##maf version=1 a score=3156 s hg17.chr15_random 18395 333 + 784346 AAATACAGTGGAAAAGACAGAAGAGAG-TCCCAATTCATTGGTTATTGATTATAGCTCTGCTGATTTTGTGCCATCCCATCTTGGTCATTTTTACGGGTTCTAACATATTCCATCTGTTGAGCACCTATCTCTCTGTGTCTTTGAACTGA-CACTGAACACGTGGACTCTAATTAGTTCTTTTACAGTTTCCTGGAGTATGC-TCTTAACTGTTTATTTGAAATCTCATGGCCTCTTGACAGCTCTTTGCTATCTACGTTGTTACACATAATTCAAAGATAGAGAAAACACAGT-GAACATTTAGATCAACTAACTCACACTACAAAAGAGGAAATA s mm7.chr14 109872938 300 + 119226840 AAATGTAGTAGGACAGATAAGAAAGGGATGCCACTTTATTGGGCATTT-CTGTGGCCTGGCTGACTTACTGCTTTTTGTGTTTTGCTGATCTTCTGGATTGTGGTTTGTCACATCTATTGAGAATCCAGTGCTTTG-ACTGCAGAGCTGAACTCTGATCACATTGGTCCTGTTCAATTATTTT-CAACTGCCTATGATCTATACCCTATCTGGCCACATGAAATGCCATG------TGA--GGTCTTCACCA---------------------CAAAAACAGT-----CACATTAGTAAGTTTAAATCATCTAGTTAGCTCTATACGAGACCAAATA a score=2530 s hg17.chr15_random 18728 349 + 784346 CAACATATTACTTCTTATCTACTCCTGCCCATGTGACTTTGCAATGTAATAATGATGCTTTGAAACCTCACTGATTTCTACAGAGTCTCCAGACCTAAATTCTCCAAAGTGATACCTTCAAACTACTGCTTAGGACATGGCCTGTCCCTGGAGGAGAGTGAGGTGCCCCCCCAGTCCCCACCACTCACATAGAAATGTTTATGGGAATAGGACTAAGCTAAAAATTTCATGAGGCAATAAACTATTTCTGAGCCATGCTAGCATTGTTTCACATCTCTGTATTCCAAGAGTTAGCTTTGCAGCTGTTGCCTAACACAGAGAAAGCCCTCAG--TATCTTTGTGTTAGAGGA s mm7.chr14 109873422 250 + 119226840 TAACACGTTATTTTCAATCCATCCTAGTGCATGAGTCTTGGCATTTTAGTAATAACTCTTAGATCCATTTTTAGTGTTTTTA---TTTTCAATTGGATATC-----AAGTGGTACCTTCAGATTTAAGCTTG---CAAAGCATGATATTG-ATGAGCCTGAGATGGCCCT---ATCCCCACA-------------------------------------------------------------------------------------TTCCCACTTTTGTTTTCTG-GAATCATCTTTCTAGCTCTTACCTAACACAGAGAAGAGACTCAGCATGTCTTTCTGTTAGAGAA a score=2327 s hg17.chr15_random 19085 53 + 784346 AAATATAGATAAATAAATTGAAAGCAATGGCTAGAGTAAATTATATAATCAGA s mm7.chr14 109874811 53 + 119226840 AAATGAAGATAAATTATGTGAAAACAATGCTCATCATAAATGATATAATTAAa a score=14404 s hg17.chr15_random 19138 542 + 784346 GCCAATTGTCAATAATACAAACTGTATAGCTTGAAGGACATGGTCTAAAATTTATTTTTTAAGGTAGAAA----AAACATTATCTTCTTTACTATATTTCCAAAAAGCATGATTAAGCCCTCATCAATTTCTGTACCTGTGAATGTGCTTTGGCGTTATACTTACACAGCATCAGATACTTTATACTCTGGATAATTAGCGGACAGTTTTGCAGCTTTGATTTGATATTATACCATCAGTATTCAA--GTTACTTTAACCACTACCGAAATATTTTAAATCCACTGCCATTTAATCATAGTAATTATCCTGTCTGCAGAAGTTTCCAGTGACAGAGAACTACCCTGTGTTTGACAACCAATGATGAATATTTTTTTTTTTGACACTAAGTTTGGCTAACAAGTAAATGAGGATTCTTC-ACA-TTTCTTTGCTTTGCCTTGCCAAGTGTAAAAACTGTAAG--TCCT-----CTAGCTGACATTTGACTTGGTGAAACTATAATTGTCTCATTGGTTGTGGCTCTGTTAGAGaaaaaaaaattattatatatatata s mm7.chr14 109875041 513 + 119226840 GCTAGTTATGAACAACACAAATGGCAGGACTTAAGGGACAAGGTTAAATATTTAGTTTCTTTAGTTGAGAGTGAAATGGTTATTGTCTTTTCTGTATGTCTAAG------------------------TTTTTTGTCTGTGTCTGTCTAATG----TATGTTGTCACTGCACTAGTTATCTAATACTT--------------GTAGTTGTATACATATAGTCTGTCACATTAGCATTA-TGTTCAACTGTAACGTTAGCCACTTCTGACATAGTTTAGATCCACTGCTGTTTAACCACAGCAATTATCCTGTCTGCAGATGTTCTC-TTGACAGAGAACTATGCTATGACTGACAGCCAGTGATGATGAAAGTTTCTCCTGACATTAAGTTTGCCTAACACCTTGGTAGAAGTGCTTTAACATTTTCTTTGCTTTCTCTTGTCACATGTCACAACTGTAAGAAGCCTCCATACTGGTTGACATTTGACTTGATGATAAAGTAATTGTCTGCCTGCTTATGACTATATTacacacacaaaaacacatgcatctataca a score=4441 s hg17.chr15_random 19692 224 + 784346 CTCAGATGAATTTCTCAGCTATATTGCTTACTTTTGTTGGTCACAGAATTAACAGGAAAATTTATTTTTCTCTTTAATCTCCCTTAGAATA--TAATAATTGAATTCATTTCC--CACCATAAAACTCTCATCTCCTGCTTTGCTTTTTTATAAAGAGAAAC-TTTAGCACAAAATACATATGGCCCAAAGACATGTTGAAACATATACTGAATATATCTACAAAATTT s mm7.chr14 109875949 212 + 119226840 CTAACATGAATTCCTGAGCA--------CATCTGTGCTTGTTATGGAATCACTTAGACACTTAACTCTTTCTTGTCATTTGCCTAAGATTGCCTTACAACTATGCTCATTTGTGACATAAGAAATGTTCCATTTCTTGACTTATCTTTTAAAAATGAGCAACAGTTAGCATAAGG-----GTGGCCTAGAGACACAGTGAAACATCTACTGAATGTATC----AAATTT a score=11651 s hg17.chr15_random 25875 299 + 784346 AGAGCCACGACCCCATCCCCGCCTCTT-TCCTCTGTCCTG-CGCTAGCAATAAATAAGTTTCCCAGCCACAAATAATTATTAGAACCTCCTCCCCATGTGCCAGCTCCAACCTCTGCTAGGTATGATACAGGGGCAGCCCTACCCTCTGGAATATACAAAATGTTACACAGACACAGTATGTACACCGGGGAAGGTG--GGCCA-----CCCCAGCAGCCCATGCCCTCGCTGGTCCACAGTTAGCCCCGCTTTC---TGGCCTCAG---------------CTACCTCTCTGAA-------TAAGAAGATGGGAGCCCCCCTGAGGGAAACG s mm7.chr2 150233103 324 - 182548267 GGTGCCACAACCTTGTCTCCGCCTCCTGCCCTCTGACCTAACACTACCAATAAATAAGGTTCCCAGCCCAAAGTGATTATTAGAAGCTCTTCCC-ATTTGCCAGCTCCAACCTCCACTA----TGATACAGGGGTGTCCCTACCCC--GGTATATACAAAATAGTACACAGGTACAATATGTACACCGGGGGAGGGGAAGGCCACCCTGCCCCAGCAGCCTCTGTCCTGCTTGG--CGTAGTTACCCCAATTGTCATAAGGCCTGAGAGAATGGTACCCACTTTCCCTGTCCCAAAGTGCCTCAAAAAGATGGAAGCCCTCCAAAGTGGGATG a score=36803 s hg17.chr15_random 26624 1146 + 784346 aaagttatttaataaaataactttttataaaact--ttaa---------taaaag--ttttttaataaaaaaaCCCA---TAACTTTTTTATTTTGTGTT--TTTAATAAACAC--TTGCATAGTTGTATTACAATTTTGTAAAAATGAAA-CACATTATCTCATGTCAAGCATGCCCAGCATTTGCACAGTATCAATACCTTTAATACTATAGTTTTCAAGAAACACAAAATAAAATTTTAAGGCAAAAACAACACTTAGAAACAATTTAATGATTTATTACATTACAGTGGCATCACACCAGCAGTCAATAAGGCCACTCTAGGGAAAAATCTTTCAGTATTTCCATTACACATTCTGTTTACAAGAATTCACAAACTGGTAAAATTCATTCTAACAAAACTTGGCAAATAAAGCTTTGGACTGGAATTGGCATTTCTTTCTCTGCTTTTCCTTCCCACT---GTTTCTTTCTTTTATACTATAGTAT----TCATATTTTAAAATGTTTTAACTTATTTCAGAACATTAAGATAGCAGTTACatttttaatagttatattattttaaaatGACTCTAAGATAAAGTTTTAGAGAAACTATATTATGGATAGGGCTGATTTACA-TTTTCAAATTTTCTAAAAT--CAGCTTTCGTTTTAGAGCTGATTTTTTTTTCATTTCTGGAA-AATTATCAGGTTTAATCAAATACTTTTAAAATGATTATTATATATTGCCATCTTTAAATAGGTGTTTTGATTCTTCCTACAGAAATTAAAATGTATTCAGTGGAACTCACATTTTAAAATTCTATGTTTCTGATGAACTCTAACATTCCAATGTTGCCTTCTAAGCAAACTGAAAGCTGCCTTATACCGAATGAGGAAGAGCACAAATACTCGGCTGAATGAGGTATCGCAAAAGACTGCATGCACTTTGGAGAAAGACTTAAGTTAT----TGTCATACAATTTCCATTCCTTTTAGCTTTTTCTTAAATAT-ATGACAAATACCTACACAAAGAGTGGTATTTCAGTCAATATAGTAAATTTATTTTCCAGACTGACCTTCAGCTTAAATAT---GCCAGTGTGTGATTTAATCCATAGGCACCTCA----TGAACACATTATTGTCAGATTGGTTACAGATGCTAAACGCTATCCGAAGGTCATTCCTAGTCACTGA s mm7.chr12 113202120 1085 - 117814103 AAAGTCACTTAATCACA---CTTATTATACAAATAATTAAAGTAAGACTTAAAAGGATGCTTCAAAAGAAATACACAATACAAGTAATGGAGTTTGTGTTCTTTTAATAAACACACTTGCATAGTTATATTACAATTGTGTAAAAATAAAAACAGATTATTTCATGCCAAGCGTGCCCAGCATTTGCACAATCTCAATACCTTTAATACTATAGTTTTCAAGACACACAAAATAAAAATTTAAGGCAAATACATCACTTTGCAACAAGTTAATAGTTTATTAcatcacagcagcatcacagcagcatcTAATAATGCCATTC--AGGCACAGGGTCTCAGTA-TTCTGTTACG-----TATTTACAAGAACTCATAACTTGGTAAATTTCA-TCTAAGAAAACTTGGCAAATAAAGCTTTGGACTGGACCTGCCATTTCTTTCTCTGCCTTTTCTCTCAGCCCTAATCATTTTCTTTTGAACTCTAGTATCGCGTTGTATTTTAAAA-------------------------------CAATTACTGTTTTAAGTATTACATTATTTCAAAATTTCTC------AAAGAATCAGAGAAAGTATATGATCAATAAGGTTAACTTTTAGGTTTTAAATTTTCTAAAATAACAGCTTTGGCTATAG------CCTTTTCTTCACTGCTGGAACACCCATCAAGTTCAAGTGCATGCTTTAGAAATGCCTGTCACACAGTGTGCTC-TTAAACTGGTGT--------ATCCTAC--AAGTTCAAGTTGATCCACTGTGTTCTAATGTGTAAA---TTATGTCTCCAAGAAAGTC--------------------CTAAGCAA--CAGAAGCTGCCTTACTTTAAATCAGGAAGAAAGCAAACACACGGCTGGATGAGGGATTGCAACAGATTGCATGCACTTATAAGAACAATGTAAACGATTGTATGTCACTCA--TCTCCTTTCTTGCAGCTTTCTATCAGGTATGATG--AAATGCCT------AGAGTAGTA-GTCGGTTAGCACAGTGAGTTTACTTGCTGTACTGACATTTGCTTTGATTGTTGGGCCAGTATGTGACTTACTCCGCAGGCACCTACCTGTTAAACA---TATTTTCAGACTGATTGCAGATGCTGAGCTCAACCTGAATGCCAGTTCCAAGAATCTA a score=70952 s hg17.chr15_random 27770 2214 + 784346 TAT-------TTATCAGGGTA--AAAGTGAAGTGATTTCAACGATAAAAGTACCTTTGAAATAATTTATCAATGTATTAGATAAACCCAGTTTCAGAATGATAAAAGAAAAA---ACGTTAGACCAAATAATGTGGCTGATTAACAGTGGTCCGATTTCTAGCCCGAGGGTTTAAAATGCTCTTAAAGTAACCGTCTTTAAACTGAACTCAAAGAATGCAAAAGCGGCAAGTTCAGAAAATAAAAGGCGAGAACAGGACTTTAAGTGCATTTTAAACCCACGGGCTAGAAATCGGACCACTGTTAATTAGCCGCATTATTTGGTCTAACATTTTTTCTTTATCATTCTGAAACTGGGTTTATCTAATACATTGATACATTCATAAAATTTGGAAGAGTCAG-TTGAAGTCACAAGGACCGAATATTTGCAC--TCTTTCAGTGAATGCCAGCAAATCTGTTATTCCATCGGTAAAATCGTATTGTTGCTCTCCTGTTAATGTCATATTTATAGAAGTATCATGAGGATGCCAAATGCTAAAAATGGAGATGATCTAGTAACTAGA---AATCCCCACCGCAGGGAGCACACACACCTATCTCCCTGCATCCTAACAATGTGATGTGTTTTGGAACACAGACATTAGAACTTCATGAAGTTTT-----AACTGTTGAGTCTTTCCCAAGCATCATCAAGTTACGATTTAGGCAATACATAACTGAAATGCATTCATTCATCATGCATAGGCACAATCACATAAATATTGCACAAAATATGTCCCGAACAGAAACCCAGAGATACAAAAACATATTTCACTTTGT-AAAGAAGTCTGTGAGAAAATATAACTCTGTGATTGTATAGGCACGTTTCCTGATAATACATTGACA-TTCACGAACAGTAGATTGCACTGCAGTTTGTACACATTTTAAGTTTCATAAACTTCTCCTTGATTTTCAAAGATAGTATAATACCGTCTACTAAAACTCCCTTTTGTTTCAACTAAGTA-TCTCACATATATTAGTTTATAATAATGTTTCTATTATTTTTTAAAGTGTTTTCCATTCAAGGAAAAAGAAGTAAATTCCTATGTCAGAGTAACCAAGGTGGTTGAAGAATAGGTATTAGCCAAAGAGGTCTAGATGGTAAAATCAATCTTCAAGCCTCAAAGAATCTCCGTGAACAGAGAGGAATGCCAGGTGTCACACAGCTTTCCTTCACTCTAATTCATTCTTGACTAGAGCCTGTATGCCTGTTCCAGGGACATTTG-----AACTCGTAAAGGATTTCTTATGATCTTTACTAAATACATTAAGAAGAATGCCAACCAGTGCCCTTTTGTGTACTGGGACATGTAGTCATGTGATTAAAACAGGTAACATGAACTCTGAGTTTAAAATGTATTGTAGATACAAATGCTCTAAGCTAGGAAAGGTTTTCCACATCCACAGTCAACGATGGGAACCTTTCATTCCTCAGAAATAAGCCCTTTTTAGGTCATTGAAAAAGAGTACAAC-TGCTGCAGCTCATGATGCAGTAT----CTTCATGAGCCCAGAGCACATACAAATCCTAAGGGAACCACCATAATACACTGCTAATTCCTGGCACCGGAACAGATGAAACACACT------------CTATCCTGGACATACCTGCCAGAGGAGGCCACTTTCCTCTTCTGTGAGATTTAAAAAGCTCCCTCAAAAGGTTTCACTCCCATCACCAATACACAGAAAATGGAGGAAAGGCTGTTTCCAGTTCTTGGCCTTTAAACAACTCTAAATGTCAGTACTCATAGTGGCATATTACAAAGTAATAAACAGTGCACGCTTGGGGGCAAACTACATATTGAGCTAACGAAGAGCTCACTGTGATTAAGATTAGATCAA--ACAACAGCAGAACATAGGCAAATTTTGTCTGAATTCTGTAGTGAATATACATGCTGCAATAACATTAAAAAAGCATGGCAGCCTATTCCAAACCAGCGAGAACAGTTTTGGGCAAAGAGTGGGTCTTTGTGTGTTTGAACCCCCACCACGTAAGGGCAAACTCGATATGCATGCTAATGACCTACAATTATGAAATT------AAAAAAGAAAAATGCTAAAGGATGCCAGAGTGAACATCAGTGAGAGC--CACAGACACCCACTCTCTTTTAACTTTTTACAAATAAACTTAAAACTATAAATTAGAAACAC----AAATAATCATGAGTGACTCTAACATTCAAAGGAAGTAAATGAATTGTGTAGGAGAT s mm7.chr12 113203357 2044 - 117814103 tATAATCTACTTTTCATGATGGCGAAGTCAAGGGATTTGACCTATAAAAATACTTTTGGATAAATTTATAAGTATAGTAGAGAAGCCCCAAATAAAAATTATAAAGAAAAAAGGTACTTTATG--AAACAATGCAGTTAGTTAGTGG-GGCTGGCTTTCT-------GAGCTCAGCATA----GAGAGCAGCTGGCCACACGTGGCATTTAAGGAG-GTAAAGGCAGAATGTTGATGAGACAAAAAGAAAAATCAGG---------------------------------------------------------------TGATCT-------------------------------------------------------ATATAACGTGGAAAAGTCAGTTTGAAATC----------AGTCTTTGCATTGTCATTTAGTGACTGCAGGCAATTCTCTTA-CCCATCTGTAAATTGAAATTATTGCTTTCCTATGAATGTTATGT-----AAAATACTGTCATGATGGCAAGTGCT-AAAATGGAGGTGGTCTAAGGACTCTACAGAACCCCCACC-CAGGGAGCACACAGAC--ATCTAATAACCTC--AAGAATGTGA-ATGTTTC-CAGTACAGATATTTGGGTTTTGTAAAACTGTAACTAAACTGTTGTTTTTTTCC-------CCTCAAGTCATGATTTAGGCAATGCACGATTGTAATA-ATTCATTCATTATATATAGGCACATTAACATAAATATTGCACAAAATATGCCTTTAAATTAAAGCGAGAGGTATAAAAGCATGGTTTACTTTCTCAAAGAATGCTGTGAG-GAGTAGGACTC--TAATTGTATATACACCTATC------------TGACATTTCACAAACAGTAGATTGCACGGCAATTTGTAAACATTTTAAACTGCATAAACTGTTCATTGATTTTCAAATATGGTTTAATACTG--TATTAAAACTC------ATATCAGCTAAGTGCTATCACACATATTAATTTATAATAATG--TCTATTA-TGTTTAGGGTGCTTTCCACTCAAAG--GAAGAAGTAAAATTCTATGCCAAAATAGCCAATGTGGGAGACGAC----TATTAACCAGTAACATGTAGACAGTAACATCAATAATCG---CTTAAGAAGCCTCC-TGGGCACAGAGGAATGCCAGCTCTCGTGTGCTCTCCCTATGCTATGGGTC---CTTGGCTAAAGCCTACATGTCGGCTTCAGG----TTTGCTACAAACTCTTTAAGGTTTCCTTATGGATTTTACTAAATGCATT---ATGAATGCCAACAAGTGTTATTTTGTATACTAGGGTAAGTGGTCACCTGACTACAG-AGGTAACATAAAGTCT-ACCTTAGAATATATTGTTGATATAAGTGCTCTAAGATAGGGATGGTTTCTTACCT-TACCGTCAGTGATGGAAACTTTCCATTCTTGA-AAACAGTCTATGTTTATGTCATC--AATAAAGCACTGTGTGCTGGAGCCCAGA--GCAGTTTGGGAGCTCTGCAGCCTGGAGCACCTA-AGACCATAAGGAAACTGCCCTAGGCCCGCGTTCATTCGTGG-------GCAGCTGAGGCAGACTACTCTACATTCACTACTCTACATTCAGTGGTCAGAGCACACTGCTTTCTTCTTCTGTGAGACCAGGCAAGGTCCCCC-AATGTTAGTGCTCCTGCTCGGTTTACAGAGAAAATATAGAAAAGGCTATTTCCAGTTCGTGGCCTTCAAACAAACCTAACTATTGGTACTCATAGTAGCATATTAGAAAGTAACAGACAGTGCTTATTTGAGGGCAAATCACAGATGGAGCCAATTATGGGCCC-TTGTGATTAGGGTTAGATCAAATATAATAGCAGAACATAAGCAAACATCATCTGAAATCTGTAATGAATATATAATTTGCAAGAGCATTGGAAAAGCATGGCAGACCATTCCAAACCAGAGAGAACAG-TTTGTGC-AATAGTGGGTCTTTGTGTGTTTGTACTCCCACCACGTAAGGGCAAACTGAATATGCATGCTAATGACCTACAAGTGCCAAATTTTTAAAAAAGAAGAAAAATGCTAAAGGATGCCAGAGAGAACAGCAGGGAAAGCCACACAAAGACCCACTATCCTTGAAATTGTTACAAATAAATTT-TAACTGTAAATTAGAAACACATAGAAATAATCACAAGTGGCTCTAACATTCAAACGAAGTAAATGAATTGTGTAGGAGAT a score=15842 s hg17.chr15_random 30027 483 + 784346 CTCTTTGATGATGGTGATGTTTATCTCCTTCTTCTTGGCAGCCAAGCCCAGCAAAAGAATGGCACACAGCAGTTGTTGCCCAAGCCTGGGTGCTCCTGGTGGTCCTG------------------CACGATCGGCTGTGCAGTAGGCTTGTCAAGGAGAGGATCCTCCCTGGCCTCTCCTTGGGCAGA---------GGAGGTGAGGCTCACCTCACAAAGATCTTTGGAGA------GAGGGAGGCAGGGATCTGAGCACAGTGGGA-GCCCCCTCTTCCTGCCTGCCCACCCCACCTGAGGGCTCTACTCACCACCATGCTTGTCTGCAGCCCCAAGCTCCTGGGGGGCTGGGGCTCCTGGACCGGGCTCATCAGCAGGGTTGTGGGCAGCGGCCAGGAATTTTCTGTGCCCATTGTTGTAGTTGCT-GTAAGCCGCAATACCATCTGCTGCAGCTCCAGCAGCTTCATCTGGAGGGAGGGGTGCTCAGCTGCCATGCCGCTGCCTGCGcccaccc s mm7.chr2 150234333 500 - 182548267 CTTTTATACAACCATGATCTTCACCTCGTCGTTCTCATCGGCA-----CGGTAGAAAAAGGGGATGCAAGGGTTGCTACCCAGGCCTGGCCGCTCCCGGGGGTTCTGGATCTCACGCAGCAGCTGCATGATCTGCTGTGCAGTAGGGTTCTCATGGGGAGCAGGTACCCCTGCCTCTCCTTGTGCAGGCTCTATATCGTCAGCCAGGCTCACCTCCCTGAGGTCTTTAGAGAAAGGGGGAGGGGGTCATGGCTCTGCACGCCATGGGACTCCTCCCCTTTGTGCCTTCCCAAGAGAC--AACAGCTCTACTCACCATCCTGCTGGTCAGCAGCACCAAATTCCTGGGAGCCTGTGGGCACTGGGGTGAGCACGTCACCAGGGTTCTGAGAGACGGCCAGGAACTTGCCCTGCCATTCATTGCGCTCGTTCACAAGCCTCAACACCAGCTCCTGGAGCTCCAGCAGCTTCACCTGGAGAAAAAGGAGCTCAACTTGAAGG-----------GCCCAGCC a score=11683 s hg17.chr15_random 30536 350 + 784346 acAGAGATGTTGCACACCCTACCTTCATCTCCTCCCTGAGCT---CCAGCCTGATGGTGT------CCTCCTCCCAGTGCCGCATCTTTGGCACGGCCCCCTGGTTCTGATAAAAGGTGATGGATTTTCCTGCGG-------------GAGGACAGGGCTCAGACGCTGGGGCCCCTCCG----ACGGCCCTGTA--GCTCCCCCTGCTGTGCCCTGGCCTCCCACTCACTGATGGCATCTCTCTTGCCAGTA--TTGAATGAAGCGAAGTTCTTGTTTCTTCACCAGCTCACTCAGGTCTGCCTTCTCCTCCAGGTGGTCCATAAAGCTGCTCTGGAGCCAAAATATTGTAGTCACAT---CTCGGCAGC---GACCTGCCCTCA s mm7.chr2 150234855 380 - 182548267 ACAGAAGTGTAGG----CCTACCTTCATCTCCTCCTTGTCCTGAGCCAGCCGGCTGATGTATTCTTCCTTCTCCAAATGCCGAGCCTTCAGCACCGCCCTCTGATTTTGGTAAAGGGCAATGTACTCTCCTGTGGAGACGGCAGGCAGGTGGACAAGGCTCAGACACTGTGGCTCCCCCAGTCTACCCCCCTGCACAGCCCCCACTGCCTTGGGCTGGGCTCCACCTCACCAATGGTGTCTGTCTCTCCAGAAAGCTGAATGCAGCAATGTTCAAGCTCCTCTACCCTCTCCTTGAGCTCCACTTTCTCCTGCATGACCTCCAGGAAGCGGCTCTGGAGCCAAGACA--GAGGTCTCAGGGACTCAGGAGCCCTGGCTGGCCCCCA a score=34532 s hg17.chr15_random 30936 1437 + 784346 CAGCTTCTCCGTGACTTCCTGCAGGGCCCAGTGGGTCTCCCCACTCACAGACTCGCCCCCAGGCCCTGGGGCTCCAGGGCCTCTGGCTGCCTCT--GGCTCCTTCTGGGCCGAGGCCACCAGGTGAGCCAGGCGCTGGCAGC-CACCCTCTGCTCTTTCACCTGCTCTTGTAACTGTGCCTGCTTCTCCTGGGCACTAGCTCCAGCGGACTTGAAAAATGCCACCTGAGGGCAAGATGTGAGCAT-TCTTCTAGGGGCATACACAGAAGAAATGGGGCAGAGAGGTGGAGCGCAGCCCCTTCCCTTGGGGCCCCAGAGACTGCACATGTTGGTCACAGGTGAAATGGTGTCTGACCACTGGCTCTCGG--AAGGGGTGAGGGTCCAGAGAAATCAGAAGGCAGGGAAACGAAGAGCATAAAGGGGTCTTGGAGGGACCACAGAGAAAGGTGGCAAAATGGGTGCAGGGGGAGTCAGGCTCACCATGGCCTCCCTGCTCTCCAGGTCCTGTGGGATGCTAGGAATGGGCCGAGGTGCCTCCTCCCCCTCACTGTCCAGATGTCCTCCTCCATCTCCTGGGGGTGGG--GGTGGTGGCCAGAGGGGTCCTCAGACAACTCAACAAGGGAAGTATTGTGGGCCCACCTCTACCTCCACCCTCATTGTGTAACCCTGAGCCAGCCCCTCCCCAGAGAGGAATGAGCTGCTGTTATTTATTTTTACTTTGAAGAACCAAGATCTTGCTATACTGCCcaggcacattcccactactggtcggtgcgggagttctgacctgctccctttctgacctcggccagttcagccatccttaggcaacttggtggccccccgctcccaggaggtcaccatattgatgctgaacttagtgcaggcaccc---ggttagtataATGACCAGCTGTTCTAAAGGTCTCTTCCAACTCCTCAATCCTATGCTGCTAGCAGTCCCCCCTTCCTCCTGGGGCTCTCTCCTCTTCCTCTGAGCGGTCTCCCGTACCTTCCCCAGGGAGAGCCATGAGGCTCAACTGGGCCGTTAGCTGCTGTTTCTGCTGGCTGGCAGCTTCCAGACGCTCCTAAGGGGCCAGGAAAGAGTGAGAAGGCACAGAGTTTGCCAGGTCGTCCCCCTCACGGCCCCATCCTCGGCAGCTCCCTCCCCTGGGCCTCCTGCAACTTTTGGCAGGCCATCTCGGCCACCGCTTTGCCCCAAGCTTCCTGCTGCTGCAACTGGTTCATTAGCTGGGTCTGCTGCAGCCACTGCCTGTACAGCGCCTCCTTCTCACAGGTCAGCTGCTGATAGGCGGCCACCTGCTGCTGATAGGTGGCCACGTACTGCTGCAGGTGACCCAGGTAATGGTCTGGCTGCTGCTGCAGACTCTGAGCCTCTTGGCTCTTCAGCTCCACCTGCAGGAAGACCCTGGGTGTGAGGGCA s mm7.chr2 150235266 1083 - 182548267 CAGCTTCTCCATGGCTACATGTAGGGCCTGATTGCTCTCCTCAGATGCAGAGTCATCCACAT-TCCTGGGG-------ACCACTGCCTCCTTTTCAAGCTTGCTTTGGACTGGGGCTGCCAAGTGAGACAAACTCCGGCAACGTGCCTTCTGCTCTTTCAGCTGCACACGTAGTCGGGCCTGTTCTTCCTCTGCTCTGGCTATAGCGGCATTAAAGAATGCCACCTGCACACAAGAGGGAGGTGTGCCTTTCAGGGAAATGCTCAGGACAAAGGGGGCAGGG-------------------------------CAGAGA-------------------------GGGAGACTGACCACTGGCTTCCAGGCACAAAGTGGCAATCAAAAGAAGTCAGAGGGTAGGAAACCGAGGACCACAGAGG-----TAGA--------AAAGAGAAGGGGCAAGACAG----------AGCCCAGCTCACCATGGCCTCTCTACTGTCTAGGTCTTCTGGGATGGCCAGACTCGACTGAGGAACCTCCTCATCTTCTTCCTCCTGGT------CCACATCTCCTGGGGGCAGACAGTAGGTTGTC-------TCCTCTAATAATCCCATCAGGTAGACTGAGTGGGCT--------------------------------------------------AGGGGAA----------------------------------------------------------------------------------GAGAGCTCAGA---GCCCCACCTCTG-----------------TATCCCTA---------------------------------------------CTGAAT-----------ACCCTGGGGTCAGCCCAAT-------------CAAAGCTTCTCCAAATACATCAACTCTAG-----------------------------------TCCTCTCCTCCTGGGTGGTCT----TACCTTCCCCAGGGAGGACCAAGAGGCTCAGCTGGGCTTGGAGCTGTTGGTTCTCCTGGCTGGTAGCTTTTAGGCGCTCCTATGGGGCCAGGAAAGAGTGAGAAGGCACAGAGGAGGCCAGGTCCTCCCCCT---GGGCCCAGCCTTAACAGCTGCCTCACCTGGGCCTCCTGCAGCTCCTGGCGGGCCAGCTCGGCTGCCATCTTGCCCTGTACCTCCTCATGCTGCAGCTGGTCCATGAGCTGAGTCTGCAGCAGAAGCTGCTTGTGTATTGCCTCCTTCTCAGAGGTCAGCTGCTCATAGGCCGCCAAGTGCTGTTGGTAAGCAGCAGCGTACTGCTGCAGGTGGGACAGGCACTGGTCTCGCTGCTCCTGTAGACCCTGTGCTTCTTGGCTCTTGAGCTCCACCTGCAGGACGGCC--AGGAATGAGGGCA a score=3896 s hg17.chr15_random 32503 228 + 784346 ATGCCTCCTTCCCCAGCCTCAAATCTCATGTCCTCTTCCCACCATTTCAACTGTAGGCCACAGAATGGTAGAAAAGTAGTGGGAGCCAACCACCATCTGCTAAAtgtgctac--aggcctaatgcttcccatgtattatctcatttaatcctcagcacctctgtaaggaaaatgctaacttccttttgaagttaaagaaacagagacttagagatgcgaagtacttgaat s mm7.chr2 150236349 195 - 182548267 GTGCCTTTGTAACCAGCCTCACACC-----CACCTTTCTCATCACTT------TAGGCCA-AGAGTGGAA-------------AGCAACCCACCCTGTTCTGCACTAACTACTAGTGCCTGATATTTTATGCACATT-TCTCATTTAACCTTTAACACTTCTCTGAGGA-------AACTCATCTTTTAAGTTCAGTGAAT--GGGTTTGGAGATGGGAAGCATTTGAAC a score=13341 s hg17.chr15_random 33190 797 + 784346 GGAGGAGCCCAGGGCTACCCACCTCTAAAATCAGAGGGCAGGAAGCAAGAAACAGCCACAGGACTGCCCTGGAGGGTGCTGGGGTCACCTGCCCCTGGGCTGGAGCTACCGCTGGCCTGGCACCTCCCCTCCCCAGAGGCTGGTGCCCACCCACCTCCCAGACCTTCTTGGATGGGGTGGAGGTTACCGTCTCCTTCACCTTGCCTAGCTTCTCCTGCAGCTC------------------------CTTTACTTGCTGCTCCAACTGTAGTACGCT---------CTTGTTCTCATTGTTCTGGACAGAGAGAAGCAATCAGCAGCCACCCACTGCAGCTGGAGACCCCAGAACTTGGTG---ACTGCCTCCCATGGCACCGGGAAGGGTGGAGGCAGGTTAGAAAAATCATCCCCTGTCTCCCACAGCCACCAGAGCAGGGCTCTGGCTC-ACAGGTGCCTTTAGGAGTAACATTTCACTTGAGGGCTACACTGccccattttataggtggggaaacaaaggcctggagGGCTAGGGAGGAGGGCAGGCTCCCCAGCTGGGGCAACGCACCAGCTCCTTGAAGCTGTTCTGTGGCTCGGCCAGCTGC-------------------------------------------TGAAGCCTCTCCTCCTGCTCT---GGA----------------AGCCT-------------------CTCCTGCT---GCTCCCGAAGCCTCTCCTTTTGCCCCTCATTCAGGAGACTTATGCGCTGATTGTACTCCACCTGGGCCTGGAGCGCTCCTGCCACTCTCTCTAGTTCCTTCCTCAGGTG------------CTGCAGC------TCCGCCTCAGAGGGCACTGCTGGGGGCTCCGGGGGCAGAGGTTCAGCTGAGAAAGGAAGCAG--ACAATAAGAG s mm7.chr2 150236627 774 - 182548267 AGAGCAGTCCAGGACTGCCTGCTCC------------------------AGGCTGCAGTTAGACTGTTATGA--------------------------------------------CTGGCACCCCCC---------------------------------------------GTGGTAGGCCTTACCGTCTCCTTCAGCTCTCCCAGTCTCTCCTGCAGCTCTCCCAGCTTCCGGGCTAGCTCTTTCTTGACATGCTGCTCTGACTGCAGCGCACTGGTGATCTCCATGTTCTCATTGGTCTGGACAGAAGGCAGCAGTCAGTAG-GACCTAATGTGGCAGGGGTCCCCAGAATTGCATGTGTGCTCCCTCCCACAGAGCAGGGAAGACTGCTGG------------ATCAT--------TCCCACA--CACCA---CAGGTCTCTGGATTGAGAGGTGCTTTGACAGCTAGCACCTCATGTGAGGTGGACAGCACCC-----------TTGAGGGTTACATTCCCTGTGAGCAAGGAGGGCCTGCAGGATT--------------CGCACCAGCCTGACGAAGCCGTTCTGCAGCTCGGCCAGCTGCTCCTTCAGCTCTCGGTTCTGTGACAGTGCTCTGCTGATGGTGGTGCGGTCACTCTGCATGCTCTCCAGGATCTGCTTGCGCTCCTCGGCCTGCTCGCTCCAGCGCTGGGCCTCCCGCTCCAGCTCCAGCAGACGCCCCTCCTGCTCCCGGTTGAGGTGGCTCAGGCTCTCATTGTCCTGCACCTGAGCCCGTAGCTGTCCCGTCAGCCTCTCCAGTTCCTTGTGCAGCTGCTCGACCTCTCCCTGCAGCTGCTCTTCCGCCTCGGAGGGCCCAGCTGGAGGCTCTGGAGGCGGTGGCTCCTCTGAGAAAGGAAGTAGGCACAGTGAGGG a score=18447 s hg17.chr15_random 34122 906 + 784346 ATGGTAGCCAGTCTTCCAAAGCACTTTCAGAGAAAGAGCACTGCGGGTGGCTGACAACGGGccctctttgctgatggggacactgaggctcat-tgagatgacaagacttgccGTC-------TCCTGGCACAGACCTCTTTCCCTCTGCCTCAAAGCCCTTCCATCCACCCACCTCGCTGGGGCACTCCAAGCCACCCTCACAGCCCTCTGATGCCAGTCCTGCTGCCAGGTCACGCCAGCCCCATCTTACCCATCTGGTTTTTGAGTTTGGACAAGCTCCTCTCCAGCGTCTCTACCCGATATTTATCATGCTTCTTCTCCTTCTTCAACGAGCAAACCTGCCCAAAGCACAGGGGG----AAAGGGCCCTGGAGAGAGGGGCTGGAGGCTGGACAGGCTGCCCTCTCCCTCTCTGCCCCCACCTCCACAAAGCCCAGTCCCATGACCACCTCTGGCTCTACTATTCCCATTTTACAGGTGCCCAGAAAGATC-CAGTGACCTATCTAATGTGGGGGGGCTGAAGGGTCAGATCTCACCTCCTGCGACATTTTTCTCATCCTCTGCTGCCACCGGGCCCTCTCTCCTTTTAGATGTTCAGCATATTCATCCCTCTCTAGCTGGACTTCTTTAAGTGACTCCTTCAACTGCAAGAATGGGCACAGAAATTAGGAAGGGC--TGTCACTGGTCCTCACCTGCTCCTGGTTACCTGGGGTCATCTTCCTTCCACATCCCTCCCTCTGAACACCTCACCTGTGTCAGCTGCGCTTTCAGCAGTGCCTGCTCCCGCATGGACTGCTCTAACTTC----CACTCCGTACGTGCTTTACTGCGGCTGGAGAACTGCTGAAGAG---TGAGAAGTTTCAATCTGGGGAGGCCGGGCCATTCCAC-ACAGTGCCCCTTAAAAGGGCCAGGGCTAGG s mm7.chr2 150237511 823 - 182548267 GTGGTGCTCAGT---------CACCTGCAGAGGTATAGCAGTAGGCATGCC---------ACCCTGTTT---------TACACAGAGGGACATAAGAGATGACAAGGCGTGTCACCTGGTCAGTCCTGACAGAGACCTTTTGCCCCAT--TACAATGCTCTCACACCCCCTTGCCC--CCAGGGCTATGGAAGCCACT------GGCCTTTGA-GCCACTCCCGCTCTCAGGTCACCCTTGCGCTA-CTCACCCATCTGACTCCGGAGTGCGGCCAAGCTGGTCTCCAGCTCTTGTACCTGCCGTTCTCTGTGCTCCTTCTCTTCCTTCAGTGTATGCACCTGCCCAAGGCACAGGGGGCGCTAGAGATCCCAG----------------------------GCACCATCCATCCCCAGGCCCACCTCTGCAAAACCAAAGCCCCGAAC--CCCTCAGCTGCACCACGCT---------GATGCTCAGGAAAAGCAAAGACACC--------------------AGAGGCGAGGCCTCACCTGCTCCGCCATTTGCTGTACCCTCTGCTGCCACATGGCACTCTCTCCTTTTAGGTTCTCCGCATACTGGTCTCTCTCCACCTGGAGCTGCTTCAGTGATTCCATCAGCTGCATCGGTCAATGTACACGTTACTTGGGGCTGTGTCCTTGGTCCTCACCTGCCCTTGGCCATCTGGGGTCATGCCCTTCC-----CCTGCCCCCACAGATCCACACCTGGCTAACATGGGTCTCCAGCTGAGCCCGCTCCTCCATGGCATGTTGTAACTGCTCATTACCGCCTGCG-GCCGAAGACTGACTAGAAAACTGTGCGAGGGAAATGAGGGGTT--AGGTCTGGGAGCCTGGGCTGTTCCGCTGCAGTGCTCCCCACAAGAGTGCGAGCTAGG a score=8018 s hg17.chr15_random 35651 539 + 784346 AATCTCTCTGGAGAGTAGAAGCCTGGGAGAAAACCAAACCAAACCCGTTCTCCCATTGCCACCCAGAGACACTGTCAACGTGTCGAGCTCATGGGGGAGGTGTAGGCTTTTCACACTGTCAAGGTCTGTGGTAAGGAAGTCAGGCAGCCTGAAACCTCTCTCTTCTAGGTCCCACAGTCCCCATTCCCCTTCCAGCTGGAAACCTGTGCTGCAACCAGAGGAAACAG--AAGTGGGCAAGAACACTTAGGGGACTGGGTCCTAAGACCAA---AGGCCGGTCTTGTGGTAGTAATGACAGTTT-GTAGCGGGACTGTGACATCACTACATTCTACTCCTCGGTGGAGTGGTTGGGGGGGACACATGAGTGCAATGCCCAAGTTGCCGCTTTGAGACTGGGGAGGGGGTCACAAAATTGGGAGCCAGGTCCTTGGAGACGTGACCCCAAAGAGCCCCGGGAGGTCAGGCTTGGGGCGGCAGGAGGTGAGGGCCAATTAAGGAGCAAGGAGCTCCAGGAGTCACATCCCCAAAGTCACCCTGTGGCA s mm7.chr2 150251946 405 - 182548267 AGTCTCTCTAGAGAGCAGACAACC-----AAATCCAAACCAAACCAATCCA-----TGTCAGCAAGGGGTGCTGACA--GTGTTGTGCTCA----------------------CACT----AATGCTAAGTTAAGGGAATGCGGGCGCCTACAGCGTCTCCGCACTAGATTCCACA--CTTGGGCTCCCTTCCAGGTGGAAATGGGTTCT-CCACCAGAG-AAACGGGAAAAGGGGCAACAACA-TTAGGTGAGCAGGT----GGAGCAATCCAAACCAGACTCGGAGTAGTAATGACAGTTTCGAGGGGGGACTGTGACGTAACTACATTCCACTCC-------------------------ATACTACCAACGCCCGAGTCGCC----------------------TACAGGGCCAGGACCGAGGACCTTGGAGAC---------AGGTGCCCTGGGAGGTCTGGATTGGAGCGTCCGGAGCCGGGGGCTAA---------------------GAG----------------ACCCTGTGTCA a score=14872 s hg17.chr15_random 36316 604 + 784346 CTGCTCAAAGTCACCCTGGTGTGCCGGGCAGAGCAGGGGCAGGACTTATGAGGGGGTTGGGCTGGCTGACAAGATTTTGGTGTGGGGAGCCCAGAGGCACTGGGGTGGGGGGCCCAGCCTGGTGTCCCTCAGGAGTGGCACAGACTCTGG-CAGCAGTTCGGCTGTCAGAGGGGGCCTCGGGTTGGGTTGGGGTGTTG-------GTGCG-TTTACCTGTTCCTTGGCCTCGGCCAATTTGCTCTGTCTGGTTTCTTTGGACATCATAggatgggtagggaggtggggatgggtagggaggtggggatgggtagggaggtggggttggggCCACATCAGCATGATCCAGGTGAGGA-CAAGTATATACCTCCAGTCACCTCTACGTCGCTGTGTGACTGAGCCAGAGGAGGCGTAACCAGGGCTGCACTAGAATG--CAGAATAGGGGTGTGGCCTTCATGCTTGAAGCCCATTGGTCAATGAGAAAGATGAAAGGAAAAGGAGGTGTGGCCAGACAGCAGCGTGTCATCAAGGACCTGTGTTGTC-ACAAGGAAAGCTGCCTATGCAACCGCTGTCCCCGCCCA-----CTCCAGGAG--AGGGGCGGGGCTGGCTTTCACTT s mm7.chr2 150252351 574 - 182548267 CTGACCAAAGTCACCTAGGGGCGACTGAGAGGGCGGGGGCTGGGTTGCTGAGGGGGCGGGGCTGGCTGAGAAGACTTCACTG-GGGGAGCCCAG-GGCGCTGAGG---GGTTCTTCTACCCGTGTGTCTCGGGAAAGACTCGGACTCTGGTCATGGGTCCTGCCGTTGGAGGAG--CTCGGGTGGGGTCAAGGGGCCGCGACCCGGAGCGCTTTACCTTTTTCTTGGCCGCAGCCAATTTGCTCTGCCTGGTTTCTTCCGACATCCCGGGGCGGGGAGGG---------------GGGAAGCGGG---------------------GGGGCCACATCACCACGATCCCGGCAGCCACCGCGAAACTGCTTCCGGAAGCTACGGCTTCTCTACA----AGGGCCAGAGAAGGCGGGTGCAGAGCGCCCCTTGGACGCTCGGAAACCCAGCGTGACCTACCTTCTCCAAGCCCATTGGCTGATGAGAACGATGAAC-GACAGGGAGGCGTGGCCACGCGGTCGCGAGGCCTGAGCGACGGGTGGAGTTAACGACGAGAGCTGCGCGCGCAGCCA-TGACCCCTCACAGCGGCCTATGGGAAGCAGGGGCGGAACC-GCTTTAACTT a score=17969 s hg17.chr15_random 47169 671 + 784346 GCGGCCTCTCCCCT--CTCTTAGAG-----TGGGTGGGGACAGTGGTTGCATGGGCAGCTTTCCTTGTGAGC--CAAAGGTCCCTCTGGACACATGAT-GCCTGGCCACGCCCCCTTTCCCTTTCATCTTTCTCATTAACCAATGGGCTTGGAGCATTAAGGCCACGCCCCTATTCTG--CCTTCTACTGCATCCCTGGTTACGCCTCCTCTGGCTCAGTCGCACAGCTACCTGGTAGGTGACTGGAGGTGTTGATCAGTGCTTGGTGGGATTTTGCTGATGTGGCCCCAAGCCCGCCTCCCTCCCCACCCTGCGATGGCAGAAGAAACTCGACAAAGTAAATTGGCAGCAGCCAAGAGAAAGGTAAAAACACACCAGGTCACGGACCCCCAACCCAGCCATAGATCCTCTCCAACGACAAGACTGCTG-CCAGAGTCCATACCACTCCCGAGGTTCACCGGACTGGGGCCCCCACACCAGTGCCTCTGGGCTACCCCCACCAAAGTTTTGCCAGTCAGCCCCACCCCTTCAGCAAGCAGCCCAGTCTCTGCCCTCACCAATCACCCCAGGGTGACTTTGGGCAGGTGAATCCTGGGGCTCCCCGCTCCTTTACTGGGCCCTCATCTCCTGCCACCCCAAGCTTGACCTCCCAGGGCTTTTTGGGCTCACATCTCCAAGGACCT