 3061 taataaagat aaaactcaat tcattccatg tgttgttttt agaaaccaag ctgaaaacat 3121 gagtatgtat ttacataaag gttcaaaagt atatttagaa ggaacgttat caattgaaaa 3181 atataccaat aacgaaggcg aaaataaaac tgctactaaa gtaatagttc aaaaagttat 3241 ttttttagat aataaagata aataaaacaa aggcccctat taatttaggg gctttagata 3301 gaaagtatta tatcaatgaa aaaaagtgaa atcaataaaa atacaattaa tttttttaaa 3361 gagatgaaat ctaaaggatt taaacctgaa gattttcaaa gaaattatta tttttttgaa 3421 attaaagatt ttaaagctgc tggatttaca aatgacgaaa tatcattttt tgattataca 3481 attaatgaat taaaacaaaa gggatttaca aataaacaaa ttgatgaatt aagttattat 3541 gatgaatatt attttggggt agatgaaaac gaacaaaaca aaataataga taaattaaaa 3601 aataatggat ttacaaatga attattaaaa tctattaaac ttatagttta atatagtaaa 3661 aaaataaata aaacaaaggc ccctattaaa ttaggggctt taaaaatata aaaatcgtct 3721 cccgcggaat gttaatttta atcaatctat taattttata ataaccttta aacacattat 3781 tttatatcta tatgacgttt caaatgacat ttaatatctt ttatctaacg cacataaata 3841 aaggtctaag atatctcgct tagcgagcta ggcgtccagc cgatgcatct taattatatt 3901 atgatacccc ctcctataaa gtcccctttt ggggatttag gggttttttt aaattaaaaa 3961 ttcgctaggt ttttcctagg ttttgttagt tttagtaaca tccctgagaa tatagataga 4021 aagatatata aaatcctcag tatttcccta ccatagaggg cttgtctcta tggtagggag 4081 aatggtagaa cgaattatat tgatttatta gtgttttcct aatgattttc aatttgcatt 4141 ttctaccatt tttaacttgt taaagtagaa catatatgtt ataattaaat tgagcgcctt 4201 tgctgcgtta ggcagtaaag gagtagcgaa aataaaaaaa ccagcgcctt gcccgtgaac 4261 tatcgggtaa ggagtagctg gtatccgtta aaaaatatta aaaaggataa attaaa //