s mm7.chr2 32295350 627 + 182548267 GCGGTTCCGCCCCTGCTTCCCATAGGCCGCTGTGAGGGGTCA-TGGCTGCGCGCGCAGCTCTCGTCGTTAACTCCACCCGTCGCTCAGGCCTCGCGACCGCGTGGCCACGCCTCCCTGTC-GTTCATCGTTCTCATCAGCCAATGGGCTTGGAGAAGGTAGGTCACGCTGGGTTTCCGAGCGTCCAAGGGGCGCTCTGCACCCGCCTTCTCTGGCCC--TTGTAGAGAAGCC--GTAGCTTCCGGAAGCAGTTTCGCGGTGGCTGCCGGGATCGTGGTGATGTGGCCCCCCCGCTTCCCCCCTCCCCGCCCCGGGATGTCGGAAGAAACCAGGCAGAGCAAATTGGCTGCGGCCAAGAAAAAGGT-AAAGCGCTCCGGGTCGCGGCCCCTTGACCCCACCCGAGCTC--CTCCAACGGCAGGACCCATGACCAGAGTCCGAGTCTTTCCCGAGACACACGGGTAGAAGAACCCC---TCAGCGCC-CTGGGCT-CCCCCAGTGAAGTCTTCTCAGCCAGCCCCGCCCCCTCAGCAA----CCCAGCCCCCGCCCTC-TCAGTCGCCCCTAGGTGACTTTGGTCAG--TGACACAGGGTCT-------------CTTAGCCCCCGGCTCCGGACGCTCCAATCCAGACCTCCCAGGGC-----------------------ACCT a score=8158 s hg17.chr15_random 47981 435 + 784346 GTCTCCAAGGACCTGGGTCCCAGCTCTGTTTTTCCCTCCCCTATCATGGAGCGGTGACTCGGACATCATGCTGATGTGGTCCCTCCCCCTCACCAGGAAGAGTGGAATGTAGTGATGTCACGGTCCATCC-AGTAACTGTCATTACTG---CGAGACTGGCCTTTGATCTTATGACCCAGTCCCCTAAGCATTGCCACCCCATTTCTGGTTCCTCTTGTCACAGCACAAATTTCCAGCTGGAAGGGGAATGGAGATTGGGACCTAGGAGCAAGAGGTTTCAGGCTGCCTCACTCCCTTAACACAAACATTGACAGCGGGAAAAGCCTACACTTCCCCTGTGAGCTCAAAACATTGACAGTACCTCTGGATGGCAACTGGAGAATGGGTTTGACTTGGTTTGGTTTTCTCCCAGGCTTCTACTTTCCAGAGAGATTTTAA s mm7.chr2 32295977 348 + 182548267 GTCTCCAAGGTCCTCGGTCCTGGCCCTGT----------------------AGGCGACTCGGGCGT--TGGTAGTATG---------------------GAGTGGAATGTAGTTACGTCACAGTCCCCCCTCGAAACTGTCATTACTACTCCGAGTCTGG-TTTGGATTGCTCCACCTGCTCACCTAA-TGTTGTTGCCCCTTTTCCCGTTTCTCTGGT-GGAGAACCCATTTCCACCTGGAAGGGAGCCCAAGTGTGGAATCTAGTGCGGAGACGCTGTAGGCGCCCGCATTCCCTTAAC-------TTAGCATTAG-------------------TGTGAG--CACAACACTGTCAGCACCCCTTGCTGACA--TGGA--------TTGGTTTGGTTTGGATTT-----GGTTGTCTGCTCTCTAGAGAGACTGTAA a score=1066 s hg17.chr15_random 48417 113 + 784346 AAATTTTTTGTGAGTTCTCCACCTCACATTCTAATTCTCCATGGTTCTGGGACCAGACTGCCCTTCAGTCAGTGGTCTGTGAAGTGAGATTTGCTCATCTTCTGTGGAATAGA s mm7.chr2 38980277 109 + 182548267 AGTCTTTTTCAGAATCTTGAACTTTGCACTTGTACTCCCTACTACTTGGGAAGCAGAGTGTCCC-AAGTCAG-GCTCCCTGGGATGAA--CTGCATCTATAATGTGGGGTAGT a score=5642 s hg17.chr15_random 48530 314 + 784346 TCTTGGGAAACTGAACTTGACAGCTTGAATCTTCCTC---ATATTATGTAAACCTGGGGTACTTTGAGTGCCACAGGATACATATGGGACATCTTTC-TGAAGCATCAGTTTCCATTGATTCTCTTGAGATCAAGAGAAAAAACATTAATGTACTTAGGGATGACAGTCACATAGGTTTCTAACAGTATACCAGACTTCTCTCTGAAATGAGGCTTGGGTTGTCCTCTTTCTGATAAATTCCCAGATTTAACAGAAAGGCTG---------------CCTTCTGCCATGAGGACACATTGATATAAGAGTTTGAGAGGTAC--AGGTGCACTTCT s mm7.chr2 32296365 307 + 182548267 TCTTGGGGAACTGAACTT---AACTTAAAATTCAGCCAGAATGTCTTTTCCAACTGGGGTG--GTGAGAAGCACGGGATGCGGGTGAGGCATCTCACGGGAAACATCACTTTCCCATGCTTCTTTTGAG----AGAAAAAAACCATAAAAGTCT---GGTTTGGCATTTTCATAGATTTGTAG---------AGACTTCTCTCTGCGATGA--CAAGGGCTGTGCCCTTTCTG-----TTCCCATGTTCACTAAAGCCGTGGCTTCACGGTTTCTGCCCTTCTGTCATGTTGTAAACTTAGGAAGCAGGTTTAGGAAGTACTGCGGTGTACCTTT a score=3682 s hg17.chr15_random 48891 134 + 784346 CAGTTCCTGCCTACTTAATGTTTACTTTTCTAGCTCTGCCTCTGG-TTTTGGTCCCTGGCAGCTGATGATTCTTGGTAAAACCCCAGAGTTTGGAGTCAGAAGACTGAGTTTCAAAGTTCATCTGTCGCCTTTTT s mm7.chr2 32298571 122 + 182548267 CAATTCCTGCCAACTAAATGTTTACTCTCTGGTCTCTACCTTTAGATTTTTCCCTTTGGGAGCTGC------------AAACCCCAGAGCAGGGCATCAGAAGATTTGAGTTTAGATTCCGTGT-TTGCCTCTGT a score=2472 s hg17.chr15_random 49030 112 + 784346 CTTCTTTTTTTTTCTAGCCATGATATCAATCTCTTTGAGTCACTAAATGATTGTGACAACACCTTGTACAGTTGTTGGTATCATTAAATCAGATG---GTGTATAAGAGTATTTT s mm7.chr2 32298788 109 + 182548267 AATTACTACCTTTTTAGCCATGCCAT-----TTCTTCTGCCATTAAGAGGTCATTATTATATCTTGTAGACTCGT-GGTACCATTACATGAGACTTACGTACATAAGAGTATTTT a score=13540 s hg17.chr15_random 49157 552 + 784346 GAGGATGTGGCTGCAGGGGCTGATAGTTCTCATGAGTATTACTGCTCTTGTTTCTGACAGTTAAAAGAATATTGGCAGAGAAACAGCCCTGGTGTTCCAGCAGGAGCCAAGAGGAACAGGAAAAC---AAATGGCAGCATCCATGAGACAGCCACTTCTGGTGGTTGCCACTCACCTGGAGATGTGAGTCTTGGCTGACTAGGTTCCTGGGGACAGGGGAC-----------------------------CCAAGGGGcactagagggtaattgttaaga---------ttgtgg-----------------------atggactg--------------------ttgggt---------acctgtgaagaat----tctgggtttgaatcctgcctctttgtctgctagggatatga----attagggcaagttgctagacctcatcgggcctctcttttcacatctgtataatagaggtggtattgtttcacttccatttgtgaagtttaaatgagatTTGTTATTGTTGTTTTTATGTTAAT--CCCTAGTACATGGCCTGCTGTAAACACCCAGAACACCCAGGATATGGTCATTGCTGTTCGATTTTCCTCATCCCCAGTCTCAAGGGGAAGCCAGGACAATGAGAACA s mm7.chr2 32299347 635 + 182548267 GAGGCTGTGAGTGT-GAGGCAGATGGCTCTCATT--TCTCTCTGTTCTCCTTTCC-ACAGCTGAGAGAGTATCAGCAGAAGAACAGCCCGGGTGTTCCTGCAGGAGCAAAGAAGAAGAAAAAGATTAAAAATGGCCATAGCCCAGAGAGACCCACTGCCAGTGACTGTCAGTCACCAGAGAATGTGAGTCTTGGCCAAC-AGAGTCCTGTGGAATGGGGGCAGGTGGGAAGAAGCGGGGAGGGCTGTGGTTCAAGTGGAAATGTCAGGTGCTGGTTAAAAAGTCTGGCTTTGAGGGCTTGTTGCCTAGTTCAATGGTAATGAACTAGGGCTCATCTCACAATGGCCCTGGGTTTTATCTCAGCACAGGAAAAATTaaatctgagtctgaattctatctctccatcagttggcaatatgataactttagggcaagttggttaaactctctgagcctctttttacatagctgtacaatagcggtaatatt-tttaatgtgtatctataaagattaagtgaagtTTATTGCGGTTGTTTTTCTATTAATTCCCCTAGTGGAGGGTCTGCTGTGGA-------GTTAACAGTGAGCTAATAGGTACCGCTTGATTTTCTT-------GGTTTGGGGTAGAAATCAGACCAGAGGGAACA a score=66545 s hg17.chr15_random 49735 3007 + 784346 GGGCCGCAGGGTGCTGTGGTGGGGAGATAAGAACCATGAGAGAAGTTGGCACAAAGGAGTTATGGGACAAAGGGTCCAAGATAGGCAGAAAAGAAAATTGTGCCAGTTGATGGGGAAGAAAAGAAGTCAGAGGGCTTAGATACTGAGTGGGACAGAACATCTTCATGTGCACTCTCATCTCTTGTAGTCAGCAACAGGTATCCACGGGGAGAGCCCTACATCATCTGCTACCCTGAAGGATCTGGAGGTAAGAGGCTCTGGGCAGAGGTGCAGTGACCCTGCAGGCCAGCCCTCCAACCTCCTCCTCCAGGTGGGACGGGGTGCCCCTCTGCCAGCTGAGACAGTCCACACACACCCCAGCCCTAATGATTGTTCTCTCTACCTCTCCCCCCACTCCTCCTCCACCTCCTCCTCTCTGCATGCGCCTCAGAGCCCGTGCCAAGAACTAGCAGTAGTCCCAGACTCGAGGTCCGTAAAAGTCAGTCAACTGAAGAACACCATCAAATCTTTGGTAAGAGTCCACTGGGGTCCCCTGATTCCACGCTGCCAATCCTGGGCTCTAGTTTCCCCTTGGGGCCCTGAAGAAAGGGGAC-GGCGGCCCCTGGTGCCAAGGGCGAATAGGGAGCTGGGGCGCCCAGGCCTCACCTGGAGGGACCCCG------GAGCATGCAGCATGGCTCTTTTTTTGCTGCCCTGTTTGCTGACTCTCCCCTCTCCAGATGCCCCTGCTCGAGTCCTTGCTACACACGCCCTGGGATTGTTGCCTCTTG----GGGAAGTGCTAGCCTgactggttgtcagggtccc-tgtatttctgccatgactcagtccctaatttgctctttgattctggacaagccacctctcctttttggg-ctcatgtttccatgaagtagtgagtatcaaaggtctctgttagctctCGAG-TCTGAGATTTAAAGGcctcctagaatggaaacctcagggccaaaggctcctgtctgtccttttccaccctaaatcttctgtgaagaaccgtacttggcccat---acgtgctcagtaaatgtttattgaatgaatgCACTTTTCTAAATCACAAGCTGGCAGAAGGGGGG-GCCTTTCTCAAACTCCATCTCTAGAGGTTTATATTGCTGTCCTCTCAAGAGATTCCAGATTCAGACCTTCAGTTCTGTGGCTGTGGGCAAAAGCCAACAAAGACCCAAATCCTCTGTCCTTGGGAGCTTGAGGAGAGTTTACCAGTTCGAGTTCCCAC-TGGGTCTGAGAACTTTGCCTTTAAAATCCATTCCTGGTCCCTGCCTACCACTTCCTGCTCTGGGGAATAGAGTTGAGGGGGCCACCCTCCATCACCTTAATGTGACTCTCCCCACAGAAACAACAGAAGAAACAAGTGGTACATCAGCTGGAAGAAGTAACATGAT---TTCTTTGTTTGCTCGCGACATGACTGCTCGGTTTGGGGGACA-CTCAGATGTAGAGGCCCCGAGTCTCGTCTCACCCACTCCCAGCCTGGGGAAGAAGGCTCACCCCCCAGAGTCCACCCCATCCCCCACAGGGTCTCTGATAACCCGGTCCCATGGGTGGGCCTGTCCCGGGGCAGGGGCAGTGGTGGCATTCTGGGGACATGTCTCTTGCAGTACCATCTCTGCCTCTGCCTGGTTAGATCTCTGTCTTCCTCTTCCTACAGGAAAAGAAAGCAAACAACGAGAAACAGAAAGCCGAAAGGG---------------AGCTAGAGGTGAGTGGACGGTGTGCAGTTTTCTCCTGTCCTCCGGAGAATGTTTCTTTCCTTCTCTTTCAGCACTTGCTTGGCTTTTCTCCCAAAGGTTCAAATCCAGAGATTGAACATAC---------AGAAAGGGAAACTAAATACGGACCTGTACCACACGAAACGTTCTCTCAGATACTTTGAAGGTGGGAATCTGGGTACCCTGTCATCCTTCAACCTGGCACTTTGACAGGTCTTCAGGGGGAGTCCTTTGGGCCCCATCTCAA-CTCTCTCATTACAGAAGAGTCCAAGGATCTGGCCGTCCGTCTGCAACATTCATTGCAGCGTAAAGGAGAGTTAGAGCGGGCTCTCTCTGC--TGTCACCGCCACACAGAAGAAGAAGGCGGAGAGGGTGAGTCCAACCACCTGCCCCGTCCCCTGGGAGCCTGGCTTTGCAGACAGAGGAGTGAGCCTAAAGGTCCCTTCTGCAGGATGGAGTGTCCTGCCCAGAAGGCAGCATGGCCATTTCTCACTGCTTTT-TTGTATGGTTGTTAGCGGCAGCTT-GGGACTGAGTCAGCTGCTGTGGGTGAGTTGGGGGGCACTCTGGGGACAAAGCACAGGACGTAGAGCTTGGAGGCCAAGTGCCTGCCATGCCTTTAC---CTGGCTGTGGTCTTGGCCAAGTCCTCAGTGG-GTATTGGGTACTTGTACTGTGAAGGTACAGAAGAGTACCTTTAGTATGTTACCATTTCTGTAGAGAGAGGAAACGTGTGTGTGTGTGTACATATTATGATAATATACATAAAATATGTTTGCAAGTGTTCATAAAAACTCAGGAGAGAGCAACAGGGTGGCTGGGAGATACTTCCCTTCTGTACCTTCTGAGTCTGGGACTATTTGAATGTATTATCCTTTCAAAAAGTGAACAAAAGATTAATTTTCCCCTTCCTAGCTGTGCCCCCACCCCcagcaagaaaaatgggcttagagaattggatagatctgggtgtttaaatcccagctctg----cctaagtgatcttaggcaagcacttaacctcaaatactccatgttttttcatctacacaatagaggtcatcatagtaactgtctcccatggtggttgtgaggattaaatgggattgctagc-atggtatctggtgaagcactccataaaAGTTCAAACAGTGGTAATAATAACAGTAATAACAACAGCAATATTATCTGATC-TCTCTGGGCCTCTGTTAGCCAGCTATAAAT-TCGATCTCTT-----TCCCTGTCCCTTCCAACTTTACTGAGTTCTTTAAAAACCAA-ACCACGGGCTTGG s mm7.chr2 32304663 2747 + 182548267 GAGCGGCGAGGTTGAGCCATGGCGGGAAAAGAGCCATAAGGAG---TGGCACAAAGGGGGTGTGAG---------------TGAGCAGGAAAGGAGATTCTGCTAGTTGAGGGGGAAGTAG-GAGGCTGCAGGGATTAGACATTGAGGGTCACAGAGCATCTCCATGTGAGGTATTGTCTCTCCTAGTCTACATCCTACATCAACGGGGAGGGCCTCACATC---TTCCAACATGAAGGAACTGGAGGTGAGTGGCCTGGACTCATGGCCCAGCAACCCTTTACGCCAACA-GCCTATCTCCTCCTACAGG--GACCTGGGTGCCC-GCTGCCAGCTGAGACAGCCCAC-CAC-CCCCACCCCTAATGAT-GCTCTCTCTACCTTTCCCCCCATCCCTCCTCCAACTCCTCCTCTCTGCATGCGCCTCAGAACCGGTACCAAGAGCTAGCAGTAGCCCTGGACTCCAGCTATGTAACAAACAAACAACTCAGTAGCACGATAGAGGAATTGGTAAGAGTCCAGTGGGGT-CCCTGATTCT-TGCTGCCAGTCCTGGGCTTCAGTTTCCCCTTTGGGCTCTGAAGAAAGGGACTAGGGGGCCCCTGGGACCAAGGG-GAATGGAAAACCTGGG-GCTTGAGTCTCAGCTGGAGGCACCCAGAGCATAGAGCATGCAGCATGGATC-----TTGTGGCTCTCCTCTCTGCCTCCACTCTGTACTGCAGACTCATCCTGAGTCCTCGCCCTACTTGTCCTGAGCTCGGTGCCTCCAGTAGAGGGGAACACAACCCCAGTTGGTTGTCAGGACCCCATGTCCTAT-----TGGCTTAGCCCCTCATTTGCTCTTTGATTTTGGCCACACCACTCCCTGGGTTTGAGTTTCCTGTTAGCA-GATTTGGAGTGGGTCAGAGACCTCTGTCTACTCTGAAGAGGCAAGAGTTGGAAAGCTC-----ATTGACTCATCAGAAACAAGTGCTC-------TCCCATTC--------ATCTCTTG-----------GTTGTGCCCACAAGACACGCTCAG--------TTTTAATTCGACACACTCTGCCAAGTCCCAAGTTGGCAGAGGGTAGTCATCTTTCTCACACT-TGTTTCTAGAG-------TTACTCTCCTTTACTGTGAACCCAGTTGCA------CAGT--TGTGAGTGAGAGGCAGGGAGAATAAATACCC--------------TGGGAGCTTGAG--GAATTGGTTAGCTCATGGACCCATGTGGCTCTGAGCACCTT---TCTCAAATCCAT------------CCTCCCGTT---CGGTCTGGGG--TGTCATGAAAGGGGCCAGGCCTAGTCCGCTTCCTTTGACTCTTCCCACAGAAACAACAGAACCAAGACACTCTGGATCAACTGGAGAAAGTAATGTGATAGATTCTATGTTCGCTCTTTTCATGACTGATGGGGGTTGGGGAGACCTCAGAGGTGCAGGCTTCG------GTCTTGCTTTCTTCTATCCTGG---AGAAGACTCACCCCACAGGGT-------GTCCTCCATAGGATCTTTGATAACCTGACCTCAT-GGTGTGCCTGTCCTGGTGT--------CTTTGTCTTTCTGGGGGCTCGTCCCTT---GGGCCACCCCTGCTTC--CCCACTAAGAGCTGTACTTCCTTGTGCCTGCAGGAGAAGAAGGATTATCAGCAGAAGCTGGCAAAGGAGCAGGGCTCTCTCAGGGAACAGCTGCAGGTGAGAGGTC--TGGGCAGTGTCCCCGAGTTCTCTGGAGAGTGTTGCTCTCCCT-TCTCTCAGCATTGG--TGGCCTTTTCTCCAAAGGTTCACATTCAGACCATAGGCATCCTGGTGTCTGAGAAGGCAGAATTACAGACGGCCCTGGCCCACACTCAGCAAGCAGCCAGGCAGAAAGCAGGTAAG-GCCTGGGAACCCTTCCGCCTGT---ACTGATGCTGCGGCGGG--------------CCCGAGGGCTCCATCTGGACCTCTCTTGTTCCAGGAGAGTCGGAGGATCTTGCCAGCCGACTACAGTCCTCCCGACAGCGTGTGGGAGAGCTGGAGCGGACACTGTCTACCGTGTCAACGCAAC-----AGAAACAGGCAGACAGGGTAAGACAGGTCGATT-CTCTGGCCATCAGCAGCTT--CCTGGTGGAC-----AGTGAGCCTGAAGGGCTTTGCTGCATGGCCGGGTGTCT--CACAGCATACACCAC-GCCAATTCTTGCTGCTTTTGTTGTGTGGTTGGTAAAAGCAACCTGGGGGATGGGTACCCTGC--TGGGTAACTGGGG----ACTGTATAAAC-AAGCACTGAATGCAACACCTAAAGG-CAGGTGCCTGCTGTGACCCTGCTGTTTGTCTGTGGCCTTGACCAAGTGCTAAGTGATGGGATGGGTGCTCAT-CTCTGA----ACAG------ATCTTCAG-ATGGTGCCATTTGTGGAGGGAGAAGAA---TGTGCGTGTG--------------CAGTGTATGCAAATCATGTCTGAGAGGATTGGT--AAACTTGGGTGGGG-----AGGGTGACTGAATGG------CCATCTG----TTCAGAGGAGAGCAAGACTGAGAT-------------AGAAGTTAAATAAGAG---AAGTATCCTCCGCTTATCTGCAGCCCC--------caggggaaa-gggcctagagagttagaca-cccgaaatgttcaagtctcagctctgttgacctaagtgatttcaggccagcacgtag--------actttgtgtgctgtt-tctgcccagtgtggg---tgatggcaactgt---tctagatgtgtatgaagattgcatgggattattagcaacagtgcctggt-aagtgct---------------cagtg--------aacaataTTAACAACACCAGTGGTGTCCAAGAGTTCCTGGCCCAATGCTAGCCTGCTGTAAATGTCAATTTTTTAAAACTTCATAAGGCTCCC-ACCTTACTG-----TCCAGAAGCTAAGATCACAGTCTTAG a score=14066 s hg17.chr15_random 53159 425 + 784346 AAAAAAAAAGTTGTAAATTAAAAACCCTTCCCATTCCGCTTTTATTGATTTCCCCCAAAAAACTCTGTTGTATGAGCTGAACCAGAGGCAAACACTGTTTGCCAGAAGACTCACAGATCCCCGTATTAATAAGGCCTTTATCCAATGGAGTCCTCCTTCTATGAAATGTTGAGGCATTTGCTTCCTGTTCATAAATTTCTTTTTCCTTCCGTGCTTCTTTTTT------TGTATCCTGTAATTGAT-AAACAGAAATTGTTTACAAGTGATCTCATTACCAGGTGTGAAGGCACACAGGCTGGCTGAGCCCTGACCCCAGTGCCAAGCTATCCCAGCCTCTGTGGCTGCCACACCCATCCACCCACAGGCCCCCACCTGCCCTGTTGGAAACCCCAACTC---ATTTGTGCAGTTTCAAACAGTGTCTTCTTTTT s mm7.chr7 89408932 386 - 141766352 AAAACAGTAACGGTGAACTAAAA-----TACAACACAGCTAATACT-ATTTACCTAAGAAG---CTGCTGTATGAGTTGAACTAGAGGCAAGCACTGTTTGCCAGATGATTCATAGATCCCAGTATTAATTAGGTCTTTATCCAGAGGAGTCCTACTTCTATGAAATGTGGAGGCACTGGCTTCTTGTTCATCAATTTCTTTTTCCTTCTGTGCTTCTTTTTTGGCTTCTATATCCTGAAATTCATAAAACACAAACTGGTGAACAGAGACCTCATCAGTA---------GCAC-------------------------------AGCAGTCCGAGCCTCAGCTGCTGATGCAAACAGCTGACCATGCCTACCTGTATACCCTGTCAGAAACTCCACCTTCTGGTTGCTATGGTTTTAAATATATTATTCTCTTT a score=3745 s hg17.chr15_random 53636 293 + 784346 GAAGTCCCTAAAATCCTTAACCCTGCTAATGGCTCACACAAAACCCAATGTGATCGGCTCCACACACGCAGCATCCAGCTGCTCTgtaaggacaagaaggagctagaattctcacacacaaaagtcctggttcaaatgcaaatggcaaagccactttgggaaactatgaacacacactaaccccaggacctaacaaattccactccaagtgtttatccaaagggagaacatatgttcactgaagt-------acttgttcacagcacaattgtggcagctcta-----cac----ggccaaaaaccaga s mm7.chr7 89409541 273 - 141766352 cAAGACACTGAAATCTT------TGCCAGCAATTCTGACAATACTAAGTATTTTATGACTCATAC----------------------AGAGTCAGGAAAGAGCTGCAGCTCTTACATACA--------TGTTCAATTGTAAGAAACAGAGCTCATCTGGAAataaataagcacacatgcatcctagaactcagctaatgcctcccaaagtatttagtcacaggaaaaatacatgctcaaagggttagcacccactttcccccctgacgaacttaataaccctagtgaccacagtagacttaaaaccata a score=29904 s hg17.chr15_random 54241 917 + 784346 aaaaaccaaaaacaattacatgtccttcaataggaaaatgaactaacaaacagtac--tacacctataaa----atggaaaacttcccaataataaaaacgaagtcgcaatacacacaacagtgagcgaatctgaaaatcattctccaaggcaaagcaggaaagagtgcatactatacagttatattgctgcgacactcagagcaggaaaaatgaatctaatctcagggcaggggagtatcctggctgcaagtgccaaggagcacagggatctttccgggtgacgggaatggtctacatGAGGAACAGGTTACCTGTTAACTTCACTGAAACAGAC----AACATGCAGT-ATTTTATCACAATTA-----AATCATCTCAGTAATTTTTAAAATTAGCACAAAA--AAGAATTTTA-ATTTAAAA------AAATACTTGGATATAAGTTTAGTGTTTTACTGTTTTCAGTTATTCTTCAC-----ATGTGTGAGTGTGGTATTTCCGATCTCAGCCCACCACCAGGTCACG-----------------TGTGCCTCCAAGGCCATACCTGGATCTCTGCAGTAATGGCTGCGTGTAAGGCTGACTCCAACCCTCCAGCAGCCATCAAGCTGCCCACCAGAAGATCAATCACCAATCGATGACCTGGACTTATGCTCACTTCATTGCCTGAAACTGAAATAGAAAGTGTGTGC---------------------------CAATTTGAGTGAAACGCCATCC------CCTCCCAGCACCCTGACCCATGGCCTCTCCTGTTCCTTCCCCGAGCCCACCTCCGCAGGGCAGGAGAGC--AGAGTGCCCGGGCCTGCTTCTCAGCGGTGGGCAACAGCATGGACCAGCCGCTCTGCAGCATGGCCTGGGAGGCCGACTGCTCGGTGCTCAGCACGTCTGCGCTGCTTGCCAGGGTCACCACCGTCTGCTTCAGGCTGTTCAGGAAGAC---GTCCACACCTA s mm7.chr7 89409814 955 - 141766352 aacaaccaacaagtgttacaag-cattcaatgg------------------agtacttttcaacaataaaaagcatgaaaaaattctcaatcataagaacaaagtagtaacaaactgtgatgtggttaaatacaaaaaccatcaattcaggcaaaagaagaggtattac-tacc-tactgtgccatttacatgacattcagggcaga-----------caatctacaggcaggggagtagcct------aaatgcaaagggacataaggatcttccagggtgatgaaaataatctatgtgatggaagg---atctgtcaaaatcatcaaagtagacacttaaggtgggatcattttatcacaaataaaAGCAAGAGTTTTA--AATTTTAAAAATTTGTATGTAACTAAAATTTTTACATTTTGGGTTCTTTAAATTTTT---TACATTTTGGGTTCTTCAACGATTATAGTCACGATTCCTAAATAATGTCCGAGTACAGAGTTTTCAATCGCAACCATACACTAAGTAAAAGCACTCATTGACTCCTCTGTACTTCTAGGGCCATACCTGAATTTCTGCAGTAATGGCTGCATTTAAAGCTGACTCCAATCCTCCATCAGCCATCAAGCTGCCAACTAAAAGATCAATCATGAATCGACGACCTGGACTTATATTCACTTCATTGCCTGAAACTGAAAAAAGAAGGTTTTGCTCTGTTAAGTTTGCCGTTTGTTTTTAGCAATGTGGAT-AAGTGCCATCCCACATTCCTTCCCACGTTCCTGTCTGTGCCCAATTCTTCACCTAACAAAAGCTCACCTGTGCAGGGCAAGAGTGCTGAGAGTGCCCTGGCCCGCTCCTCAGCTGTGGGCAGCAGCACAGACCAGCCGCTCTGTAGTACAGCCTGGGCAGCTGACTGCACAGTGCTCAGCACTCCTGCACTGCTGGCCAGGGTCACCACGGTCTGCTTCAGGCTGTTCAGGAGCACACTGCCCAGACCTA a score=21516 s hg17.chr15_random 55357 710 + 784346 ACAAGTGGCCTCCCACACCTGTCTCATCTGACTCGCTG----CTGTTACCACCAAACACACAGACACCAGAGAAAAACACTGCCATGCACAAGCACGCT-GGTCTTGCGTAAA----------------AAATAACTAGACTCG---AGTGCCACCTAAACACAAAGTTCCATCATGACACTCACGTGCATGTCGCCCTCGGAGTGGGGTGCATCCTTCCTGCAAATGATGCTCTGGAACCTTTGCAGCAAGGGCAAAAGCGGGGCGCTGGTGCCCTGGGCGGAACGCTCATTGTCAGTCTCCTGTGCCCCGCTGTCCCACAGCTGAAGCAACAACAGGATGGCAGACAACATTTGGCTAAAGAAGAAAACATATTTA-TTCCTAGTAAAAACAGATTAACTTTTTTTTTTTTCATGGTTGATCAAAAATAAAAGCAAACAGCTAGATAGAAGTGAAGAAATACTTGGGATATGAAAGGAAACGAAAGTAAAGCCG-------------TGGTAGTTAAATCACTGAATTGACACTGAGATTTTAGCACAAGACATCGCCTTCTGCTGATAGGA--AAGACCAGTTAAGAAGCTCAAAGAG-CACATT-TACATGAAGA-TCTAGGGTCTTAAATTCATGGAATAAAAATAATTAAATGAGGAAAACTGAA---------------AGAAAAA------AAAAGAAGAACAGTTCCCAGGCTAGAAAACTGAGCATAAAACAGGAAGTGAAGAAAAGGAAA-------------------------------AGAG----------------------AGAGCCCTG s mm7.chr7 89430965 810 - 141766352 ACATGTGACCTTCCATACCTGACCCATCTCACTTACTTGTTCCTATCACCAGTAAACAAATACACCCAAAAGATCCCTACTCCCATGGAAGTACACATTCTGACCTACCTAAAGTAACCTAGTTCTTTGATATTATCAGAATAGCAAAGGGTCACCTATACACAAAACCCCAG-GTGATACTCACATGCATGTCGCTCTCTGTGTGTGGCACGTCCTTACTGCAGATGATGCTCTGAAACCTCTGCAGCAGAGGCAAAAGAGGAGCACTGGTGCCCTGGGCAGAGCGCTCATTATCTGTTTCCTGTGCCCCACTGTCCCACAGCTGAAGCAACAACAGGATGGCAGACAACATTTGGCTGAA-AAGGAAGGATATTTACTCCCTAGTAAAAATAAATTAATGTTTGCCATACAC-------ATCAAAACTAAA--CAAACAAATA-ATTCAAATAACAGAACAAT---GATAAGAAAAGATGCTAAAATTATGTCATAGAAATCATTCTTGGCAATTAAATCACAGACTTAATGCCAAGAATTTAGCAAAGACAATTATTGTCTACTAAAAAGCATAAAAATAGCTAAGGCACTGAAGTAGTTACTTTGTACATAAAACTTTTAGAATCTTAAGTTAACAAATTAAGAATATCTATTTGAGAAAAACTAAATAAACAGTTACTTAGGGGAAAACATGTTAAAAGAAGAGCTCTTAGATGACTAGATAAATTAGCCTAAA--AAGAAATAAAGACAGCAAAACAGACTATCACAAGAATAAACACAGGGGGCCAGAGATGTCCCCTTGCCTGGCCCCACAGGGCCCAG a score=970 s hg17.chr15_random 56067 15 + 784346 GGACATGGTTCTCTG s mm7.chr7 89431879 15 - 141766352 GGGCATAGTACTCTG a score=9520 s hg17.chr15_random 56082 496 + 784346 TAGAGCACCACACCTGCTGCAGTCAC--ACGATTCAGTGAAACGCACACAATGCAACAGGTATTT-GGATACAGAGGCGCTTCCCCAAAGCATTCCCGGTCTGCACCAGCCCTCACCTCAGCATGCCTCTCTGCACAGCCAGCTCCAGCAGGATGGCCAGGGCCAAGTGCTGGTCCTGTAGGGGGA-TGATTCTGGCCCTTTAGTGCCTGGTATTCCGTGAACATCCCTGAAATGAAAACAGTGGATGCAGGA--ACGAAGCGACCTCCAGAAAGACAGCATGCTTACAATCACAGTAACACATTTGCTACATGCTCCCTCCCA-------------------------------------------------------AGGAAGGATGTA-----------------------------------------------------TCTTTAATATTTAGAATCAAGCTTC---------------------TGAGACT-TGCTACTCAAATTTATTCACAGATTTTTAAAGTATACAATTAATTTACAGAAATGTATTTTATTTAAAGTATTCATTCAGATACTATATTACAGTAGATGACATACTCCAAGTGTGTGAAGCATAAAATAATTT s mm7.chr7 89432728 594 - 141766352 CAGAACAC--AATTTGCTCTAGCCACAAACAATTAAGTGGAATTC-CACAACACAGCAGGTTTTTCAGATACACAACTATCTCCTGAGG-------TGATCTGAGCCATAACTCACCTAAGCGTGCCTCTCTGGACAGCCAACTCCAGTAGAATGGCCAAAGCCAAGTGCTGATCCTGTAGAGGAACTCCTCCTGGCCCCTTGGTCCCTGGTGTTCCATGAACATCTCTGAAATGAGAGCA------ACAGGAAGACTAGGCAACATCAGAGAAAGCAGAAATGTTTAAATCATACCAACCCCCTAGTAATATTTACTTTCCCATATAAAGAGGCAAGCACTGCTGGAACATGCAGACAGCACTGCATACACACAGCAGAGGGAGAATGGAAGGGAGGAAAGATAAGGGGAAGAGCGAGTGAATGATCTTTTTGGGGGGTGCTTCCTTCAGTGTGTAGGATTGAACCTTAAGCCATGGACACACTGGGTGTGAGGCTCTATTACTGAGCTCTATTTCCACCTACTAAACATGCAGTTTTAA----------------------AAAGCATGAATAGAGATATTATATTACACCAAAAGAGACATCCTATGTTTCTAAAACATAAAATCATTT a score=3513 s hg17.chr15_random 56596 157 + 784346 TGAGTAGGAGAATATCTAGCTA-----TCTTTTCCAGTTTCAATGACGTGTAAGACTATACCAGTATCAACCTTCTCCCACAGAATTAGAGAACCAATTTCTAAAACCACTTGAGGATCTGGAGGCAAAATGTCTACACTAATTTCTATCTCTGATCAAAGA s mm7.chr7 89433597 140 - 141766352 TGGGTAGGTGGATGTGTGTTTATGAATTTTTTTCCAATTTGAACAAAATATA-------------GTCAAC--TTCCATATAAAGTTAGAAAAA----TTTTAAAGTCACCAGAGGATCTAAAGGCACA---TCTATGCAAATTTATATTTCAAATCAAAAA a score=10505 s hg17.chr15_random 56754 178 + 784346 TACCTGGTTGCTTACTCCATACCCAGCTCTCCAGAATTGACTTGGCCCCATATACAGGTGCAGGAGT------TTCATCTTTTTTCTCTCTGTCATCCAGATCTTCTTTCTTTGTTCCACTTGG---TTCAACACTATCATCTGCAGAATTAAAATTTTTTTAATCTGTAACCGCTTTTCAGAATGC s mm7.chr7 89451426 187 - 141766352 TACCTGGCTGCCTGCCCCACACCCAGCTTTCCAGGATTGACTTGGCTCTATACACAGGTGCAGGTGTCTCTTCTTCTTCCTTCTTCTCTTTGTCATTAAGATCTTCTTTCTTGGTTCCACTCTGAGCATCGACACCATCATCTGAAGAATTAAAAATGTTCAAGTCCATAATTGTTTTTCAAAATGC a score=1821 s hg17.chr15_random 56932 110 + 784346 CATACCAT---------------CTGTCAGTCTCTGCAAATGTCCCTCCCCGA------AAAGTTACAACACACATCATTAACTGAACGTTTGACAACTTAAAAATAAAATACATCAATCGTACCTGT-AAC s mm7.chr7 89451765 128 - 141766352 CACATCTTAGAGAGAATCAGATCTTATCAATCTCTACAAATGCTCTTCCCAAACATGCGAGAGCTACCGCACACGTCAGTCACTCAATGTTTCAGGTTTTTA----AAGACACATGAATTAAAACTATAAAA a score=633 s hg17.chr15_random 57042 34 + 784346 AGATCCAGTATAATTT------TCATAAAGCAATATATCg s mm7.chr7 89452053 40 - 141766352 aGATTCAGCATGGTTTATTTAGTAATTAATGAATACAATA a score=6258 s hg17.chr15_random 57386 272 + 784346 ACCAATATATCAAATTATTTAAAGCATG-------TCTTCCAAAAT------GATATTTCATTAGCTTCCTAGTAGATTTCACAACAGAGAAACTTAGTCTTTGATATTTACCTACTTCAGTTTCACACCAATTGCTTTTATCCAGTGAGTCCCAA-TGCATGTGCACCCATGGGAAAAGGGAGGGTGTAGAACAGGAGTATGATTCAAAAATCTTTTAACTCTTTACAAGGCCCTACTCCACTGCCAACTGGGAAGCAGTGCTATGCAGGGGCACTGTGACTGAT s mm7.chr7 89452093 274 - 141766352 CACGAGATTTTTAATTTTTTAACACATGAAGGGTTTCCttttaaatattttaaatattttatCTATGTTCTACTAGATTTCACAACTAAGAAAGTTCACCTTCAATGTTTATCTATTTGTACTCTCCACTAAGTGCTTTAATTCAGTGACTCAAAATTGCTGAATCACCAAAGTGAGAATTAAGGAGACAAAACTAGAAT----------CATTTTTAAA--CCGTACAATGTTCTTCTCTTCTGCCAGCTGAGAACCACTGTTACACGAGGCCACTATCACTGAG a score=6525 s hg17.chr15_random 57658 212 + 784346 AGCATAATTCAAGAGCACTGGGACACAAAGGAAAAGCTGAGAAAAATGACTTTAGGCCACTGACAATGTCAAGTTTCAGTCAAAAACAACTGTCATAAAACTCCTTACACAGTAAGCGAAGAGAAGAGAGAACCTTAACCTTGAAGTGTAAACACACTCCATCACAGAAGGCTGTGACTAAATGTCTAAACAACATAATTAGAAAAATGTAT s mm7.chr7 89452514 188 - 141766352 AGTATAATTCAGGAGCACTGAG--TCAAAAGAAAAATTGAAAACTACTACCTCGGGCCACTAG------AAAGTCTCAGACAGTAATAAGTACCTTGAAACCCCTTACATAGT-TTTGAAGAGAGAATGGAAA---AACTCTGAAATGTCAACAAGTTCAGTCACAGAAGGCTCTAACTAAA------------ATAATCATATAAATACAT a score=6640 s hg17.chr15_random 61273 202 + 784346 AAGAAAAAAGAAAAAAAGGTT---------GCTGACTCCTGCCATGGAAGGCACTATCATATGGACACTCTTAGCCTCAGCATCCGGAGGTCCAGAAAGCGAAAATTTCAAGTCAGAGAGAATTCTATATATACCATTTATTTGGAACCTTCAGCCCTTAAGATCCCAACATCATGACTTCAGTTTCAACACAATTATCCTTAGACCTTGT s mm7.chrX 147787754 201 - 164906252 AATGAAAGAGGAAGAGTGGTCCCTATAATGGCTGCCTCTTG-----GAAGGCAGTTTCCAGTGGGAACT--TATCCTCCACACTGGGAACTGCAGAACAGAGATATTTCAAGTCAGATAGAATTC---ATGAACAGTTTCTTCATAATTTTCAGTCCTCAAAATCCCAACTTCATAACCTCAGTTTCAACATAACTGCTCTTAGTCTTCAT a score=844 s hg17.chr15_random 61486 195 + 784346 ACACAAAACAAATAGCTCGACTGAACTAACTCACCTCTCCAGAAACACAAACACAAGACCTCATAAAGTCAGTGAGTTTCTACAGGCCATAATTACTGCAACTTACTTCTCCAATTTTCCCCTCCACAGTT------------AACTCAACAGC----------------------------------------------------------------------------------TC-------------------AAAAACGATCAGTAACAAACAACAGTCACCATGATATGGTTAGGAGTGTGG s mm7.chr7 89472172 279 - 141766352 ATATAAAACCAACAGCTCATCTAAACTG--TCACCTCTCCGGGAGAACAAATACAAAATCGCAGAAA---------------------ATGCTAACTACATATCACTTTCCTGCTT---CCCTGCATAGTATCAGGACATACAAAATCAATAGCAAAAATATCAGGAcatgcctttcatcccaggactcaggatgcagaggccagccaggcacagtgagttAACAGGGAGACCCTTTCTAAAAATAAGAGGGGGGAAAAAAAGAAAAAGAAACAAACAACAGTCAA---GTCTTGATTAAGAATGTTG a score=32118 s hg17.chr15_random 61692 1318 + 784346 ACCAGTAATAATAAAT----AGGAAAAAAATT--------TTGCCTACTAATAGATCTCAAGTTTCGTGCACTTACAAGAAACT--AATTAAAAGGCAGCCGCGCACGATCTACAAAAACAGCCATAAAGACTGTTACATTTTAAGTTACAGGAAATAAACCTGCTCCTCTAATTCAGCAAGATACAACTGACTTCCCCTTACATACCCTAAAAAAAAGCTTTACACGAGAAATTTAAACATGGAAGCAGAAACACACCAAGAAAA-----AGACATGTCAAACCCCACCTGTATATCTGTTTTCAACCATTTGGAGTCGAGGCGAGCCCGGGCAGCCAAACACAAAGATTCAGAGGGCATCTTTTCTCCAGCTTCCTCCCAGGTCTCAGGCCTGCAAGT-AAACACATACGTTGAAGACCTAACGCTTTTTAATAGT-TTACAAAGACACTCCCGAAAGGTTCAATGCAgaaaggaaaaaagagagagagaacagaaaggggggagagaagagctggtggagggga-gagaaggggagagagggaaacagggaagagatggagggagagggaggtggggaagggaaagCCTCCTTCCAAGGTAGGCAGGGTGTGCCGAGTTTCTGCACCACGCTGACGAGACCTTGAGAATGGACGGTCACAGGAAGCCAAGTCACAATGTCATCCCCCTGCCCTCAAATCCAAGAAGTACACACATA-------------ACAGGGAGCCCATCGTTTTAACGACAAATGACAGCAGCATGAATCTGCCGCTTTACCCCACAGCAG---GGC-GCGTGCGTGAAACAAATTACTCAAAAGGATCGCCTGCAGAAAAACCCACAGCCACCACCACTTAAGAGATGGAGAGAGGCCCGAGGCTGCCCCGCGGGTGGTCCGCGCAggccccggtgcggccgcgcccacgcccgcctcccgggctcggccgcccgccagccccacgcccgtaccgcccccgccaccggccg-cccAGGTGCCCCAGGCCAGGACCTGACGCGCAGGGCCGG-------GCCGCCTCGCCCCGCCGGCGTGCGGACGCAGC-CTCC---CAAGAGCCGCTGGCTCAGCCGGCGCCCGCGATCCCGGCGCCTCTCGCGGCCCGAGGGGCGGGCCGACGCGGGACTGCCGCCCCCCGCGTACGGCCAATCGCAACGAGGCTGCTCCGTGGGCGCAGCCAATGGGGAAGAGGAGCCCTTCGCCGCTCCTCCCGACTCTCCCGCTTCCAGCAATCCCGCTTATCTTCCTACTTGGAGCGCCCTGGCTGCGGCCAAGGCCAACAGCGGGCGCCGGAAGGCGGGATTTCCGCCGCACGCACGC--ACTCCCGCACTCCCA s mm7.chr7 89472645 1266 - 141766352 aCAAATAAAAATAAGCCTCCAGAATAAAAATACTGAAAAATTGCATA--ACTGGATCTCAAGTTTCTTGCACTTACAACTAACTTCAATTAAGCCACAACCACATAGCATCT-CTTCAACAGTCATAATAAATGTCACATTGTAAATTATAAGAAATAATCTT-----CCTAA---GACAAGATCTAATTGCCATTCACTCACACATTCT---------CCTCAAGCAAACATTTTT--TATAGAGACAGGAACACACAAAGAAAAGAGAAAACCATGTTCA-CCCCACCTGGATATCTGTTTTCAACCATTTGGAGTCAAGGCGAGACTGGGCAGCCAAACAGAAAGACTCAGAAGGCATGTTTCCTCCGGGT--------GG--TCAGACCTGCAAGTCAAACACAAACGCTGGAGCCCTCGAGCTTCTTTAAACTGCTATTTACACCATCCTG--CTGTTTAACGCGGC-----------CGAGACAGAACATAAAACAGGGA-AGGAGAGCTGGGGGAGGGGACGAGAGGATGAGGGATGAGA----GGGAAAGCTGGCCCCAGAACGGGAGAAGGGAGGGAAATACCACTTCCAATAGAGGTAGAGT-CGCTGGGATTTCCCAATACGCCGGCCGGACCTACAG------TGGTCACCGGCGACCACTGCACAATGTCATCCCACT-CCTTTAAATCCAA-AGGGACACACACAGACACACGTCAGGAAAAAAAACTCACTATCGCAACGACAAATGACACCAGTGTGCATCAGCCGCTATA-CCTACAGCAGTCCGGCGGAGTGTGGTAAATAAA-----CAAAAGTCATGTCTGCAGATAAATCTACAACAATCGCC---TAAATACTAAAAAGACAGCCGTGACTGCGCGGCCTCCGAGGCGCACAGGCCCTGGTTCCTCCGCGCCAACGCCCGCCTTCCG---CCCGCCGCTCTCCGGGCCC-CGCTC-TCCCGGACCTGGCGCCGCCCGTCTTCGGCCCCTCCGCCCTCCTTCGGCCCAGCTCGGCCAGCCCTGGCGCCGCCT-GCTCCGCCAGCCGGCTGAGGGAACACTCCCTGCAGGAGCCG--------GCCGGCGCTCGCGATCCAGTC------TGCGGCCCGAAGCGCACGCTGACGCATGGCT----------GCGCCCGCCCAATAGC-GCAAGGGTGAGAGACGGCTTCAGCCAATGGACGAGCAGCGTCGCACGCCCCTCCCCCAA---CTTCCGCTTCCTTCAGCACGACTCAGCTTCCTTCTTGAGACTCACCCGCT-CAGCGAGAGCCAACCGCAGACGCCGGGAGGTGGGACTTGTG-CGCACGCACGCTGGCTTGCCCAGTCCCA a score=18080 s hg17.chr15_random 71484 671 + 784346 GCGGCCTCTCCCCT----CTCTTAGGG---TGGGTGGGGACAGTGGTTGCATGGGCAGCTTTCCTTGTGAGC--CAAAGATCCCTCTGGACACATGAT-GCCTGGCCACGCCCCCTTTCCCTTTCATCTTTCTCATTAACCAATGGGCTTGGAGCATTAAGGCCACGCCCCTATTCTG--CCTTCTACTGCATCCCTGGTTACGCCTCCTCTGGCTCAGTCGCACAGCTACCTGGTAGGTGACTGGAGGTGTTGATCAGTGCTTGGTGGGATTTTGCTGATGTGGCCCCAAGCCCGCCTCCCTCCCCACCCTGCGATGGCAGAAGAAACTCGACAAAGTAAATTGGCAGCAGCCAAGAGAAAGGTAAAAACACACCAGGTCACGGACCCCCAACCCAGCCATAGATCCTCTCCAACGACAAGACTGCTG-CCAGAGTCCATACCACTCCCGAGGTTCACCGGACTGGGACCCCCACACCGGTGCCTCTGGGCTACCCCCACCAAAGTTTTGCCAGTCAGCCCCACCCCTTCAGCAAGCAGCCCAGTCTCTGCCCTCACCAATCACCCCAGGGTGACTTTGGGCAGGTGAATCCTGGGGCTCCCCGCTCCTTTACTGGGCCCTCATCTCCTGCCACCCCAAGCTTGACCTCCCAGGGCTTTTTGGGCTCACATCTCCAAGGACCT s mm7.chr2 32295350 627 + 182548267 GCGGTTCCGCCCCTGCTTCCCATAGGCCGCTGTGAGGGGTCA-TGGCTGCGCGCGCAGCTCTCGTCGTTAACTCCACCCGTCGCTCAGGCCTCGCGACCGCGTGGCCACGCCTCCCTGTC-GTTCATCGTTCTCATCAGCCAATGGGCTTGGAGAAGGTAGGTCACGCTGGGTTTCCGAGCGTCCAAGGGGCGCTCTGCACCCGCCTTCTCTGGCCC--TTGTAGAGAAGCC--GTAGCTTCCGGAAGCAGTTTCGCGGTGGCTGCCGGGATCGTGGTGATGTGGCCCCCCCGCTTCCCCCCTCCCCGCCCCGGGATGTCGGAAGAAACCAGGCAGAGCAAATTGGCTGCGGCCAAGAAAAAGGT-AAAGCGCTCCGGGTCGCGGCCCCTTGACCCCACCCGAGCTC--CTCCAACGGCAGGACCCATGACCAGAGTCCGAGTCTTTCCCGAGACACACGGGTAGAAGAACCCCTCAGCG----CCCTGGGCT-CCCCCAGTGAAGTCTTCTCAGCCAGCCCCGCCCCCTCAGCAA----CCCAGCCCCCGCCCTC-TCAGTCGCCCCTAGGTGACTTTGGTCAG--TGACACAGGGTCT-------------CTTAGCCCCCGGCTCCGGACGCTCCAATCCAGACCTCCCAGGGC-----------------------ACCT a score=8262 s hg17.chr15_random 72296 435 + 784346 GTCTCCAAGGACCTGGGTCCCAGCTCTGTTTTTCCCTCCCCTATCATGGAGCGGTGACTCGGACATCATGCTGATGTGGTCCCTCCCCCTCACCAGGAAGAGTGGAATGTAGTGATGTCACGGTCCATCC-AGTAACTGTCATTACTG---CGAGACTGGCCTTTGATCTTATGACCCAGTCCCCTAAGCATTGCCACCCCATTTCTGGTTCCTCTTGTCACAGCACAAATTTCCAGCTGGAAGGGGAATGGAGATTGGGACCTAGGAGCAAGAGGTTTCAGGCTGCCTCACTCCCTTAACATAAACATTGACAGCGGGAAAAGCCTACACTTCCCCTGTGAGCTCAAAACATTGACAGTACCTCTGGATGGCAACTGGAGAATGGGTTTGACTTGGTTTGGTTTTCTCCCAGGCTTCTACTTTCCAGAGAGATTTTAA s mm7.chr2 32295977 348 + 182548267 GTCTCCAAGGTCCTCGGTCCTGGCCCTGT----------------------AGGCGACTCGGGCGT--TGGTAGTATG---------------------GAGTGGAATGTAGTTACGTCACAGTCCCCCCTCGAAACTGTCATTACTACTCCGAGTCTGG-TTTGGATTGCTCCACCTGCTCACCTAA-TGTTGTTGCCCCTTTTCCCGTTTCTCTGGT-GGAGAACCCATTTCCACCTGGAAGGGAGCCCAAGTGTGGAATCTAGTGCGGAGACGCTGTAGGCGCCCGCATTCCCTTAAC-TTAGCATTAG-------------------------TGTGAG--CACAACACTGTCAGCACCCCTTGCTGACA--TGGA--------TTGGTTTGGTTTGGATTT-----GGTTGTCTGCTCTCTAGAGAGACTGTAA a score=1066 s hg17.chr15_random 72732 113 + 784346 AAATTTTTTGTGAGTTCTCCACCTCACATTCTAATTCTCCATGGTTCTGGGACCAGACTGCCCTTCAGTCAGTGGTCTGTGAAGTGAGATTTGCTCATCTTCTGTGGAATAGA s mm7.chr2 38980277 109 + 182548267 AGTCTTTTTCAGAATCTTGAACTTTGCACTTGTACTCCCTACTACTTGGGAAGCAGAGTGTCCC-AAGTCAG-GCTCCCTGGGATGAA--CTGCATCTATAATGTGGGGTAGT a score=5764 s hg17.chr15_random 72845 314 + 784346 TCTTGGGAAACTGAACTTGACAGCTTGAATCTTCCTC---ATATTATGTAAACCTGGGGTACTTTGAGTGCCACAGGATACATATGGGACATCTTTC-TGAAGCATCAGTTTCCATTGATTCTCTTGAGATCAAGAGAAAAAACATTAATGTACTTAGGGATGACAGTCACATAGGTTTCTAACAGTATACCAGACTTCTCTCTGAAATGAGGCTTGGGTTGTCCTCTTTCTGATAAATTCCCAGATTTAACAGAAAGGCTG---------------CCTTCTGCCATGAGGACACATTGATATAAAAGTTTGAGAGGTAC--AGGTGCACTTCT s mm7.chr2 32296365 307 + 182548267 TCTTGGGGAACTGAACTT---AACTTAAAATTCAGCCAGAATGTCTTTTCCAACTGGGGTG--GTGAGAAGCACGGGATGCGGGTGAGGCATCTCACGGGAAACATCACTTTCCCATGCTTCTTTTGAG----AGAAAAAAACCATAAAAGTCT---GGTTTGGCATTTTCATAGATTTGTAG---------AGACTTCTCTCTGCGATGA--CAAGGGCTGTGCCCTTTCTG-----TTCCCATGTTCACTAAAGCCGTGGCTTCACGGTTTCTGCCCTTCTGTCATGTTGTAAACTTAGGAAGCAGGTTTAGGAAGTACTGCGGTGTACCTTT a score=3813 s hg17.chr15_random 73206 134 + 784346 CAGTTCCTGCCTACTTAATGTTTACTTTTCTAGCTCTGCCTCTGG-TTTTGGTCCCTGGCAGCTGATGATTCTTGGTAAAACCCCAGAGTTTGGAGTCAGAAGACTGAGTTTCAAAGTTCGTCTGTCGCCTTTTT s mm7.chr2 32298571 122 + 182548267 CAATTCCTGCCAACTAAATGTTTACTCTCTGGTCTCTACCTTTAGATTTTTCCCTTTGGGAGCTGC------------AAACCCCAGAGCAGGGCATCAGAAGATTTGAGTTTAGATTCCGTGT-TTGCCTCTGT a score=2472 s hg17.chr15_random 73345 112 + 784346 CTTCTTTTTTTTTCTAGCCATGATATCAATCTCTTTGAGTCACTAAATGATTGTGACAACACCTTGTACAGTTGTTGGTATCATTAAATCAGATG---GTGTATAAGAGTATTTT s mm7.chr2 32298788 109 + 182548267 AATTACTACCTTTTTAGCCATGCCAT-----TTCTTCTGCCATTAAGAGGTCATTATTATATCTTGTAGACTCGT-GGTACCATTACATGAGACTTACGTACATAAGAGTATTTT a score=13506 s hg17.chr15_random 73472 551 + 784346 GAGGATGTGGCTGCAGGGGCTGATAGTTCTCATGAGTATTACTGCTCTTGTTTCTGACAGTTAAAAGAATATTGGCAGAGAAACAGCCCTGGTGTTCCAGCAGGAGCCAAGAGGAACAGGAAAAC---AAATGGCAGCATCCATGAGACAGCCACTTCTGGTGGTTGCCACTCACCTGGAGATGTGAGTCTTGGCTGACTAGGTTCCTGGGGACAGGGGAC-----------------------------CCAAGGGGcactagagggtaattgttaagatg-------tggatggactgttg-----------ggta---------------------------cctg-----------------tgaagaat----tctgggtttgaatcctgcctctttgtctgctagggatatga----attagggcaagttgctagacctcatcaggcctctcttttcacatctgtataatagaggtggtattgtttcacttccatttgtgaagtttaaatgagatTTGTTATTGTTGTTTTTATGTTAAT--CCCTAGTACATGGCCTGCTGTAAACACCCAGAACACCCAGGATATGGTCATTGCTGTTCGATTTTCCTCATCCCCAGTCTCAAGGGGAAGCCAGGACAATGAGAACA s mm7.chr2 32299347 635 + 182548267 GAGGCTGTGAGTGT-GAGGCAGATGGCTCTCATT--TCTCTCTGTTCTCCTTTCC-ACAGCTGAGAGAGTATCAGCAGAAGAACAGCCCGGGTGTTCCTGCAGGAGCAAAGAAGAAGAAAAAGATTAAAAATGGCCATAGCCCAGAGAGACCCACTGCCAGTGACTGTCAGTCACCAGAGAATGTGAGTCTTGGCCAAC-AGAGTCCTGTGGAATGGGGGCAGGTGGGAAGAAGCGGGGAGGGCTGTGGTTCAAGTGGAAATGTCAGGTGCTGGTTAAAAAGTCTGGCTTTGAGGGCTTGTTGCCTAGTTCAATGGTAATGAACTAGGGCTCATCTCACAATGGCCCTGGGTTTTATCTCAGCACAGGAAAAATTaaatctgagtctgaattctatctctccatcagttggcaatatgataactttagggcaagttggttaaactctctgagcctctttttacatagctgtacaatagcggtaatatt-tttaatgtgtatctataaagattaagtgaagtTTATTGCGGTTGTTTTTCTATTAATTCCCCTAGTGGAGGGTCTGCTGTGGA-------GTTAACAGTGAGCTAATAGGTACCGCTTGATTTTCTT-------GGTTTGGGGTAGAAATCAGACCAGAGGGAACA a score=33111 s hg17.chr15_random 74049 919 + 784346 GGGCCGCAGGGTGCTGTGGTGGGGAGATAAGAACCATGAGAGAAGTTGGCACAAAGGAGTTATGGGACAAAGGGTCCAAGATAGGCAGAAAAGAAAATTGTGCCAGTTGATGGGGAAGAAAAGAAGTCAGAGGGCTTAGATACTGAGTGGGACAGAACATCTTCATGTGCACTCTCATCTCTTGTAGTCAGCAACAGGTATCCACGGGGAGAGCCCTACATCATCTGCTACCCTGAAGGATCTGGAGGTAAGAGGCTCTGGGCAGAGGTGCAGTGACCCTGCAGGGCAGCCCTCCAACCTCCTCCTCCAGGTGGGACGGGGTGCCCCTCTGCCAGCTGAGACAGTCCACACACACCCCAGCCCTAATGATTGCTCTCTCTACCTCTCCCCCCACTCCTCCTCCACCTCCTCCTCTCTGCATGCGCCTCAGAGCCCGTGCCAAGAACTAGCAGTAGTCCCAGACTCGAGGTCCGTAAAAGTCAGTCAACTGAAGAACACCATCAAATCTTTGGTAAGAGTCCACTGGGGTCCCCTGATTCCACGCTGCCAATCCTGGGCTCTAGTTTCCCCTTGGGGCCCTGAAGAAAGGGGAC-GGCGGCCCCTGGTGCCAAGGGCGAATAGGGAGCTGGGGCGCCCAGGCCTCACCTGGAGGGACCCCG------GAGCATGCAGCATGGCTCTTTTTTTGCTGCCCTGTTTGCTGACTCTCCCCTCTCCAGACGCCCCTGCTCGAGTCCTTGCTACACACGCCCTGGGATTGTTGCCTCTTG----GGGAAGTGCTAGCCTgactggttgtcaggggccc-tgtatttctgccatgactcagtccctaatttgctctttgattctggacaagccacctctcctttttgggctcatgtttcc----agaggaagtagtgagtatcaaaggtctctgttagctct s mm7.chr2 32304663 886 + 182548267 GAGCGGCGAGGTTGAGCCATGGCGGGAAAAGAGCCATAAGGAG---TGGCACAAAGGGGGTGTGAG---------------TGAGCAGGAAAGGAGATTCTGCTAGTTGAGGGGGAAGTAG-GAGGCTGCAGGGATTAGACATTGAGGGTCACAGAGCATCTCCATGTGAGGTATTGTCTCTCCTAGTCTACATCCTACATCAACGGGGAGGGCCTCACATC---TTCCAACATGAAGGAACTGGAGGTGAGTGGCCTGGACTCATGGCCCAGCAACCCTTTACGCCAACA-GCCTATCTCCTCCTACAGG--GACCTGGGTGCCC-GCTGCCAGCTGAGACAGCCCAC-CAC-CCCCACCCCTAATGAT-GCTCTCTCTACCTTTCCCCCCATCCCTCCTCCAACTCCTCCTCTCTGCATGCGCCTCAGAACCGGTACCAAGAGCTAGCAGTAGCCCTGGACTCCAGCTATGTAACAAACAAACAACTCAGTAGCACGATAGAGGAATTGGTAAGAGTCCAGTGGGGT-CCCTGATTCT-TGCTGCCAGTCCTGGGCTTCAGTTTCCCCTTTGGGCTCTGAAGAAAGGGACTAGGGGGCCCCTGGGACCAAGGG-GAATGGAAAACCTGGG-GCTTGAGTCTCAGCTGGAGGCACCCAGAGCATAGAGCATGCAGCATGGATC-----TTGTGGCTCTCCTCTCTGCCTCCACTCTGTACTGCAGACTCATCCTGAGTCCTCGCCCTACTTGTCCTGAGCTCGGTGCCTCCAGTAGAGGGGAACACAACCCCAGTTGGTTGTCAGGACCCCATGTCCTAT-----TGGCTTAGCCCCTCATTTGCTCTTTGATTTTGGCCACACCACTCC------CTGGGTTTGAGTTTCCTGTTAGCAGATTTGGAGTGGGTCAGAGACCTCTGTCTACTCT a score=33802 s hg17.chr15_random 75094 1964 + 784346 ttgaatgaatgCACTTTTCTAAATCACAAGCTGGCAGAAGGGGGG-GCCTTTCTCAAACTCCATCTCTAGAGGTTTATATTGCTGTCCTCTCAAGAGATTCCAGATTCAGACCTTGAGTTCTGTGGCTGTGGGCAAAAGCCAACAAAGACCCAAATCCTCTGTCCTTGGGAGCTTGAGGAGAGTTTACCAGTTCGAGTTCCCAC-TGGGTCTGAGAACTTTGCCTTTAAAATCCATTCCTGGTCCCTGCCTACCACTTCCTGCTCTGGGGAATAGAGTTGAGGGGGCCACCCTCCATCACCTTAATGTGACTCTCCCCACAGAAACAACAGAAGAAACAAGTGGAACATCAGCTGGAAGAAGTAACATGAT---TTCTTTGTTTGCTCGCGACATGACTGCTCGGTTTGGGGGACA-CTCAGATGTAGAGGCCCCGAGTCTCGTCTCACCCACTCCCAGCCTGGGGAAGAAGGCTCACCCCCCAGAGTCCACCCCATCCCCCACAGGGTCTCTGATAACCCGGTCCCATGGGTGGGCCTGTCCCGGGGCAGGGGCAGTGGTGGCATTCTGGGGACATGTCTCTTGCAGTACCATCTCTGCCTCTGCCTGGTTAGATCTCTGTCTTCCTCTTCCTACAGGAAAAGAAAGCAAACAACGAGAAACAGAAAGCCGAAAGGG---------------AGCTAGAGGTGAGTGGACGGTGTGCAGTTTCCTCCTGTCCTCCGGAGAATGTTTCTTTCCTTCTCTTTCAGCACTTGCTTGGCTTTTCTCCCAAAGGTTCAAATCCAGAGATTGAACATAC---------AGAAAGGGAAACTAAATACGGACCTGTACCACACGAAACGTTCTCTCAGATACTTTGAAGGTGGGAATCTGGGTACCCTGTCATCCTTCAACCTGGAACTTTGACAGGTCTTCAGGGGGAGTCCTTTGGGCCCCATCTCAA-CTCTCTCATTACAGAAGAGTCCAAGGATCTGGCCGTCCGTCTGCAACATTCATTGCAGCGTAAAGGAGAGTTAGAGCGGGCTCTCTCTGC--TGTCACCGCCACACAGAAGAAGAAGGCGGAGAGGGTGAGTCCAACCACCTGCCCCGTCCCCTGGGAGCCTGGCTTCGCAGACAGAGGAGTGAGCCTAAAGGTCCCTTCTGCAGGATGGAGTGTCCTGCCCAGAAGGCAGCATGGCCATTTCTCACTGCTTTT-TTGTATGGTTGTTAGCGGCAGCTT-GGGACTGAGTCAGCTGCTGTGGGTGAGTTGGGGGGCACTCTGGGGAGAGAGCACAGGACGTAGAGCTTGGAGGCCAAGTGCCTGCCATGCCTTTAC---CTGGCTGTGGTCTTGGCCAAGTCCTCAGTGG-GTATTGGGTACTTGTACTGTGAAGGTACAGAAGAGTACCTTTAGTATGTTACCATTTCTGTAGAGAGAGGAAACGTGTGTGTGTGTGTACATATTATGATAATATACATAAAATATGTTTGCAAGTGTTCATAAAAACTCAGGAGAGAGCAACAGGGTGGCTGGGAGATACTTCCCTTCTGTACCTTCTGAGTCTGGGACTATGTGAATGTATTATCCTTTCAAAAAGTGAACAAAAGATTAATTTTCCCCTTCCTAGCTGTGCCCCCACCCCcagcaagaaaaatgggcttagagaattggatagatctgggtgtttaaatcccagctctg----cctaagtgatcttaggcaagcacttaacctcaaatactccatgttttttcatctacacaatagaggtcatcatagtaactgtctcccatggtggttgcgaggattaaatgggattgctagc-atggtatctggtgaagcactccataaaAGTTCAAACAGTGGTAATAATAACAGTAATAACAATAGCAATATTATCTGATC-TCTCTGGGCCTCTGTTAGCCAGCTATAAAT-TCGATCTCTT-----TCCCTGTCCCTTCCAACTTTACTGAGTTCTTTAAAAACCAA-ACCACGGGCTTGG s mm7.chr2 32305640 1770 + 182548267 TTAATTCGACACACTCTGCCAAGTCCCAAGTTGGCAGAGGGTAGTCATCTTTCTCACACT-TGTTTCTAGAG-------TTACTCTCCTTTACTGTGAACCCAGTTGCACA--------------GTTGTGAGTGAGAGGCAGGGAGAA--TAAATA------CCCTGGGAGCTTGAG--GAATTGGTTAGCTCATGGACCCATGTGGCTCTGAGCACCTT---TCTCAAATCCAT------------CCTCCCGTT---CGGTCTGGGG--TGTCATGAAAGGGGCCAGGCCTAGTCCGCTTCCTTTGACTCTTCCCACAGAAACAACAGAACCAAGACACTCTGGATCAACTGGAGAAAGTAATGTGATAGATTCTATGTTCGCTCTTTTCATGACTGATGGGGGTTGGGGAGACCTCAGAGGTGCAGGCTTCG------GTCTTGCTTTCTTCTATCCTGG---AGAAGACTCACCCCACAGGGT-------GTCCTCCATAGGATCTTTGATAACCTGACCTCAT-GGTGTGCCTGTCCTGGTGT--------CTTTGTCTTTCTGGGGGCTCGTCCCTT---GGGCCACCCCTGCTTC--CCCACTAAGAGCTGTACTTCCTTGTGCCTGCAGGAGAAGAAGGATTATCAGCAGAAGCTGGCAAAGGAGCAGGGCTCTCTCAGGGAACAGCTGCAGGTGAGAGGTC--TGGGCAGTGTCCCCGAGTTCTCTGGAGAGTGTTGCTCTCCCT-TCTCTCAGCATTGG--TGGCCTTTTCTCCAAAGGTTCACATTCAGACCATAGGCATCCTGGTGTCTGAGAAGGCAGAATTACAGACGGCCCTGGCCCACACTCAGCAAGCAGCCAGGCAGAAAGCAGGTAAG-GCCTGGGAACCCTTCCGCCTGT---ACTGATGCTGCGGCGGG--------------CCCGAGGGCTCCATCTGGACCTCTCTTGTTCCAGGAGAGTCGGAGGATCTTGCCAGCCGACTACAGTCCTCCCGACAGCGTGTGGGAGAGCTGGAGCGGACACTGTCTACCGTGTCAACGCAAC-----AGAAACAGGCAGACAGGGTAAGACAGGTCGATT-CTCTGGCCATCAGCAGCTT--CCTGGTGGAC-----AGTGAGCCTGAAGGGCTTTGCTGCATGGCCGGGTGTCT--CACAGCATACACCAC-GCCAATTCTTGCTGCTTTTGTTGTGTGGTTGGTAAAAGCAACCTGGGGGATGGGTACCCTGC--TGGGTAACTGGGG----ACTGTATAAACA-AGCACTGAATGCAACACCTAAAGG-CAGGTGCCTGCTGTGACCCTGCTGTTTGTCTGTGGCCTTGACCAAGTGCTAAGTGATGGGATGGGTGCTCAT-CTCTGA----ACAG------ATCTTCAG-ATGGTGCCATTTGTGGAGGGAGAAGAA---TGTGCGTGTG--------------CAGTGTATGCAAATCATGTCTGAGAGGATTGGT--AAACTTGGGTGGGG-----AGGGTGACTGAATGG------CCATCTG----TTCAGAG-------------GAGAGCAAGACTGAGATAGAAGTTAAATAAGAG---AAGTATCCTCCGCTTATCTGCAGCCCC--------caggggaaa-gggcctagagagttagaca-cccgaaatgttcaagtctcagctctgttgacctaagtgatttcaggccagcacgtag--------actttgtgtgctgtt-tctgcccagtgtggg---tgatggcaactgt---tctagatgtgtatgaagattgcatgggattattagcaacagtgcctggt-aagtgct---------------cagtg--------aacaataTTAACAACACCAGTGGTGTCCAAGAGTTCCTGGCCCAATGCTAGCCTGCTGTAAATGTCAATTTTTTAAAACTTCATAAGGCTCCC-ACCTTACTG-----TCCAGAAGCTAAGATCACAGTCTTAG a score=30637 s hg17.chr15_random 77096 1838 + 784346 CCTAGCCCTGGCCCTTTTAAGGGGCACTGT-GTGGAATGGCCCGGCCTCCCCAGATTGAAACTTCTCA---CTCTTCAGCAGTTCTCCAGCCGCAGTAAAGCACGTATGGAGTG----GAAGTTAGAGCAGTCCATGCGGGAGCAGGCACTGCTGAAAGCGCAGCTGACACAGGTGAGGTGTTCAGAGGGAGGGATGTGGAAGGAAGATGACCCCAGGTAACCAGGAGCAGGTGAGGACCAGTGACA--GCCCTTCCTAATTTCTGTGCCCATTCTTGCAGTTGAAGGAGTCACTTAAAGAAGTCCAGCTAGAGAGGGATGAATATGCTGAACATCTAAAAGGAGAGAGGGCCCGGTGGCAGCAGAGGATGAGAAAAATGTCGCAGGAGGTGAGATCTGACCCTTCAGCCCCCCCacattagataggtcactg-gatctttctgggcacctgtaaaatgggaatagtaCAGCCAGAGGTGGTCATGGGTCTGGGCTTTGTGGAGGTGGGGGCAGAGAGAGAGATGGTAGCATGTCCAGCCTCCAGCCCCTCTCTCCAGGGCCCTTT----CCCCCTGTGCTTTGGGCAGGTTTGCTCGTTGAAGAAGGAGAAGAAGCATGATAAATATCGGGTAGAGAAGCTGGAGAGGAGCTTGTCCAAACTCAAAAACCAGATGGGTAAGATGGGGCTGGCGTGACCTGGCAGCAGGACTGGCATCAGAGGGCTGTGAGGGTGGCTTGGAGTGCCCCAGCGAGGTGGGTGGATGGAAGGGCTTTGAGGCAGAGGGAAAGAGGTCTGTGCCAGGA-------GACggcaagtcttgtcatctca-atgagcctcagtgtccccatcagcaaagagggCCCGTTGTCAGCCACCCGCAGTGCTCTTTCTCTGAAAGTG----------------CTTTGGAAGACTGGCT--ACCCATCTGG---GTGCGAGGAATCATTAGCAGTGAGGCTA-AGTTTGAGGAGCCGGAGAGGAGCTGTGCGCCAAGAGGAGGGTTttttcttttcttttcttttctttttttttTGGAATCCAGAGG-----CTCTTATTAT--CTGCTTCCTTTCTCAGCTGAACCTCTGCCCCCGGAGCCCCCAGCAGTGCCCTCTGAGGTGGA------GCTGCAG------------CACCTGAGGAAGGAACTAGAGAGAGTGGCAGGAGCGCTCCAGGCCCAGGTGGAGTACAATCAGCGCATAAGTCTCCTGAATGAGGGGCAAAAGGAGAGGCTTCGGGAGCAGGAGGAGAGGCTTCAG---------GAGCAGCAGGAGAGGC-----------TTCCAGAGCAGGAGGAGAGGCTTCA-------------------------------------------GCAGCTGGCCGAGCCACAGAACAGCTTCAAGGAGCTGGTGCGTTGCCCCAGCTGGGGAGCCTGCCCTCCTCcctagccctccaggcctttgtttccccacctataaaatggggcagtGTAGCCCTCAAGTGAAATGTTACTCCTAAAGGCACCTGT-GAGCCAGAGCCCTGCTCTGGTGGCTGTGGGAGACAGGGGATGATTTTTCTAACCTGCCTCCACCCTTCCCGGTGCCATGGGAGGCAGT---CACCAAGTTCTGGGGTCTCCAGCTGCAGTGGGTGGCTGCTGATTGCTTCTCTCTGTCCAGAACAATGAGAACAAG---------AGCGTACTACAGTTGGAGCAGCAAGTAAAG------------------------GAGCTGCAGGAGAAGCTAGGCAAGGTGAAGGAGACGGTAACCTCCACCCCATCCAAGAAGGTCTGGGAGGTGGGCACCAGCCTCTGGGGAGGGGAGGTGCCAGGCCAGAGGCAGCTCCAGCCCAGGGGCAGGTGACCCCAGCACCCTCCAGGGCAGTCCTGTGGCTGTTTCTTGCTTCCTGCCCTCTGATTTTAGAGGTGGGTAGCCCTGGGCTCCTCC s mm7.chr2 32309933 1707 + 182548267 CCTAGCTCGCACTCTTGTGGGGAGCACTGCAGCGGAACAGCCCAGGCTCCCAGACCT--AACCCCTCATTTCCCTCGCACAGTTTTCTAGTCAGTCTTCGGC-CGCAGGCGGTAATGAGCAGTTACAACATGCCATGGAGGAGCGGGCTCAGCTGGAGACCCATGTTAGCCAGGTGTGGATCTGTGGGGGCAGG-----GGAAGGGCATGACCCCAGATGGCCAAGGGCAGGTGAGGACCAAGGACACAGCCCCAAGTAACGTGTACATTGACCGATGCAGCTGATGGAATCACTGAAGCAGCTCCAGGTGGAGAGAGACCAGTATGCGGAGAACCTAAAAGGAGAGAGTGCCATGTGGCAGCAGAGGGTACAGCAAATGGCGGAGCAGGTGAGGCCTCGCCTCT--------------------GGTGTCTTTGCTTTTCCTGAGCATC---------AGCGTGGTGCAGCTGAGGG--GTTCGGGGCTTTGGTTTTGCAGAGGTGGG--CCTGGGGATGGATGGTG--------------------------CCTGGGATCTCTAGCGCCCCCTGTGCCTTGGGCAGGTGCATACACTGAAGGAAGAGAAGGAGCACAGAGAACGGCAGGTACAAGAGCTGGAGACCAGCTTGGCCGCACTCCGGAGTCAGATGGGTGAG-TAGCGCAAGGGTGACCTGAGAGCGGGAGTGGC-TCAAAGGCC------AGTGGCTTCCATAGCCCTGG--GGGCAAGGGGGTGTGAGAGCATTGTA--ATGGGGCAAAAGGTCTCTGTCAGGACTGACCAGGTGACACGCCTTGTCATCTCTTATGTCCCTCTGTGTA---------AAACAGGGT---------GGCATGCCTACTGCTATACCTCTGCAGGTGACTGAGCACCACAGAACTATACTAGAGTAGCTTGACACACTTAGCTCATCTGAGACCCTGACAGAAAAGAAGCCAGAGCTTGGGGCA------GGGAGCCTGACTCCCAG--------------------------------------TAGAGCCAAGAGAGGACCCCCTCACTGTGCCTACTTCCTTTCTCAGAGGAGCCACCGCCTCCAGAGCCTCCAGCTGGGCCCTCCGAGGCGGAAGAGCAGCTGCAGGGAGAGGTCGAGCAGCTGCACAAGGAACTGGAGAGGCTGACGGGACAGCTACGGGCTCAGGTGCAGGACAATGAGAGCCTGAGCCACCTCAACCGGGAGCAGGAGGGGCGTCTGCTGGAGCTGGAGCGGGAGGCCCAGCGCTGGAGCGAGCAGGCCGAGGAGCGCAAGCAGATCCTGGAGAGCATGCAGAGTGACCGCACCACCATCAGCAGAGCACTGTCACAGAACCGAGAGCTGAAGGAGCAGCTGGCCGAGCTGCAGAACGGCTTCGTCAGGCTGGTGCG--------------AATCCTGCAGGCCCTCCTTGCTCACAGGGAATGTAACCCTCAA-----------GGGTGCTGTCCACCTCACATGAGGTGCTAGCTGTCAAAGCACCTCTCAATCCAGAGACCTG---TGGTG--TGTGGGA--------ATGAT------------CCAGCAGTCTTCCCTGCTCTGTGGGAGGGAGCACACATGCAATTCTGGGGACCCCTGCCACATTAGGTC-CTACTGACTGCTGCCTTCTGTCCAGACCAATGAGAACATGGAGATCACCAGTGCGCTGCAGTCAGAGCAGCATGTCAAGAAAGAGCTAGCCCGGAAGCTGGGAGAGCTGCAGGAGAGACTGGGAGAGCTGAAGGAGACGGTAAGGCCTACCAC-----------------------------------------GGGGGGTGCCAG--------------------------------------------TCATAACAGTCTAACTGCAGCCT------------------------GGAGCAGGCAGTCCTGGACTGCTCT a score=34174 s hg17.chr15_random 79393 1784 + 784346 attcaagtacttcacatctctaagtctctgtttctttaacttcaaaaggaagttagcattttccttacagaggtgctgaggattaaatgagataatacatgggaagcattaggcct--gtagcacatttagcagatggtggttGGCTCCCACTACTTTTCTACCATTCTGTGGCCTACAGTTGAAATGGTGGGAAGAGGACATGAGATTTGAGGCTGGGGAAGGAGGCATGGGGTTCTAGGAAAGGGAGGCAGTCACTTAGGCCTGGAGTAAGGGGCCAGGGGCCTGGGCAGGCGACAGAGCCCCACAGTGCCCTCGCTACCCTATTAATGGGCCCAGAATCTGCAAACCAGCCACCACGTCCCCTCACACCCAGGGTCTTCCTGCAGGTGGAGCTGAAGAGCCAAGAGGCTCAGAGTCTGCAGCAGCAGCCAGACCATTACCTGGGTCACCTGCAGCAGTACGTGGCCACCTATCAGCAGCAGGTGGCCACCTATCAGCAGCTGACCTGTGAGAAGGAGGCGCTGTACAGGCAGTGACTGCAGCAGACCCAGCTAATGAACCAGCTGCAGCAGCAGGAAGCTTGGGGCAAAGCGGTGGCCGAGATGGCCTGCCAAAAGTTGCAGGAGGCCCAGGGGAGGGAGCTGCCGAGGATGGGGCCGTGAGGGGGACGAGCTGGCAAACTCTGTGCCTTCTCACTCTTTCCTGGCCCCTTAGGAGCGTCTGGAAGCTGCCAGCCAGCAGAAACAGCAGCTAACGGCCCAGTTGAGCCTCATGGCTCTCCCTGGGGAAGGTACGGGAGACCGCTCAGAGGAAGAGGAGAGAGCCCCAGGAGGAAGGGGGGACTGCTAGCAGCATAGGATTGAGGAGTTGGAAGAGACCTTTAGAACAGCTGGTCATtatactaacc---gggtgcctgcactaagttcagcatcaatatggtgacctcctgggagcggggggccaccaagttgcctaaggatggctgaactggccgaggtcagaaagggagcaggtcagaactcccacatcgaccagtagtgggaatatgcctgGGCAGTATAGCAAGATCTTGGTTCTTCAAAGTAAAAATAAATAACAGCAGCTCATTCCTCTCTGGGGAGGGCCTGGCTCAGGGTTACACAATGAGGGTGGAGGCAGAGGTGGGCCCACAATACTTCCCTTGTTGAGTTGTCTGAAG----ACCCCTCTGGCCACCCCCCACAGGACACGGAGGAGAACATCTGGACAGTGAGGGGGAGGAGGCACCTCGGCCCATGCCGAGTGTCCCAGAGGACCTGGAGAGCAGGGAGGCCATGGTGAGCCTGACTCCCCCTGCACCCATTTTGCCACCTTTCTCTGTGGTCCCTCCAAGACCCCTTTATGCTCTTCGTTTCCCTGCCTTCTGATTTCTCTGGACCCTCACCCCTT--CCGAGAGCCAGTGGTCAGACACCATTTCACCTGTGACCAACATGTGCAGTCTCTGGGGCCCCAAGGGAAGGGGCTGCGCTCCACCTCTCTGCCCCATTTCTTCTGTGTATGCCCCTAGAAGA-ATGCTCACATCTTGCCCTCAGGTGGCATTTTTCAAGTCCGCTGGAGCTAGTGCCCAGGAGAAGCAGGCACAGTTACAAGAGCAGGTGAAAGAGCAGAGGGTGTGCTGCCAGCGCCTGGCTCACCCGGTGGCCTCGGCCCAGAAGGAGCCAGAGGCAGCGGTCCCAGCCCCAGGGCCTGGGGGCGAGTCTGTGAGTGGGGAGACCCACCGGGCCCTGCAGGAAGTCATGGAGAAGCTG s mm7.chr2 32311723 1278 + 182548267 GTTCAAATGCTTCCCATCTCCAAACCC--ATTCACTGAACTTAAAAGATGAGTT-------TCCTCAGAGAAGTGTTAAAGGTTAAATGAGA-AATGTGCATAAAATATCAGGCACTAGTAGTTAGTGCAGAACAGGGTGGGTTGCT-------------TTCCACTCT-TGGCCTA------AAGTGATGAGAAAGGTG-----GGTGTGAGGCTGGTTACAAAGGCAC-------------------------------------------------------------------------------TGCCCTCATTCCT-----------------------------------------------------GGCCGTCCTGCAGGTGGAGCTCAAGAGCCAAGAAGCACAGGGTCTACAGGAGCAGCGAGACCAGTGCCTGTCCCACCTGCAGCAGTACGCTGCTGCTTACCAACAGCACTTGGCGGCCTATGAGCAGCTGACCTCTGAGAAGGAGGCAATACACAAGCAGCTTCTGCTGCAGACTCAGCTCATGGACCAGCTGCAGCATGAGGAGGTACAGGGCAAGATGGCAGCCGAGCTGGCCCGCCAGGAGCTGCAGGAGGCCCAGGTGAGGCAGCTGTTAAGGCTGGGCCC---AGGGGGAGGACCTGGCCTCCTCTGTGCCTTCTCACTCTTTCCTGGCCCCATAGGAGCGCCTAAAAGCTACCAGCCAGGAGAACCAACAGCTCCAAGCCCAGCTGAGCCTCTTGGTCCTCCCTGGGGAAGGTA----AGACCACCCAGGAGGAGAGGA-----------------------------------CTAGAGTTGATGTATTTGGAGAAGCTTTG-------------ATTGGGCTGACCCCAGGGT-----------ATTCAG---------------------------------------------TAGGGATA-----------------CAGAGGTGGGGC---TCTGAGCTCTC----------------------------------------------------------------------------------TTCCCCT--------------------------------------------------AGCCCACTCAGTCTACCTGATGGGATTATTAGAGGAGACAACCTACTGTCTGCCCC---CAGGAGATGTGG------ACCAGGAGGAAGAAGATGAGGAGGTTCCTCAGTCGAGTCTGGCCATCCCAGAAGACCTAGACAGTAGAGAGGCCATGGTGAGCTGGGCT----------CTGTCTTGCCCCTTCTCTTT--------TCTA-----CCTCTGTGGTCCTCGGTTTCCTACCCTCTGACTTCTTTTGATTGCCACTTTGTGCCTGGAAGCCAGTGGTCAGTCTCCC-------------------------TCTCTG-------------------------------CCCTGCCCCCTTTGTCCTGAGCATTTCCCTGAAAGGCACACCTCCCTCTTGTGTGCAGGTGGCATTCTTTAATGCCGCTATAGCCAGAGCAGAGGAAGAACAGGCCCGACTACGTGTGCAGCTGAAAGAGCAGAAGGCACGTTGCCGGAGTTTGTCTCACTTGGCAGCCCCAGTCCAAAGCAAGCTTGAAAAGGAGGCAGTGGTCCCCAGGAATGTGGATGACTCTGCATCTGAGGAGAGCAATCAGGCCCTACATGTAGCCATGGAGAAGCTG a score=27744 s hg17.chr15_random 81227 863 + 784346 TGAGGGCAGGTC---GCTGGCGAG---ATGTGACCCCATTATTTTGGCTCCAGAGCGGCTTTATGGACCACCTGGAGGAGAAGGCAGACCTGAGTGAGCTGGTGGAGAAAGAAGAACTTGGATTCTTCCAG--TACTACAGAGAGGGATGCCATCAGTGAGTGGGAGGCCAGGGCATGGCAGGGGGAGC--TGCAGGGCTGT----TGGAGGGGCCCCAGCGTCTGAGCCCTGTCCTC-------------CCGCAGGAAAGTTTATCACCCTATAACAAAGCCAGGGGGCAGTGCCAAAGATGCAGCACCGGGAGGAGG------ACACCATCAGGCTGGCCCTGGACAGGGAGGAGATGAAGGTAGAGTGTGCAACATCTCTGCGGGGGTGGGGGTGGCTGTGACGGTGAGCGCTGGCAGCAGCGTGACAGCTGAGCACCCCTCCCTCCAGGTGAAGCTGCTGGAGCTGCAGGAGATGGTGTTGCAGCTGGTG-GCGACTACAAGG---GACACAGCAAATTCTTGGTGACTGCCCAGAACCCTGCTCATGAGCCCAGTCCAGGAGCCCCAGCCCCCCAGGAGCTTGGGGCTGCCCACAAGCATGGTGGTGAGTAGAGCCCTCAGGCGGGGTGGGCAGGCAGGAGCAGGGGGGCTCTCACTGAGCTCAGAT------CCCCGCCTCCCTCTCTCCAAAGATCTTTGTGAGGTGAGCCTCACTGACAGCGTGGAGCCTGTGCAAGTAGAGGCCAGGGAGGGTTCTCCCCACGACAACCCTACTGCACAGCCGATCGTG------------------CAGGACCACCAGGAGCACCCAGGCTTGGGCAGCAACTGCTGTGTGCCATTCTTTTGCTGGGCTTGGCTGCCAAGAAGAAGGAGATAAACATCACCATCGTCAAAGAG s mm7.chr2 32313032 902 + 182548267 TGGGGGCCAGCCAGGGCTCCTGAGTCCCTGAGACCTC--TGTCTTGGCTCCAGAGCCGCTTCCTGGAGGTCATGCAGGAGAAAGTGGAGCTCAAGGAGAGGGTAGAGGAGCTTGAACATTGCTGCATTCAGCTTTCTGGAGAGACAGACACCATTGGTGAGGTGGAGCCCAGCCCAAGGCAGTGGGGGCTGTGCAGGGGGGTAGACTGGGGGAGCCACAGTGTCTGAGCCTTGTCCACCTGCCTGCCGTCTCCACAGGAGAGTACATTGCCCTTTACCAAAATCAGAGGGCGGTGCTGAAGGCTCGGCATTTGGAGAAGGAAGAATACATCAGCCGGCTGGCTCAGGACAAGGAGGAGATGAAGGTAGG----CCTACACTTCTGTAGTCCAGGCCCTGCCT---------AATCTGGGCTGGGCCCTTCAAGTTGAGCTCCTTTTTCTCCAGGTGAAGCTGCTGGAGCTCCAGGAGCTGGTGTTGAGGCTTGTGAACGAGCGCAATGAATGGCAGGGCAAGTTCCTGGCCGTCTCTCAGAACCCTGGTGACGTGCTCACCCCAGTGCCCACAGGCTCCCAGGAATTTGGTGCTGCTGACCAGCAGGATGGTGAGTAGAGCTGTT--GTCTCTTGGGAAGGCACAAAGGGGAGGAGTCCCATGGCGTGCAGAGCCATGACCCCCTCCCCCTTTCTCTAAAGACCTCAGGGAGGTGAGCCTGGCTGACGATATAGAGCCTGCACAAGGAGAGGCAGGGGTACCTGCTCCCCATGAGAACCCTACTGCACAGCAGATCATGCAGCTGCTGCGTGAGATCCAGAACCCCCGGGAGCGGCCAGGCCTGGGTAGCAACCCTTGCATCCCCTTTTTCTACCG-----TGCCGATGAGAACGACGAGGTGAAGATCATGGTTGTATAAAAG a score=70814 s hg17.chr15_random 82133 1834 + 784346 ATCTCCTACACAATTCATTTACTTCGTTTGAATGTTATAGCCACTTATGATTATTT----GTGTTTCTAATTTATAGTTTAAGTTTATTTGTAAATAGTTAAAAGAGAGTGGGTCTCTGTG--GCTTTCACTGATGTTCACTCTGGCATACTTTCGCAATTTTCTTTTTC------AATTTCATGATTGTAGGTCATTAGCGTGCATATTGAGTTTGCCCTTACGTGGTGGG-GTTCAAACACACAAAGACCCACTATTTGCACAAAACTATTCTTGCTGGTTTGGAATAGGCTGCCATGTGTTTTTAATGTTATTGCAGCATGTATATTCATTACAGAATTCAGATAAAATTTGCCTATGTTCTGCTAT--TGTTTGATCTAATCTTAATCACAGTGAGCTCTTCATTAGCACAATATGTGGTTTGCCC-CAAGTGTGCACTATTTAATACTTTGTAATATGCCACCAAGAGTACTGACATTTAGAGTTGTTTAAAGGCCGAGAACTGGAAACAGCCTTTCCCTCATTTTCTGTGTATTGGTGATGGGAGTAATAACATTTTGGGGGAGCTTTTTAAATTTCACAGAAGAGGAAAGTTGCCTGCTCTGGCAGGTATGTGCAAGATAG------------AGTGTGTTTCATTTGTTCTGTTGCCAAGAATTAGTGCTGTACTATTGTAGTTCCTTTAGGATTTGTATGTGCTCTGGGCTCATGAAGATATTGCA-----TCATGAGCTGCAGCA-GTTGTACTCTTTTTTGATGACCTAAAAAGGGCTTATTTCTGAGGAATGAAAGGTTCCCATCATTGACTATGGATGTGGAAAACCTTTCCTAGCTTAGAGCATTTGTATC-----TATATTTTAAAGTCAGAGTTCATGTTACCTGTTTTAATCACATGACTGCATGTCCCAGTACACAAAAGGGCACTGGTTGGCATTCTTCTTAATGTATTTAGTAAAGATCAGAAGAAATCCTTTAAGAGTTTA-AATGTCCCTGGAACACGCATACAGGCTCTAGTCAAGAATGAATTAGAGTGAAGGAAAGCTGTGTGACACCTGGCATTCCTCTGT--TCATGGAGCTTCTTTGAGGCTTGAAGATTGATTTTACCATCTAGACCACTCTGCC---TATTCTTCAACCACCTTGGTTACTTTGACATAGGAATTGACTTCTTTTCCTTGAATGGAAAACACTTTGAAATAATAATAAACATTGTTATAAACTAATATATGTGAGAGTGCTTAGTTGAAACAAAAAGGAGTTTTAGTAGACAGTATTATACTATCTTTGAAAATCAAGGAGAAGTTTATGCAACTTAAAATGTGTACAAACTGCAGTGCAATCTACTGTTGGTG-AATGTCAGTGTATTATCAGGAAACATGTCTATACAATCACAGAGTTATATTTCCTCACAAACTTCTTTGTGAAGAGTGAAATGTGTTTCTGTACCTCTGGGTTTCACTTACGGGCATATTTTGTGCAGTATTTATGTGATTGTGCCTATGCATGATGAATGAATGAATTTCAGTTGTACATTGCCTAAATCATAACTTGATGATGCTTGGGAAAGACTCAAC-----AGTTAAAACTTCATGAAGTTCTAATGTCTGTGTTCCAAAACACATCACATTATT-AGGATGTAGGGAGATATGTATGTGTGCTCCCTGGGGTGGGGATTTCT--AGTTACTAGACCATCTCCATTTTTAGCAGTTGGCATCCTCATGATACTTTTATAAATACGACATTAACAGGAGAGCAGCAGTACGATTTTGCCGATGGAATAACAGATTTGCCGGCAATCACTGAAAG--AGTGCAAATATCGGGTCCTTGTGACTTC-AACGGACTCTTCCAAATTGTATGAAT s mm7.chr12 4608702 1800 + 117814103 ATCTCCTACACAATTCATTTACTTCGTTTGAATGTTAGAGCCACTTGTGATTATTTCTATGTGTTTCTAATTTACAGTTAAAATTTATTTGTAACAATTTCAAGGATAGTGGGTCTTTGTGTGGCTTTCCCTGCTGTTCTCTCTGGCATCCTTTAGCATTTTTCTTCTTTTTTAAAAATTTGGCACTTGTAGGTCATTAGCATGCATATTCAGTTTGCCCTTACGTGGTGGGAGTACAAACACACAAAGACCCACTATT-GCACAAA-CTGTTCTCTCTGGTTTGGAATGGTCTGCCATGCTTTTCCAATGCTCTTGCAAATTATATATTCATTACAGATTTCAGATGATGTTTGCTTATGTTCTGCTATTATATTTGATCTAACCCTAATCACAA-GGGCCCATAATTGGCTCCATCTGTGATTTGCCCTCAAATAAGCACTGTCTGTTACTTTCTAATATGCTACTATGAGTACCAATAGTTAGGTTTGTTTGAAGGCCACGAACTGGAAATAGCCTTTTCTATATTTTCTCTGTAAACCGAGCAGGAGCACTAACA--TTGGGGGACCTTGCCTGGTCTCACAGAAGAAGAAAGCAGTGTGCTCTGACCACTGAATGTAGAGTAGTGAATGTAGAGTAGTCTGCCTCAGCTGC-------CCACGAATGAACGCGGGCCTAGGGCAGTTTCCTTATGGTCT-TAGGTGCTCCAGGC---TGCAGAGCTCCCAAACTGCTCTGGGCTCCAGCACACAGTG--CTTTATTGATGACATAAACATAGACTGTTT-TCAAGAATGGAAAGTTTCCATCACTGACGGT-AAGGTAAGAAACCATCCCTATCTTAGAGCACTTATATCAACAATATATTCTAAGGT-AGACTTTATGTTACCT-CTGTAGTCAGGTGACCACTTACCCTAGTATACAAAATAACACTTGTTGGCA---TTCATAATGCATTTAGTAAAATCCATAAGGAAACCTTAAAGAGTTTGTAGCAAACCTGAAGCCGACATGTAGGCTTTAGCCAAG---GACCCATAGCATAGGGAGAGCACACGAGAGCTGGCATTCCTCTGTGCCCAGGAGGCTTCTTAAGCGATT----ATTGATGTTACTGTCTACATGTTACTGGTTAATAGTCGTCTCCCACATTGGCTATTTTGGCATAGAATTTTACTTC-TTCCTTTGAGTGGAAAGCACCCTAAA--CATAATAGACATTATTATAAATTAATATGTGTGATAGCACTTAGCTGATAT------GAGTTTTAAT--ACAGTATTAAACCATATTTGAAAATCAATGAACAGTTTATGCAGTTTAAAATGTTTACAAATTGCCGTGCAATCTACTGTTTGTGAAATGTCA------------GATAGGTGTATATACAAT--TAGAGTCCTA-CTCCTCACAGCATTCTTTGAGAA-AGTAAACCATGCTTTTATACCTCTCGCTTTAATTTAAAGGCATATTTTGTGCAATATTTATGTTAATGTGCCTATATATAATGAATGAATT-ATTACAATCGTGCATTGCCTAAATCATGACTTGA-------GGGGAAAAAAACAACAGTTTAGTTACAGTTTTACAAAACCCAAATATCTGTACT-GGAAACAT-TCACATTCTTGAGGTTATTAG-----ATGTCTGTGTGCTCCCTGGGTGGGGGTTCTGTAGAGTCCTTAGACCACCTCCA-TTTTAGCACTTGCCATCATGACAGTATTTT-----ACATAACATTCATAGGAAAGCAATAATTTCAATTTACAGATGG-GTAAGAGAATTGCCTGCAGTCACTAAATGACAATGCAAAGAC----------TGATTTCAAACTGACTTTTCCACGTTATATAGAT a score=20148 s hg17.chr15_random 84158 753 + 784346 AGCATCTGCAACCAATCTGACAATAATGTGTTCATC----AGGTGCCTATGGATTAAATCACATACTGGC---ATATTTAAGCTGAATGTCAATCTGGAAAATAAATTGACTATATTAACAGAAATACCACTCTTTGTGTAGATATTTGTCGTATATTTAAGAAAAAGCT---AAAAAGAATGGAAATCGCATGACTATAACTTAAGTCTTTCTTCAAAGTGCATGCAGTCTTTTGCGATACCTCATTCAGCCAAGTATTGGTATTCTTCCTCATTCGGTATAAGGCAGCTTTCAATTTGCTTAGAAGGCAACATTGGAAGGTTAGAGTTCATCAGAAACAGAATTCTAAAATGTGAGTTCAATTCAATAAATTTGAATTTCTGTAGGAAGAATCAAATCACCGATTTAAAGAGTGCAATATATAATAATCATTTTTAAAGTATTGGATTAAATCTGATAGGTTTTCCAGAAATGAACAAAAATCAGCTCTAAAACCAAAGCTGAT-TTTTAGAAAATTTGAAA-ATGTAAATCAGCCCTATCCATACTATAGTTTCTCTAAAACTTTATCTGAAAGAGTCATTTTAAAATAAC----TATTAAACAATGTAACTGCTATCTTAATGTTCTGAAATAAGTTAAAACATTTTAAAATATGAATACTGTAAAGGAAATAA--ATGGTGGGAAGGAAAAGTAGAGAAAGAAATGCCAATTCCAGTCCAAAGCTTTATTTGCCAAGTTTTCTTGGAATGAATTTTACCAATTTAT s mm7.chr12 4610931 690 + 117814103 AGCATCTGCAATCAGTCTGAAAATA---TGTTTAACAGGTAGGTGCCTGCGGAGTAAGTCACATACTGGCCCAACAATCAAAGCAAATGTCAGTACAGCAAGTAAACTCACTGTGCTAACCG-ACTACTACTC------TAGGCATTT-CATCATACCTGATAGAAAGCTGCAAGAAAGGAGATGAGTGACAT-ACAATCGTTTACATTGTTCTTATAAGTGCATGCAATCTGTTGCAATCCCTCATCCAGCCGTGTGTTTGCTTTCTTCCTGATTTAAAGTAAGGCAGCTTCTG--TTGCTTAG--------------------GACTTTCTTGGAGACATAATTTACACATTAGAACACAGTG-GATCAACTTGAACT--TGTAGGATA--------CACCAGTTT-AAGAGCACACTGTGTGACAGGCATTTCTAAAGCATGCACTTGAACTTGATGGGTGTTCCAGCAGTGAAGAAAAG-----GCTATAGCCAAAGCTGTTATTTTAGAAAATTTAAAACCTAAAAGTTAACCTTATTGATCATATACTTTCTCTGATTCTTT--------GAGAAATTTTGAAATAATGTAATACTTAAAACAGTAATTGTT---------------------TTAAAATACAACGCGATACTAGAGTTCAAAAGAAAATGATTAGGGCTGAGAGAAAAGGCAGAGAAAGAAATGGCAGGTCCAGTCCAAAGCTTTATTTGCCAAGTTTTCTTAG-ATGAAATTTACCAAGTTAT a score=8037 s hg17.chr15_random 93731 525 + 784346 TTGCGGTGCGGTTTCCCAGCGGCTCTCTTGCCTTGCAGCTTGTGTCGGGAGTTGCAG---ACAGCCATGGC-CCATGGGCCTGGCGCTGACGGACCCTGGAGCGGTGTCTGAGGGAGGTGGGCAAAGCCACTGGCTGGCCCGAGTGCATCCTCACGTAAGTGCACAGATCCCGGGCTCGGGTGCGACTGCG---GTCGCACGTGGACACGGGTTGCAGACCCCTGGCAAATTGTGGAGCTGGGGGAAGGTAAGGGGAAATGTAAATCACTTTTCCCCACATTTCAGAGGACCT----------AGGCTATCAAAATTTTAAAAATTGTTAAAACTTTTACAGTATGGATCTCTCAGTTGAATGTTATTGAAATCAACCTAACCTCAGTTATTCACGCCTATAAGCTCCCCTTGAGGCTTATTACGGCCCCCATCCCCCTACACACAACTGTGTTGGTTTCTCCTTCCGCCTGTGCTCCTAAAGCACTCAGTGTTTACCTGCCATCATACTTTATTGAAAGCACAAACTTGTCACTTGTCTGT s mm7.chr7 81621501 463 - 141766352 TTGGCGTACTGCTTCCGGCCGGCCGGCCGGC-TCGCAGCACTCGCGTGGTGCCGTAGTGTGTAGCTATGGCGCCTCGCGTGTTTCGTCGACAGACTCTGGAACGGTGTCTGAGGGAAATCAGGAAAGCCACCAACCGACCGGAGTGTTTCCTCACGTAAGT--ACAGATCCAGGTCTGGGAGAGAGCAGCGCGCATCTCACCGGTGCTGGGCGGGCCAGCATATGGCAACTT------CTGAAAGCCAGGAAGGGAAAGTACAGGTCGCTTAGCCCCA-ACTTCAGACAGTTTTTGCTCCGTTGGCCTGTCAAAATGCTAAAAGT----AAAAGCGGCTCGGTGCAGATTTCCTAGTTGTGGGCTATTGCA------CTAAGCCCAGTTATTCGCGTCCAGA----------GAGGCTCATTGAGG-------------------------GCGGAATATGCTTTCTGAATTTGTCCCCAAAATACACA------------------------CTGAAAGTACGTACTTGTTGCTTGTCAAT a score=1122 s hg17.chr15_random 94289 84 + 784346 TCATGTCTCTTCCCAACACAAACGTTTTATGTGTATTTTGTTGAAGAActtcaaatatgacctataaaattatgactc--atttat s mm7.chr7 81622436 56 - 141766352 aCTTCTTTCTTCCCAGCAC------------------------------TTTGATTAAGTTCTGTAAAATTATGACTCTGACTTAT a score=38654 s hg17.chr15_random 94509 1419 + 784346 CAGCATCACAAATTCACCGTGTCCAAAATACAGTAGAATGTTGTTTCTACCCACCTACACTCTGCCATCCGctgaagtcctttccccttgctccaccactcaagccttgcctatcgcagtaaatggcagttctgtctctccagttgctcgcacataaaactaggctgctattttgatgtcttcacttttctctattctgt---atctaattccttagcaatcctgtcagttctacctccaaac-------tgtactcagcatattcactgctctaactccagcttaaatcaccatcatcctttgcctggaatgctgcatcaaccttctaatcactctactttcctcctcctccttcctccctttcttcttccttcgtataaatcatcatttcatccttctgcttaaaatcttctcacattttcttattacacttaaaacggcaaactcttacccttgagccctgcagaatttgg--------------ctcccatcagtctctccgacttca------ccttctgcctcct---tcacgctatagccatgctcacttttttattcctcaggcttaccaagctcaattgcatcttagagaatttgttcttgctgtttcttctgcctggaatacatgtttcccaatctttataaga----ctatacttgtctgtaagtttca------cctcagatgtcacatctaggagaggttttccttgaccactgtaAGCCAAAGCAAATGTTGATCATTGAGTGAATAAGGGAATGAATGAATGGAGTGGTATATAATGTAGCAGAGTAGAAAATTTAAGGCTAATTCTCTATACATCTCCAAGCAAATAGATTTGTAATGCTTTTCCTGCCAACAATCTATACAGCTGATTCACAAATACTTGGTTGACAGGTTTTATATATCACTGTGGCTCATCAGCTTATATATTGTTGGGG-CCAGAATCTATACTTACA-------CTTTATTCAAATTTGATTTTACAGAAGAGTTGAGGTTTTTATTTTTCTTTTAATTAAGAGGGCTGTGAAATTATTATCTATAATTCTAAATCTCATTTAATT--CCTCCCAATAGGTTTCAAGCTGGATTGGAACCAAAGTTCACTTCTTTAACGAAAGTGCTTTATGACTTTAATAAAACAGTAGAGAATGGTAGAATCCATGGCAGCTCTTTACAAAAACTTGTGATAGAAAGTTTTGATGATGAGCAGACTTTGCAACAACTGGAATTGCAAAATGAAGCAATTTTACAGTGCTTCCAGAATGCGGTTAGTGAAAGA----AAGATGAAGATATCAGTCTTCTCCCAGAGAGTGAAGAACAGGAGCATGAAGAGGCTGGTTCAGAAACAGAGGCTGATGGCCAGGAGGACCTAGA---AGATTTAGAGGAGGAGGAGGACGTGTCAGATATGGGTGGTGACAATCCTGAAATGGGTGAGAGAGCTAAAAACTCAAGCAAAT s mm7.chr7 81622682 1333 - 141766352 CAGTATCACAGACTCATTGTGTCCAAAATAGAGC-------TCCTTACCCCCTCCTGTACTCTTCTCTCCCCTGAAGTCATTTCCCTGT-TTCCATTACG------TTTACGGCCCCACGAAAAGGCAGTTCTATCATTTCATTTATTT--AGATTCAGCTAGTCTGCTTCCTTGATGCTTTCATTTTTCTCTGTCCTATTTTCTCTATCCCCTTTAGCATCCTGCCTACGCTATATTTAGACACTGATTCCTAGTTGTCATACTGACTGCGT---CTCCAACATAAA-------AATCCTTTGC----GATGCTTCATCAGCTTTCTAACAACTCAACT------------CTATCGTGCTTTTTGTTTCCACATTGTAAATTATCATTTCAAACTTCAGCCTGCAACTCT-------GTTCTCATTACGCTTAAAGTG-----TTCCTGTCTTAGAACTCTGCGTGGTTTCTGTCTTGCCACCCCCCCCCCCCCAGCTTCTATAACCTCAGCCGTACACTCTGCCTCCTCAGTCACACTACAGCTGTCTTGGTCTTTCTGTTCTTCACATT----------------GTCTGAAAA------------------------CCAGAGTTATGTGTTTCCACATCTGTACAGGATACTCTAT-TTTACCTGTAGGTCTCAATCCCATTTCAGATATCATATCCTTAGATAATTTTTCTCAA--GCTTAAAGCCAGG-----TGGGAATCACTTGCCAAACGACT-AATAGGTGA--GGAGTA-TGTATGATG---CAGATTTGAGGATTTAAGGCTGACTTCCTGGGTATCTCCAGGCAAGTAGATGCGTAA-GCTT----------CAGTATATACAGCAAAGTCA---------GGTTTTTAGTTTTTA-----CGGTCTGGCTCATCAGCAGG-GTACTGTTGGGAACTAGAGTCTGTACTTAAAATTGATGCTTCATTTACATTTTAATTTGCAAA-----TACGATATGTCTTTTTCTTTTATTTAAAAATGCT-TGATGCTATTGTGTATAATTC--ATTCTCACTTAATTTTCTTTCCAATAGAATTCAGAATGGACTAGCATCAAACTTCACATCTTTAACAAAAGTTCTATATGATTTTAATAAAGTATTAGAGAATGGCCGAATCTCTGGAAGTCCTTTACAGAAACTTGAGATAAACAGTTTTGATGATGAGCAGATTTGGCAACAACTCGAATTGCAAAATGAACCTGTCTTACAATACTTCCAGAATGCAGTTAGTGAGACAGTTGAGGATGAAGATATCAGCCTTCTCCCAGAATGTGAAGATGAGGAGTGCGAAGAGGATGCCTCAGAGGTGGAGGCTGACAACCAGGAGAACCTAGAGACAGACTT---GGATGAAGAACAACTGTCAGACGAGGGTGGTGATGTTCCTAAAGGGAGGGACAGAGCCAAAAGCTCCAGGAAAT a score=15938 s hg17.chr15_random 96560 433 + 784346 ACTAATTCTTTTCTTCTCTTTCTTAGATGAATGACAAAAATTACATCTTTAGAAAAAGAGTTGTTAGA-AAAAAGCCTTGGCTGCATGTGGGGGAAGTGACAGCACAGAAGAGACCAGAGAAGAGCCTCCTGGAGGAGAGCCTGCACTTTGACCATGCTGTCCGGATGGGTGCAGTGCTCT------TTTCTGCAAAGTGTTCACTTCTCTGCTTTTTCTGTGGTCCCATTTCATAGAAAGATTTGGGGTGAT----GTTTCTTTCCCTCAACttttattttgaaaacttgcaaacacagaaaagttgataaaatcatacagtgaacatctgtatgctattcaactggattcactagt---taatgttttgtcacacttgttttctgtcttctgcgtatggaagattgtatatgtgccctttttccccctgaatcatttcaaagtaa s mm7.chr7 81627916 423 - 141766352 ACTAACTCCTGGCTCGT--GTCCTAGATGAATGA-GAAAATCGCATCTTTGGAAAAAGAGTTATTGGATAAAAAGCCTTGGCAGCTTCAAGGGGAAGTGACAGCGCAGAAGCGGCCAGAGAACAGCCTGCTGGAAGAGACCCTCCACTTTGACCATGCAGTCAGGATGGGTATGGTG-TCTGCTGAGCTTCTACAGCATGTCTACTTTTGTGC-TTTTCTGTAGTTCCTTT---CAGAAAGATTTTGAGTGCTGATCGTTTTTTTTCCTCTGC--TTGTTTTAAAAACTTGCTAACAT--ACGAGTTGAAAAAATAGTGCGGTGAATACCTG--TGCCATTTAACTGAATTCAGCAGTTGGTAACAGGTTGAAATCTTGGCCTTTGGTCTCCTGTGCATCTTTGTGATTGTATGTGCTCTTC----------ATCATTAAAAAGTAA a score=6899 s hg17.chr15_random 97568 144 + 784346 ACATGTTGTATTTCCTTTGGCACCCGTGATTACAGAGGAAAC-ACCTTTCAACTGGAAGGTATCATTAAACAGAGGATAAGAGATCAGGTCAGTAAGAAT----TAAATTTCACTTAATTGAAATGTCACTCAAATGTTTAGAAATAAT s mm7.chr7 81629371 140 - 141766352 ACATGATATGCTTCTTTTAGCCCCTGTAATCACAGAGGAGACCACCCTCCATCTAGAAGATATCATTAAACAGAGGATACGAGATCAGGTCAGTAAGAACAGAGTGAATTTTAGT---------TTTCACTGCAATTTTTAGAAACGAT a score=14017 s hg17.chr15_random 101224 640 + 784346 AAGTGAAAGCCAGCCCCGCCCCT--CTCCTGGAG-----TGGGCGGGGACAGCGGTTGCATAGGCAGCTTTCCTTGT-GACAACACAGGTCCTTCATGACACGCTGCTGTCTGGCCACACCTCCTTTTCCTTTCATCTTTCTCATTGACCAATGGGCTTCAAGCATGAAGGCCACACCCCTATTCTG--CATTCTAGTGCAGCCCTGGTTACGCCTCCTCTGGCTCAGTCACACAGCGACGTAGAGGTGACTGGAGGTATATACTTG-TCCTCACCTGGATCATGCTGATGTGGccccaaccccacctccctacccatccccacctccctacccatccccacctccctacccatccccacctccctacccatccccacctccCTACCCATCCTATGATGTCCAAAGAAACCAGACAGAGCAAATTGGCCGAGGCCAAGGAACAGGTAAA-CGCAC-------CAACACCCCAACCCAACCCGAGGCCCCCTCTGACAGCCGAACTGCTG-CCAGAGTCTGTGCCACTCCTGAGGGACACCAGGCTGGGCCCCCCACCCCAGTGCCTCTGGGCTCCCCACACCAAAATCTTGTCAGCCAGCCCAACCCCCTCATAAGTCCTGCCCCTGCTCTGCCCGGCACACCAGGGTGACTTTGAGCAG s mm7.chr2 32295342 574 + 182548267 AAGTTAAAGC-GGTTCCGCCCCTGCTTCCCATAGGCCGCTGTGAGGGGTCA-TGGCTGCGCGCGCAGCTCTCGTCGTTAACTCCACCCGTCGCTCAGGCCTCGCGACCGCGTGGCCACGCCTCCCTGTC-GTTCATCGTTCTCATCAGCCAATGGGCTTGGAGAAGGTAGGTCACGCTGGGTTTCCGAGCGTCCAAGGGGCGCTCTGCACCCGCCTTCTCTGGCCCT----TGTAGAGAAGCCGTAGCTTCCGGAAGCAGTTTCGCGGTGGCTGCCGGGATCGTGGTGATGTGGCCCC---------------------------------------------------------CCCGCTTCCC---------------CCCTCCCCGCCCCGGGATGTCGGAAGAAACCAGGCAGAGCAAATTGGCTGCGGCCAAGAAAAAGGTAAAGCGCTCCGGGTCGCGGCCCCTTGACCCCACCCGAG--CTCCTCCAACGGCAGGACCCATGACCAGAGTCCGAGTCTTTCCCGAGACACACGGGTAGAAGAACC---CCTCAGCGCC-CTGGGCTCCCC-CAGTGAAGTCTTCTCAGCCAGCCCCGCCCCCTCAGCAACCCAGCCCCCGCCCTCTCAGTCGCCCCTAGGTGACTTTGGTCAG a score=12602 s hg17.chr15_random 101990 959 + 784346 TGCCACAGGGTGACTTTGGGGATGTGACTCCTGGAGCTCCTTGCTCCTTAATTGGCCCTCACCTCCTGCCGCCCCAAGCCTGACCTCCCGGGGCTCTTTGGGGTCACGTCTCCAAGGACCTGGCTCCCAATTTTGTGACCCCCTCCCCAGTCTCAAAGCGGCAACTTGGGCATTGCACTCATGTGTCCCCCCCAACCACTCCACCGAGGAGTAGAATGTAGTGATGTCACAGTCCCGCTAC-AAACTGTCATTACTACCACAAGACCGGCCT---TTGGTCTTAGGACCCAGTCCCCTAAGTGTTCTTGCCCACTT--CTGTTTCCTCTGGTTGCAGCACAGGTTTCCAGCTGGAAGGGGAATGGGGACTGTGGGACCTAGAAGAGAGAGGTTTCAGGCTGCCTGACTTCCTTACCACAGACCTTGACAGTGTGAAAAGCCTACACCTCCCCCATGAGCTCAACACGTTGACAGTGTCTCTGGGTGGCAATGGGAGAACGGGTTTGGTTTGGTTTTCTCCCAGGCTTCTACTCTCCAGAGAGATTTTAACATTTTTTCTCAGTTCTGCACCTCAGATTTGAATTCTCCATTGTTCTGGGACCAGAGTGCCCCTCAGTCACTGGTTCTGGAGTGAGATCTGCTTATCTTCTGTGGAACAG-ATCTTGGGAAACTGAACTTAGCTTGAGTCTTCCTC---ATCTCATCTCAACCTGGGGTACTTTGAGTGCCACAGGATAAATATGGGGCATCTTTC-TGAAGCATCAGTTTCCCTTGATTCTATTGAGAGGCAAAA--CATTAATGTACTTAGGGATGAAAGTCACGTAGATTTATAAGCGTATACAAGACTTCTCTCTGAAATGAGGCTTGGGTTGTCCTCTTTCTGTTAAATTCCCAGATTTAGCAGAAAGGCTG---------------CCTTCTGCCATGAGGAGACATTGATGTAAAGGTTTGAGAGGTACT--GGTGTACTTTT s mm7.chr2 32295916 756 + 182548267 TGACACAGGGT----------------CTC---------------------TTAGCCCCCGGCTCCGGACGCTCCAATCCAGACCTCCCAGGGCACCT---------GTCTCCAAGGTCCTCGGTCCTGGCCCTGTA----------------------GGCGACTCGGGCGTTGGTAGTAT-------------------------GGAGTGGAATGTAGTTACGTCACAGTCCCCCCTCGAAACTGTCATTACTACTCCGAGTCTGGTTTGGATTGCTCC----ACCTGCTCACCTAA-TGTTGTTGCCCCTTTTCCCGTTT-CTCTGGTGG-AGAACCCATTTCCACCTGGAAGGGAGCCCAAG--TGTGGAATCTAGTGCGGAGACGCTGTAGGCGCCCGCATTCCCTTAACTTAGCATT----AGTG----------------------TGAGCACAACAC--TGTCAGCACCCCTTGCTGACA-----TGGATTGGTTTGGTTTGGATTT-----GGTTGTCTGCTCTCTAGAGAGACTGTAATCTCTCT-----------------------------------------GGAGCAAAACGCAT-----------GTTATAG--------------------TGTTGATCAGTGTCTTGGGGAACTGAACTTAACTTAAAATTCAGCCAGAATGTCTTTTCCAACTGGGGTG--GTGAGAAGCACGGGATGCGGGTGAGGCATCTCACGGGAAACATCACTTTCCCATGCTTCTTTTGAGAGAAAAAAACCATAAAAGTCT---GGTTTGGCATTTTCATAGATTTGTA---------GAGACTTCTCTCTGCGATGA--CAAGGGCTGTGCCCTTTCTG-----TTCCCATGTTCACTAAAGCCGTGGCTTCACGGTTTCTGCCCTTCTGTCATGTTGTAAACTTAGGAAGCAGGTTTAGGAAGTACTGCGGTGTACCTTT a score=4321 s hg17.chr15_random 102998 130 + 784346 CAGTTCCTGCCTACTTAATATTTGCTTTTCTACCTCTGCCTCTGG-TTTTGGTCCCTGGCAGCTGCTGATTTAGGGCAAAATCCCAGAGCTCAGAGTCAGAAGACT-GAGTTTAAGTTCCATTACTGCCTTT s mm7.chr2 32298571 120 + 182548267 CAATTCCTGCCAACTAAATGTTTACTCTCTGGTCTCTACCTTTAGATTTTTCCCTTTGGGAGCTGC------------AAACCCCAGAGCAGGGCATCAGAAGATTTGAGTTTAGATTCCGTGTTTGCCTCT a score=2244 s hg17.chr15_random 103128 99 + 784346 TTTTTCAGCCATGGTATCAATCTCTCTCAGTCACTAAGTGATTGTGACAACATTTCCTACAGT--TGGTGGCATTAAATCAGATG---GTCTATAAGAGTATTT s mm7.chr2 32298797 99 + 182548267 CTTTTTAGCCATGCCAT-----TTCTTCTGCCATTAAGAGGTCATTATTATATCTTGTAGACTCGTGGTACCATTACATGAGACTTACGTACATAAGAGTATTT a score=12074 s hg17.chr15_random 103244 475 + 784346 AGGATGTGACTGTAGGAGCTTGTAGTTCTCATGAGTATCACTGCTCTTCCTTTCCACAGTTGACAGACCATCATCCCCAGACCAACCCTAGTGTTGGTACAGCAGCAAGCGACACCAAAAAGAAGAAAATAAATAATGGCACTAACCCTGAGACAACCACTTCTGGTGGTTGCCACTCGCCTGAGGATGTGAGTCTTGGCTGGCCGGGCTCCTGGGGACAGAGGGCCCAAGGGGTG----GTGGAGGGTAATTGTTAAGATTGTGGAAGAACTGCCAGGTACTGGCTAAGAATTctgg------------------------------------------------------------------------------------------------gtttgaatcctacccctccatctgctagggacatga----tttagcgcaaattgcttgagctctttgggcctctcttttcacatccgtaaaatacgagtggtattgttttccttacgtttgtgaagtttaaatgagatTTGTCATTG-TGTTTTTATGTTAAT--CCCTCGTCCAGGACCTGCTGTAA s mm7.chr2 32299348 564 + 182548267 AGGCTGTGAGTGTGAG-GCAGATGGCTCTCATT--TCTCTCTGTTCT-CCTTTCCACAGCTGAGAGAGTATCAGCAGAAGAACAGCCCGGGTGTTCCTGCAGGAGCAAAG------AAGAAGAAAAAGATTAAAAATGGCCATAGCCCAGAGAGACCCACTGCCAGTGACTGTCAGTCACCAGAGAATGTGAGTCTTGGCCAACAGAG-TCCTGTGGAATGGGGGCAGGTGGGAAGAAGCGGGGAGGGCTGTGGTTCAAGT------GGAAATGTCAGGTGCTGGTTAAAAAGTCTGGCTTTGAGGGCTTGTTGCCTAGTTCAATGGTAATGAACTAGGGCTCATCTCACAATGGCCCTGGGTTTTATCTCAGCACAGGAAAAATTaaatctgagtctgaattctatctctccatcagttggcaatatgataactttagggcaagttggttaaactctctgagcctctttttacatagctgtacaatagcggtaatatt-tttaatgtgtatctataaagattaagtgaagtTTATTGCGGTTGTTTTTCTATTAATTCCCCTAGTGGAGGGTCTGCTGTGG a score=38833 s hg17.chr15_random 103719 2088 + 784346 ACTCTCCTTCTTGGGCTTGCGTTTCCTGA-GGTAGAGTTAGAGAGTATCAGAGGTTTCTGTTAGCTCTGAGAGCCCGAGAGTTA-AAGGCccactagaatggaaacctcggggccaagggctcctgtctgccttttctgacctctattcccgctgtgaagaaccgtccctggcccgtatgtgctcaacgtttgctgagtgaatgCACCTTTCTAAATCACAAGCTGGCGGAAGGGTGGGC--TTTTCTCGCACTCCACCTCTGAAGGTTTCT---GTTACTGTCTTTTCAAGAGAATCTAGTTTCAGACTTTGAGTTCTGTGGCTGTGGGCAAAAACCAAAAAGACCCAAATCCTTCTTCTTTGGGAG-TTGAGGAGAGTTGACCAGTTCATGTTCCCAT-TGGGTCTGAGAACTGTGCCTTTTAAATCCATTCCTGGCCCCTGCCTATCGCTTCCTGGCCTGGGGAATAGAGTCAAGGGGGCCACCCTCAGTCACCTTCCTTTGACTCTCCCCACAGAAACAATAGAACCGAGC---------TCAGCTGGAAGAAGTAGTGTGAT---TTCTTTGCTCACGA----CATGACCGCTGGG--TTTGGGGGCACTCAGATGTAGAGGCCCCAGGCTCATCTCACCCACTCCCAGCCTGGGGAAGAAGGCTCACCCC-CAAGATTCCACCCCATCCCCACAGGGTCCCTGATAAACTGGTCCCATGGGTGGGCCTGTTCTGGGGCAGTGGTGCCATTCTGGGGGCATGTCTCTTGCTGTGGATCTCTGCCTCCCCCTAGTAAGAGCTCTGTTTTCCTCTTTCTATAGGAACAGAAGGC----------AAGCCACCAAC--ATCAGGAAGCCCTAAGGAGGGAGCTAGAGGTGAGTGGAGGGTGTGAAGTTCCCTCCTGCCCTCTGGAGAATGTTTCTTTGCTTCTCTTTCAGCATTTGCTTGTCTTTTCTCCCAAAGGCCCAGGTTCATACCATACGAATCCTTACATGTCAGAAAACTGAGCTTCAGATGGCACTCTACTACAGCCAGCATGCTGTCAAGCAGTTGGAAGGTGGGAATCTGGCACCCCATCATCCTTCAACCTGGCACTTTGACAGGCCTTTAGGGGGAGTCCTTTGGGCCACATCTGAATGTCTCTCATTCCAGGAGAGGCCAGGGATCTGATCAGCCGCCTGCATGATTCATGGAAGTTTGCAGGAGAGTTAGAGCAGGCTCTCTCTGCTGTCGCTACACAGAAGAAGAAGGCGGATAGGGTGAGTCCAAACACGGCCCCGTCCCTTGGGAGCCCAGCTTCGCAGATGGAGGAGTGAGCCTAAAGGTCCCTTCTGTAGGATGGAGTGTCCTGCCCAGAAGGCAGCATGGCCATTTCTTGCTGCTTTTG-TGTGTGGTTGTTAGAGGCAGACT-GGGGCTGAGTCGGCTGTTGTGGGTGAGTTGGGGAGCACTGTGAGGAGCGAGCACTGGACATAGAGCTCAGAGGCCAAGTGCCCGCCCTGCCCATAC---TTGGCTGTGGCCTTGGCCAAGTCCTAAGTGGCGGTTAGGGTACTTGTACCATAAAGGTACAGAAGAGTATCTTGAGTATGTTATTATTTGTGTGGAGAGAGGGGGCAGGTGTATATGTGTGTGTGTGTACGTATTATGGTAACATACATAAAACACGTTTGTAAGGATTCATTAAAAAACTCAGGATAGAGGCACAGTGTTGGGGGGAGATATTTC----CCTTCTGGACTTTCTGAGTTTTGGACTATGCGAACGTATCATCCTTTCAAAAATTCAACAAAGGATTAATTTCCTCCTTCTTAACTGTGCCCCTACCTCcagcggaagaatgggcttagagaatcagatatagctgggtgttgaaatcccagct--------ccaagtgatcttagg-cagcacttaacctttaataccgcatgtttttcatctacacaatagaggtaataatggtaaccatctcctatggaggt-tgtgaggattaaatgggattgttagc-atagtgcctggtgaagcactcaataaaggttcgaacagtggtagtactaACAGTAATAGCAATAACAATATTATCTGATCGCTCTGGGCCC-CTGTTAGCCAGCCCTAAAT-TCAATCTCTT s mm7.chr2 32305481 1875 + 182548267 ACACCACTCCCTGGGTTTGAGTTTCCTGTTAGCAGATTTGGAGTGGGTCAGAGACCTCTGTCTACTCTGAAGAGGCAAGAGTTGGAAAGCTCATT------GACTCATCAGAAACAAGTGCTCTCCCATTCATCTCTTGGT---TGTGCCCAC----AAGA-----------------CACGCTCA--GTTT--TAATTCGACACACTCTGCCAAGTCCCAAGTTGGCAGA-GGGTAGTCATCTTTCTCACACTT-----------GTTTCTAGAGTTACTCTCCTTTACTGTGAACCCAGTTGCACA--------------GTTGTGAGTGAGAGGCAGGGAGAATAAA-------TACCCTGGGAGCTTGAGGAA--TTGGTTAGCTCATGGACCCATGTGGCTCTGAGCACCTT---TCTCAAATCCAT------------CCTCCCGTTC---GGTCTGGGGTGTCATG--AAAGGGGCCAGGCCTAGTCCGCTTCCTTTGACTCTTCCCACAGAAACAACAGAACCAAGACACTCTGGATCAACTGGAGAAAGTAATGTGATAGATTCTATGTTCGCTCTTTTCATGACTGATGGGGGTTGGGGAGACCTCAGAGGTGCAGGCTTCGG-----TCTTGCTTTCTTCTATCCTGGAGAAGA---CTCACCCCACAGGGTGTC-------CTCCATAGGATCTTTGATAACCTGACCTCATGG-TGTGCCTGTCCTGGTGTCTT--TGTCTTTCTGGGGGCTCGTCCCTTG--GGCCACCCCTGCTTCCCC--ACTAAGAGCTGTACTTCCTTGTGCCTGCAGGAGAAGAAGGATTATCAGCAGAAGCTGGCAAAGGAGCAGGGCTCTCTCAGGGAACAGCTGCAGGTGAGAGG--TCTGGGCAGTGTCCCCGAGTTCTCTGGAGAGTGTTGCTCTCCCT-TCTCTCAGCATTGG--TGGCCTTTTCTCCAAAGGTTCACATTCAGACCATAGGCATCCTGGTGTCTGAGAAGGCAGAATTACAGACGGCCCTGGCCCACACTCAGCAAGCAGCCAGGCAGAAAGCAGGTAAGG-CCTGGGAACCCTTCCGCCTGTA--CTGATGCTGCGGCGGGCCC-------GAG-------GGCTCCATCTGGACCTCTCTTGTTCCAGGAGAGTCGGAGGATCTTGCCAGCCGACTACAGTCCTCCCGACAGCGTGTGGGAGAGCTGGAGCGGACACTGTCTACCGTGTCAACGCAACAGAAACAGGCAGACAGGGTAAGACAGGTCGATTCTCTGGCCATCAG-----CAGCTTC-CTGGTGGA-CAGTGAGCCTGAAGGGCTTTGCTGCATGGCCGGGTGTCT--CACAGCATACACCAC-GCCAATTCTTGCTGCTTTTGTTGTGTGGTTGGTAAAAGCAACCTGGGGGATGGGTACCCTGC--TGGGTAACTGGGG----ACTGT-ATAAACAAGCACTGAATGCAACACCTAAAGG-CAGGTGCCTGCTGTGACCCTGCTGTTTGTCTGTGGCCTTGACCAAGTGCTAAGTGATGGGATGGGTGCTCATCTCTGAACAG-----------ATCTTCAG-ATGGTGCCATTTGTGGAGGGAGAAGA-----------ATGTGCGTGT--------------GCAGTGTATGCAAATCATGTCTGAGAGGATTGGT----AAACTTGGG---------------TGGGGAGGGTGACTGAATGGCCATCTG----TTCAGAG-------------GAGAGCAAGACTGAGATAGAAGTTAAATAAGAGA--AGTATCCTCC-GCTTATCTGCAGCCCC--------caggggaaagggcctagagagttagacacc-cgaaatgttcaagtctcagctctgttgacctaagtgatttcaggccagcacgtagacttt------gtgtgctgtt--tctgcccagtgtggg---tgatggcaactgt----tctagatgtgtatgaagattgcatgggattattagcaacagtgcctggt-aagtgctcagtg-----------------------aacaataTTAACAACACCAGTGGTGTCCAAGAGTTCCTGGCCCAATGCTAGCCTGCTGTAAATGTCAATTTTTT a score=7099 s hg17.chr15_random 106212 195 + 784346 AGGTGTGATTGAGAGTGAGGAAGTGTTACTGTGGAGTAGTCACTGTAGCAGTTGTTCCTGGTCGT-CCAGCTACTGCTGT-GCCTGCTCTATCCTGACTTAACCTTTCTCTATTTGCAGTACATTGAGGAGTTAACAAAGGAGAGGGACGCCCTGAGTCTGGAACTGTACAGGAACACGTAGGATGGGGGAAGGTGG s mm7.chr2 32308883 189 + 182548267 AAATGTGATTAGGAA-GAGGAAATGTCACTTTGGAATA-TGACCGTGGCCATTGGT----GTTGTGCCAGCTGCTGCTTCAGCCTGCCAGGTCCAGACTCA-TCTTTCTCTTTCTGCAGTATAACAAGGACCTAACCAAAGAGCGGGATGCCCTCAAGCTGGAGCTGTATAAGAACAGGTAAGA-GTGGGAAGGAGg a score=11016 s hg17.chr15_random 106465 514 + 784346 TGAGTGTGGGGAGAGG--------CTCATACATGTTTTCATGTGTGCACACGGAAgctctagtgctggctgtgccactgactcatggggtagcctcaggcaactcatgtcttctctctggcctgccacctgggacttttaattcctggggtcccttccagcgccacggttctgtggttGTGGGGCGAGGGTAGGGGGTCAATCACCAAAGTGGTCTTTTATGTTCTTCATTCATTCCTTTCTCTACTGCCTCTGGCCATAGCATAACTGATGAGGAGCTGAAGGAGAAAAATGCCAAACTACAAGAAAAACTTCAACTTGTAGAATCTGAAAAGTCTGAGATCCAGCTCAACGTAAAGGAGCTAAAAAGGAAACTGGAGAGGGCCAAGCTCCTGCTGCCACAGGTGAGCAGCTGCAGCCCCGGGGGTTGTGGGAGACCCATCCAG----CTGGGACCATGGTCTAGGGATCATGCAGGGTATGGGGAGGCTCCAGCCAAGAGCTGGAAAATTTGGGTCCTTGTTCT s mm7.chr2 32309232 461 + 182548267 TCAGTGTGGagagtggagacttagccgagacaggtttgggtctgtgtagagctgtgctctggtcccagcaatgctcctgactcatgctgtggccccaggtaactcag----tctctctg---------------------agtcctg------cttt----------GCCCTGTGGCTGTGTGGCAAGGCTCATGCATCACTCTGAAATGTGTTCCTTTCTGTTCTTGGCTCCTTCCTTTCTGCTTTGCCTCTAACCACAGCAAAAGCAATGAGGACCTGAGGCAGCAGAACTCAGAACTGGAAGAGAAACTCCGAGTCCTGGTGGCAGAGAAAGCAGCTGCACAGTTGGGGGTGGAGGAGCTGCAGAAGAAGTTAGAGATGTCAGAGCTGCTGCTGCAGCAGGTGAG-AGGTGCAGCC-----------------CTCACCCCGAGGCCCAGGCACACAGTCTCTGGTTCCT------TGGGGGTGACCTGCAGCCAAATGCTGGACAGTTTAGAACCTCCTCCT a score=951 s hg17.chr15_random 106979 123 + 784346 GGTCCCGCCATAGAATCCTCTAGAGTGTACTAAAAATGTACAA-ATTGGGGCCCTGCCTGGGGAATCAGAATCTCAAGAGTTAGGGCTTAAAAATATT--TTTTTAAAGGATCATGGATGAAAACC s mm7.chr2 38981940 110 + 182548267 GGTTCTGTGATAGAATTCTCCGG---------TAATTGTTCAACAGTAGAGCCTTGACCACATAGTGAGGGT-------GATGTGACTGCTACATTTTCATTTTTGAAGTGTCCTGACTGAataca a score=6069 s hg17.chr15_random 107515 183 + 784346 AGCAGCTGCAGGCGGAGGCTGACCACCTGGGTAAGGAGCTGCAGAGTGTGTCAGCAAAGCTCCAAGCCCAGGTGGAAGAGAACGAGTTGTGGAACCGCCTGAACCAGCAACaggaggagaagatgtggaggcaggaggagaagatacaggagtgggaggagaagatacaggagcaggaggaga s mm7.chr2 32310942 183 + 182548267 AGCAGCTGCAGGGAGAGGTCGAGCAGCTGCACAAGGAACTGGAGAGGCTGACGGGACAGCTACGGGCTCAGGTGCAGGACAATGAGAGCCTGAGCCACCTCAACCGGGAGCAGGAGGGGCGTCTGCTGGAGCTGGAGCGGGAGGCCCAGCGCTGGAGCGAGCAGGCCGAGGAGCGCAAGCAGA a score=2800 s hg17.chr15_random 108710 102 + 784346 GCGGCAGCAGGAGGAGAAGATGCAGGAACACCAGGT---GAGGCTGCAGGAGCTGGAGGAGAGGCTGGGGAAGCTGGGGCAGAAGGCCGAGC---TCTTGGGGGGAGC s mm7.chr2 32311481 108 + 182548267 GCTGCAGTCAGAGCAGCATGTCAAGAAAGAGCTAGCCCGGAAGCTGGGAGAGCTGCAGGAGAGACTGGGAGAGCTGAAGGAGACGGTAAGGCCTACCACGGGGGGTGC a score=11786 s hg17.chr15_random 109095 244 + 784346 AGCCACTACCTACCCTGACGCCTATCCTGCAGGTGGAGCTGAAGAGCCAAGAGGCT--GAGTCTGCAGCAGCAGCGAGACCATTACCTGGGTCACCTGCAGCAGTACG---------------------TGGCCGCCTATCAGCAGCTGGCCTCTGAGAAGGAGGCACTGC----------------------------------CCAGCTGCAGCAGCAGGAAGCTCAGGGCGAAGCGGTGGCCGAGATGGCCCACCAATAGTTGCAGGAGACCCGGTTGAGGGAGTTGATGAGGGCGGG s mm7.chr2 32311912 301 + 182548267 AGGCACTGCCCTCATTCCTGGCCGTCCTGCAGGTGGAGCTCAAGAGCCAAGAAGCACAGGGTCTACAGGAGCAGCGAGACCAGTGCCTGTCCCACCTGCAGCAGTACGCTGCTGCTTACCAACAGCACTTGGCGGCCTATGAGCAGCTGACCTCTGAGAAGGAGGCAATACACAAGCAGCTTCTGCTGCAGACTCAGCTCATGGACCAGCTGCAGCATGAGGAGGTACAGGGCAAGATGGCAGCCGAGCTGGCCCGCCAGGAGCTGCAGGAGGCCCAGGTGAGGCAGCTGTTAAGGCTGGG a score=27016 s hg17.chr15_random 117003 911 + 784346 AGAGTTGCTATTATACCACTT-------CAAGTGGATGGAGAGCCTCCCTGCCATCCATTAATGTGCATTAATCATTTTGAGAGTGAAAAGATTTTTTAAAATGTTTTTACTCTTTTAGGTATGGCCAAGTGAGATGGGGCTAGTGAAATGGGTGGGAGAATTGGAAGCTGATAGTGTGTGAGCTAGACACCCATGAATGCTTTTCCACTGGGCAGTTAGAGGGATGA-TAGGTAATAATATAAGGCAGCTCCATCACACAAGCTG---GTGACTCCTGTGCGACAGACCAAGAGCTGCATTTGGAGATT-CATTTCCGATTGTTGCGTTTCCT-CTTAGAGCATTGCTTGGTCATCGTGTTCTGAGTGGTCCATTGGCCTCCATGTCCCTTTTGGGGTGGATATTTGCTCAGTGACTTTTGAGCAGCTGGATCTCCTGCTTCGGCAGGTGAGTGAGGGGATGGATGGCTCCGCGGACTGGCCCCCGCCCCAGGAGAAAGAGTGCGTGGCCGTGGCAACGCTGAATCTTCCCCGACTTCAGGTATTCGTGATTTCCCTTCCTCTTGCTCCTTTTATAAGTGTCTTAGCGATTTGTAAGAAGGTTTATGTATTTTGAAGGACATAGGTTTTAGCCTGTTGG--------------------GGGAAGTATTTTAAAGTAAGATTGTAATGCACTAATAATGGACGCAAGGCTTAAA---AAACTTGATCTGTTTATTTTATGTTTGTCCTGGAAGTCAGCCTCGGCATGCAGG-AAGAGTGTATATGGATTGTGTTATTTTTGCTATAATCATTAGTTTGTTGGTATTCTTACTGTTTTACTGTTGTTGCGTGTGGAGAAATGACTGGGTGAGATCACAGGTGATGGAGAGAGACAGCGCTCAGCTGAGAGACCAGTGCTGGCCTGTCTCTCCTCTGTCCTGTGAAAAC s mm7.chr7 52350858 891 + 141766352 AAGGTTGTGTATACACTACTTAGAGCTGTAAGTTGGTTGTGTGC-TCACTCCCAGCCATTAGTATAGATTAGTAATTTTGTGAATGAAAACATTTTTGAAAACACTCCATTTTTTTTAGGTGTGG--AAGTGAGGTGGGA-TGGTGAAATAGGAGAGGAAATTAGA----GATAGTTTATAAGCTAGA-AGGCATGAAT---------TTGGGGGTGTAGAGGGATGAGTAAGTGGTAACATGGGGTATTTCC-TCACACTAAGTGTAAGTGTCTTCAGTGGATGAGACTACT-GATGAACCTACAGATTTCATGTTAGGTTCCTTTTTTCCTTGCACAGAGCTTTGCGTGGTCATCTTGTTCTGAGTGGTCCATTGGCCTTCGTGTCCCTTTTGTAGTGGACATCTGCTCAATGACGTTTGAGCAGCTGGATCTCCTGCTGCGTCAGGTCAGTGAGGGGATGGACGGCACTGCTGACTGGCCCCCACCACAAGAGAAGGAGTGCATGGCTGTGGCAACGCTGAACCTTCTGCGACTGCAGGTGCTAATTTTTTTTGCTGGTTTCCTGTCCTTTATGAATGCCTCAGGCATTCCTGAGTGTATTCATGGGCATTGAATG-TGTGAACTTCACCCTATTCACTGAATTGATAATAAAACCTTGAAAGTATTTTAAAATAAGATTACGATG------------------GGGTTACGTGTATACTTGATCT-----TGTTTTGTTTTTCCGAGAAGTCAGTCATTGCATATAGGTAAGAGTATGTACAGAATCAGTTCTTTCTGCCATAAGCAC---CTTCCTGACATTCATG------TGCGGAGAGTGTGTATGGAGAAATGCC----CGAGACAGTAGAAGAAAGAGAGGGGTAAACTCCAGTTGACAGACCATTGTCCCCTGGATTGTTTTTTAGACTGTGAAAGC a score=2155 s hg17.chr15_random 118130 47 + 784346 TCTACTCAGTAAGCTCGGCTCCCAAAGCAATACCTTCCTTTCCTCAC s mm7.chr7 52351749 47 + 141766352 TGTATTCAGTAATTTGGCTCCCTACATCAGTACCTTCTCTTCCTCAC a score=5854 s hg17.chr15_random 118633 480 + 784346 GTCGAGGTGTCCC-AGCGTATGGTTTTGCATTTGCCTCTCCGGGGTCCTGAAGGTTCTGTAGGTTTCACAGACTCCAGGTGAGTTTCGGTGGTCATTTCCTGACCTGTGATATCTATACCTAGATGAGTGGTGTGCTTTTGATTTCACTTCTACTCACAGGGCAAGGCCGGGTCTCTGATTTCTCATGGGGCCTCTTGCTACCCAGAGCCTGGGACGGGCAGTGTGTTGCCCCCTGGCTGCGGTTGGCTGGCAGGCAGGTGATCCTGAGTGGCTCCCAGCCTTCTGCAGGAAGCTCGGGTTCAGTGGGTCCTTGTG--------------TGCATTCCCGTG---TGGGAGGTTGTGCTGAAGCCTGGCGGCTTGGCTCTGCTTTCAGAGCCCGGAACCTCTTGACTCCTGCTGTGTGTGCCCACGTGAATTTTGGTTTTGCACTTGAGGAGTTTCCCTGTGTACTCTCAGCTCCGCAGTCTAATTTTTAGCAGCTCt s mm7.chr7 52354358 424 + 141766352 GTCAAGGTGACCCTAGAAGCCAGTATTGATTTTG--TTTCCGTTGTGTTGTAGG--------GTTTTACATGCTGTAG-TGGGATCAGGTGCTCATTT--TGACCTGTGATATTTGTGCTTAGATGGGCAGTAGACTGTT-ATCTTGTAGCTACTCAGAAGGT-AGGCTGGCTCCCTGGTTTCTTGTG-----------CACTAGAAACTTTGCATATGAATAGTGCAGCACTCTGTC-----------------------ACACTA---GGCTGTCAGATTTCTAGGGAAAGCTCAGGTTTAGCAGGTGGTTGTGAGGAGCTTGGGAGCTGCTCTTCTGGTCACTGGATGGCTGCTCTAAAGGCCAGC--CTGAGCCCTGCTTTTTAAGGCA----------GACTCCTGCCTTGTCAGTGTACTTG---------TTTTTCTCTGAGGACTTTGCTTGTGTGCTGT-AGTTTGGTTATCTAGTTTTAAACTGCGGT a score=3508 s hg17.chr15_random 119389 197 + 784346 TGGTTACATTGTAGCCATTATTTCTGTGTTTGGTGCAGATTGTTGGGG--CGGGGTGGAGGTTGCTGTTGCTAGTTGTTTAGCTCTTC-TGCTCATCTTGAGCTTTTCCATATATGTGTTCATAGTGGGGTTAAAAAAAATTCCTCTAGAAAATACTT----------------CAACTATTGTGGGTAAGAGTTTTTTTAGTCCAGTTTTTAAAA s mm7.chr7 52354782 201 + 141766352 TGGTTCCA--------GGCATTTTTCTGTTGGATATAGACTGTTGGGGATTGCACTGATAGTTGCTGTTCTACATTATTTAGTCCTTTGTGCTGATCTTGTA-TTTTGCAGTTGCATAGTCAAAGCTGGGT--AAGACATTGTTTTTGTAAAGTACTTTCACAGTGATATTTCCCAGCTATAGTGGTTAAAAA--TTTTTAGT--AGTTTTAAAAA a score=40064 s hg17.chr15_random 119588 1087 + 784346 ACGTAAACTGAGAAGTTATTTTGTCTATTTAGATAATACTTCAAATTGACTTTTATTCAGTGTTTAATAAGACTTTG---AAATTCACTCATTTTTAGGGGTTCTAAGTGAAAATTGTTTTTCTCCTTTCAGTTGCATGCTGCCATTAGTCACCAGGTTGACCTGGAATTCCTTGGTTTAGGTCTGGGCAGCGTCTTCCTGAACAGCCTGAAGCAGAAGGTGGTGACCCTGGCAAGCAGCGCAGACGTGCTGAGCACCGTGCAGTCGGCCTCCCAGGCCATGCTGCAGAGCGGCTGGTCCATGCTGTTGCCCACCGCTGAGAAGCAGGCCCGGGCACTCT--GCTCTCCTGTCCTGCGGAGGTGGGCTCGGGGAAGGAACAGGAGAGGGCATGGGTCAGGGTGCTGGGAG------GGGATGGCGTTTCACTCAAATTG---------------------------GCACACACTTTCTATTTCAGTTTCAGGCAATGAAGTGAGCATAAGTCCAGGTCATCGATTGGTGATTGATCTTCTGGTGGGCAGCTTGATGGCTGATGGAGGGTTGGAGTCAGCCTTACACGCAGCCATTACTGCAGAGATCCAGGTATGGCCTTGGAGGCACA-----------------CGTGACCTGGTGGTGGGCTGAGATCGGAAATACCACACTCACACA-----TGTGAAGAATAACTGAAAACAGTAAAACACTAAACTTATATCCAAGTATTT------TTTTAAAT-TAAAATTCTT--TTATGTGCTAATTTTAAAAAT-------TATTGAGATGATTTGTGATAAAAT-ACTGCATGT----TGTCTGTTTCAGTGAAGTTAACAGGTAACCTGTTCCTCatgtagaccattcccgtcacccggaaagatcgctgtgctccttggcacttgcagccaggatactcccctgccctgagattagattcatttttcctgctctgagtgtcgcagcaatataactgtatagtatgcactctttcctgctttgccttggagaatgattttcagattcgctcactgttgtgtgtattgcgacttcgtttttattattgggaagttttcca----ttttataggtg--tagtactgtttgttagttcattctcctattgaaggacatgtaattgtttttggt s mm7.chr7 52355409 1125 + 141766352 ACTTGAACTGAAAAGTTAATTT---TGTTTATATAAAATTTCAATTTAAACTTTATTCAGTCTTTCATTAGCATTTGGAAAAATACATTTGCTTTTGGATGTTCTAAAT-AATTTTTTTTTTCTTTTTATAGTTGCATGCTGCCATTAGTCACCAGGTTGACCCGGAATTCCTTGGTTTAGGTCTGGGCAGTGTGCTCCTGAACAGCCTGAAGCAGACCGTGGTGACCCTGGCCAGCAGTGCAGGAGTGCTGAGCACTGTGCAGTCAGCTGCCCAGGCTGTACTACAGAGCGGCTGGTCTGTGCTGCTGCCCACAGCTGAGGAGCGGGCCAGGGCACTCTCAGCACTCTTGCCCTGCACAGGTGAGCTTTTGTTAGGTGAAGAATTGGGCACAGACAGGAACGTGGGAAGGAATGTGGGATGGCACTT-ATCCACATTGCTAAAAACAAACGGCAAACTTAACAGAGCAAAACCTTCTTTTTTCAGTTTCAGGCAATGAAGTGAATATAAGTCCAGGTCGTCGATTCATGATTGATCTTTTAGTTGGCAGCTTGATGGCTGATGGAGGATTGGAGTCAGCTTTAAATGCAGCCATTACTGCAGAAATTCAGGTATGGCCCTAGAAGTACAGAGGAGTCAATGAGTGCTTTTACTTAGTGTATGGTTGCGATTGAAAACTCTGTACTCGGACATTATTTAGGAATCGTGACTATAATCGTTGAAGAACCCAAAATGTA---AAAAATTTAAAGAACCCAAAATGTAAAAATTTTAGTTACATACAAATTTTTAAAATTTAAAACTCTTGCTtttatttgtgataaaatgatcccaccttaagtgtctactttgatgattttgacag---atccttccatcacatagattattttcatcaccctggaagatccttatgtccctttgcattt------aggctactcccctgcctgtagattg-----------tctgccctgaatgtcatgtaaatggcacagta-ggta-gtaatacctcttcttttgcctgaattgatggtttttgtatttaaccacatcacagtttgttactactttgttcttatgattgagaattttttcatgctttttattgttgaaaagtact------------------ccattgaatg-cttgtaacacttgttggt a score=3670 s hg17.chr15_random 120979 295 + 784346 gctttctggtttttgg----ccgtg-----tagagctgccacaattgtgctgtgaacaagta---------ctttagtgaacatatgttctccctttggataaacacttggagtggaatttgttaggtcctggggttagtgtgtgttcatagtttcccaaagtggctttgccatttgcatttgaaccaggacttgtgtgtgagaattctagctccttcttgtccttacAGAGCAGCTGGATGCTGCGTGTGTGGAGCCGATCACATTGGGTTTTGTGTGAGCCATTAGCAGGGTTAAGGATTTTAGGGACTTC s mm7.chr7 52356534 277 + 141766352 tgtttatggttttaagtctactgtggtcactagggttattaagttcgtcaggggggaaagtgggtgctaaccctt--tgagcatgtatttttcctgtgactaaatactttgggaggcattagctgagttctaggatgcatgtgtgcttatttatTTCCAGATGAGCTCTGTTTCTTACAATTGAACA------TGTATGTAAGAGCTGCAGCTCTTTCCTGACTC----------------------TGTATGAGTCATAAAATACTTAGTATTGTCAGAATTGCTGGC------AAAGATTTCAGTGTCTTg a score=16605 s hg17.chr15_random 121326 394 + 784346 AAAAAGAAGACACTGTTTGAAACTGCACAAAT---GAGTTGGGGTTTCCAACAGGGCAGGTGGGGGCCTGTGGGTGGATGGGTGTGGCAGCCACAGAGGCTGGGATAGCTTGGCACTGGGGTCAGGGCTCAGCCAGCCTGTGTGCCTTCACACCTGGTAATGAGATCACTTGTAAACAATTTCTG-TTTATCAATTACAGGATACA------AAAAAAGAAGCACGGAAGGAAAAAGAAATTTATGAACAGGAAGCAAATGCCTCAACATTTCATAGAAGGAGGACTCCATTGGATAAAGGCCTTATTAATACGGGGATCTGTGAGTCTTCTGGCAAACAGTGTTTGCCTCTGGTTCAGCTCATACAACAGCTTCTTAGGTAAATCATATTAGCTGTATTGTAT s mm7.chr7 52357034 364 + 141766352 AAAGAGAATAATATATTTAAAACCATAGCAACCAGAAGGTGGAGTTTCTGACAGGGTATACAGGTAGGCATGGTCAGCTGTTTGCATCAGCAGCTGAGGCTCGGACTG-----------------------------CTGTG-----------CTACTGATGAGGTCTCTGTTCACCAGTTTGTGTTTTATGAATTTCAGGATATAGAAGCCAAAAAAGAAGCACAGAAGGAAAAAGAAATTGATGAACAAGAAGCCAGTGCCTCCACATTTCATAGAAGTAGGACTCCTCTGGATAAAGACCTAATTAATACTGGGATCTATGAATCATCTGGCAAACAGTGCTTGCCTCTAGTTCAACTCATACAGCAGCTTCTTAGGTAAATAGTATTAGCTGTGTTGTAT a score=4259 s hg17.chr15_random 122406 151 + 784346 TAGTGAAATCTAGCGCAAGGATCTCAAAAATTTGTTTGATGATTGAAGGAATATTCTGAAAATTACCTAGTATAGA-TGTTAGGATAAAGAGCAGACCCTTTTCAATATAGGTGAGAGGAGAAGT--TGGAGGGTGTGATGATACTCAAaagtt s mm7.chr7 52357427 152 + 141766352 TAGTGAAATCTAACACTAAACCCTGAAGAATGGGTTTAGCTGTGGAAGACTTACTCAAAAGATTATCTAGGATAGAGTTTTAGAGTGAAGAGAAGG--TTTTTAAACATGGCTAAAAGGAGAGGCTATGGAGAAGTTTGTAACACTTTACAATT a score=4417 s hg17.chr15_random 122709 218 + 784346 ACTTTGTAAGATAACTTTTCTTTTCAAAACTGAAGTCAATGTGATAGAATGGTGAGCATTATTTTGGAAGGCCAGACTAGGAGGAGGTGGGAGGAAGAAGTCAGACTCAGCCTGTGAACAGACGCTAACCTTGGCAGAAGCCAAAACAGTCAGACAGTGTTGTCTAAAAATGATCATTCAAGAAGAGCGAAACAGCAAGGTGATTTGTGAAAGAGATT s mm7.chr7 52357960 191 + 141766352 AACTTACAAGATAAGTTTTAATTT--AAATTAAAAATGTAATGAAAGAATAGTGAGCGGTTCTTTGGAAAGTCAGTTTCAGGTGTAGT--AAGGATGAAATGA-ACTCAGACTGTCATCAAA-GTTAACCTGGGGAAGGGTCGA---AGCCAGACATATTTGGATAAAGAAGATAATTCAAAAAG------------------TCAGTGAAAGAAATC a score=1357 s hg17.chr15_random 122939 88 + 784346 AAACACATTTATACC--TCTGTTCAATAAAAATCTGCTTTTCGTCAACTGATGCTCCTGGTTTTTGTTTCTACACATAGAGAAAGCAGAG s mm7.chr7 52358312 79 + 141766352 AATCACATTCTTAACATTCTGTTTTCTGAATCTAGGCTCTTTGTTTATT-ATGCTTTCAGTTTTGG----------GAGAGGAGGCAAAG a score=10165 s hg17.chr15_random 125341 382 + 784346 GTGTCCCTCTCCTGCATGGGTAGACACTGTTTTCTCACCTTAAGTGTTTGTGAGTGAAGGATTCTTGATGTGTTGACTTGGCAGATGCAGTTGTTGAACAGTAGTTTATCTAAAGATCGTAAGAGACTTTTGGAGACATTTCATGTCCTTTTTTCCCTTGGAAAACGTGGGTTGGAGAAATCGCTGCTTGCCAAAAATAAGCCGTGAAATGTATTTCAGAGTAGATCGTTATTTACATGCTGGCGAGGAGCCACAGAATACCATTTACATTTGAAAAT-AGAGCGCTGCGAAGTTTTTATAAGTAGTGAATCCCATCAGAATTACACATTTTGATTATGGCTCtaaattttatatt-----aaataaactaaaaatttCATTGTATTG s mm7.chr7 52362045 361 + 141766352 ATGTGCCATTTTTATATGAATAGACATTTTGTTCTTCCAGTAA-------TGATCAGAAGATACTTA---TATTGACTTGATTAGTTCAGTTTTTACAAAATAGT----CTAAAAAT-ATAAGAGAACCT-AGAAACATTTCCTGTCATTTATTTCTTTA-AAAATGGGAGTTGATGAAATTGATCCTTGCTAAAAATAA--TGAAGAACAGGTTTCAGACTGATTCTTGAGTT-TTTGCTGGC-AGGCACTACAGAATATTATTTACATGTGAAAATAAAAGAGTCCTGATGTTTTTGTAATAAATGAACTCT------ATTACACATTCTGATTATGGATCTGAACTTTGTAATAAAGGAAATAAACTAAATTTTTTATACCATTA a score=3755 s hg17.chr15_random 125725 297 + 784346 TTACCGTCTCTTGCTCCTTCAGGTGTAGCATACATGCTAGATTCTAGACCTGTTTCTTGTGTTACAGTGGTGTTATCCAGGCAGGGTATCATGTAGTGA-------AGGTGATGTCGAGTGGTGGTGGTGAGCCCAGTGAAGGCGCATCCTTGCCGTGTGTGATGAGGGCCTGTGGGTTGCTATG----------------------------GGATTCCC----CAACCCTGGCTCCTC---TGTCTCCTGC--TTCTGTCCTTACTCACACTGCTGGTAGTTTTCTGGTGTGAGACACGGGGGCAAGTGGGATTGACA--------------AGCCTGCTGTCACATTAGGAA s mm7.chr7 52362580 331 + 141766352 TCGCCAGCTCCACCCCACTGAGATGTATCTTGATTGTGAAATTCTAGACCTATTTCTTCTGTTGCA-TG--GTTGTCAGGGCTACTTACCAGGTAGTGAGCTTGCCAGGGGAGGTCAAA-------GGGGACCTCACTATGTGT---TCCTTGTAATGTGTGATCAGG----GTGAGTTCCTATACCTTAGCAAATATTACAGTGTATAAGTTAAATTACTGTAGGAGCCCTGGCTACTCAATTTTTTCTTACTGTCCTGTCTTCATTCACATTGTTCAAAGTTTT---GTATCAACCACAGT----ATAGAAACTATCAATATTTTTTTCAATAGTCTGCTGTTACAGTAGGAA a score=5471 s hg17.chr15_random 126255 214 + 784346 ctAGCATCCTTTCAAGTACTGGGGTACACCCAAGCTCCCAGCTTCTAGCTAGGAGTCATTTTGTCCCTCTTTATCCCAAAGGACTTGCCACCATCTTTGGTTCCCAAAGCCCAGGAGGGTCCAGGCTCTTCAGCCTCCAACCACTTTGCATTTCTTGTCTGCTTTTCGTTCATGGAGATAATTAACTTATTTTTCAGCCTGGGCATGTCTTTTT s mm7.chr9 68748438 195 - 123828236 CCAGCATCCTGTCGAGGACTGGGGT--------GATTTCTGGCTCTTACCAAGGGTCTGCTAGTTCCACTTTATGTGAAAGGACCTACCCTTGCCTTTAGCTTCCAAAGCCCCACAGGTCACAGGCTTT--GGCTTTC--------TACATCTCTTTCCCGGTTTGGGTTCAGGGAGAAGACGAACTTATTTT-CAGTCCTGTTAGGTCTGTGG a score=23422 s hg17.chr15_random 126783 2800 + 784346 ATTTACTTTGTATATCTCATCTATTACTGCTGCAGTTTGCAGAAGAGAGGATGCCCTCAAACCTAACTTCTCCAAACCATCCCAAATGGGAAGTCTGCTCCACGTCAACAGCAT------------------TGTTGCTTTTAAAGACTATACGTCAACATGCCAGATTATAGCAAAAGGATGTCGAGGGAGCAATAGGAAAGCAAGCCTGAGAGTCCTGGAGAGAAGGTGGCAGAGCTGCCTTTT----------GAAGGTGGTTCCTTCCTCAGACCCTG----CCCTTCCTGCCTTGTTCCTCCAGTTGCCAGATTT-----------------------GCTGTTGGAGCTCCTCCAC--------GGGCGAAGAGGTGAGGCTGGACTGAGAGGGAGATGGAGAAGCTGCCAGAGATTCTTTTGGATCTAGAATTGAGACAGCA--GTTCCAGCCAGGTCCAGA--------GGTGGGGG----------------------------------CTGTCAC------------CCAGCCCCCAGGGGAATGGTACTGATTGCAGAATGTGGCGAGAACTCCCTGGCTGGGAGAGGGAGGTGCTTGCTCCCTTGAATCACCTGAGCCCAGGCTGGAAGGCCCAAGGGGGAGGA-----CGAGGCCAGCTCACTC-CAGCTCCA--TCCCCTCCCTTTAACCCTAAGCTAGTTAACCCTCCCAGACTCCAGTCCTTTTTCCTAAGTGC----------------CCTCCCTG--------CAAAGTCTGCACCGAGC---AGCGCTCCCTCGCACCA-----------------------GCTCACCC-----TGCACTGTCTTGT--CTTTCAGCAACCCCATGGGTTTGAACTTGAGACG---ATTCATGTTCCTAAAAGCCTCTTTGGGCTGAGGGAAGGCATGGGTGGCTCTGCCAGTTTTGGAGTGGGGGCCGACTCTTCTCAGAGCCGCTGCAAGGGCCA-GGGCCACCCTCCCAGGCGGGTGTCTC--------------TGGGCTGGGCAGCAGCTTTGTAGGCA---------GCCTGGGTCATCCCCACTGGCCTGGGAAGCTGGGGGTGCACCGGCTCCTGCTCCTGATAGGGCCAAGGCACCTTCCTTACCTAAGAGCTGACTTTCTTGAAGAGTGGGCACAGAGGAGCCGGCAACCTGGGCTGTGTAGGCACCCAGGAGAAAATCTGCAGCTCAGTATCA--------GAAGT-CTCCACCAGC-ACGGCTGTTGCAGAGATGGGGAAACTGGGCTG------AGAGGGAAGGGGGCTTGCCCAAATCACCAGCCCT----------GGAATGTTTTGAGCTTTGGGGGTGGATCTCCCAGGAA--ACGTGTTTTTATGGCACCACCGCCTCTGGTCACCCACCCCGAGGTGTGGCGGGCCTGGACAGCCAGCTTGACTGAGGGCCAGGCTGGTGAAGTCAAAACTACCACTCAGGAA---------------GAAGA------CCTAGCCCTTCTCCAGACAGAGTTCA-------AATGTGAGGACTGCCTTCTTTGGGCCTCAAATTCCC---CACGTGAATTCCAAGGACCCCTCTAGCTCCTACACTC------------------TGGGCCAAGGTTTCCTCTGAGCCGCAGTCAGCCTAGAGGACCTAGGATACATCTTCCTTGGACAGAGACCCACCATAGGGGCAGCAGGAGGTAGGGGTGGGGG-TAGGCAAGATTCCTGTGGGGAGGTGGAGCTGTCATCagagatggtgtctgcaggcagtgggtgtatcgtggctctgctactacttgctgggtggccccatgacgtttctttccccactctgacctcagtttccctatctgttccgtggagataagatgcctgcctacataTTTGTGGACTGGGATGTGTGTGGGCCAGTTGCAGTGTTTCTTG-GTGTGGTCCTG--GGGCAGGCTGCACCACCCCATAGagatttctgggccccaccctaggctcacaggaccagaatctctgggaatg-aagcctgggaatttgcatttccacaggcatctggctgattctgaC--ATGACTGAA-AAGCACTAATAGTATATAGCAAGCTCTTTATAAAA-----------------GGTAAATTCATAGCTGCCTTTTACTAAACATA------AATCTCACCTTCCCTTCCTCAGTTAAGGACACACACCGCAGTTGAAAATCACTGTGCCTTTCCAGATGCAGAATCTGACCTTTCCGATAAGATTCTGTTAACTGCTGCTTTCTGCAGTTTGTATTCCAAAACAAGGGGAATATGTTTCCATTTTTTCAATACAAATGTTTAAGTCGGATATGCTTTCTCAAACTGGACACGCACTCACACAGCTTAGGGTTTCAGCTATGGCT-----TCCTCTCAAATTATTAGCCTCT------TTCTGCCAGGGAGCAGTTTTTCCCAGA--------------CAAGACCCTGGACAGAGGTTGGTGGGGCCCTC--------CTCATCAGAATCACTAGATTATGACTGACCCCTAGAGGTGGCTTTTCTGCTTAAGTGTCAGCCCATGGGCTGGGTTGTGACCCCCAAAGCTGCGGCAGAAGCTTCCACCCATCCTGGGCCCCCCCTGCCATCTATGGGGAAAGGCCTGTCCCTTGTCTTCTGGGCCCAGCCGGC-CTCACAGGCATTC--AGCAGATTGGAAAGTCGAAGCATGTGCTGTGCTTGGCTGGGCTCTCCTGCGCCCCTTTTTGGGGTGA---GGTGGAGTGCATCCAGCCCCCAGCATCCCTGCCGTTTATTCCCACCCCTCATCCCCACCCCCATACACACTCACAAGTACAAACACAAGCACAGTCACTGGCACACACCACTCTGGACAGCACCATTTCCAGCCTCAGCGGGGCAGTTTCCTTACAGGG-AAGTTAAT-GAGGCACTAACGAAGGCTCAGGGGACAGGGGGAACCTCTATCGagaagaggctcctagacctggttctgcctctgaattgctgggggtccttgagaaagttgctatccctctctggtctcagtttcctcaggtgagaaatggggggccggccaaatggtctaagg s mm7.chr9 68748633 2709 - 123828236 GTTCACCCTGTG-----AATCTGTTATTGCCGCAGTTTAAGGAGGAGAGGATGTCCTCAGACCTATCTTCTCGGAACCATCCTCAAGG------------CATTTCATCGACTTCTGTGCTTGTTGGTTTGCTTTTGTTTTTAAACTCC-CGTGCCAACATGTCAGATTATAGCAAGAAGAAATCATCGG-------GGAAAGCGA-----------CTGGACTT------------CTGCCTTATTTTTAGGTCCAGAGGTCGTCCCTTCTCCAGGCCAAGTAAGCTCTGTTCACTTTGCCCCTGAAGCTGCTGGGTGCCCCTTAGTTGTCCCAGGTGCAGGGCTGTTTTGACTTGTCCTCTAACTTTAGATCCTGAAACTTAGCGTGGACCACCTAGGAGTGGGAAAGGCTAATGTATGCTTCTTTCAGCC----ACTTAAACTGCCTTGGGTAAGCCAGGCTAAGATTAAGATGGGTGAGGGGGACGCAGCCTGCCCTCTCAGACCCTCCCTTACCCTGTAACTCCACCCCTTCCCCAGTCCCCAAGA----------------CGAATGAGACAAGAGCT------------------AGTCCACCCTCCCGAGTGCCACGCACTACCCGGCT------CCTGAGTGTGAGAAAGTCTCGGGACCA--TCATCCATAGCCACAGGTTCCCCCAGACACACCCTGCTCTGGGT--CTACCCCAAACTCCAGTTCAGTCCTCTAAGTGGGTGGGACCCACAGCAGCTTCCCAGGTGGGGAGCACAGGCTCCATCGGGTCCTAGTGCCGCCGGGCACAGAGAGACTGCCAGCTGGGACAGACGCTCACTCGCGGTTCCATTGTGGGGTGACCGGCAGCCACCC-----GGCCGGCCATGAGGGGTACGCCCCTGCTCCTC---GTCTCTCTGTTC------------------GCTCTGC----TTCAGCCTGGTGA---GTTCTTTTTAGAGAAGGTGGGAGGGACAAGGGTCGCAGTGTGGGAGGAGTGGCCGGACCAGCTGGGGAGTGGGCGGGGCA--AGCCCTATGGGGATGCAGGCTGGCTTGGGTGGG------TGGCCTGTGAGGTTTGGGGTCCCCGCTACCTTATTCC--ATGCTGCCAGGTCACCATCACTGAC--------GAGTGTCTTCAAGC-TGGGCAGTGCAGATCAGTC--CCAGAGCTAAG-AGGTCCCCAAAGGGTCCTCCGAGGCTC--TTTCAACTCTAGTGAAGTGATGAACTTGCTACGG----TATAAATGTGTGGGAGCAAGCCTGCTGTTTGGAGAGAGAGAGGGGTCACCAAGACACTAGCATTCCATATGTGCGAAGTATTTTTGCACTTTGGGGCAGGTCTTCCAGATATCACATATATGGTGGGCACTGCCATAGCTGGTCCCTAACCCTG-------------------------CTTAGCTGAGGGC-AGGTTGATGAACTGGGGTCTGCAGCTCACAAACTTAGCATTGACACTGAAGAGACTCTCTCAGCTCTCCTCC---CCAGGTTCACTCAGACACAGTGAGGGTT----TCTTCCAGACTCAGCTACCCTCCCCCTTAAATTCCAAGGTCCTTCGTAGCTTCTACCCCCACCACCTCAAGCTGTGTGCACACCAGCTTGTCCTCTGAGCTCCAATGGACCCAGAGAACCAAGGCTGCATCTTCCTCCCATAAAGATCACATCCAGAAGGTACTAGAATTAGGAGTGGGGAACAGTCAAGGTCTCC-----------------CAATCAAAG-TAGTGTTGGCA--CAGTA--TGCATTATGGCTTTG-GATCACT-GCTGGGTGCCCCTATTCTGTTACCCTCTC----------TCAAGCTCCTTATCTGTTCCATGACAACAATCCGCCT-------TGCCTGTCATCTGACA---------AACACTGGCAGTATTTCTGAAGTATGGTCCCACTAGGCTGTCTGCACCTTCCTCtacagactcctgaaccccagcctaggctcaggggatctgaacctctggaaatggaagctggggaattggcttttatatagcca----ggtgattctgacctgtgattggagaagcactgATAGCATTTGGTGAGTTCCTTCTAAGACAGCATTCTGAGTTTCTAAGATGCTCACAGCCACCCTTTAGCGAGCACATATCTGCATCTCACAGGCCCCTCCTTCACTAAGCACATGC-CCTCACCTGGCAAGCCCTG---CCCTTCAGATACACA-------CTTGCCAATGAGATTCTGTTAACCGTTGCATCCC-CAG----------------------ATAGCTCTCTATTTCT---------------AGATTGGATATGCTTTCTCAGACTGGACACACAGAGAGACA-CTCACAATTCCA-CTATGGTTAAGAATCCTATCAGATTCTCAACCTTTCTCCTTTTCCTCAAGGGAGCATTCTTGCCAAGGAAAATCTCCAAAGGCAAGACCTTGTGCAGCAGCCAATGGGGCTCTCGTTTTTTTTTTTTTTTCAACATTGTATCACGA-TGACCTCTAGTGGTGGTTTATCTGCTTAACTGTA-----------TAAAGTTTGACTCCGTGAAAGCCCTCAGGAGCTGG---------TGGTGACCCTCTGACAT----------------GTTACTTATCTCTTGGATCTGACAGGCTCTGGAAAGCATTAGGAGTAGATGGCAAAGTCTGCCTATGTGCTCT-------TAGG---------GTTCCCTTTGGAGGTGAAAAGAGGGGGTGCATTTCAGCCATAACAGCCCTGCTGGTCATTTC-ACTTCTCTGCCCCATCCACAGGCATGCTAACAAACACAGACACAAG-------------------------------------TGATAGGCCCAGCAGAGCAACCTCCCTCAGGGGCAAGTTAGCAGGGGTATATAAGCAAGTACAGGGGGCAGGGAGGGCTTCTGTCTTAAAGAAACCCCTGGACCTGGCTTTG--TTTGACTTGCTAGAGC---------------------------------------------------------------CTAAATGGTCTAGGG a score=39658 s hg17.chr15_random 129583 1344 + 784346 ttcTGGGAACCTCTAAATCAGAGCCCGTAGCTGGTGGTCAAGATGAGGGAGAGGCCCTCAGGGTCAGCCGAATGCCTGAGAGGCCGGACAGGCCCAAAGGTGAGCAA----CGTGAGCACATCAGGTGGGCTCAGAGCTGGCGCATGAGCCCCACAGCCTGCAGAGCAGCCCTGTACTCGGGAGCCCGCTCGCACCAACCCAGTGGGACTTCAGAGATGTGGGGTCCAGCCTTTCCTACTATTGCTGGGCTGAGGGCTGGGAGCTGCAGATTCTGACCCCACAGCTGCCTTAGACATGCCAGATGG-TCTGGGGCAAGACACACCCCTCTCTATGAAATGAGCAGCCAGTCCAAATAGGTACATTAGAGAAGGGCTGTGGGATGGACCCAGCTGTAGCCTGGGGCTACAGACTGGCTTCCGGGGTACTCAAGCAGCTGGCCTCTGGGGTAGCAGCCCCAGGTATGAGAGGCAGGACTCAGAATCTAGGCCAAGCCT--CCATAGGAATCCCCTCTGGAGAGCCCGGGCACTCTGC---------AGGAGGGGCAGCAGGCAGCAGGTGCACCAGGAGCATGTTTCACAAGGTGCCCAATATCGCATCTGCTC-AGATAGGCAGCGAGTTGGAAAGTGGATGCAATAGGCAGGGTGGCGGCTGCTCCCCACAGCCAGGAGTCCGGCCCAGCACCCACCTG--AGTCCGCCTCAGTCCTGCTCAATT-GGGTTATCCGTGCTCTTGGCCCTCTGGTCCCACCCACAGAGGGAGGTCTTTGGGGCGACCAGGTGAGCTGGCCCTTGTGGGAGGATGTAACT-GACTCCTGAGCCTGGCGAGCCAGGCAGCCCCTCGCCAACGTCCCCACCCCTACCTCTCCAGCCCCCCCGCATTCCCTGATCCTCCCATCCGCTCCCCTGACCCAGCAGT--TGCCTCTGCTCAC-----TCTCTTTTCCTGCTCCCAGGCTCGCCTGGTCATGTGTCCTTCACTCTCCTCTGAGTCTCCCTCTTTC-CAAGCCGCCTCCACTCTACTTGACACAGTCTCCCTTAAGACACCAGAGTACACAAGCGCAAGTCCCTGCACCTCACCTTTAC----TCCCAGACATGGGAGGGAGATGACATGAAGACCCAAACGCCACTTAGCAGGAGATCTGGGGTATGCAG-AGGGGCAGAACGGAGGCTGTGGAAGCTCCAGGGGCT---------CCCTTCAGGAGGCCACATGTAAGCTGGCTATTGAATGTGGCTCTGagctgagacctct-ccttgaagctccagaccaggagccagctgatagctggacccctccatttggtgcctcagagaaactttgcactctctaggtctaactttgaacccagaaaa---------------------ttcccccatgtc s mm7.chr9 68751547 1341 - 123828236 TCTAGGGGAACTCTG-----GGGTCCATATTTGGTCCATGAGATG-GGGAGAGTCCCTTAAG-CCAGCTAAATATTAAAGAGA----ACAAGCT-GAAGGTGGTAAAGATTAGTAAGTACCCCAGGTGGGCTCAGAGCTCAAGCACAACCCCCCCACCCCGCCC--CAGCCTAGAAC-CTATAGTCCAGCCAGACTAGCCTCCCGGGGCAGCAGAGATA---GATCTAAGCTCCCCTAGAATTGCAggactggaggctgggtgctgcagagcct-atcccagtgctgccacagac-tgccaggtagacctttgacaagttagactcatctctatgAAATGAGAGGTCAGCTCTAATAAACA--------AAAAATTGTGAGAGGAACCTAGATTTATCCTTTGGCTACAGATAGGCCCCAAGGGTATTTAAGCTGGTGGCTTGTGGAGAGGGAATTGAAGCTGTGAGGAGCCAAGCTCAGAATC-------AGTCTACCCATATG--------CTGGACAACCCTCCCACCCTGCCCCCAACCCAGTGTGGGGATGGGGCAGCAGGTGTGCCTGGAGCATCTTTCTCAAGGCCCTAAATATTGCATCTGTTCTAGATAGGCAGCCAGTTGGAAAGCGCGTGGAGAAGGCAGGGTAGCGGCTGCTCACCATGAACATGTGGCCAGCCCAGCACCCACCCACAAGTCTACTTCACCTTTGCTAGACTAGGGTGATTCACATTCTAAGTACT-TGGCTCCATCCAAAGAAGGGGGTGTTTGGTA-----AGATGTGAAGGCTCTTTAGGAAAGATCTGACCAGACTCCTGGGCTTGGTAAGATAGTCAGCACCTCACCAGCATCCCTACCCTGATCCCTCTAGCCTTCTC---CTCTTTTAGCATGCTACCTGCTCTCCTTCCCTGGCGGTGTTTCTTCTGACCATCCTCATCTCTTTTCCTGCTCCTGGGCAT-CCTGTTCATGTGCCCTTGTCCTTCCTTCCTGTCTCCTTCTTTTTCATGTCCCATCC--TCCACTCTCCACAGTCTCCTTAATGACATCATAGTACACAATC--CAGTCCTTAAACTTCACCTTTACCTCATTCCCAACACAAGAGACAGATGAAACAAAGACCCAGATACCACTTGGCAAGGAATCTCGGATGCACAGGAGGGACAGATCTTGGGCTGTGGGTGCTCGGAGGGATGATGTCTGTCTGTGCAGGATGCTGATCTGGAGCTGG-TCCTCAATGTGGCTTAGAGCCAAGAACTCTGTCTT----------ACCAGAAACCAGCTGCCAGCTGGACTACTCCATTTGATGTCTCAAAGAGACCTTGTGTTCTGTAGGTCAAAGTCTGGATCCAAGAAAGGCTCCCCTAGAATAACCTTGTTTCCTTATTTC a score=2413 s hg17.chr15_random 130927 68 + 784346 ggccctgtctcttcacagGGAAAGCACCACCTCAGACCCAGTTCTGCACCAAACCCACATTTGAGTCA s mm7.chr9 68753190 68 - 123828236 GGCTTTTTGTTTTCTCTAGGAAAACACTACCACATACCCAGCTCTATCTACAGCCCACGTTTCAGGAA a score=2414 s hg17.chr15_random 131084 333 + 784346 AACTCCACCTCCAGCTCTGAGAGCTG-TGGGTAGGGAAGGGCCCTAGTCCAGTTTGCTGTAGAAAGACCAGTCTGCCACTGTATGGCACATGGATGGCAGGGGCAGAGTGCAGGTGGAG--------AGAACAGAAGGTGGG------CAGGGCGGGGGAGGCAGGGACATG----GCTGTAGCCGTGGAGATGGGAGGACAGAC--------------------------AGGACTTGGTGGCCAC---TTGGGTGAACCA---------AGGGAGGAGTCAGGAAGA---GACACCCAGTTTTGTATCAG-ATGTGTAGAGCGTGGGATGCTGTTCATTGACGGAGGGAGGAGGAGGAGGAAGAGGTATGGCATGG-GGAGGAGGTAGCTGAG s mm7.chr9 68753353 374 - 123828236 AACTCCACTCAAACGTTGGTCAGCTGGTAGGCTGGGAACAATCCTGGTGAA---------AGAAAGGGTATACT-------CAAAACCCGGAAGTGAGACGGGTAAGAGGCAAGTGGTGTGTACGCCAGAGAAGAGTCTGGGGCAGTCCAGGGCAGGAGAGGTAAAGGAACGCTTAGCTAAAGG-GTGGAAATGGAAGGACAAACTAGAGGAGTTGGGAAGTGGAGCAGATAGGTCTCAGTGGCCGGGGGTGGGGGGAGACATTGGGGTTGGGGCAGGAGTAGAGAAGAACAGATGCCCAAGGTTGGAACAGGATGT-TGCAGCAGGGAACAGCATTTGCTGCCAG---GAAGAGCACAAGGAAGAGGTCTGTCCCGGAGGAAAAAATGACACAG a score=15197 s hg17.chr15_random 131486 305 + 784346 AGCTCTCAGGGTGTCTGTGCTCCCTGGCCCTCTCAGCTCCTGCTTCATAGCTGTCA--GCTGCAGTGGGAGACAGCTGCACAAGGGCCCAGCATGTCTG----TGTGTTTACCCAGGGGACTGCCGCATGGCCCATGCCGAGCAGAAACTGATGGACGACCTTCTGAACAAAACCTGTTACAACAACCTGATCCGCCCAGCCACCAGCTCCTCACAGCTCATCTCCATCCAGACGGCGCTCTCCCTGGCCCAGTGCATCAGCGTGGTAGGTGCAGAGGGTACCTGTGG-CTCAGGCTCAGGTGAAGAGGCAG s mm7.chr9 68753888 306 - 123828236 AGCTC-CAGGGCTCCTACACTC--TGCTTCTCACAGCCCC--CCTCTTCGCTGCCACAGCCACAGTGGGGTTCCTCCAGACAAGGGCCCAGCACGTCTGACTATACGATTTCCCAGGGGACTGCCGCCTGGCCAACGCAGAGGAGAAGCTGATGGATGATCTCCTGAACAAAACCCGCTACAACAACCTGATCCGCCCAGCCACCAGCTCCTCCCAGCTCATCTCCATCCGCCTGGAGCTATCACTGTCCCAGCTCATCAGTGTGGTAGGTGCCT-GGGCAAATGTGGCCTGGGGCTTAGGAGAAGAGGCAG a score=15975 s hg17.chr15_random 131791 1426 + 784346 CTcatgcccaagccctaagcagtcaatgtccagaggaatgaaatgactagagttgacttagactcaccggtacacggtggggaggctggaggagggtccatgaggtttataggtgtccagtatttaatgaggtcatggttttgttaacaaagaagaaatgagggtgggagcgagatcaccactggctaggcagccaatgggcctgcAGAGACTCTGCTCAGCTGAGTCTCCAGCACGACCATGAGCTTCTCATCCTGATCCTCCCATCCCCACCCTACTTTTCTCCCCCAGCTTGCTCAACAGGTGACCTTACAGGCTCCCTACTCTTTGCAGGGAATAAGAACCAGACTGGGGGAACTGACGGGTACAGAGGCCCAGGTGTAGGCGCAGGACCACAGGCAGTGAAGCGTCTACTGACCCAGGCGGGTGAGGGTCTGGAGAGTGGGCATGGCTG---CTGCAGGCATGGAAAGCAGGCACAGATGGCGGCACTCCCAGGGCCCATTGTCAGGGTCTCCACATGTGGACGTGTGCAGAGGTGGGGGTGCTGAGGGAGGAG---------GGGCAGGGAATTTCTCATCTT-CTCTCTACTGCC-TCTGAGT-TGGAGATGTCAGAGGGAGCCATGGCCCACTGTAAAGTAACACAATGTCCCCACCCACAGGATTAGAACCCCT-CCCCTGGAAGCAGCTCTGAGGGGAACAGTCACATGTAGAGAGTGCAGGGCACTGTGTCCAGCCGGGGGAAGGAGGTCACCAAGGGGGTTGACCCCCCTCTGGCCAGGTGGCTGCCTTCTGACACACCAGCCTCTGTCTCTAGCACGGTGGCCCCCACACACCCAGCCTGTGAAACCTACAGCCCTCAAGAAGGCTTTGGCCAAATTAAGGAGCGGCTCCCTCTCCCAGGAGGAAGCACAGGTGAAGGATGTGGAGGGCAGTAGAG-TTGTGTGTGCTCCGCCCCCTTTCTCCACAGTCGGATGGAAAGAAGGGGGCTTTCAGCCAGGCT-CGCCCAGGCTGGGGTCTGAGTGTCACTGTCCAGCTATTGGCTTCTTGCTTAATGGGTGAGCCCAGCTGCTCCCGTGCAGCTGCCGCCCTAGTGAGGGTGAACCGGCAGGCG-----AGTTACATTTCTGAA------------------------AGCCTGGGAATACAGTAAATATTAGG-----------------------------------------------------CTGTGGGCTG---------------------CTGGGC------CAGGAAGAGTTGTTTATTTTTCAGGGTTTGTTTATCTATTGACTTGATGAGGGAGGGTTATAGGTACAACCAGTTTAAAGATGGAAATTTTGAGAGAGCAGGCAGGGATTTAGTGCT---GGGTAAGC---CTGGTCAAAGCGGCTCTTTTGG----GGCGGCCAGAATCCAGTACCAATGTCCTCAGCATGTTCATCAgctgctggggg----------agtgcgggacagcatgaaagcacaggagaactttctggatgatagaaatactctgtatcttc s mm7.chr9 68755465 1346 - 123828236 CTTACATCTAAGCC-TAACCAATCATTGGCCAGAT------AATTACTTTGGCTGGTTTAGATCTGTCAGGGTGTGGCAAGGAGAC------------CATGAGGTTTA---------------------------------GTTGTGAAAGAGGAAA-----GATAGAGCAGGA---CCATTAGGCAGGCATCCTATGGACCCCTTGTGGCTCCCTTTAGCTGGGTCTCCAACA--GTCACAG----------------------------------------CTCCCAGCTTGCTCAG--AGACATCCTCCATGTTGTTAATTTGGTGGGGGAAATAGGAACCAGGCCAGGAGAA-TGATGGGTACAGAGGCTCAGGCCT----------------------------------------GTGGATGAAGGTCTGGA---CGGGCACAGAAGGTTCAACAGGTGTGGGAAGGAGG-----GTGCCAACATTCC---------------AGGTGTTCCAAGCTGGATTTGAG--GCAACAGGGGCACCGAGGAAGGCGAATGTGAATGTGATCGTAATTTCCTTCCTTGTTCCCCACAGCTATCTCAGCATGGGGTTGTCTGAAGGAACCGAGGTCCCTTGTAAACCTTCCCA-TGTCCCCACCAA-AGGGTTAGAACCTTTGCCCCTGGAAACCACTCAGAAGA-AGTGATCACATG------------GGTGATGTGTCTAGCCAT---CAGGTGCTAGCTGAGGGAGGCAGGCATCCTCTGCACAG-----------------TGTCACCTTCTCTCGCCAGCCCAGTGAGCCCGACAGGCTCCGCTTCTCCCATCTGTACTGCTCAAGAAAGGTTTGCCCAAATTGGCAGTTGCCTCTATCCCCTAGGAGGGAGCCTAGCCCCAGAGTGGGAAGAGGCACACAGCCTGCCTCTGCTCTTTCCCTGTCATGGAAAGCTGAAAGCAATGAA---GGCTTCTGACCAAGCCACACCAAGACTACTGTCTGAGCATCCCCGACCGGC-AAAGGCCTTGTACTTAATTAGCAAG-CCAGCTGC-------------CTGCTCTGGCAAGGGTAGACAGGCAGGCAGCTCTGGCCACACTGCCAGACTCAGACTGTTCCTGCCAGATCTGAGCTGTGGACCCTATGGAGTAATAGAGGCTTCCAGAAGCAGGAGAGACACAGCCTGCAGCTTCACTTCTGCAAGTGCCCCTATGGGCTGTCATAGCCCCAAAGGCAACCCCTAGGCTTTCTATGGGGAGAGTTCCCTTCTGGTTTGGGGAAATGTATTTG--GTTCTGAGGAGTGAGTGTTAGAGGCCTAGCCAGTTTAAAGATAG-AATGTCTAGGGAATAAACTAGGAGTTTGTGCTGGGGGGCAAGCAATCTTTCCCACTCTTCTCTTTGAGGACTGACAGCCAAGGTCTTATACCACTGTTCT-GTCACATTCAGCAGCCACTAGTGGAGTAGAGAAAAGTAAGAGGCAGAAGAAATGCACAGGAGAAATTTCTGGAAGATAGAAAAGACCCATATCTTT a score=11318 s hg17.chr15_random 133628 419 + 784346 GGACAGATGAAGGTTTTCAACTTTCAGTAAAGGCAGAGGAGCTTGTTACAGATTCGCCTCCCCACAAGAGCAGTTAGAAAAACTGGATAAAAATGTGCCCCGCCCCCAATCAAAAACAATTGTTGGAAGGTAATTGGAGACCTCAGTCAGGACTTGAGTGACCAG-GCCTAGGAGGTGATCCTGACAGTCTGTAGTGC--TTTCCCACATTTGGTGATTGGTCAACAGTAGAGGGCTAAGAGGCTAAGAAACTGAGTATGAAGTGGTAGTTAAGAGGCTGGAGAGCCTAGCTGAATGTTTGGCACTCTCACAGGGCTGAAATGA--CCTAATGAGAATTTGGGTCCCAGGAAGGAGATGGGACCTTGGTGGGGACCCTGGAAGGGCCACCCCTGGGAGTCCAAATGAATAA-AACA-TAGACCAGC s mm7.chr9 68757559 370 - 123828236 AGATAAATGGAGGTTTTGAGCTTTCATTGATGGCAGGGATGCTGG----------AGCTTTTCTGAGGAACAATTAGAAAGGCTGAACAAAA----------------------------TGCTGGC------------GCCTCAGCCAGGGCTTGAATGGCCAGCTTCCAGGAGGCGACCCTGACAGCCTGTGGTGCCTTTTCCCACACTTGATGGCTGGCCAACAGTATCTGCCTAAGAAGCTAAG--GCCTGGAACAGAGCAGCAGCTGCGGAGCTGGGAAG-CTGGCTG-GTGCTGGGGGCCATCCCAGGGCTGAGAGGATGCTCAAAGGCAACTTGGATCTGACCAAGGACATAGAAACCTGGTGGGGCTCCTGGAAGGGTCACCC--AGTACTGGAAATGAGCAACAACAGTAAATCAGC a score=2107 s hg17.chr15_random 134068 65 + 784346 CTTTGAACCAGCTTAGTCCCAAAGTAGATGAAGGCGATCTGCCCTTACTCCAATTGTGTGCCATA s mm7.chr9 68758162 57 - 123828236 CTCCAAACCAGCTCAGCACCAAACTTGATTAAGATGATCT--------TTGTACTGTCTGCCATA a score=16301 s hg17.chr15_random 134673 328 + 784346 TAGATGGCAGCTTCCAGGTGCTCCTAAGGGGCCAGGAAAGAGAGTGAGAAGGCACGGAGGTTGCCAGATCATCCCCCTTGGGGCCCCGCCCTCATCAACTCCCTCAACCGGGTCTCCTGCAACTATTGGTGGGCCATCTCGGCCACCGCTTCGCCCTGAGCTTCCTGCTGCTGCAGCTGG----------------------------------GCAGTGCCTCCTTCTCAGAGGCCAGCTGCTGATAGGCGGCCA---------------------CGTACTGCTGCAGGTGACCCAGGTAATGGTCTCGCTGCTGCTGCAGACTC--AGCCTCTTGGCTCTTCAGCTCCACCTGCAGGATAGGCGTCAGGGTAGGTAGTGGCT s mm7.chr2 150235975 380 - 182548267 TGGCTGGTAGCTTTTAGGCGCTCCTATGGGGCCAGGAAAGAG--TGAGAAGGCACAGAGGAGGCCAGGTCCTCCCCCTGGG---CCCAGCCTTAACAGCTGCCTCACCTGGGCCTCCTGCAGCTCCTGGCGGGCCAGCTCGGCTGCCATCTTGCCCTGTACCTCCTCATGCTGCAGCTGGTCCATGAGCTGAGTCTGCAGCAGAAGCTGCTTGTGTATTGCCTCCTTCTCAGAGGTCAGCTGCTCATAGGCCGCCAAGTGCTGTTGGTAAGCAGCAGCGTACTGCTGCAGGTGGGACAGGCACTGGTCTCGCTGCTCCTGTAGACCCTGTGCTTCTTGGCTCTTGAGCTCCACCTGCAGGACGGCCAGGAATGAGGGCAGTGCCT a score=2451 s hg17.chr15_random 135223 43 + 784346 TCTGCTAAGTTGTGGTGAGGTCATTCTGTATGATCTCCAGGGT s mm7.chr2 150237101 42 - 182548267 TCTGCTGA-TGGTGGTGCGGTCACTCTGCATGCTCTCCAGGAT a score=1876 s hg17.chr15_random 136304 89 + 784346 atcttctcctccttctcccacatcatctcctcctgcctccgcatcttctcctcctgctcccgtatcttctcctcctgctcccgtatctt s mm7.chr2 143565879 87 - 182548267 ATTtttttctttttctttttctt--tttcttttttctttttctttttcttctttttctttttctttttcttcttcttcttctttttctt a score=5978 s hg17.chr15_random 136393 182 + 784346 ctcctcctgctcctgtatcttctcctcccactcctgtatcttctcctcctgcctccACATCTTCTCCTCCTGTTGCTGGTTCAGGCGGTTCCACAACTCGTTCTCTTCCACCTGGGCTTGGAGCTTTGCTGACACACTCTGCAGCTCCTTACCCAGGTGGTCAGCCTCCGCCTGCAGCTGCT s mm7.chr2 150237143 182 - 182548267 CTGCTTGCGCTCCTCGGCCTGCTCGCTCCAGCGCTGGGCCTCCCGCTCCAGCTCCAGCAGACGCCCCTCCTGCTCCCGGTTGAGGTGGCTCAGGCTCTCATTGTCCTGCACCTGAGCCCGTAGCTGTCCCGTCAGCCTCTCCAGTTCCTTGTGCAGCTGCTCGACCTCTCCCTGCAGCTGCT a score=951 s hg17.chr15_random 136987 123 + 784346 GGTTTTCATCCATGATCCTTTAAAAA--AATATTTTTAAGCCCTAACTCTTGAGATTCTGATTCCCCAGGCAGGGCCCCAAT-TTGTACATTTTTAGTACACTCTAGAGGATTCTATGGCGGGACC s mm7.chr2 143566217 110 - 182548267 tgtatTCAGTCAGGACACTTCAAAAATGAAAATGTAGCAGTCACATC-------ACCCTCACTATGTGGTCAAGGCTCTACTGTTGAACAATTA---------CCGGAGAATTCTATCACAGAACC a score=11230 s hg17.chr15_random 137110 514 + 784346 AGAACAAGGACCCAAATTTTCCAGCTCTTGGCTGGAGCCTCCCCATACCCTGCATGATCCCTAGACCATGGTCCCAG----CTGGATGGGTCTCCCACAACCCCCGGGGCTGCAGCTGCTCACCTGTGGCAGCAGGAGCTTGGCCCTCTCCAGTTTCCTTTTTAGCTCCTTTACGTTGAGCTGGATCTCAGACTTTTCAGATTCTACAAGTTGAAGTTTTTCTTGTAGTTTGGCATTTTTCTCCTTCAGCTCCTCATCAGTTATGCTATGGCCAGAGGCAGTAGAGAAAGGAATGAATGAAGAACATAAAAGACCACTTTGGTGATTGACCCCCTACCCTCGCCCCACaaccacagaaccgtggcgctggaagggaccccaggaattaaaagtcccaggtggcaggccagagagaagacatgagttgcctgaggctaccccatgagtcagtggcacagccagcactagagcTTCCGTGTGCACACATGAAAACATGTATGAG--------CCACTCCCCACACTCA s mm7.chr2 150238574 461 - 182548267 AGGAGGAGGTTCTAAACTGTCCAGCATTTGGCTGCAGGTCACCCCCA------AGGAACCAGAGACTGTGTGCCTGGGCCTCGGGGTGAG-----------------GGCTGCACCT-CTCACCTGCTGCAGCAGCAGCTCTGACATCTCTAACTTCTTCTGCAGCTCCTCCACCCCCAACTGTGCAGCTGCTTTCTCTGCCACCAGGACTCGGAGTTTCTCTTCCAGTTCTGAGTTCTGCTGCCTCAGGTCCTCATTGCTTTTGCTGTGGTTAGAGGCAAAGCAGAAAGGAAGGAGCCAAGAACAGAAAGGAACACATTTCAGAGTGATGCATGAGCCTTGCCACACAGCCACAGGGC----------aaag------caggact---------------------cagagaga----ctgagttacctggggccacagcatgagtcaggagcattgctgggaccagagcacagctctacacagacccaaacctgtctcggctaagtctccactctCCACACTGA a score=7099 s hg17.chr15_random 137682 195 + 784346 CCACCTTCCCCCATCCTACGTGTTCCTGTACAGTTCCAGACTCAGGGCGTCCCTCTCCTTTGTTAACTCCTCAATGTACTGCAAATAGAGAAAGGTTAAGTCAGGATAGAGCAGGC-ACAGCAGTAGCTGG-ACGACCAGGAACAACTGCTACAGTGACTACTCCACAGTAACACTTCCTCACTCTCAATCACACCT s mm7.chr2 150239195 189 - 182548267 cCTCCTTCCCAC-TCTTACCTGTTCTTATACAGCTCCAGCTTGAGGGCATCCCGCTCTTTGGTTAGGTCCTTGTTATACTGCAGAAAGAGAAAGA-TGAGTCTGGACCTGGCAGGCTGAAGCAGCAGCTGGCACAAC----ACCAATGGCCACGGTCA-TATTCCAAAGTGACATTTCCTC-TTCCTAATCACATTT a score=17572 s hg17.chr15_random 138283 975 + 784346 AAGAGATTGA-ATTTAGAGCTGGCTAACAG-GGGCCCAGAGCGATCAGATAATATTGTTATTGTTATTACTGTtagtactaccattgttcgaacctttcttgagtgcttcaccaggcactat-gctaacaatcccatttaatcctcaca-acctccataggagacggttaccattattacctctattgtgtagatgaaaaacatgcggtattaaaggttaagtgctg-cctaagatcacttgg--------agctgggatttcaacacccaggtatatctgattctctaagcccattcttccgctgGAGGTAGGGGCACAGTTAAGAAGGAGGAAATTAATCCTTTGTTGAATTTTTGAAAGGATGATACGTTCGCATAGTCCAAAACTCAGAAAGTCCAGAAGG----GAAATATCTCCCCCCAACACTGTGCCTCTATCCTGAGTTTTTTAATGAATCCTTACAAACGTGTTTTATGTATGTTACCATAATACGTACACACACACACATATACACCTGCCCCCTCTCTCCACACAAATAATAACATACTCAAGATACTCTTCTGTACCTTTATGGTACAAGTACCCTAACCGCCACTTAGGACTTGGCCAAGGCCACAGCCAA---GTATGGGCAGGGCGGGCACTTGGCCTCTGAGCTCTATGTCCAGTGCTCGCTCCTCACAGTGCTCCCCAACTCACCCACAACAGCCGACTCAGCCCC-AGTCTGCCTCTAACAACCACACA-CAAAAGCAGCAAGAAATGGCCATGCTGCCTTCTGGGCAGGACACTCCATCCTACAGAAGGGACCTTTAGGCTCACTCCTCCATCTGCGAAGCTGGGCTCCCAAGGGACGGGGCCGTGTTTGGACTCACCCTATCCGCCTTCTTCTTCTGTGTAGCGACAGCAGAGAGAGCCTGCTCTAACTCTCCTGCAAACTTCCATGAATCATGCAGGCGGCTGATCAGATCCCTGGCCTCTCCTGGAATGAGAGA s mm7.chr2 150240911 855 - 182548267 AAAAAATTGACATTTACAGCAGGCTAGCATTGGGCCAGGAACTCTTGGACACCACTGGTGTTGTTAAtattgttcac-----------------------tgagcactt-accaggcactgttgctaataatcccatgcaatcttcatacacatctaga----acagttgccatca---cccacactgggcaga--aacagcacac------aaagtctacgtgctggcctgaaatcacttaggtcaacagagctgagacttgaacatttcgg-gtgtctaactctctaggccctttcccctg--------GGGGCTGCAGATAAGC-GGAGGATACT--TCTCTTATTTAACTTCTATCTCAGTCTTGCTCTC-------------CTCTGAA----CAGATGGCCATTCAGTCACCCTCCCCA---------------CCCAAGTTT----ACCAATCCTCTCAGACATGATTTGCATACACTGC--------------ACACGCACAT-----------TCTTCTCCCTCCACAAATGGCACCAT-CTGAAGAT-----------CTGTTCAGAGATGAGCACCCATCCCATCACTTAGCACTTGGTCAAGGCCACAGACAAACAGCAGGGTCACAGCAGGCACCTG-CCTTTAGGTGTTGCATTCAGTGCTTGTTTAT-ACAGT----CCCCAGTTACCCA--GCAGGGTACCCATCCCCCAGGTTGCTTTTACCAACCACACAACAAAAGCAGCAAGAATTGGC-GTGGTGTATGCTGTG--AGACACCCGGCCATGCAGCAAAGCCCTTCAGGCTCACTG-TCCACCAG-GAAGCTG-----CTGATGGCCAGAGAATCGACCTGTCTTACCCTGTCTGCCTGTTTCTGTTGCGTTGACACGGTAGACAGTGTCCGCTCCAGCTCTCCCACACGCTGTCGGGAGGACTGTAGTCGGCTGGCAAGATCCTCCGACTCTCCTGGAACAAGAGA a score=4574 s hg17.chr15_random 189654 276 + 784346 TGCAAAATGCTCTCAATTAACCTGACAAAATGTCACATACAGGGTTACTACATCTTTTTTATCATGGAATTTTGAAAACAAAAATTGTTCTATTGAGGCACCAGTATTTGGATATTAGAGGTAAAAACCACCCTTAGAATCCAGTCCTAAAAACGTCAATGAAGACTCCCATGTTTACAAATTCTTTTATTTCTACATGTCATCTATCAACTGGATTATGAACCTGAAAGCCTGAGAACAGAATTTATCAAGATACTCATGTTTATACTTTTTTTA s mm7.chr7 89467838 232 - 141766352 TACATAATGCATTAAATCAACCCCACAAAATATTATATACAAAAATAGCAAACCCTTGCTGTCATAGAATTCT----------ACTGT------GAAGAAACAATACTTAAATA-----GGGAAAGA---------GAATCCC------AATACATCAAT-----TTACCAT-TGACCATATTCTTTTATTTAAGCATCTAAGCAACCAGCTGGGTAATTAGTC-AAAACCATAAGAAGAGCATTCATTAA-ATGTCCATGCATATACACCTTTTG a score=2198 s hg17.chr15_random 190225 33 + 784346 ATCTACTGATATTTCTAAGCATGAAGTGACAAt s mm7.chr7 89468070 33 - 141766352 ATCTACTGATATATCTAAGCATAATATGACCAT a score=17664 s hg17.chr15_random 190559 946 + 784346 ATTTATATACAATAAGCTTAACTCTAAGAGCTTACA-TTTATGCGTAGTCATTCTTAATTGATGATTAGAGGA-AGAGACAAATAAATGGTCCCAGTTTagctactgatata-ctcaacaaaccttgacggacctgagggcattatgctgagtaaagaaaatcatttccgaagg-tcacatatcacttggt---aatctcacagtaacaaaattatagagatggagaacagattagtggt---tgtcaggagttagagatggtggcagaagaga-ggcaggagagacatctttgtagtgatgaaacagttctgcataggaaattgtagtagtagttacatttacagaccct-tgatagaatggcacagaactacgcacacacattgtaccaacttcaatttctgggtttttatactctattataattacataaaatgtaaccactggggcagtatgcgcaaatacacagtgacctctctagtttctttacaacttcctgagagtctattattat-ttcaaaataaaaagttttttaaaaaATTGCTTCATGCCTATCTAATTTCATGTGCCACTTAAAAAAGAACACAAAAATAGAAACTGTAGGAAATTCATCTGAGTGCAGCTTATGCAAGAAGGGGCAGGATAACTCCATTCTGGACTTATGCTCAAAGACATGCGCCTTTACCTTACAACAAAACTGGCGAACAGGCATGTGTTTTAAGAATAAAAAGCTTTTAAGGTATCATATATT--GTTTTTTAT----AGTTCCTTTGCTTAACTGACGTTTTGGTTTGCTAAAAAACTACCAATCACATCAGATTACAAGTACTTTCACTGTAAAAATAAAAAGTGATGTGACTGACACCTCTTAGCTCTGTAACGTATTACTCTTTACGAGAGCAGTGAAGGAAAACATGGTGATTCAATCACTCCACACA-------------CCAAGCAGAAAAGTGTTGAACAg s mm7.chr7 89468103 839 - 141766352 ATTTATATTCAAC--GTTTAATTTTTAAG---TACACTTTAAGCCTAA--------AGTTGATGACTGTCAAATACAGACAAATAGATGGTCCAGATTTAATTACTGCTGTAACTCAAAAACTGTCAGCa-----------attatgctaaatgaacaaagttatctcagaaaaaccacacaccatatgacgacaacctcagaataacaactccatagag--------cagatcagttctcagtgccagagatcacagatggggatggaagtcactacaagggag-catc---------accaagtagatcctc--------tagtggtgacggTTACATG-ACTGACATTACAACAGAAAGGCACAGAACTGTGCACATAAGCTGTAAAAATATAAATCT---GATTCTGATATACCA-----ATTAAGTAAAGTATAACCATTGGA--AGCATCCGGTAAAAGAAAACA--CTCATTATTTTGTTGGTAACTTCCTGAG--TCTATCACTATCTTCAAAACTAAAAGGTTTACAAA----TGCTTCATGCATATCTAATTTCATGTGCCATTTCAAAGACTCCTTAAA-----------TAGAAAATTC--CTGAATGCAACTTATGTAAGAAAGAGCAACAAATTTCTATTCTGGACTCATGCTCAAAAACATAC-TCTTAGCCTTTCATCAAGATTGGA-----------------------AGAAAACTCTAAAGGTGCAATGCACTAAGTTCACTATGCTCAGTTCCTTTATGTAATTTCCTTTTTGGTTTAATGGAAAAGTA-CAATTACATCAGAT---------------------AATAGAA----ATATGGCC-ACACATCTTAGGCCT----TATATTG-TCATTTCAAGAGATATGAAGGAAAGCTAGATGCCTCAATGAATCTACTTAAAAGTTAGGATTGCTAAACATTAAAGTG-TGAAGAG a score=4457 s hg17.chr15_random 191811 159 + 784346 TGTTTATATGTAATAACCACATATATATGCCTGGCATAAAATGAGCCCTGCATTAGAGGTTGCTGGATGTAGGGCCCTAGGCCTGACGTATCCAAATAATGTCTATGATAAAGAAGTCAATAAGTGCTCTCTATAACACACAAGCATTATAAGTTTTCA s mm7.chr7 89470125 149 - 141766352 tatatgtatGTGAAAACCAGACAGGTA--ACTGGCTTGCAACAGGCACTGCATTAAAAACTGCTGGTTGCAAGGAACTAAGCCTGGCATGT-----TAATATCTTTAA-AAAGTAGTCAAGGATCAATGTTTATTATAGACA--TATTAGAAGTTTTCA a score=8885 s hg17.chr15_random 191970 493 + 784346 CACTCCAAAAACTCTTCCTTTCTAAAGTTACTAAAACTTTTAAGGGCATTTCAAACAAAAACAGCTGTGGAAAACAGATCGGTTAAAT-CCTATGGCTA---AGAAACATCTTCCTATCCCATGTATTATTCATTACCCAGGTGTCAATTCTGTTTCCAATACAAAAGTCT---CAAGCAGTGAAGCGCTTCCCACTCCAGCTGGGAGAGCCA--------TCCTCAACA---------AGATAAGGGTAAAACCTGTGAGCACAAGGCTTCCATCTGCAATTCCTGTCTGCAGGGAAGCTCCCCAAAGAGGGAAACCATGTCTTATTCCTTACGGTAAAACACCACCATTCATTCCTTGTGTTTAACAACCAATGCTGGTGGAACATAAAACAAAGCTTAGCAATCACTTTTTTCATGCTACTTAGACCTGT---------AACACATTTTTCCTCTGGTGCACACTATCCAAAACCTAGTCATTTCCCTTACTCCTAGGAGGAATTTAGATGACTTTTTTTTTg s mm7.chr7 89470453 461 - 141766352 TACTTCAAAAATAACTCCTTTCTAAAATTACTAAAAATTTCTTGGGTATTTCCAACAAAATAAGCTTACCAAAATAAATGTCCTAAATGTATATACATACATACATATGTATGTCTTTCCCACATACTATTTACTGACTACAAGTCAATG-------------AAAAGCCTAAGTAAGAAATGAGGAACTTCTCAATCAAG----GAAAGCAACCCCACTCTCCCCAACCCCCAACTCCACATAAAAGTAAAGCTTGCCAGCATAAGATGT--ATGTGCA----CTGTC--------------CCAGACAGTGACACTGTGTCTAAG-CCTTAGGG------AACAACATGCATTCTCCATATTTAATAAGCAATGCTGGGAGAAC------------TGCACAACCACTTTTC-CATACTATTTAGACATCTGCATTACCAAACACATATTTCCTCTGATGTA---TAACTAAAACCTAGTCA-----CTTGTTCTTAGGAGACAGTGGGAAGACTTGtaaaaat a score=1851 s hg17.chr15_random 192766 87 + 784346 GACTTTCTAATCATATTGGAAATGTGTAACAAGGACCAAGTACTGTGTATTAAACTTAATA-----AATCA--AAACAACAGGCCCTCTAAGAT s mm7.chr7 89470914 93 - 141766352 aaatatataaataaatttaaaatatCTAAAAAGGGCAAAATACCA-GTATCACACTGAATACAGAAAATTATAAAATTATATGTACTCTAAGAC a score=6767 s hg17.chr15_random 193009 272 + 784346 TCCAAAAAG-------TTTCTCAAAATACATAAACACTAATATAAAACA-----ATTATTAAAACTTTGCCTGAATCTCAGGATTTCAGAAATATGAAAG-----TACTCATCTCTCACCTCTCCCATCCACTTA-AAATGACAAAA------CAGATCATTATAGCTAAATCAAAGGAAATGTTTAAAGAGAAACAAACCCAAAGAGTAACTACACCAATTCTTGACCCAATTCTCTGTACTCTGTCTTATGTAACATTACACTATGAATAACAATCCCATCATCCACAACAGCt s mm7.chr7 89471388 284 - 141766352 TCCAACAAGAACACACTGACTCACATCATATACACACAAAAATAAGTCTTTAATGTTTTTTAAAGTTTGTCTGACTCTCAGTATTTCAGATATAAAAAAAAAAATCACTTATTTTTCACCTCTCCAATCTGCTTACAAAAGACAAAAAGAAAGCAGACACTAACAGCTAAACTAAAAGAAGTATTTAAA---CAACAAAGGTTAAGAACTACCAAAGTACTTTC-------AATCCCTTAGCTCAGTCCTATT--ACAGCACACCATGAGCAGCAAACCTAGTATCTCCAACAGTC a score=12051 s hg17.chr15_random 193572 667 + 784346 ACGCAACACAGCTCTAAACACTGGACTCTCATATCTACCAACACTCAATACCTGTTTAAAAAGAAAAAAAAAATTAGGAAGGGGCAATAACACTTCAGT-GTAAGTATCCATGATCAACTACTGCTTA-ACAGCCT-ACA----CGACTTTTGATGAACAGTCA-------------------AGGCACATTACTT----AATACTTAAAATGGTTAAC--------CTTAGGGAGTAGGAAA--ATACAGACACACACAAAATATTTCAAACACTTCTTTTT-GCTGCTGATAAGGAGTTCCAAAAGTAGTTTTTCCAAGCCATTTCCAAATAAAAGTAGATTGGGTGTAAATAATTGTCTATCGaaatatta--gttattatttatttaataatGTCCTGACAA-GCTTGCAGTTATCTCATTAAATCAAAAAATTAGGATCTAAGGCCAACATTGT-TTCCTCACATTCTTGATGTGAAAATCTGAGCACTCCTCTTAATAAGGAGTTACAAAGACAAAACAAACAGCTCAACTGAACTAACTCTTGTCTCTCCAGAAACACAAACACAAGACCTCATAAAATGAGTGAGTTTCTATAGGCCATAATTACTGCAACTTACTTCTCCAATTTTCCCCTCCACAGTT------------AACTCAACAGC----------------------------------------------------------------------------------TC-------------------AAAAACGATCAGTAACAAACAACAGTCACCATGATATGGTTAGGAGTGTGG s mm7.chr7 89471672 779 - 141766352 ATCTCCAGCAGTCCTCAACACTTGGA-CTCAGATCTATCAGCACTCAACCCTAGTTTAAAGGGAAAAGGAAA-TCAAGAGAAGGCAATAACTTTCCATTTATAAAACTCCATAATCAATCGCTGCATACGCTGCCTTACAGTAGTGATTGCTGATAATAAGCTATCCGTAAGACTGTTACAAAAAGTCGATTGTTTGACAAATATTTAATGTGTTCAGCATCCTCGCCTCGAAAAGGAGGAAAGAATACACAGACAATAGAAACATCTCAGACACTTTTTTTAAGCTGGTGATATCCAGATCCAAAAGTA-CTCTTCCAAACTATTCATAAACAACAGTAGCTTA----TAGGGAACCATCTACAAAAATTTTATTGTGATCATTTAGTTAATAATTTCCTGATAACACTTGTAATTACTTTATTAAAC------ATTACCATCACAAGCCAGCATTCTGTTTCTCTTGTTCCTGGTGTGAAAATCTGAGCATTTCTCTTAATTACAGATGACA--TATAAAACCAACAGCTCATCTAAACTG----TCACCTCTCCGGGAGAACAAATACAAAATCGCAGAAAATG---------CTA------------ACTACATATCACTTTCCTGCTT---CCCTGCATAGTATCAGGACATACAAAATCAATAGCAAAAATATCAGGAcatgcctttcatcccaggactcaggatgcagaggccagccaggcacagtgagttAACAGGGAGACCCTTTCTAAAAATAAGAGGGGGGAAAAAAAGAAAAAGAAACAAACAACAGTCAA---GTCTTGATTAAGAATGTTG a score=32140 s hg17.chr15_random 194250 1319 + 784346 ACCAGTAATAATAAAT----AGGAAAAAAATTTTG------CCTATTAATAGATCTCAAGTTTCGTGCACTTGCAAGAAACT--AATTAAAAGGCAGCCGCGCACGATCTACAAAAACAGCCATAAAGACTGTTACATTTTAAGTTACAGGAAATAAACCTGCTCCTCTAATTCAGCAAGATACAACTGACTTCCCCTTACATACCCTAAAAAAAAGCCTTACACGAGAAATTTAAACATGGAAGCAGAAACACACCAAGAAAA-----AGACATGTCAAACCCCACCTGTATATCTGTTTTCAACCATTTGGAGTCGAGGCGAGCCTGGGCAGCCAAACAGAAAGATTCAGAGGGCATCTTTTCTCCAGCTTCCTCCCAGGTCTCAGGCCTGCAAGT-AAACACATACGCTGAAGACCTAACGCTTTTTAATAGT-TTACAAAGACACTCCCG------AAAGCCAGAAAAGAAAAAAGAGAGAGAGAACAGAAAGGGGGGAGAGAAGAGCTGGTGGAGGGga-gagaaagggagagagggaaagagggaagagatggagggagagggagGTGGGGAAGGGAAAGCCTCCTTCCAAGGTAGGCAGGGTGTGCCGAGTTTCTGCACCACGCTGACGAGACCTTGAGAATGGACGGTCACAGGAAGCCAAGTCACAATGTCATCCCCCTGCCCTCAAATCCAAGAAGTACACACACATA-----------ACAGGGAGCCCATCGTTTTAACGACAAATGACAGCAGCATGAATCTGCCGCTTTACCCCACAGCAG---GGC-GCGTGCGTGAAACAAAAAATTACTCAAAAGGATCGCCTGCAGAAAAACCCACAGCCACCACCACTTAAGAGATGGAGAGAGGCCCGAGGCTGCCCCGCGGGTGGTCCGCGCAggccccggtgcggccgccgcgcccacgcccgcctcccgggctcggccgcccgcc-agccccgcgcccgtaccgcccccgccaccggccgcccAGGTGCCCCAGGCCAG-----GACCTGACGCGCAGGGCCCGGCCGCCTC--GCCTCGCCGGCGCGCGGACGCAGC-CTCC---CAAGAGCCGCTGGCTCAGCCGGCGCCCGCGATCCCGGCGCCTCTCGCGGCCCGAGGGGCGGGCCGACGCGGGACTGCCGCCCCCCGCGTACGGCCAATCGCAACGAGGCTGCTCCGTGGGCGCAGCCAATGGGGAAGAGGAGCCCTTCGCCGCTCCTCCCGACTCTCCCGCTTCCAGCAATCCCGCTTATCTTCCTACTTGGAGCGCCCTGGCTGCGGCCAAGGCCAACAGCGGGCGCCGGAAGGCGGGATTTCCGCCGCACGCACGC--ACTCCCGCACTCCCA s mm7.chr7 89472645 1266 - 141766352 aCAAATAAAAATAAGCCTCCAGAATAAAAATACTGAAAAATTGCATAACTGGATCTCAAGTTTCTTGCACTTACAACTAACTTCAATTAAGCCACAACCACATAGCATCT-CTTCAACAGTCATAATAAATGTCACATTGTAAATTATAAGAAATAATCTT-----CCTAA---GACAAGATCTAATTGCCATTCACTCACACATTCT---------CCTCAAGCAAACATTTTT--TATAGAGACAGGAACACACAAAGAAAAGAGAAAACCATGTTCA-CCCCACCTGGATATCTGTTTTCAACCATTTGGAGTCAAGGCGAGACTGGGCAGCCAAACAGAAAGACTCAGAAGGCATGTTTCCTCCGGGT--------GG--TCAGACCTGCAAGTCAAACACAAACGCTGGAGCCCTCGAGCTTCTTTAAACTGCTATTTACACCATCCTGCTGTTTAACGC------------GGCCGAGACAGAACATAAAACAGGGA-AGGAGAGCTGGGGGAGGGGACGAGAGGATGAGGGATG---AGAGGGAA-AGCTGGCCCCAGAACGGGAGAAGGGAGGGAAATACCACTTCCAATAGAGGTAGAGT-CGCTGGGATTTCCCAATACGCCGGCCGGACCTACAG------TGGTCACCGGCGACCACTGCACAATGTCATCCCACT-CCTTTAAATCCAA-AGGGACACACACAGACACACGTCAGGAAAAAAAACTCACTATCGCAACGACAAATGACACCAGTGTGCATCAGCCGCTATA-CCTACAGCAGTCCGGCGGAGTGTGGTAAATAAA--------CAAAAGTCATGTCTGCAGATAAATCTACAACAATCGCC---TAAATACTAAAAAGACAGCCGTGACTGCGCGGCCTCCGAGGCGCACAGGCCCTGGT---TCCTCCGCGCCAACGCCCGCCTTCCG---CCCGCCGCTCTCCGGGCCCCGCTCTC---CCGGACCTGGCGCCGCCCGTCTTCGGCCCCTCCGCCCTCCTTCGGCCCAGCTCGGCCAGCCCTGGCGCCGCCTGCTCCGCCAGCCGGCTGAGGGAACACTCCCTGCAGGAGCCG--------GCCGGCGCTCGCGATCCAGTC------TGCGGCCCGAAGCGCACGCTGACGCATGGCT----------GCGCCCGCCCAATAGC-GCAAGGGTGAGAGACGGCTTCAGCCAATGGACGAGCAGCGTCGCACGCCCCTCCCCCAA---CTTCCGCTTCCTTCAGCACGACTCAGCTTCCTTCTTGAGACTCACCCGCT-CAGCGAGAGCCAACCGCAGACGCCGGGAGGTGGGACTTGTG-CGCACGCACGCTGGCTTGCCCAGTCCCA a score=27509 s hg17.chr15_random 211524 911 + 784346 AGAGTTGCTATTATACCACTT-------CAAGTGGATGGAGAGCCTCACTGCCATCCATTAATGTGCATTAATCATTTTGAGAGTGAAAAGATTTTTTAAAATGTTTTTACTTTTTTAGGTATGGCCAAGTGAGATGGGGCTAGTGAAATGGGTGGGAGAATTGGAAGCTGATAGTGTGTGAGCTAGACACCCATGAATGCTTTTCCACTGGGCAGTTAGAGGGATGA-TAGGTAATAATATAAGGCAGCTCCATCACACAAGCTG---GTGACTCCTGTGCGACAGACCAAGAGCTGCATTTGGAGATT-CATTTCCGATTGTTGCGTTTCCT-CTTAGAGCATTGCTTGGTCATCGTGTTCTGAGTGGTCCATTGGCCTCCATGTCCCTTTTGGGGTGGATATTTGCTCAGTGACTTTTGAGCAGCTGGATCTCCTGCTTCGGCAGGTGAGTGAGGGGATGGATGGCTCCGCGGACTGGCCCCCGCCCCAGGAGAAAGAGTGCGTGGCCGTGGCAACGTTGAATCTTCCCCGACTTCAGGTATTCGTGATTTCCCTTCCTCTTGCTCCTTTTATAAGTGTCTTAGCGATTTGTAAGAAGGTTTATGTATTCTGAAGGACATAGGTTTTAGCCTGTTGG--------------------GGGAAGTATTTTAAAGTAAGATTGTAATGCACTAATAATGGACGCAAGGCTTAAA---AAACTTGATCTGTTTATTTTATGTTTGTCCTGGAAGTCAGCCTCGGCATGCAGG-AAGAGTGTATATGGATTGTGTTATTTTTGCTATAATCATTAGTTTGTTGGTATTCTTACTGTTTTACTGTTGGTGCGTGTGGAGAAATGACTGGGTGAGATCACAGGTGATGGAGAGAGACAGAGCTCAGCTGAGAGACCAGTGCTGGCCTGTCTCTCCTCTGTCCTGTGAAAAC s mm7.chr7 52350858 891 + 141766352 AAGGTTGTGTATACACTACTTAGAGCTGTAAGTTGGTTGTGTGC-TCACTCCCAGCCATTAGTATAGATTAGTAATTTTGTGAATGAAAACATTTTTGAAAACACTCCATTTTTTTTAGGTGTGG--AAGTGAGGTGGGA-TGGTGAAATAGGAGAGGAAATTAGA----GATAGTTTATAAGCTAGA-AGGCATGAAT---------TTGGGGGTGTAGAGGGATGAGTAAGTGGTAACATGGGGTATTTCC-TCACACTAAGTGTAAGTGTCTTCAGTGGATGAGACTACT-GATGAACCTACAGATTTCATGTTAGGTTCCTTTTTTCCTTGCACAGAGCTTTGCGTGGTCATCTTGTTCTGAGTGGTCCATTGGCCTTCGTGTCCCTTTTGTAGTGGACATCTGCTCAATGACGTTTGAGCAGCTGGATCTCCTGCTGCGTCAGGTCAGTGAGGGGATGGACGGCACTGCTGACTGGCCCCCACCACAAGAGAAGGAGTGCATGGCTGTGGCAACGCTGAACCTTCTGCGACTGCAGGTGCTAATTTTTTTTGCTGGTTTCCTGTCCTTTATGAATGCCTCAGGCATTCCTGAGTGTATTCATGGGCATTGAATG-TGTGAACTTCACCCTATTCACTGAATTGATAATAAAACCTTGAAAGTATTTTAAAATAAGATTACGATG------------------GGGTTACGTGTATACTTGATCT-----TGTTTTGTTTTTCCGAGAAGTCAGTCATTGCATATAGGTAAGAGTATGTACAGAATCAGTTCTTTCTGCCATAAGCAC---CTTCCTGACATTCATG------TGCGGAGAGTGTGTATGGAGAAATGCC----CGAGACAGTAGAAGAAAGAGAGGGGTAAACTCCAGTTGACAGACCATTGTCCCCTGGATTGTTTTTTAGACTGTGAAAGC a score=2155 s hg17.chr15_random 212651 47 + 784346 TCTACTCAGTAAGCTCGGCTCCCAAAGCAATACCTTCCTTTCCTCAC s mm7.chr7 52351749 47 + 141766352 TGTATTCAGTAATTTGGCTCCCTACATCAGTACCTTCTCTTCCTCAC a score=5675 s hg17.chr15_random 213154 480 + 784346 GTCGAGGTGTCCC-AGCGTATGGTTTTGCATTTGCCTCTCCGGGGTCCTGAGGGTTCTGTAGGTTTCACAGACTCCAGGTGAGTTTCGGTGGTCATTTCCTGACCTGTGATATCTATACCTAGATGAGTGGTGTGCTTTTGATTTCACTTCTACTCACAGGGCAAGGCCGGGTCTCTGATTTCTCATGGGGCCTCTTGCTACCCAGAGCCTGGGACGGGCAGTGTGTTGCCCCCTGGCTGCGGTTGGCTGGCAGGCAGGTGATCCTGAGTGGCTCCCAGCCTTCTGCAGGAAGCTCGGGTTCAGTGGGTCCTTGTG--------------TGCATTCCCGTG---TGGGAGGTTGTGCTGAAGCCTGGCGGCTTGGCTCTGCTTTCAGAGCCCGGAACCTCTTGACTCCTGCTGTGTGTGCCCATGTGAATTTTGGTTTTGCACTTGAGGAGTTTCCCTGTGTACTCTCAGCTCCGCAGTCTAATTTTTAGCAGCTCt s mm7.chr7 52354358 424 + 141766352 GTCAAGGTGACCCTAGAAGCCAGTATTGATTTTG--TTTCCGTTGTGTTGTAGG--------GTTTTACATGCTGTAG-TGGGATCAGGTGCTCATTT--TGACCTGTGATATTTGTGCTTAGATGGGCAGTAGACTGTT-ATCTTGTAGCTACTCAGAAGGT-AGGCTGGCTCCCTGGTTTCTTGTG-----------CACTAGAAACTTTGCATATGAATAGTGCAGCACTCTGTC-----------------------ACACTA---GGCTGTCAGATTTCTAGGGAAAGCTCAGGTTTAGCAGGTGGTTGTGAGGAGCTTGGGAGCTGCTCTTCTGGTCACTGGATGGCTGCTCTAAAGGCCAGC--CTGAGCCCTGCTTTTTAAGGCA----------GACTCCTGCCTTGT-----CA-GTGTACTT--GTTTTTCTC-TGAGGACTTTGCTTGTGTGCTGT-AGTTTGGTTATCTAGTTTTAAACTGCGGT a score=3698 s hg17.chr15_random 213909 197 + 784346 TGGTTACATTGTAGCCATTATTTCTGTGTTTGGTGCAGATTGTTGGGG--CGGGGTGGAGGTTGCTGTTGCTAGTTGTTTAGCTCTTC-TGCTCATCTTGAGCTTTTCCATATATATGTTCATAGCGGGGTTAAAAAAAATTCCTCTAGAA------------AATATTT--CAACTATTGTGGGTAAGAGTTTTTTTAGTCCAGTTTTTAAAA s mm7.chr7 52354782 201 + 141766352 TGGTTCCA--------GGCATTTTTCTGTTGGATATAGACTGTTGGGGATTGCACTGATAGTTGCTGTTCTACATTATTTAGTCCTTTGTGCTGATCTTGTA-TTTTGCAGTTGCATAGTCAAAGCTGGGTAAGACATTGTTTTTGTAAAGTACTTTCACAGTGATATTTCCCAGCTATAGTGGTTAAAAA--TTTTTAGT--AGTTTTAAAAA a score=40476 s hg17.chr15_random 214108 1087 + 784346 ACGTAAACTGAGAAGTTATTTTGTCTATTTAAATAATACTTCAAATTGACTTTTATTCAGTGTTTAATAAGACTTTG---AAATTCACTCATTTTTAGGGGTTCTAAGTGAAAATTGTTTTTCTCCTTTCAGTTGCATGCTGCCATTAGTCACCAGGTTGACCTGGAATTCCTTGGTTTAGGTCTGGGCAGCGTCTTCCTGAACAGCCTGAAGCAGAAGGTGGTGACCCTGGCAAGCAGCGCAGACGTGCTGAGCACCGTGCAGTCGGCCTCCCAGGCCATGCTGCAGAGCGGCTGGTCCATGCTGTTGCCCACCGCTGAGAAGCAGGCCCGGGCACTCT--GCTCTCCTGTCCTGTGGAGGTGGGCTCGGGGAAGGAACAGGAGAGGGCATGGGTCAGGGTGCTGGGAG------GGGATGGCGTTTCACTCAAATTG---------------------------GCACAGACTTTCTATTTCAGTTTCAGGCAATGAAGTGAACATAAGTCCAGGTCATCGATTGGTGATTGATCTTCTGGTGGGCAGCTTGATGGCTGATGGAGGGTTGGAGTCAGCCTTACACGCAGCCATTACTGCAGAGATCCAGGTATGGCCTTGGAGGCACA-----------------CGTGACCTGGTGGTGGGCTGAGATCGGAAATACCACACTCACACA-----TGTGAAGAATAACTGAAAACAGTAAAACACTAAACTTATATCCAAGTATTT------TTTTAAAT-TAAAATTCTT--TTATGTGCTAATTTTAAAAAT-------TATTGAGATGATTTGTGATAAAAT-ACTGCATGT----TGTCTGTTTCAGTGAAGTTAACAGGTAACCTGTTCCTCatgtagaccattcccgtcacccggaaagatccctgtgctccttggcacttgcagccaggatactcccctgccctgagattagattcatttttcctgctctgagtgtcgcagcaatataactgtatagtatgcactctttcctgctttgccttggagaatgattttcagattcactcactgttgtgtgtattgcgacttcgtttttattattgggaagttttcca----ttttataggtg--tagtactgtttgttagttcattctcctattgaaggacatgtaattgtttttggt s mm7.chr7 52355409 1125 + 141766352 ACTTGAACTGAAAAGTTAATTT---TGTTTATATAAAATTTCAATTTAAACTTTATTCAGTCTTTCATTAGCATTTGGAAAAATACATTTGCTTTTGGATGTTCTAAAT-AATTTTTTTTTTCTTTTTATAGTTGCATGCTGCCATTAGTCACCAGGTTGACCCGGAATTCCTTGGTTTAGGTCTGGGCAGTGTGCTCCTGAACAGCCTGAAGCAGACCGTGGTGACCCTGGCCAGCAGTGCAGGAGTGCTGAGCACTGTGCAGTCAGCTGCCCAGGCTGTACTACAGAGCGGCTGGTCTGTGCTGCTGCCCACAGCTGAGGAGCGGGCCAGGGCACTCTCAGCACTCTTGCCCTGCACAGGTGAGCTTTTGTTAGGTGAAGAATTGGGCACAGACAGGAACGTGGGAAGGAATGTGGGATGGCACTT-ATCCACATTGCTAAAAACAAACGGCAAACTTAACAGAGCAAAACCTTCTTTTTTCAGTTTCAGGCAATGAAGTGAATATAAGTCCAGGTCGTCGATTCATGATTGATCTTTTAGTTGGCAGCTTGATGGCTGATGGAGGATTGGAGTCAGCTTTAAATGCAGCCATTACTGCAGAAATTCAGGTATGGCCCTAGAAGTACAGAGGAGTCAATGAGTGCTTTTACTTAGTGTATGGTTGCGATTGAAAACTCTGTACTCGGACATTATTTAGGAATCGTGACTATAATCGTTGAAGAACCCAAAATGTA---AAAAATTTAAAGAACCCAAAATGTAAAAATTTTAGTTACATACAAATTTTTAAAATTTAAAACTCTTGCTtttatttgtgataaaatgatcccaccttaagtgtctactttgatgattttgacag---atccttccatcacatagattattttcatcaccctggaagatccttatgtccctttgcattt------aggctactcccctgcctgtagattg-----------tctgccctgaatgtcatgtaaatggcacagta-ggta-gtaatacctcttcttttgcctgaattgatggtttttgtatttaaccacatcacagtttgttactactttgttcttatgattgagaattttttcatgctttttattgttgaaaagtact------------------ccattgaatg-cttgtaacacttgttggt a score=3693 s hg17.chr15_random 215501 297 + 784346 gctttctggtttttgg----ccgtg-----tagagctgccacaattgtgctgtgaacaagta---------ctttagtgaacatatgttctccctttggataaacacttggagtggaatttgttaggtcctggggtaagtgtgtgttcatagtttcccaaagtggctttgccatttgcatttgaaccaggacttttgtgtgtgagaattctagctccttcttgtccttacAGAGCAGCTGGATGCTGCGTGTGTGGAGCCGATCACATTGGGTTTTGTGTGAGCCATTAGCAGGGTTAAGGATTTTAGGGACTTC s mm7.chr7 52356534 277 + 141766352 tgtttatggttttaagtctactgtggtcactagggttattaagttcgtcaggggggaaagtgggtgctaaccctt--tgagcatgtatttttcctgtgactaaatactttgggaggcattagctgagttctaggatgcatgtgtgcttatttatTTCCAGATGAGCTCTGTTTCTTACAATTGAACA--------TGTATGTAAGAGCTGCAGCTCTTTCCTGACTC----------------------TGTATGAGTCATAAAATACTTAGTATTGTCAGAATTGCTGGC------AAAGATTTCAGTGTCTTg a score=16409 s hg17.chr15_random 215850 395 + 784346 AAAAAGAAGACACTGTTTGAAACTGCACAAAT---GAGTTGGGGTTTCCAACAGGGCAGGTGGGGGGCCTGTGGGTGGATGGGTGTGGCAGCCACAGAGGCTGGGATAGCTTGGCACTGGGGTCAGGGCTCAGCCAGCCTGTGTGCCTTCACACCTGGTAATGAGATCACTTGTAAACAATTTCTG-TTTGTCAATTACAGGATACA------AAAAAAGAAGCACGGAAGGAAAAAGAAATTTATGAACAGGAGGCAAATGCCTCAACATTTCATAGAAGGAGGACTCCATTGGATAAAGACCTTATTAATACGGGGATCTGTGAGTCTTCTGGCAAACAGTGTTTGCCTCTGGTTCAGCTCATACAACAGCTTCTTAGGTAAATCATATTAGCTGTATTGTAT s mm7.chr7 52357034 364 + 141766352 AAAGAGAATAATATATTTAAAACCATAGCAACCAGAAGGTGGAGTTTCTGACAGGGTATACAGGTAGGC-ATGGTCAGCTGTTTGCATCAGCAGCTGAGGCTCGGACTG-----------------------------CTGTG-----------CTACTGATGAGGTCTCTGTTCACCAGTTTGTGTTTTATGAATTTCAGGATATAGAAGCCAAAAAAGAAGCACAGAAGGAAAAAGAAATTGATGAACAAGAAGCCAGTGCCTCCACATTTCATAGAAGTAGGACTCCTCTGGATAAAGACCTAATTAATACTGGGATCTATGAATCATCTGGCAAACAGTGCTTGCCTCTAGTTCAACTCATACAGCAGCTTCTTAGGTAAATAGTATTAGCTGTGTTGTAT a score=3954 s hg17.chr15_random 216929 161 + 784346 TAGTGAAATCTAGCGCAAGGGTCTCAAAAATTTGTTTGATGATTGAAGGAATATTCTGAAAATTACCTAGTATAGA-TGTTAGGATAAAGAGCAGACCCTTCTCAATATAGGTGAGAGGAGAAGT--TGGAGGGTGTGATGATACTCAGAAGTT----TTTCACAGAA s mm7.chr7 52357427 166 + 141766352 TAGTGAAATCTAACACTAAACCCTGAAGAATGGGTTTAGCTGTGGAAGACTTACTCAAAAGATTATCTAGGATAGAGTTTTAGAGTGAAGAGAAGG--TTTTTAAACATGGCTAAAAGGAGAGGCTATGGAGAAGTTTGTAACACTTTACAATTGAAGTGTCATAAAA a score=1224 s hg17.chr15_random 217164 26 + 784346 ATGGAAGGTTATTTTTAAAACTGGTT s mm7.chr7 52357836 26 + 141766352 AGGCAAGGTTACTTTTTAAAGAGGTT a score=4563 s hg17.chr15_random 217235 215 + 784346 TTGTAAGATAACTTTTCTTTTCAAAACTGAAGTCAATGTGATAGAATGGTGAGCATTATTTTGGAAGGCCAGACTAGGAGGAGGTGGGAGGAGGAAGTCAGACTCAGCCTGTGAACAGACGCTAACCTTGGCAGAAGCCAAAACAGTCAGACAGTGTTGTGTAAAAATGATCATTCAAGAAGAGCGAAACAGCAAGGTGATTTGTGAAAGAGATT s mm7.chr7 52357963 188 + 141766352 TTACAAGATAAGTTTTAATTT--AAATTAAAAATGTAATGAAAGAATAGTGAGCGGTTCTTTGGAAAGTCAGTTTCAGGTGTAGT--AAGGATGAAATGA-ACTCAGACTGTCATCAAA-GTTAACCTGGGGAAGGGTCGA---AGCCAGACATATTTGGATAAAGAAGATAATTCAAAAAG------------------TCAGTGAAAGAAATC a score=1357 s hg17.chr15_random 217462 88 + 784346 AAACACATTTATACC--TCTGTTCAATAAAAATCTGCTTTTCGTCAACTGATGCTCCTGGTTTTTGTTTCTACACATAGAGAAAGCAGAG s mm7.chr7 52358312 79 + 141766352 AATCACATTCTTAACATTCTGTTTTCTGAATCTAGGCTCTTTGTTTATT-ATGCTTTCAGTTTTGG----------GAGAGGAGGCAAAG a score=2255 s hg17.chr15_random 219184 32 + 784346 TTTTTTTTACTTTTGTTAATGTGACTAAGAAC s mm7.chr7 52361452 32 + 141766352 TTCCTTTTACTTTTATTTATGTGACTAAAAAC a score=10388 s hg17.chr15_random 219861 382 + 784346 GTGTCCCTCTCCCGCATGGGTAGACACTGTTTTCTCACCTTAAGTGTTTGTGAGTGAAGGATTCTTGATGTGTTGACTTGGCAGATGCAGTTGTTGAACAGTAGTTTATCTAAAGATCGTAAGAGACTTTTGGAGACATTTCATGTCCTTTTTTCCCTTGGAAAACGTGAGTTGGAGAAATCGCTGCTTGCCAAAAATAAGCCGTGAAACGTATTTCAGAGTAGATCGTTATTTACTTGCTGGCGAGGAGCCACAGAATACCATTTACATTTGAAAAT---AGAGCGCTGCAAAGTTTTTATAAGTAGTGAATCCCATCAGAATTACACATTTTGATTATGGCTCtaaattttatatt-----aaataaactaaaaatttCATTGTATTG s mm7.chr7 52362045 361 + 141766352 ATGTGCCATTTTTATATGAATAGACATTTTGTTCTTCCAGTAA-------TGATCAGAAGATACTTA---TATTGACTTGATTAGTTCAGTTTTTACAAAATAGT----CTAAAAAT-ATAAGAGAACCT-AGAAACATTTCCTGTCATTTATTTCTTTA-AAAATGGGAGTTGATGAAATTGATCCTTGCTAAAAATAA--TGAAGAACAGGTTTCAGACTGATTCTTGAGTT-TTTGCTGGC-AGGCACTACAGAATATTATTTACATGTGAAAATAAAAGAGTCCTG--ATGTTTTTGTAATAAATGAACTCT------ATTACACATTCTGATTATGGATCTGAACTTTGTAATAAAGGAAATAAACTAAATTTTTTATACCATTA a score=3755 s hg17.chr15_random 220245 297 + 784346 TTACCGTCTCTTGCTCCTTCAGGTGTAGCATACATGCTAGATTCTAGACCTGTTTCTTGTGTTACAGTGGTGTTATCCAGGCAGGGTATCATGTAGTGA-------AGGTGATGTCGAGTGGTGGTGGTGAGCCCAGTGAAGGCGCATCCTTGCCGTGTGTGATGAGGGCCTGTGGGTTGCTATG----------------------------GGATTCCC----CAACCCTGGCTCCTC---TGTCTCCTGC--TTCTGTCCTTACTCACACTGCTGGTAGTTTTCTGGTGTGAGACACGGGGGCAAGTGGGATTGACA--------------AGCCTGCTGTCACATTAGGAA s mm7.chr7 52362580 331 + 141766352 TCGCCAGCTCCACCCCACTGAGATGTATCTTGATTGTGAAATTCTAGACCTATTTCTTCTGTTGCA-TG--GTTGTCAGGGCTACTTACCAGGTAGTGAGCTTGCCAGGGGAGGTCAAA-------GGGGACCTCACTATGTGT---TCCTTGTAATGTGTGATCAGG----GTGAGTTCCTATACCTTAGCAAATATTACAGTGTATAAGTTAAATTACTGTAGGAGCCCTGGCTACTCAATTTTTTCTTACTGTCCTGTCTTCATTCACATTGTTCAAAGTTTT---GTATCAACCACAGT----ATAGAAACTATCAATATTTTTTTCAATAGTCTGCTGTTACAGTAGGAA a score=5402 s hg17.chr15_random 220777 212 + 784346 AGCATCCTTTCAAGTACTGGGGTACACCCAAGCTCCCAGCTTCTAGCTAGGAGTCATTTTGTCCCTCTTTATCCCAAAGGACTTGCCACCATCTTTGGTTCCCAAAGCCCAGGAGGGTCCAGGCTCTTCAGCCTCCAACCACTTTGCATTTCTTGTCTGCTTTTCGTTCATGGAGATAATTAACTTATTTTTCAGCCTGGGCATGTCTTTTT s mm7.chr9 68748440 193 - 123828236 AGCATCCTGTCGAGGACTGGGGT--------GATTTCTGGCTCTTACCAAGGGTCTGCTAGTTCCACTTTATGTGAAAGGACCTACCCTTGCCTTTAGCTTCCAAAGCCCCACAGGTCACAGGCTTT--GGCTTTC--------TACATCTCTTTCCCGGTTTGGGTTCAGGGAGAAGACGAACTTATTTT-CAGTCCTGTTAGGTCTGTGG a score=1713 s hg17.chr15_random 221303 674 + 784346 ATTTACTTTGTATATCTCATCTATTACTGCTGCAGTTTGCAGAAGAGAGGATGCCCTCAAACCTAACTTCTCCAAACCATCCCAAATGGGAAGTCTGCTCCACGTCAACAGCAT------------------TGTTGCTTTTAAAGACTATACGTCAACATGGCAGATTATAGCAAAAGGATGTCGAGGGAGCAATAGGAAAGCAAGCCTGAGAGTCCTGGAGAGAAGGTGGCAGAGCTGCCTTTT----------GAAGGTGGTTCCTTCCTCAGACCCTG----CCCTTCCTGCCTTGTTCCTCCAGTTGCCAGATTT-----------------------GCTGTTGGAGCTCCTCCAC--------GGGCGAAGAGGTGAGGCTGGACTGAGAGGGAGATGGAGAAGCTGCCAGAGATTCTTTTGGATCTAGAATTGAGACAGCA--GTTCCAGCCAGGTCCAGA--------GGTGGGGG----------------------------------CTGTCAC------------CCAGCCCCCAGGGGAATGGTACTGATTGCAGAATGTGGCGAGAACTCCCTGGCTGGGAGAGGGAGGTGCTTGCTCCCTTGAATCACCTGAGCCCAGGCTGGAAGGCCCAAGGGGGAGGA-----CGAGGCCAGCTCACTC-CAGCTCCA--TCCCCTCCCTTTAACCCTAAGCTAGTTAACCCTCCCAGACTCCAGTCCTTTTTCCTAAGTGC----------------CCTCCCTG--------CAAAGTCTGCACCGAGC---AGCGCTCCCTCGCACCA-----------------------GCTCACCC s mm7.chr9 68748633 755 - 123828236 GTTCACCCTGTG-----AATCTGTTATTGCCGCAGTTTAAGGAGGAGAGGATGTCCTCAGACCTATCTTCTCGGAACCATCCTCAAGG------------CATTTCATCGACTTCTGTGCTTGTTGGTTTGCTTTTGTTTTTAAACTCC-CGTGCCAACATGTCAGATTATAGCAAGAAGAAATCATCGG-------GGAAAGCGA-----------CTGGACTT------------CTGCCTTATTTTTAGGTCCAGAGGTCGTCCCTTCTCCAGGCCAAGTAAGCTCTGTTCACTTTGCCCCTGAAGCTGCTGGGTGCCCCTTAGTTGTCCCAGGTGCAGGGCTGTTTTGACTTGTCCTCTAACTTTAGATCCTGAAACTTAGCGTGGACCACCTAGGAGTGGGAAAGGCTAATGTATGCTTCTTTCAGCC----ACTTAAACTGCCTTGGGTAAGCCAGGCTAAGATTAAGATGGGTGAGGGGGACGCAGCCTGCCCTCTCAGACCCTCCCTTACCCTGTAACTCCACCCCTTCCCCAGTCCCCAAGA----------------CGAATGAGACAAGAGCT------------------AGTCCACCCTCCCGAGTGCCACGCACTACCCGGCT------CCTGAGTGTGAGAAAGTCTCGGGACCA--TCATCCATAGCCACAGGTTCCCCCAGACACACCCTGCTCTGGGT--CTACCCCAAACTCCAGTTCAGTCCTCTAAGTGGGTGGGACCCACAGCAGCTTCCCAGGTGGGGAGCACAGGCTCCATCGGGTCCTAGTGCCGCCGGGCACAGAGAGACTGCCAGCTGGGACAGACGCTCACTC a score=23095 s hg17.chr15_random 222070 2032 + 784346 GCTCTGCCAGTTTTGGAGTGGGGGCCGACTCTTCTCAGAGCCGCTGCAAGGGCCA-GGGCCACCCTCCCAGGCGGGTGTCTC--------------TGGGCTGGGCAGCAGCTTTGTAGGCA---------GCCTGGGTCATCCCCACTGGCCTGGGAAGCTGGGGGTGCACCGGCTCCTGCTCCTGATAGGGCCAAGGCACCTTCCTTACCTAAGAGCTGACTTTCTTGAAGAGTGGGCACAGAGGAGCCGGCAACCTGGGCTGTGTAGGCACCCAGGAGAAAATCTGCAGCTCAGTATCA--------GAAGT-CTCCACCAGC-ACGGCTGTTGCAGAGATGGGGAAACTGGGCTG------AGAGGGAAGGGGGCTTGCCCAAATCACCAGCCCT----------GGAATGTTTTGAGCTTTGGGGGTGGATCTCCCAGGAA--ACGTGTTTTATGG-CACCACCGCCTCTGGTCACCCACCCCGAGGTGTGGCGGGCCTGGACAGCCAGCTTGACTGAGGGCCAGGCTGGTGAAGTCAAAACTACCACTCAGGAA---------------GAAGA------CCTAGCCCTTCTCCAGACAGAGTTCA-------AATGTGAGGACTGCCTTCTTTGGGCCTCAAATTCCC---CACGTGAATTCCAAGGACCCCTCTAGCTCCTACACTC------------------TGGGCCAAGGTTTCCTCTGAGCCGCAGTCAGCCTAGAGGACCTAGGATACATCTTCCTTGGACAGAGACCCACCATAGGGGCAGCAGGAGGTAGGGGTGGGGG-TAGGCAAGATTCCTGTGGGGAGGTGGAGCTGTCATCagagatggtgtctgcaggcagtgggtgtatcgtggctctgctactacttgctgggtggccccatgacgtttctttccccactctgacctcagtttccctatctgttctgtggagataagatgcctgcctacatatttgtggactgggatgtgtGTGGGCCAGTTGCAGTGTTTCTTG-GTGTGGTCCTG--GGGCAGGCTGCACCACCCCATAGagatttctgggccccaccctaggctcacaggaccagaatctctgggaatg-aagcctgggaatttgcatttccacaggcatctggctgattctgaC--ATGACTGAA-AAGCACTAATAGTATATAGCAAGCTCTTTATAAAA-----------------GGTAAATTCATAGCTGCCTTTTACTAAACATA------AATCTTACCTTCCCTTCCTCAGTTAAGGACACACACCGCAGTTGAAAATCACTGTGCCTTTCCAGATGCAGAGTCTGACCTTTCCGATAAGATTCTGTTAACTGCTGCTTTCTGCAGTTTGTATTCCAAAACAAGGGGAATATGTTTCCATTTTTTCAATACAAATGTTTAAGTCGGATATGCTTTCTCAAACTGGACACACACTCACACAGCTTAGGGTTTCAGCTATGGCT-----TCCTCTCAAATTATTAGCCTCT------TTCTGCCAGGGAGCAGTTTTTCCCAGA--------------CAAGACCCTGGACAGAGGTTGGTGGGGCCCTC--------CTCATCAGAATCACTAGATTATGACTGACCCCTAGAGGTGGCTTTTCTGCTTAAGTGTCAGCCCATGGGCTGGGTTGTGACCCCCAAAGCTGCGGCAGAAGCTTCCACCCATCCTGGGTCCCCCCTGCCATCTATGGGGAAAGGCCTGTCCCTTGTCTTCTGGGCCCAGCCGGC-CTCACAGGCATTC--AGCAGATTGGAAAGTCGAAGCATGTGCTGTGCTTGGCTGGGCTCTCCTGCGCCCCTTTTTGGGGTGA---GGTGGAGTGCATCCAGCCCCCGGCATCCCTGCCGTTTATTCCCACCCCTCATCCCCACCCCCATACACACTCACAAGTACAAACACAAGCACAGTCACTGGCACACACCACTCTGGACAGCACCATTTCCAGCCTCAGCGGGGCAGTTTCCTTACAGGG-AAGTTAAT-GAGGCACTAACGAAGGCTCAGGGGACAGGGGGAACCTCTATCGagaagaggctcctagacctggttctgcctctgaattgctgggggtccttgagaaagttgctatccctctctggtctcagtttcctcaggtgagaaatggggggccggccaaatggtctaagg s mm7.chr9 68749465 1877 - 123828236 GCTCTGC----TTCAGCCTGGTGA---GTTCTTTTTAGAGAAGGTGGGAGGGACAAGGGTCGCAGTGTGGGAGGAGTGGCCGGACCAGCTGGGGAGTGGGCGGGGCA--AGCCCTATGGGGATGCAGGCTGGCTTGGGTGGG------TGGCCTGTGAGGTTTGGGGTCCCCGCTACCTTATTCC--ATGCTGCCAGGTCACCATCACTGAC--------GAGTGTCTTCAAGC-TGGGCAGTGCAGATCAGTC--CCAGAGCTAAG-AGGTCCCCAAAGGGTCCTCCGAGGCTC--TTTCAACTCTAGTGAAGTGATGAACTTGCTACGG----TATAAATGTGTGGGAGCAAGCCTGCTGTTTGGAGAGAGAGAGGGGTCACCAAGACACTAGCATTCCATATGTGCGAAGTATTTTTGCACTTTGGGGCAGGTCTTCCAGATATCACATATATGGTGGGCACTGCCATAGCTGGTCCCTAACCCTG-------------------------CTTAGCTGAGGGC-AGGTTGATGAACTGGGGTCTGCAGCTCACAAACTTAGCATTGACACTGAAGAGACTCTCTCAGCTCTCCTCC---CCAGGTTCACTCAGACACAGTGAGGGTT----TCTTCCAGACTCAGCTACCCTCCCCCTTAAATTCCAAGGTCCTTCGTAGCTTCTACCCCCACCACCTCAAGCTGTGTGCACACCAGCTTGTCCTCTGAGCTCCAATGGACCCAGAGAACCAAGGCTGCATCTTCCTCCCATAAAGATCACATCCAGAAGGTACTAGAATTAGGAGTGGGGAACAGTCAAGGTCTCC-----------------CAATCAAAG-TAGTGTTGGCA--CAGTA--TGCATTATGGCTTTG-GATCACT-GCTGGGTGCCCCTATTCTGTTACCCTCTC----------TCAAGCTCCTTATCTGTTCCATGACAACAATCCGCCT-------TGCCTGTCATCTGACA---------AACACTGGCAGTATTTCTGAAGTATGGTCCCACTAGGCTGTCTGCACCTTCCTCtacagactcctgaaccccagcctaggctcaggggatctgaacctctggaaatggaagctggggaattggcttttatatagcca----ggtgattctgacctgtgattggagaagcactgATAGCATTTGGTGAGTTCCTTCTAAGACAGCATTCTGAGTTTCTAAGATGCTCACAGCCACCCTTTAGCGAGCACATATCTGCATCTCACAGGCCCCTCCTTCACTAAGCACATGC-CCTCACCTGGCAAGCCCTG---CCCTTCAGATACACA-------CTTGCCAATGAGATTCTGTTAACCGTTGCATCCC-CAG----------------------ATAGCTCTCTATTTCT---------------AGATTGGATATGCTTTCTCAGACTGGACACACAGAGAGACA-CTCACAATTCCA-CTATGGTTAAGAATCCTATCAGATTCTCAACCTTTCTCCTTTTCCTCAAGGGAGCATTCTTGCCAAGGAAAATCTCCAAAGGCAAGACCTTGTGCAGCAGCCAATGGGGCTCTCGTTTTTTTTTTTTTTTCAACATTGTATCACGA-TGACCTCTAGTGGTGGTTTATCTGCTTAACTGTA-----------TAAAGTTTGACTCCGTGAAAGCCCTCAGGAGCTGG---------TGGTGACCCTCTGACAT----------------GTTACTTATCTCTTGGATCTGACAGGCTCTGGAAAGCATTAGGAGTAGATGGCAAAGTCTGCCTATGTGCTCT-------TAGG---------GTTCCCTTTGGAGGTGAAAAGAGGGGGTGCATTTCAGCCATAACAGCCCTGCTGGTCATTTC-ACTTCTCTGCCCCATCCACAGGCATGCTAACAAACACAGACACAAG-------------------------------------TGATAGGCCCAGCAGAGCAACCTCCCTCAGGGGCAAGTTAGCAGGGGTATATAAGCAAGTACAGGGGGCAGGGAGGGCTTCTGTCTTAAAGAAACCCCTGGACCTGGCTTTG--TTTGACTTGCTAGAGC---------------------------------------------------------------CTAAATGGTCTAGGG a score=40125 s hg17.chr15_random 224102 1344 + 784346 ttcTGGGAACCTCTAAATCAGAGCCCGTAGCTGGTGGTCAAGATGAGGGAGAGGCCCTCAGGGTCAGCCGAATGCCTGAGAGGCAGGACAGGCCCAAAGGTGAGCAA----CGTGAGCACATCAGGTGGGCTCAGAGCTGGCGCATGAGCCCCACAGCCTGCAGAGCAGCCCTGTACTCGGGAGCCCGCTCACACCCACCCAGTGGGACTTCAGAGATGTGGGGTCCAGCCTTTCCTACTATTGCTGGGCTGAGGGCTGGGAGCTGCAGATTCTGACCCCACAGCTGCCTTAGACATGCCAGATGG-TCTGGGGCAAGACACACCCCTCTCTATGAAATGAGCAGCCAGTCCAAATAGGTACATTAGAGAAGGGCTGTGGGATGGACCCAGCTGTAGCCTGGGGCTACAGACTGGCTTCCGGGGTACTCAAGCAGCTGGCCTCTGGGGTAGCAGCCCCAGGTATGAGAGGCAGGACTCAGAATCTAGGCCAAGCCT--CCATAGGAATCCCCTCTGGAGAGCCCGGGCACTCTGC---------AGGAGGGGCAGCAGGCAGCAGGTGCACCAGGAGCATGTTTCACAAGGTGCCCAATATCGCATCTGCTC-AGATAGGCAGCGAGTTGGAAAGTGGATGCAATAGGCAGGGTGGCGGCTGCTCCCCACAGCCAGGAGTCCGGCCCAGCACCCACCTG--AGTCCGCCTCAGTCCTGCTCAATT-GGGTTATCCGTGCTCTTGGCCCTCTGGTCCCACCCACAGAGGGAGGTCTTTGGGGCGACCAGGTGAGCTGGCCCTTGTGGGAGGATGTAACT-GACTCCTGAGCCTGGCGAGCCAGGCAGCCCCTCGCCAACATCCCCACCCCTACCTCTCCAGCCCCCCCGCATTCCCTGATCCTCCCATCCGCTCCCCTGACCCAGCAGT--TGCCTCTGCTCAC-----TCTCTTTTCCTGCTCCCAGGCTCGCCTGGTCATGTGTCCTTCACTCTCCTCTGAGTCTCCCTCTTTC-CAAGCCGCCTCCACTCTACTTGACACACTCTCCCTTAAGACACCAGAGTACACAAGCGCAAGTCCCTGCACCTCACCTTTAC----TCCCAGACATGGGAGGGAGATGACATGAAGACCCAAACGCCACTTAGCAGGAGATCTGGGGTATGCAG-AGGGGCAGAACGGAGGCTGTGGAAGCTCCAGGGGCT---------CCCTGCAGGAGGCCACATGTAAGCTGGCTATTGAATGTGGCTCTGagctgagacctct-ccttgaagctccagaccaggagccagctgctagctggacccctccatttggtgcctcagagaaactttgcactctgtaggtctaactttgaacccagaaaa---------------------ttcccccatgtc s mm7.chr9 68751547 1341 - 123828236 TCTAGGGGAACTCTG-----GGGTCCATATTTGGTCCATGAGATG-GGGAGAGTCCCTTAAG-CCAGCTAAATATTAAAGAGA----ACAAGCT-GAAGGTGGTAAAGATTAGTAAGTACCCCAGGTGGGCTCAGAGCTCAAGCACAACCCCCCCACCCCGCCC--CAGCCTAGAAC-CTATAGTCCAGCCAGACTAGCCTCCCGGGGCAGCAGAGATA---GATCTAAGCTCCCCTAGAATTGCAggactggaggctgggtgctgcagagcct-atcccagtgctgccacagac-tgccaggtagacctttgacaagttagactcatctctatgAAATGAGAGGTCAGCTCTAATAAACA--------AAAAATTGTGAGAGGAACCTAGATTTATCCTTTGGCTACAGATAGGCCCCAAGGGTATTTAAGCTGGTGGCTTGTGGAGAGGGAATTGAAGCTGTGAGGAGCCAAGCTCAGAATC-------AGTCTACCCATATG--------CTGGACAACCCTCCCACCCTGCCCCCAACCCAGTGTGGGGATGGGGCAGCAGGTGTGCCTGGAGCATCTTTCTCAAGGCCCTAAATATTGCATCTGTTCTAGATAGGCAGCCAGTTGGAAAGCGCGTGGAGAAGGCAGGGTAGCGGCTGCTCACCATGAACATGTGGCCAGCCCAGCACCCACCCACAAGTCTACTTCACCTTTGCTAGACTAGGGTGATTCACATTCTAAGTACT-TGGCTCCATCCAAAGAAGGGGGTGTTTGGTA-----AGATGTGAAGGCTCTTTAGGAAAGATCTGACCAGACTCCTGGGCTTGGTAAGATAGTCAGCACCTCACCAGCATCCCTACCCTGATCCCTCTAGCCTTCTC---CTCTTTTAGCATGCTACCTGCTCTCCTTCCCTGGCGGTGTTTCTTCTGACCATCCTCATCTCTTTTCCTGCTCCTGGGCAT-CCTGTTCATGTGCCCTTGTCCTTCCTTCCTGTCTCCTTCTTTTTCATGTCCCATCC--TCCACTCTCCACAGTCTCCTTAATGACATCATAGTACACAATC--CAGTCCTTAAACTTCACCTTTACCTCATTCCCAACACAAGAGACAGATGAAACAAAGACCCAGATACCACTTGGCAAGGAATCTCGGATGCACAGGAGGGACAGATCTTGGGCTGTGGGTGCTCGGAGGGATGATGTCTGTCTGTGCAGGATGCTGATCTGGAGCTGG-TCCTCAATGTGGCTTAGAGCCAAGAACTCTGTCTT----------ACCAGAAACCAGCTGCCAGCTGGACTACTCCATTTGATGTCTCAAAGAGACCTTGTGTTCTGTAGGTCAAAGTCTGGATCCAAGAAAGGCTCCCCTAGAATAACCTTGTTTCCTTATTTC a score=2413 s hg17.chr15_random 225446 68 + 784346 ggccctgtctcttcacagGGAAAGCACCACCTCAGACCCAGTTCTGCACCAAACCCACATTTGAGTCA s mm7.chr9 68753190 68 - 123828236 GGCTTTTTGTTTTCTCTAGGAAAACACTACCACATACCCAGCTCTATCTACAGCCCACGTTTCAGGAA a score=2191 s hg17.chr15_random 225603 333 + 784346 AACTCCACCTCCAGCTCTGAGAGCTG-TGGGTAGGGAAGGGCCCTCGTCCAGTTTGCTGTAGAAAGATCAGTCTGCCACTGTATGGCACATGGATGGCAGGGGCAGAGTGCAGGTGGAG--------AGAATAGAAGGTGGG------CAGGGCGGGGGAGGCAGGGACATG----GCTGTAGCCGTGGAGATGGGAGGACAGAC--------------------------AGGACTTGGTGGCCAC---TTGGGTGAACCA---------AGGGAGGAGTCAGGAAGA---GACACCCAGTTTTGTATCAG-ATGTGTAGAGCGTGGGATGCTGTTCATTGACGGAGGGAGGAGGAGGAGGAAGAGATATGGCATGG-GGAGGAGGTAGCTGAG s mm7.chr9 68753353 374 - 123828236 AACTCCACTCAAACGTTGGTCAGCTGGTAGGCTGGGAACAATCCTGGTGAA---------AGAAAGGGTATACT-------CAAAACCCGGAAGTGAGACGGGTAAGAGGCAAGTGGTGTGTACGCCAGAGAAGAGTCTGGGGCAGTCCAGGGCAGGAGAGGTAAAGGAACGCTTAGCTAAAGG-GTGGAAATGGAAGGACAAACTAGAGGAGTTGGGAAGTGGAGCAGATAGGTCTCAGTGGCCGGGGGTGGGGGGAGACATTGGGGTTGGGGCAGGAGTAGAGAAGAACAGATGCCCAAGGTTGGAACAGGATGT-TGCAGCAGGGAACAGCATTTGCTGCCAG---GAAGAGCACAAGGAAGAGGTCTGTCCCGGAGGAAAAAATGACACAG a score=14983 s hg17.chr15_random 226005 305 + 784346 AGCTCTCAGGGTGTCTGTGCTCCCTGGCCCTCTCAGCTCCTGCTTCATAGCTGTCA--GCTGCAGTGGGAGACAGCTGCACAAGGGCCCAGCATGTCTG----TGTGTTTACCCAGGGGACTGCCGCATGGCCCATGCCGAGCAGAAACTGATGGACGACCTTCTGAACAAAACCTGTTACAACAACCTGATCCGCCCAGCCACCAGCTCCTCACAGCTCATCTCCATCCAGACGGCGCTCTCCCTGGCCCAGTGCATCAGCGTGGTAGGTGCAGAGGGTACCTGTGG-CTCAGGCTCAGGTGAAGAGGAAG s mm7.chr9 68753888 306 - 123828236 AGCTC-CAGGGCTCCTACACTC--TGCTTCTCACAGCCCC--CCTCTTCGCTGCCACAGCCACAGTGGGGTTCCTCCAGACAAGGGCCCAGCACGTCTGACTATACGATTTCCCAGGGGACTGCCGCCTGGCCAACGCAGAGGAGAAGCTGATGGATGATCTCCTGAACAAAACCCGCTACAACAACCTGATCCGCCCAGCCACCAGCTCCTCCCAGCTCATCTCCATCCGCCTGGAGCTATCACTGTCCCAGCTCATCAGTGTGGTAGGTGCCT-GGGCAAATGTGGCCTGGGGCTTAGGAGAAGAGGCAG a score=15756 s hg17.chr15_random 226310 1425 + 784346 CTcatgcccaagccctaagcagtcaatgtccagaggaatgaaatgactagagttgacttagactcaccggtacacggtggggaggctggaggagggtccatgaggtttataggtgtccagtatttaatgaggtcatggttttgttaacaaagaagaaatgagggtgggagcgagatcaccactggctaggcagccaatgggcctgcATAGACTCTGCTCAGCTGAGTCTCCAGCACGACCATGAGCTTCTCCTCCTCATCCTCCCAGCCCCACCCTACTCTCTCCCCCAGCTTGCTCAACAGGTGACCTTATAGGCTCCCTACTCTTTGCAGGGAATAAGAACCAGACTGGGGGAACTGACGGGTACAGAGGCCCAGGTGTAGGCGCAGGACCACAGGCAGTGAAGCGTCTACTGACCCAGGCGGGTGAGGGTCTGGAGAGTGGGCATGGCTG---CTGCAGGCATGGAAAGCAGGCACAGATGGCGGCACTCCCAGGGCCCATTGTCAGGGTCTCCACATGTGGACATGTGCAGAGGTGGGGGTGCTGAGGGAGGAG---------GGGCAGGGAATTTCTCATCTT-CTCTCTACTGCC-TCTGAGT-TGGAGATGTCAGAGGGAGCCATGGCCCACTGTAAAGTAACACAATGTCCCCACCCACAGGATTAGAACCCCT-CCCCTGGAAGCAGCTCTGAGGGGAACAGTCACATGTAGAGAGTGCAGGGCACTGTGTCCAGCCGGGGGAAGGAGGTCACCAAGGGGGTTGACCCCCCTCTGGCCAGGTGGCTACCTTCTGACACACCAGCCTCTGTCTCTAGCACGGTGGCCCCCACACACCCAGCCTGTGAAACCTACAGCCCTCAAGAAGGCTTTGGCCAAATTAATGAGCGGCTCCCTCTCCCAGGAGGAAGCACGGGTGAAGGATGTGGAGGGCAGTAGAG-TTGTGTGTGCTCCGCCCCCTTTCTCCACAGTCGGATGGAAAGAAGGGGGCTTTCAGCCAGGCT-CGCCCAGCCTGGGGTCTGAGTGTCACTGTCCAGCTATTGGCTTCTTGCTTAATGGGTGAGCCCAGCTGCTCCCGTGCAGCTGCCGCCCTAGTGAGGGTGAACCGGCAGGCG-----AGTTACATTTCTGAA------------------------AGCCTGGGAATACAGTAAATATTAGG-----------------------------------------------------CTGTGGGCTG---------------------CTGGGC------CAGGAAGAGTTGTTTATTTTTCAGGGTTTGTTTATCTATTGACTTGATGAGGGAGGGTTATAGGTACAACCAGTTTAAAGATGGAAATTTTGAGAGAGCAGGCAGGGATTTAGTGCT---GGGTAAGC---CTGGTCAAAGCGGCTCTTTTGG----GGCGGCCAGAATCCAGTACCAATGTCCTCAGCATGTTCATCAGCTGctggggg----------agtgcgggacagcatgaaagcacaggagaactttctggatgatagaaatactctgtatcttc s mm7.chr9 68755465 1346 - 123828236 CTTACATCTAAGCC-TAACCAATCATTGGCCAGAT------AATTACTTTGGCTGGTTTAGATCTGTCAGGGTGTGGCAAGGAGAC------------CATGAGGTTTA---------------------------------GTTGTGAAAGAGGAAA-----GATAGAGCAGGA---CCATTAGGCAGGCATCCTATGGACCCCTTGTGGCTCCCTTTAGCTGGGTCTCCAACAG-------------------------TCACAGCTCC----------------CAGCTTGCTCAG--AGACATCCTCCATGTTGTTAATTTGGTGGGGGAAATAGGAACCAGGCCAGGAGAA-TGATGGGTACAGAGGCTCAGGCCT----------------------------------------GTGGATGAAGGTCTGGA---CGGGCACAGAAGGTTCAACAGGTGTGGGAAGGAGG-----GTGCCAACATTCC---------------AGGTGTTCCAAGCTGGA--TTTGAGGCAACAGGGGCACCGAGGAAGGCGAATGTGAATGTGATCGTAATTTCCTTCCTTGTTCCCCACAGCTATCTCAGCATGGGGTTGTCTGAAGGAACCGAGGTCCCTTGTAAACCTTCCCA-TGTCCCCACCAA-AGGGTTAGAACCTTTGCCCCTGGAAACCACTCAGAAGA-AGTGATCACATG------------GGTGATGTGTCTAGCCAT---CAGGTGCTAGCTGAGGGAGGCAGGCATCCTCTGCACAG-----------------TGTCACCTTCTCTCGCCAGCCCAGTGAGCCCGACAGGCTCCGCTTCTCCCATCTGTACTGCTCAAGAAAGGTTTGCCCAAATTGGCAGTTGCCTCTATCCCCTAGGAGGGAGCCTAGCCCCAGAGTGGGAAGAGGCACACAGCCTGCCTCTGCTCTTTCCCTGTCATGGAAAGCTGAAAGCAATGAA---GGCTTCTGACCAAGCCACACCAAGACTACTGTCTGAGCATCCCCGACCGGC-AAAGGCCTTGTACTTAATTAGCAAG-CCAGCTGC-------------CTGCTCTGGCAAGGGTAGACAGGCAGGCAGCTCTGGCCACACTGCCAGACTCAGACTGTTCCTGCCAGATCTGAGCTGTGGACCCTATGGAGTAATAGAGGCTTCCAGAAGCAGGAGAGACACAGCCTGCAGCTTCACTTCTGCAAGTGCCCCTATGGGCTGTCATAGCCCCAAAGGCAACCCCTAGGCTTTCTATGGGGAGAGTTCCCTTCTGGTTTGGGGAAATGTATTTG--GTTCTGAGGAGTGAGTGTTAGAGGCCTAGCCAGTTTAAAGATAG-AATGTCTAGGGAATAAACTAGGAGTTTGTGCTGGGGGGCAAGCAATCTTTCCCACTCTTCTCTTTGAGGACTGACAGCCAAGGTCTTATACCACTGTTCT-GTCACATTCAGCAGCCACTAGTGGAGTAGAGAAAAGTAAGAGGCAGAAGAAATGCACAGGAGAAATTTCTGGAAGATAGAAAAGACCCATATCTTT a score=11187 s hg17.chr15_random 228146 419 + 784346 GGACAGATGAAGGTTTTCAACTTTCAATAAAGGCAGAGGAGCTTGTTACAGATTCGCCTCCCCACAAGAGCAGTTAGAAAAACTGGATAAAAATGTGCCCCGCCCCCAATCAAAAACAATTGTTGGAAGGTAATTGGAGACCTCAGTCAGGACTTGAGTGACCAG-GCCTAGGAGGTGATCCTGACAGTCTGTAGTGC--TTTCCCACATTTGGTGATTGGTCAACAGTAGAGGGCTAAGAGGCTAAGAAACTGAGTATGAAGTGGTAGTTAAGAGGCTGGAGAGCCTAGCTGAATGTTTGGCACTCTCACAGGGCTGAAATGA--CCTAATGAGAATTTGGGTCCCAGGAGGGAGATGGGACCTTGGTGGGGACCCTGGAAGGGCCACCCCTGGGAGTCCAAATGAATAA-AACA-TAGACCAGC s mm7.chr9 68757559 370 - 123828236 AGATAAATGGAGGTTTTGAGCTTTCATTGATGGCAGGGATGCTGG----------AGCTTTTCTGAGGAACAATTAGAAAGGCTGAACAAAA----------------------------TGCTGGC------------GCCTCAGCCAGGGCTTGAATGGCCAGCTTCCAGGAGGCGACCCTGACAGCCTGTGGTGCCTTTTCCCACACTTGATGGCTGGCCAACAGTATCTGCCTAAGAAGCTAAG--GCCTGGAACAGAGCAGCAGCTGCGGAGCTGGGAAG-CTGGCTG-GTGCTGGGGGCCATCCCAGGGCTGAGAGGATGCTCAAAGGCAACTTGGATCTGACCAAGGACATAGAAACCTGGTGGGGCTCCTGGAAGGGTCACCC--AGTACTGGAAATGAGCAACAACAGTAAATCAGC a score=16179 s hg17.chr15_random 229191 328 + 784346 TAGATGGCAGCTTCCAGGTGCTCCTAAGGGGCCAGGAAAGAGAGTGAGAAGGCACGGAGGTTGCCAGATCATCCCCCTTGGGGCCCCGCCCTCATCAACTCCCTCAACCGGGTCTCCTGCAACTATCGGTGGGCCATCTCGGCCACCGCTTCGCCCTGAGCTTCCTGCTGCTGCAGCTGG----------------------------------GCAGTGCCTCCTTCTCAGAGGCCAGCTGCTGATAGGCGGCCA---------------------CGTACTGCTGCAGGTGACCCAGGTAATGGTCTCGCTGCTGCTGCAGACTC--AGCCTCTTGGCTCTTCAGCTCCACCTGCAGGATAGGCGTCAGGGTAGGTAGTGGCT s mm7.chr2 150235975 380 - 182548267 TGGCTGGTAGCTTTTAGGCGCTCCTATGGGGCCAGGAAAGAG--TGAGAAGGCACAGAGGAGGCCAGGTCCTCCCCCTGGG---CCCAGCCTTAACAGCTGCCTCACCTGGGCCTCCTGCAGCTCCTGGCGGGCCAGCTCGGCTGCCATCTTGCCCTGTACCTCCTCATGCTGCAGCTGGTCCATGAGCTGAGTCTGCAGCAGAAGCTGCTTGTGTATTGCCTCCTTCTCAGAGGTCAGCTGCTCATAGGCCGCCAAGTGCTGTTGGTAAGCAGCAGCGTACTGCTGCAGGTGGGACAGGCACTGGTCTCGCTGCTCCTGTAGACCCTGTGCTTCTTGGCTCTTGAGCTCCACCTGCAGGACGGCCAGGAATGAGGGCAGTGCCT a score=2750 s hg17.chr15_random 229802 66 + 784346 GCTCCCCCCAAGA---GCTCGGCCTTCTGCCCCAGCTTCCCCAGCCTCTCCTCCAGCTCCTGCAGCCTC s mm7.chr2 150236678 69 - 182548267 GCACCCCCCGTGGTAGGCCTTACCGTCTCCTTCAGCTCTCCCAGTCTCTCCTGCAGCTCTCCCAGCTTC a score=5947 s hg17.chr15_random 231447 183 + 784346 tctcctcctgctcctgtatcttctcctcccgctcctgtatcttctcctcctgcctccacatcttctcctccTGTTGCTGGTTCAGGCGGTTCCACAACTCGTTCTCTTCCACCTGGGCTTGGAGCTTTGCTGACACACTCTGCAGCTCCTTACCCAGGTGGTCAGCCTCCGCCTGCAGCTGCT s mm7.chr2 150237142 183 - 182548267 TCTGCTTGCGCTCCTCGGCCTGCTCGCTCCAGCGCTGGGCCTCCCGCTCCAGCTCCAGCAGACGCCCCTCCTGCTCCCGGTTGAGGTGGCTCAGGCTCTCATTGTCCTGCACCTGAGCCCGTAGCTGTCCCGTCAGCCTCTCCAGTTCCTTGTGCAGCTGCTCGACCTCTCCCTGCAGCTGCT a score=1260 s hg17.chr15_random 232006 162 + 784346 ataaataaataaataaataaatGTAATCTGTAAAATAATGGTTTTCATCCATGATCCTttaaaaa--aatatttttaagccctaactcttgagattctgattccccaggcagggccccaat-ttgtacatttttagtacactctagaggattctatggcggggcc s mm7.chr2 143566192 135 - 182548267 atacatacatatatatatatatgta---tgta-----------tTCAGTCAGGACACTTCAAAAATGAAAATGTAGCAGTCACATC-------ACCCTCACTATGTGGTCAAGGCTCTACTGTTGAACAATTA---------CCGGAGAATTCTATCACAGAACC a score=11016 s hg17.chr15_random 232168 514 + 784346 agAACAAGGACCCAAATTTTCCAGCTCTTGGCTGGAGCCTCCCCATACCCTGCATGATCCCTAGACCATGGTCCCAG----CTGGATGGGTCTCCCACAACCCCCGGGGCTGCAGCTGCTCACCTGTGGCAGCAGGAGCTTGGCCCTCTCCAGTTTCCTTTTTAGCTCCTTTACGTTGAGCTGGATCTCAGACTTTTCAGATTCTACAAGTTGAAGTTTTTCTTGTAGTTTGGCATTTTTCTCCTTCAGCTCCTCATCAGTTATGCTATGGCCAGAGGCAGTAGAGAAAGGAATGAATGAAGAACATAAAAGACCACTTTGGTGATTGACCCCCTACCCTCGCCCCACaaccacagaaccgtggcgctggaagggaccccaggaattaaaagtcccaggtggcaggccagagagaagacatgagttgcctgaggctaccccatgagtcagtggcacagccagcactagagcttccgtgtgcACACATGAAAACATGTATGAG--------CCTCTCCCCACACTCA s mm7.chr2 150238574 461 - 182548267 AGGAGGAGGTTCTAAACTGTCCAGCATTTGGCTGCAGGTCACCCCCA------AGGAACCAGAGACTGTGTGCCTGGGCCTCGGGGTGAG-----------------GGCTGCACCT-CTCACCTGCTGCAGCAGCAGCTCTGACATCTCTAACTTCTTCTGCAGCTCCTCCACCCCCAACTGTGCAGCTGCTTTCTCTGCCACCAGGACTCGGAGTTTCTCTTCCAGTTCTGAGTTCTGCTGCCTCAGGTCCTCATTGCTTTTGCTGTGGTTAGAGGCAAAGCAGAAAGGAAGGAGCCAAGAACAGAAAGGAACACATTTCAGAGTGATGCATGAGCCTTGCCACACAGCCACAGGGC----------aaag------caggact---------------------cagagaga----ctgagttacctggggccacagcatgagtcaggagcattgctgggaccagagcacagctctacacagacccaaacctgtctcggctaagtctccactctCCACACTGA a score=7099 s hg17.chr15_random 232740 195 + 784346 CCACCTTCCCCCATCCTACGTGTTCCTGTACAGTTCCAGACTCAGGGCGTCCCTCTCCTTTGTTAACTCCTCAATGTACTGCAAATAGAGAAAGGTTAAGTCAGGATAGAGCAGGC-ACAGCAGTAGCTGG-ACGACCAGGAACAACTGCTACAGTGACTACTCCACAGTAACACTTCCTCACTCTCAATCACACCT s mm7.chr2 150239195 189 - 182548267 cCTCCTTCCCAC-TCTTACCTGTTCTTATACAGCTCCAGCTTGAGGGCATCCCGCTCTTTGGTTAGGTCCTTGTTATACTGCAGAAAGAGAAAGA-TGAGTCTGGACCTGGCAGGCTGAAGCAGCAGCTGGCACAAC----ACCAATGGCCACGGTCA-TATTCCAAAGTGACATTTCCTC-TTCCTAATCACATTT a score=39048 s hg17.chr15_random 233340 2089 + 784346 AAGAGATTGA-ATTTAGGGCTGGCTAACAG-GGGCCCAGAGCGATCAGATAATATTGTTATTGTTATTACTGTTATTActaccactgttggagcctttattgggtgcttcaccaggcactat-gctaacaatcccatttaatcctcaca-acctccataggagacggttaccattattacctctattgtgtagatgaaaaacatgcggtattaaaggttaagtgctg-cctaagatcacttgg--------agctggcatttcaacacccaggtatatctgattctctaagcccattcttccgctgGAGGTAGGGGCACAGTTAAGAAGGAGGAAATTAATCCTTTGTTGAATTTTTGAAAGGATGATACGTTCGCATAGTCCAAAACTCAGAAAGTCCAGAAGG----GAAATATCTCCCCCCAACACTGTGCCTCTATCCTGAGTTTTTTAATGAATCCTTACAAACGTGTTTTATGTATGTTACCATAATACGTACACACACACACATATACACCTGCCCCCTCTCTCCACACAAATAATAACATACTCAAGATACTCTTCTGTACCTTTATGGTACAAGTACCCTAACCGCCACTTAGGACTTGGCCAAGGCCACAGCCAA---GTATGGGCAGGGCGGGCACTTGGCCTCTGAGATCTATGTCCAGTGCTCGCTCCTCACAGTGCTCCCCAACTCACCCACAACAGCCGACTCAGCCCC-AGTCTGCCTCTAACAACCACACA-CAAAAGCAGCAAGAAATGGCCATGCTGCCTTCTGGGCAGGACACTCCATCCTACAGAAGGGACCTTTAGGCTCACTCCTCCATCTGCGAAGCTGGGCTCCCAAGGGACGGGGCCGTGTTTGGACTCACCCTATCCGCCTTCTTCTTCTGTGTAGCGACAGCAGAGAGAGCCTGCTCTAACTCTCCTGCAAACTTCCATGAATCATGCAGGCGGCTGATCAGATCCCTGGCCTCTCCTGGAATGAGAGACATTCAGATGTGGCCCAAAGGACTCCCCCTAAAGGCCTGTCAAAGTGCCAGGTTGAAGGATGATGGGGTGCCAGATTCCCACCTTCCAACTGCTTGACAGCATGCTGGCTGTAGTAAAGTGCCATCTGAAGCTCAGTTTTCTGACATGTAAGGATTCGTATGGTTTGAACCTGGGCCTTTGGGAGAAAAGACAAGCAAATGCTGAAAGAGAAGCAAAGAAACATTCTCCAGAGGGCAGGAGGGAACTTCACACCCTCCACTCACCTCTAGCTCCCTCCTTAGGGCTTCCTGAT--GTTGGTGGCTT----------GCCTTCTGTTCCTATAGAAAGAGGAAAACAGAGCTCTTGCTAGGGGGAGGCAGAGATGGCACAGCAAGAGACATGCCCCCAGAATGGCACCACTGCCCCAGAACAGGCCCACCCATGGGACCAGTTTATCAGGGACCCTGTGGGGATGGGGTGGAATCTTG-GGGGTGAGCCTTCTTCCCCAGGCTGGGAGTGGGTGAGATGAGCCTGGGGCCTCTACATCTGAGTGCCCCCAAA--CCCAGCGGTCATG----TCGTGAGCAAAGAA---ATCACACGACTTCTTCCAGCTGA---------GCTCGGTTCTATTGTTTCTGTGGGGAGAGTCAAAGGAAGGTGACTGAGGGTGGCCCCCTTGACTCTATTCCCCAGGCCAGGAAGCGATAGGCAGGGGCCAGGAATGGATTTAAAAGGCACAGTTCTCAGACCCA-ATGGGAACATGAACTGGTCAACTCTCCTCAA-CTCCCAAAGAAGAAGGATTTGGGTCTTTTTGGTTTTTGCCCACAGCCACAGAACTCAAAGTCTGAAACTAGATTCTCTTGAAAAGACAGTAAC---AGAAACCTTCAGAGGTGGAGTGCGAGAAAA--GCCCACCCTTCCGCCAGCTTGTGATTTAGAAAGGTGcattcactcagcaaacgttgagcacatacgggccagggacggttcttcacagcgggaatagaggtcagaaaaggcagacaggagcccttggccccgaggtttccattctagtggGCCTT-TAACTCTCGGGCTCTCAGAGCTAACAGAAACCTCTGATACTCTCTAACTCTACC-TCAGGAAACGCAAGCCCAAGAAGGAGAGT s mm7.chr2 150240911 1875 - 182548267 AAAAAATTGACATTTACAGCAGGCTAGCATTGGGCCAGGAACTCTTGGACACCACTGGTGTTGTTAAtattgtt-----------------------cactgagcactt-accaggcactgttgctaataatcccatgcaatcttcatacacatctaga----acagttgccatca---cccacactgggcaga--aacagcacac------aaagtctacgtgctggcctgaaatcacttaggtcaacagagctgagacttgaacatttcgg-gtgtctaactctctaggccctttcccctg--------GGGGCTGCAGATAAGC-GGAGGATACT--TCTCTTATTTAACTTCTATCTCAGTCTTGCTCTC-------------CTCTGAA----CAGATGGCCATTCAGTCACCCTCCCCA---------------CCCAAGTTT----ACCAATCCTCTCAGACATGATTTGCATACACTGC--------------ACACGCACAT-----------TCTTCTCCCTCCACAAATGGCACCAT-CTGAAGAT-----------CTGTTCAGAGATGAGCACCCATCCCATCACTTAGCACTTGGTCAAGGCCACAGACAAACAGCAGGGTCACAGCAGGCACCTG-CCTTTAGGTGTTGCATTCAGTGCTTGTTTAT-ACAGT----CCCCAGTTACCCA--GCAGGGTACCCATCCCCCAGGTTGCTTTTACCAACCACACAACAAAAGCAGCAAGAATTGGC-GTGGTGTATGCTGTG--AGACACCCGGCCATGCAGCAAAGCCCTTCAGGCTCACTG-TCCACCAG-GAAGCTG-----CTGATGGCCAGAGAATCGACCTGTCTTACCCTGTCTGCCTGTTTCTGTTGCGTTGACACGGTAGACAGTGTCCGCTCCAGCTCTCCCACACGCTGTCGGGAGGACTGTAGTCGGCTGGCAAGATCCTCCGACTCTCCTGGAACAAGAGAGGTCCAGATGGAGCC-------CTC-------GGGCCCGCCGCAGCATCAG--TACAGGCGGAAGGGTTCCCAGG-CCTTACCTGCTTTCTGCCTGGCTGCTTGCTGAGTGTGGGCCAGGGCCGTCTGTAATTCTGCCTTCTCAGACACCAGGATGCCTATGGTCTGAATGTGAACCTTTGGAGAAAAGGCCA--CCAATGCTGAGAGA-AGGGAGAGCAACACTCTCCAGAGAACTCGGGGACACTGCCCAGA--CCTCTCACCTGCAGCTGTTCCCTGAGAGAGCCCTGCTCCTTTGCCAGCTTCTGCTGATAATCCTTCTTCTCCTGCAGGCACAAGGAAGTACAGCTCTTAGT--GGGGAAGCAGGGGTGGCC---CAAGGGACGAGCCCCCAGAAAGACA--AAGACACCAGGACAGGCACA-CCATGAGGTCAGGTTATCAAAGATCCTATGGAG-------GACACCCTGTGGGGTGAG---TCTTCTCCAGGATAGAAGAAAGCAAGA-----CCGAAGCCTGCACCTCTGAGGTCTCCCCAACCCCCATCAGTCATGAAAAGAGCGAACATAGAATCTATCACATTACTTTCTCCAGTTGATCCAGAGTGTCTTGGTTCTGTTGTTTCTGTGGGAAGAGTCAAAGGAAGCGGACTAGGCCTGGCCCCTTT--CATGACACCCCAGACC---GAACGGGAGG------------ATGGATTTGAGA---AAGGTGCTCAGAGCCACATGGGTCCATGAGCTAACCAA--TTCCTCAAGCTCCCAGGGTA-------TTTATTCTCCCTGCCTCTCACTCACAAC--------------TGTGCAACTGGGTTCACAGTAAAGGAGAGTAACTCTAGAAAC-----------AAGTGTGAGAAAGATGACTACCC-TCTGCCAACTTGGGACTTGGCAGAGTGTGTCGAATTA--AAAC--TGAGCGTG-----------------TCTT----GTGGGCACA---ACCAAGAGATGAATGGGAGAGCACTTGTTTCTGATGAGTC------AATGAGCTTTCCAACTCTTGCCTCTTCAGAGTAGACAGAGGTCTCTGACCCACTCCAAATCTGCTAACAGGAAACTCAAACCCAGGGAGTGGTGT a score=12318 s hg17.chr15_random 235429 475 + 784346 TTACAGCAGGTCCTGGACGAGGG--ATTAACATAAAAACA-CAATGACAAatctcatttaaacttcacaaatgtaaggaaaacaataccactcgtattttacggatgtgaaaagagaggcccaaagagctcaagcaatttgcgctaaa----tcatatccctagcagatggaggggtaggattcaaac------------------------------------------------------------------------------------------------ccagAATTCTTAGCCAGTACCTGGCAGTTCTTCCACAATCTTAACAATTACCCTCCAC----CACCCCTTGGGCCCTCTGTCCCCAGGAGCCCGGCCAGCCAAGACTCACATCCTCAGGCGAGTGGCAACCACCAGAAGTGGTTGTCTCAGGGTTAGTGCCATTATTTATTTTCTTCTTTTTGGTGTCGCTTGCTGCTGTACCAACACTAGGGTTGGTCTGGGGATGATGGTCTGTCAACTGTGGAAAGGAAGAGCAGTGATACTCATGAGAACTACAAGCTCCTACAGTCACATCCT s mm7.chr2 150248355 564 - 182548267 CCACAGCAGACCCTCCACTAGGGGAATTAATAGAAAAACAACCGCAATAAacttcacttaatctttatagatacacattaaa-aatattaccgctattgtacagctatgtaaaaagaggctcagagagtttaaccaacttgccctaaagttatcatattgccaactgatggagagatagaattcagactcagatttAATTTTTCCTGTGCTGAGATAAAACCCAGGGCCATTGTGAGATGAGCCCTAGTTCATTACCATTGAACTAGGCAACAAGCCCTCAAAGCCAGACTTTTTAACCAGCACCTGACATTTCC------ACTTGAACCACAGCCCTCCCCGCTTCTTCCCACCTGCCCCCATTCCACAGGA-CTCTGTTGGCCAAGACTCACATTCTCTGGTGACTGACAGTCACTGGCAGTGGGTCTCTCTGGGCTATGGCCATTTTTAATCTTTTTCTTCTT------CTTTGCTCCTGCAGGAACACCCGGGCTGTTCTTCTGCTGATACTCTCTCAGCTGTGGAAAGG-AGAACAGAGAGA--AATGAGAGCCATCTGC-CTCACACTCACAGCCT a score=2244 s hg17.chr15_random 235921 99 + 784346 AAATACTCTTATAGAC---CATCTGATTTAATGCCACCA--ACTGTAGGAAATGTTGTCACAATCACTTAGTGACTGAGAGAGATTGATACCATGGCTGAAAAA s mm7.chr2 150249371 99 - 182548267 AAATACTCTTATGTACGTAAGTCTCATGTAATGGTACCACGAGTCTACAAGATATAATAATGACCTCTTAATGGCAGAAGAA-----ATGGCATGGCTAAAAAG a score=4321 s hg17.chr15_random 236020 130 + 784346 AAAGGCAGTAATGGAACTTAAACTC-AGTCTTCTGACTCTGAGCTCTGGGATTTTGCCCTAAATCAGCAGCTGCCAGGGACCAAAA-CCAGAGGCAGAGGTAGAAAAGCAAATATTAAGTAGGCAGGAACTG s mm7.chr2 150249576 120 - 182548267 AGAGGCAAACACGGAATCTAAACTCAAATCTTCTGATGCCCTGCTCTGGGGTTT------------GCAGCTCCCAAAGGGAAAAATCTAAAGGTAGAGACCAGAGAGTAAACATTTAGTTGGCAGGAATTG a score=12846 s hg17.chr15_random 236199 959 + 784346 AAAAGTACACC--AGTACCTCTCAAACCTTTACATCAATGTCTCCTCATGGCAGAAGG---------------CAGCCTTTCTGCTAAATCTGGGAATTTAACAGAAAGAGGACAACCCAAGCCTCATTTCAGAGAGAAGTCTTGTATACGCTTATAAATCTATGTGACTTTCATCCCTAAGTACATTAATG--TTTTGTCTCTCAATAGAATCAAGGGAAACTGATGCTTCA-GAAAGATGCCCCATATTTATCCTGTGGCACTCAAAGTACCCCAGGTTGAGATGAGAT---GAGGAAGACTCAAGCTAAGTTCAGTTTCCCAAGAT-CTGTTCCACAGAAGATAAGCAGATCTCACTCCAGAACCAGTGACTGAGGGGCACTCTGGTCCCAGAACAATGGAGAATTCAAATCTGAGGTGCAGAACTGAGAAAAAATGTTAAAATCTCTCTGGAGAGTAGAAGCCTGGGAGAAAACCAAACCAAACCCGTTCTCCCATTGCCACCCAGAGACACTGTCAACGTGTTGAGCTCCTGGGGGAGGTGTAGGCTTTTCACACTGTCAAGGTCTGTGGTAAGGAAGTCAGGCAGCCTGAAACCTCTCTCTTCTAGGTCCCACAGTCCCCATTCCCCTTCCAGCTGGAAACCTGTGCTGCAACCAGAGGAAACAG--AAGTGGGCAAGAACACTTAGGGGACTGGGTCCTAAGACCAA---AGGCCGGTCTTGTGGTAGTAATGACAGTTT-GTAGCGGGACTGTGACATCACTACATTCTACTCCTCGGTGGAGTGGTTGGGGGGGACACATGAGTGCAATGCCCAAGTTGCCGCTTTGAGACTGGGGAGGGGGTCACAAAATTGGGAGCCAGGTCCTTGGAGACGTGACCCCAAAGAGCCCCGGGAGGTCAGGCTTGGGGCGGCAGGAGGTGAGGGCCAATTAAGGAGCAAGGAGCTCCAGGAGTCACATCCCCAAAGTCACCCTGTGGCA s mm7.chr2 150251595 756 - 182548267 AAAGGTACACCGCAGTACTTCCTAAACCTGCTTCCTAAGTTTACAACATGACAGAAGGGCAGAAACCGTGAAGCCACGGCTTTAGTGAACATGGGAA-----CAGAAAGGGCACAGCCCTTG--TCATCGCAGAGAGAAGTCTC---------TACAAATCTATGAAAATGCCAAACC---AGACTTTTATGGTTTTTTTCTCTCAAAAGAAGCATGGGAAAGTGATGTTTCCCGTGAGATGCCTCACCCGCATCCCGTGCTTCTCAC--CACCCCAGTTGGAAAAGACATTCTGGCTGAATTTTAAGTTAAGTTCAGTTCCCCAAGACACTGATCAACA--------------------CTATAAC-----------ATGCGTTTTGCTCC-----------------------------------------AGAGAGATTACAGTCTCTCTAGAGAGCAGACAACC-----AAATCCAAACCAAACCAATCCA-----TGTCAGCAAGGGGTGCTGACA--GTGTTGTGCTC----------------------ACACT----AATGCTAAGTTAAGGGAATGCGGGCGCCTACAGCGTCTCCGCACTAGATTCCACA--CTTGGGCTCCCTTCCAGGTGGAAATGGGTTCT-CCACCAGAG-AAACGGGAAAAGGGGCAACAACA-TTAGGTGAGCAGGT----GGAGCAATCCAAACCAGACTCGGAGTAGTAATGACAGTTTCGAGGGGGGACTGTGACGTAACTACATTCCACTCC-------------------------ATACTACCAACGCCCGAGTCGCC----------------------TACAGGGCCAGGACCGAGGACCTTGGAGAC---------AGGTGCCCTGGGAGGTCTGGATTGGAGCGTCCGGAGCCGGGGGCTAA---------------------GAG----------------ACCCTGTGTCA a score=14332 s hg17.chr15_random 237284 622 + 784346 CTGCTCAAAGTCACCCTGGTGTGCCGGGCAGAGCAGGGGCAGGACTTATGAGGGGGTTGGGCTGGCTGACAAGATTTTGGTGTGGGGAGCCCAGAGGCACTGGGGTGGGGGGCCCAGCCTGGTGTCCCTCAGGAGTGGCACAGACTCTGG-CAGCAGTTCGGCTGTCAGAGGGGGCCTCGGGTTGGGTTGGGGTGTTG-------GTGCG-TTTACCTGTTCCTTGGCCTCGGCCAATTTGCTCTGTCTGGTTTCTTTGGACATCATAGGATGGGTAGggaggtggggatgggtagggaggtggggatgggtagggaggtggggatgggtagggaggtggggttggggCCACATCAGCATGATCCAGGTGAGGA-CAAGTATATACCTCCAGTCACCTCTACGTCGCTGTGTGACTGAGCCAGAGGAGGCGTAACCAGGGCTGCACTAGAATG--CAGAATAGGGGTGTGGCCTTCATGCTTGAAGCCCATTGGTCAATGAGAAAGATGAAAGGAAAAGGAGGTGTGGCCAGACAGCAGCGTGTCATCAAGGACCTGTGTTGTC-ACAAGGAAAGCTGCCTATGCAACCGCTGTCCCCGCCCA-----CTCCAGGAG--AGGGGCGGGGCTGGCTTTCACTT s mm7.chr2 150252351 574 - 182548267 CTGACCAAAGTCACCTAGGGGCGACTGAGAGGGCGGGGGCTGGGTTGCTGAGGGGGCGGGGCTGGCTGAGAAGACTTCACTG-GGGGAGCCCAG-GGCGCTGAGG---GGTTCTTCTACCCGTGTGTCTCGGGAAAGACTCGGACTCTGGTCATGGGTCCTGCCGTTGGAGGAG--CTCGGGTGGGGTCAAGGGGCCGCGACCCGGAGCGCTTTACCTTTTTCTTGGCCGCAGCCAATTTGCTCTGCCTGGTTTCTTCCGACATCCCGGGGCGGGGAGGG---------------GGGAAGCGGG---------------------------------------GGGGCCACATCACCACGATCCCGGCAGCCACCGCGAAACTGCTTCCGGAAGCTACGGCTTCTCTACA----AGGGCCAGAGAAGGCGGGTGCAGAGCGCCCCTTGGACGCTCGGAAACCCAGCGTGACCTACCTTCTCCAAGCCCATTGGCTGATGAGAACGATGAAC-GACAGGGAGGCGTGGCCACGCGGTCGCGAGGCCTGAGCGACGGGTGGAGTTAACGACGAGAGCTGCGCGCGCAGCCA-TGACCCCTCACAGCGGCCTATGGGAAGCAGGGGCGGAACC-GCTTTAACTT a score=6482 s hg17.chr15_random 241386 143 + 784346 ATTATTTCTAACATTTGAGGGACATTTCAATTAAGTGAAATTTA----ATTCTTACTGACCTGATCTCTTATCCTCTGTTTAATGATACCTTCCAGTTGAAAGGT-GTTTCCTCTGTAATCACGGGTGCCAAAGGAAATACAACATGT s mm7.chr7 60136841 140 + 141766352 ATCGTTTCTAAAAATTGCAGTGAA--------AACTAAAATTCACTCTGTTCTTACTGACCTGATCTCGTATCCTCTGTTTAATGATATCTTCTAGATGGAGGGTGGTCTCCTCTGTGATTACAGGGGCTAAAAGAAGCATATCATGT a score=15880 s hg17.chr15_random 242106 433 + 784346 ttactttgaaatgattcagagggaaaaagggcacatatacaatcttcca--tacgcagaagacagaaaacaagtgtgacaaaacatta---actagtgaatccagttgaatagcatacagatgttcactgtatgattttatcaacttttctgtgtttgcaagttttcaaaataaaaGTTGAGGGAAAGAAAC----ATCACCCCAAATCTTTCTATGAAATGGGACCATAGAAAAAGCAGAGAAGTGAACACTTTGCAGAAA------AGAGCACTGCACCCATCCGGACAGCATGGTCAAAGTGCAGGCTCTCCTCCAGGAGGCTCTTCTCTGGTCTCTTCTGTGCTGTCACTTCCCCCACATGCAGCCAAGGCTTTTT-TCTAACAACTCTTTTTCTAAAGATGTAATTTTTGTCATTCATCTAAGAAAGAGAAGAAAAGAATTAGT s mm7.chr7 60138013 423 + 141766352 TTACTTTTTAATGATGAAGAG------------CACATACAATCACAAAGATGCACAGGAGACCAAAGGCCAAGATTTCAACCTGTTACCAACTGCTGAATTCAGTTAAATGGCA--CAGGTATTCACCGCACTATTTTTTCAACTCGT--ATGTTAGCAAGTTTTTAAAACAA--GCAGAGGAAAAAAAACGATCAGCACTCAAAATCTTTCTG---AAAGGAACTACAGAAAA-GCACAAAAGTAGACATGCTGTAGAAGCTCAGCAGA-CACCATACCCATCCTGACTGCATGGTCAAAGTGGAGGGTCTCTTCCAGCAGGCTGTTCTCTGGCCGCTTCTGCGCTGTCACTTCCCCTTGAAGCTGCCAAGGCTTTTTATCCAATAACTCTTTTTCCAAAGATGCGATTTTC-TCATTCATCTAGGAC--ACGAGCCAGGAGTTAGT a score=38857 s hg17.chr15_random 243171 1418 + 784346 ATTTGCTTGAGTTTTTAGCTCTCTCACCCATTTCAGGATTGTCACCACCCATATCTGACACGTCCTCCTCCTCCTCTAAATCT---TCTAGGTCCTCCTGGCCATCAGCCTCTGTTTCTGAACCAGCCTCTTCATGCTCCTGTTCTTCACTCTCTGGGAGAAGACTGATATCTTCATCTT----TCTTTCACTAACCGCATTCTGGAAGCACGGTAAAATTGCTTCATTTTGCAATTCCAGTTGTTGCAAAGTCTGCTCATCATCAAAACTTTCTATCACAAGTTTTTGTAAAGAGCTGCCATGGATTCTACCATTCTCTACTGTTTTATTAAAGTCATAAAGCACTTTTGTTAAAGAAGTGAACTTTGGTTCCAATCCATCTTGAAACCTATTGGGAGG--AATTAAATGAGATTTAGAATTATAGATAATAATTTCACAGCCCTCTTAATTAAAAGAAAAATAAAAACCTCAACTCTTCTGTAAAATCAAATTTGAATAAAG-------TGTAAGTATAGATTCTGG-CCCCAACAATATATAAGCTGATGAGCCACAATGATATATAAAACCTGTCAACCAAGTATTTGTGAATCAGCTGTATAGATTGTTGGCAGGAAAAGCATTACAAATCTATTTGCTTGGAGATATATAGTGAATTAGCCTTAAATTATCTACTCTGCTACATTATATACCACTCCATTCATTCATTCCCTTATTCACTCAATGATCAACATTT-GCtttggctacagtggtcaaggaaaacctctcctagatgtgacatctgaga------tgaaacttacagacaagtatag----tcttataaagattgggaaacatgtattccaggcggaagaaacagcaagaacaaattctctaagatgcaattgagcttggtaagcctgaggaataaaaaagtgagcatggctatagcgtga---aggaggcagaagg------tgaagttggagagactgatgggag--------------ccaaattctgcagggctcaagggtaagagtttgccgttttaagtgtaataagaaaatgtgagaagattttaagcagaaggatgaaatgatgatttatacgaaggaagaagaaagggaggaaggaggaggaggaaagtagagtgattagaaggttgatgcagcattccaggcaaaagatgatggtgatttaagctggagttagagcagtgaatatgctgagtaca-------gtttggaggtagaactgacaggattgctaaggaattagat---acagaatagagaaaagtgaagtcatcaaaatagcagcctagttttatgtgcgagcaactggagagacagaactgccatttactgtgataggcaaggcttgagtggtggagcaaggggaaaggacttcagCGGATGGCAGAGTGTAGGTGGGTAGAAACAACATTCTACTGTATTTTGGACACAGTGAATTTGTGATGCTG s mm7.chr7 60142337 1333 + 141766352 ATTTCCTGGAGCTTTTGGCTCTGTCCCTCCCTTTAGGAACATCACCACCCTCGTCTGACAGTTGTTCTTCATCC---AAGTCTGTCTCTAGGTTCTCCTGGTTGTCAGCCTCCACCTCTGAGGCATCCTCTTCGCACTCCTCATCTTCACATTCTGGGAGAAGGCTGATATCTTCATCCTCAACTGTCTCACTAACTGCATTCTGGAAGTATTGTAAGACAGGTTCATTTTGCAATTCGAGTTGTTGCCAAATCTGCTCATCATCAAAACTGTTTATCTCAAGTTTCTGTAAAGGACTTCCAGAGATTCGGCCATTCTCTAATACTTTATTAAAATCATATAGAACTTTTGTTAAAGATGTGAAGTTTGATGCTAGTCCATTCTGAATTCTATTGGAAAGAAAATTAAGTGAGAAT--GAATTATACACAATAGCATCA-AGCATTTTTAAATAAAAGAAAAAGACATATCGTA-----TTTGCAAATTAAAATGTAAATGAAGCATCAATTTTAAGTACAGACTCTAGTTCCCAACAGTAC-CCTGCTGATGAGCCAGACCG-----TAAAAACTAAAAACC---------TGACTTTGCTGTATATACTG----------AAGC-TTACGCATCTACTTGCCTGGAGATACCCAGGAAGTCAGCCTTAAATCCTCAAATCTG---CATCATACA-TACTCC--TCACCTATT-AGTCGTTTGGCAAGTGATTCCCACCTGGCTTTAA-------GCTTGAGAAAAATTATCTAAGGATATGATATCTGAAATGGGATTGAGACCTACAGGTAAA-ATAGAGTATCCTGTACAGATGTGGAAACACATAACTCTGG------------------------TTTTCAGAC----------------AATGTGAAGAACAGAAAGACCAAGACAGCTGTAGTGTGACTGAGGAGGCAGAGTGTACGGCTGAGGTTATAGAAGCTGGGGGGGGGGGGGTGGCAAGACAGAAACCACGCAGAGTTCTAAGACAGGAA-----CACTTTAAGCGTAATGAGAAC-------AGAGTTGCAGGCTGAAGTTTGAAATGATAATTTACAATGTGGAAACAAAAAGCACGATAG------------AGTTGAGTTGTTAGAAAGCTGATGAAGCATC----GCAAAGGATT-------TTTATGTTGGAG---ACGCAGTCAGTATGACAACTAGGAATCAGTGTCTAAATATAGCGTAGGCAGGATGCTAAAGGGGATAGAGAAAATAGGACAGAGAAAAATGAAAGCATCAAGGAAGCAGACTAGCTGAATCT--AAATAAATGAAATGATAGAACTGCCTTTTCGTGGGGCCGTAAA------CGTAATGGAA-ACAGGGAAATGACTTCAGGGGAGAGAAGAGTACAGGAGGGGGTAAGGA-------GCTCTATTTTGGACACAATGAGTCTGTGATACTG a score=1122 s hg17.chr15_random 244725 84 + 784346 ataaat--gagtcataattttataggtcatatttgaagTTCTTCAACAAAATACACATAAAACGTTTGTGTTGGGAAGAGACATGA s mm7.chr7 60143860 56 + 141766352 ATAAGTCAGAGTCATAATTTTACAGAACTTAATCAAA------------------------------GTGCTGGGAAGAAAGAAGt a score=7888 s hg17.chr15_random 244842 531 + 784346 ACAGACAAGTGACAAGTTTGTGCTTTCAATAAAGTATGATGGCAGGTAAACACTGAGTGCTTTAGGAGCACAGGCGGAAGGAGAAACCAACACAGTTGTGTGTAGGGGGATGGGGGCCGTAATAAGCCTCAAGGGGAGCTTATAGGCGTGAATAACTGAGGTTAGGTTGATTTCAATAACATTCAACTGAGAGATCCATACTGTAAAAGTTTTAACAATTTTTAAAATTTTGATAGCCT----------AGGTCCTCTGAAATGTGGGGAAAAGTGATTTACATTTCCCCTTACCTTCCCCCAGCTCCACAATTTGCCAGGGGTCTGCAACCCGTGTCCACGTGCGAC---CGCAGTCGCACCCGAGCCCGGGATCTGTGCACTTACGTGAGGATGCACTCGGGCCAGCCAGTGGCTTTGCCCACCTCCCTCAGACACCGCTCCGGGGTCCGTCAGCGCCAGGCCCATGG-GCCATGGCTGT---CTGCAACTCCCGACACAAGCTGCAAGGCAAGAGAGCCGCTGGGAAACCGCACCGCAAGGATGC s mm7.chr7 60144388 469 + 141766352 ATTGACAAGCAACAAGTACGTACTTTCAG------------------------TGTGTATTTTGGGGACAAATTCAGAAAGCATATTCCGC-------------------------CCTCAATGAGCCTC----------TCTGGACGCGAATAACTGGGCTTAG------TGCAATAGCCCACAACTAGGAAATCTGCACCGAGCCGCTTTT----ACTTTTAGCATTTTGACAGGCCAACGGAGCAAAAACTGTCTGAAGT-TGGGGCTAAGCGACCTGTACTTTCCCTTCCTGGCTTTCAG------AAGTTGCCATATGCTGGCCCGCCCAGCACCGGTGAGATGCGCGCTGCTCTCTCCCAGACCTGGATCTGT--ACTTACGTGAGGAAACACTCCGGTCGGTTGGTGGCTTTCCTGATTTCCCTCAGACACCGTTCCAGAGTCTGTCGACGAAACACGCGAGGCGCCATAGCTACACACTACGGCACCACGCGAGTGCTGCGA-GCCGGCCGGCCGGCCGGAAGCAGTACGCCAAACACAC a score=18279 s hg17.chr15_random 258045 670 + 784346 GCGGCCTCTCCCCT----CTCTTAGGG---TGGGTGGGGACAGTGGTTGCCTGGGCAGCTTTCCTTGTGAGC--CAAAGGTCCCTCTGGACACATGAT-GCCTGGCCACGCCCCCTTTCCCTTTCATCTTTCTCATTAACCAATGGGCTTGGAGCATTAAGGCCACGCCCCTATTCTG--CCTTCTACTGCATCCCTGGTTACGCCTCCTCTGGCTCAGTCGCACAGCTACCTGGTAGGTGACTGGAGGTGTTGATCAGTGCTTGGTGGGATTTTGCTGATGTGGCCCCAAGCCCGCCTCCCTCCCCACCCTGCGATGGCAGAAGAAACTCGACAAAGTAAATTGGCAGCAGCCAAGAGAAAGGTAAAAACACACCAGGTCACGGACCCCCAACCCAGCCATAGATCCTCTCCAACGACAAGACTGCTG-CCAGAGTCCATACCACTCCCGAGGTTCACCGGACTGGGACCCCCACACCGGTGCCTCTGGGCTACCCCCACCAAAGTTTTGTCAGTCAGCCCCACCCCTTCAGCAAGCAGCCCAGTCTCTGCCCTCACCAATCACCCCAGGGTGACTTTGGGCAGGTGAATCCTGGGGCTCCCCGCTCCTTTACTGGGCCCCCATCTCCTGCCACCCCAAGCTTGACCTCCCAGGGCTTTTTGGGCTCACATCTCCAAGGACC s mm7.chr2 32295350 626 + 182548267 GCGGTTCCGCCCCTGCTTCCCATAGGCCGCTGTGAGGGGTCA-TGGCTGCGCGCGCAGCTCTCGTCGTTAACTCCACCCGTCGCTCAGGCCTCGCGACCGCGTGGCCACGCCTCCCTGTC-GTTCATCGTTCTCATCAGCCAATGGGCTTGGAGAAGGTAGGTCACGCTGGGTTTCCGAGCGTCCAAGGGGCGCTCTGCACCCGCCTTCTCTGGCCC--TTGTAGAGAAGCC--GTAGCTTCCGGAAGCAGTTTCGCGGTGGCTGCCGGGATCGTGGTGATGTGGCCCCCCCGCTTCCCCCCTCCCCGCCCCGGGATGTCGGAAGAAACCAGGCAGAGCAAATTGGCTGCGGCCAAGAAAAAGGT-AAAGCGCTCCGGGTCGCGGCCCCTTGACCCCACCCGAGCTC--CTCCAACGGCAGGACCCATGACCAGAGTCCGAGTCTTTCCCGAGACACACGGGTAGAAGAACCCCTCAGCG----CCCTGGGCT-CCCCCAGTGAAGTCTTCTCAGCCAGCCCCGCCCCCTCAGCAA----CCCAGCCCCCGCCCTC-TCAGTCGCCCCTAGGTGACTTTGGTCAG--TGACACAGGGTCT-------------CTTAGCCCCCGGCTCCGGACGCTCCAATCCAGACCTCCCAGGGC-----------------------ACC a score=8222 s hg17.chr15_random 258856 436 + 784346 TGTCTCCAAGGACCTGGGTCCCAGCTCTGTTTTTCCCTCCCCTATCATGGAGCGGTGACTCGGACATCATGCTGATGTGGTCCCTCCCCCTCACCAGGAAGAGTGGAATGTAGTGATGTCACGGTCCATCC-AGTAACTGTCATTACTG---CAAGACTGGCCTTTGATCTTATGACCCAGTCCCCTAAGCATTGCCACCCCATTTCTGGTTCCTCTTGTCACAGCACAAATTTCCAGCTGGAAGGGGAATGGAGATTGGGACCTAGGAGCAAGAGGTTTCAGGCTGCCTCACTCCCTTAACATAAACATTGACAGCGGGAAAAGCCTACACTTCCCCTGTGAGCTCAAAACATTGACAGTACCTCTGGATGGCAACTGGAGAATGGGTTTGACTTGGTTTGGTTTTCTCCCAGGCTTCTACTTTCCAGAGAGATTTTAA s mm7.chr2 32295976 349 + 182548267 TGTCTCCAAGGTCCTCGGTCCTGGCCCTGT----------------------AGGCGACTCGGGCGT--TGGTAGTATG---------------------GAGTGGAATGTAGTTACGTCACAGTCCCCCCTCGAAACTGTCATTACTACTCCGAGTCTGG-TTTGGATTGCTCCACCTGCTCACCTAA-TGTTGTTGCCCCTTTTCCCGTTTCTCTGGT-GGAGAACCCATTTCCACCTGGAAGGGAGCCCAAGTGTGGAATCTAGTGCGGAGACGCTGTAGGCGCCCGCATTCCCTTAAC-TTAGCATTAG-------------------------TGTGAG--CACAACACTGTCAGCACCCCTTGCTGACA--TGGA--------TTGGTTTGGTTTGGATTT-----GGTTGTCTGCTCTCTAGAGAGACTGTAA a score=944 s hg17.chr15_random 259293 113 + 784346 AAATTTTTTGTGAGTTCTCCACCTCACATTCTAATTCTCCATGGTTCTGGGACCAGACTGCCCTTCAGCCAGTGGTCTGTGAAGTGAGATTTGCTCATCTTCTGTGGAATAGA s mm7.chr2 38980277 109 + 182548267 AGTCTTTTTCAGAATCTTGAACTTTGCACTTGTACTCCCTACTACTTGGGAAGCAGAGTGTCCC-AAGTCAG-GCTCCCTGGGATGAA--CTGCATCTATAATGTGGGGTAGT a score=5847 s hg17.chr15_random 259406 314 + 784346 TCTTGGGAAACTGAACTTGACAGCTTGAATCTTCCTC---ATATTATGTAAACCTGGGGTACTTTGAGTGCCACAGGATACATATGGGACATCTTTC-TGAAGCATCAGTTTCCATTGATTCTCTTGAGATCAAGAGAAAAAACATTAATGTACTTAGGGATGACAGTCACATAGGTTTCTAAGAGTATACCAGACTTCTCTCTGAAATGAGGCTTGGGTTGTCCTCTTTCTGATAAATTCCCAGATTTAACAGAAAGGCTG---------------CCTTCTGCCATGAGGACACATTGATATAAGAGTTTGAGAGGTACT--GGTGCACTTCT s mm7.chr2 32296365 307 + 182548267 TCTTGGGGAACTGAACTT---AACTTAAAATTCAGCCAGAATGTCTTTTCCAACTGGGGTG--GTGAGAAGCACGGGATGCGGGTGAGGCATCTCACGGGAAACATCACTTTCCCATGCTTCTTTTGAG----AGAAAAAAACCATAAAAGTCT---GGTTTGGCATTTTCATAGATTTGTAG---------AGACTTCTCTCTGCGATGA--CAAGGGCTGTGCCCTTTCTG-----TTCCCATGTTCACTAAAGCCGTGGCTTCACGGTTTCTGCCCTTCTGTCATGTTGTAAACTTAGGAAGCAGGTTTAGGAAGTACTGCGGTGTACCTTT a score=4110 s hg17.chr15_random 259767 134 + 784346 CAGTTCCTGCCTACTTAATGTTTACTTTTCTACCTCTGCCTCTGG-TTTTGGTCCCTGGCAGCTGCTGATTCTTGGTAAAACCCCAGAGTTTGGAGTCAGAAGACTGAGTTTCAAAGTTCGTCTGTCGCCTTTTT s mm7.chr2 32298571 122 + 182548267 CAATTCCTGCCAACTAAATGTTTACTCTCTGGTCTCTACCTTTAGATTTTTCCCTTTGGGAGCTGC------------AAACCCCAGAGCAGGGCATCAGAAGATTTGAGTTTAGATTCCGTGT-TTGCCTCTGT a score=2472 s hg17.chr15_random 259906 112 + 784346 CTTCTTTTTTTTTCTAGCCATGATATCAATCTCTTTGAGTCACTAAATGATTGTGACAACACCTTGTACAGTTGTTGGTATCATTAAATCAGATG---GTGTATAAGAGTATTTT s mm7.chr2 32298788 109 + 182548267 AATTACTACCTTTTTAGCCATGCCAT-----TTCTTCTGCCATTAAGAGGTCATTATTATATCTTGTAGACTCGT-GGTACCATTACATGAGACTTACGTACATAAGAGTATTTT a score=13540 s hg17.chr15_random 260033 552 + 784346 GAGGATGTGGCTGCAGGGGCTGATAGTTCTCATGAGTATTACTGCTCTTGTTTCTGACAGTTAAAAGAATATTGGCAGAGAAACAGCCCTGGTGTTCCAGCAGGAGCCAAGAGGAACAGGAAAAC---AAATGGCAGCATCCATGAGACAGCCACTTCTGGTGGTTGCCACTCACCTGGAGATGTGAGTCTTGGCTGACTAGGTTCCTGGGGACAGGGGAC-----------------------------CCAAGGGGcactagagggtaattgttaaga---------ttgtgg-----------------------atggactg--------------------ttgggt---------acctgtgaagaat----tctgggtttgaatcctgcctctttgtctgctagggatatga----attagggcaagttgctagacctcatcgggcctctcttttcacatctgtataatagaggtggtattgtttcacttccatttgtgaagtttaaatgagatTTGTTATTGTTGTTTTTATGTTAAT--CCCTAGTACATGGCCTGCTGTAAACACCCAGAACACCCAGGATATGGTCATTGCTGTTCGATTTTCCTCATCCCCAGTCTCAAGGGGAAGCCAGGACAATGAGAACA s mm7.chr2 32299347 635 + 182548267 GAGGCTGTGAGTGT-GAGGCAGATGGCTCTCATT--TCTCTCTGTTCTCCTTTCC-ACAGCTGAGAGAGTATCAGCAGAAGAACAGCCCGGGTGTTCCTGCAGGAGCAAAGAAGAAGAAAAAGATTAAAAATGGCCATAGCCCAGAGAGACCCACTGCCAGTGACTGTCAGTCACCAGAGAATGTGAGTCTTGGCCAAC-AGAGTCCTGTGGAATGGGGGCAGGTGGGAAGAAGCGGGGAGGGCTGTGGTTCAAGTGGAAATGTCAGGTGCTGGTTAAAAAGTCTGGCTTTGAGGGCTTGTTGCCTAGTTCAATGGTAATGAACTAGGGCTCATCTCACAATGGCCCTGGGTTTTATCTCAGCACAGGAAAAATTaaatctgagtctgaattctatctctccatcagttggcaatatgataactttagggcaagttggttaaactctctgagcctctttttacatagctgtacaatagcggtaatatt-tttaatgtgtatctataaagattaagtgaagtTTATTGCGGTTGTTTTTCTATTAATTCCCCTAGTGGAGGGTCTGCTGTGGA-------GTTAACAGTGAGCTAATAGGTACCGCTTGATTTTCTT-------GGTTTGGGGTAGAAATCAGACCAGAGGGAACA a score=33241 s hg17.chr15_random 260630 900 + 784346 TGGGGAGATAAGAACCATGAGAGAAGTTGGCACAAAGGAGTTATGGGACAAAGGGTCCAAGATAGGCAGAAAAGAAAATTGTGCCAGTTGATGGGGAAGAAAAGAAGTCAGAGGGCTTAGATACTGAGTGGGACAGAACATCTTCATGTGCACTCTCATCTCTTGTAGTCAGCAACAGGTATCCACGGGGAGAGCCCTACATCATCTGCTACCCTGAAGGATCTGGAGGTAAGAGGCTCTGGGCAGAGGTGCAGTGACCCTGCAGGCCAGCCCTCCAACCTCCTCCTCCAGGTGGGACGGGGTGCCCCTCTGCCAGCTGAGACAGTCCACACACACCCCAGCCCTAATGATTGCTCTCTCTACCTCTCCCCCCACTCCTCCTCCACCTCCTCCTCTCTGCATGCGCCTCAGAGCCCGTGCCAAGAACTAGCAGTAGTCCCAGACTCGAGGTCCGTAAAAGTCAGTCAACTGAAGAACACCATCAAATCTTTGGTAAGAGTCCACTGGGGTCCCCTGATTCCACGCTGCCAATCCTGGGCTCTAGTTTCCCCTTGGGGCCCTGAAGAAAGGGGAC-GGCGGCCCCTGGTGCCAAGGGCGAATAGGGAGCTGGGGCGCCCAGGCCTCACCTGGAGGGACCCCG------GAGCATGCAGCATGGCTCTTTTTTTGCTGCCCTGTTTGCTGACTCTCCCCTCTCCAGACGCCCCTGCTCGAGTCCTTGCTACACACGCCCTGGGATTGTTGCCTCTTG----GGGAAGTGCTAGCCTgactggttgtcaggggccccgtatttctgccatgactcagtccctaatttgctctttgattctggacaagccacctctcctttttgggctcatgtttcc----agaggaagtagtgagtatcaaaggtctctgttagctct s mm7.chr2 32304682 867 + 182548267 TGGCGGGAAAAGAGCCATAAGGAG---TGGCACAAAGGGGGTGTGAG---------------TGAGCAGGAAAGGAGATTCTGCTAGTTGAGGGGGAAGTAG-GAGGCTGCAGGGATTAGACATTGAGGGTCACAGAGCATCTCCATGTGAGGTATTGTCTCTCCTAGTCTACATCCTACATCAACGGGGAGGGCCTCACATC---TTCCAACATGAAGGAACTGGAGGTGAGTGGCCTGGACTCATGGCCCAGCAACCCTTTACGCCAACA-GCCTATCTCCTCCTACAGG--GACCTGGGTGCCC-GCTGCCAGCTGAGACAGCCCAC-CAC-CCCCACCCCTAATGAT-GCTCTCTCTACCTTTCCCCCCATCCCTCCTCCAACTCCTCCTCTCTGCATGCGCCTCAGAACCGGTACCAAGAGCTAGCAGTAGCCCTGGACTCCAGCTATGTAACAAACAAACAACTCAGTAGCACGATAGAGGAATTGGTAAGAGTCCAGTGGGGT-CCCTGATTCT-TGCTGCCAGTCCTGGGCTTCAGTTTCCCCTTTGGGCTCTGAAGAAAGGGACTAGGGGGCCCCTGGGACCAAGGG-GAATGGAAAACCTGGG-GCTTGAGTCTCAGCTGGAGGCACCCAGAGCATAGAGCATGCAGCATGGATC-----TTGTGGCTCTCCTCTCTGCCTCCACTCTGTACTGCAGACTCATCCTGAGTCCTCGCCCTACTTGTCCTGAGCTCGGTGCCTCCAGTAGAGGGGAACACAACCCCAGTTGGTTGTCA-GGACCCCATG-TCCTAT--TGGCTTAGCCCCTCATTTGCTCTTTGATTTTGGCCACACCACTCC------CTGGGTTTGAGTTTCCTGTTAGCAGATTTGGAGTGGGTCAGAGACCTCTGTCTACTCT a score=33512 s hg17.chr15_random 261656 1964 + 784346 ttgaatgaatgCACTTTTCTAAATCACAAGCTGGCAGAAGGGGGG-GCCTTTCTCAAACTCCATCTCTAGAGGTTTATGTTACTGTCCTGTCAAGAGATTCCAGATTCAGACCTTGAGTTCTGTGGCTGTGGACAAAAGCCAACAAAGACCCAAATCCTCTGTCCTTGGGAGCTTGAGGAGAGTTTACCAGTTCGAGTTCCCAC-TGGGTCTGAGAACTTTGCCTTTAAAATCCATTCCTGGCCCCTGCCTACCACTTCCTGCTCTGGGGAATAGAGTTGAGGGGGCCACCCTCCATCACCTTAATGTGACTCTCCCCACAGAAACAACAGAATAAACAAGTGGAACATCAGCTGGAAGAAGTAACATGAT---TTCTTTGTTTGCTCGCGACATGACTGCTCGGTTTGGGGGACA-CTCAGATGTAGAGGCCCCGAGTCTCGTCTCACCCACTCCCAGCCTGGGGAAGAAGGCTCACCCCCCAGAGTCCACCCCATCCCCCACAGGGTCCCTGATAACCCGGTCCCATGGGTGGGCCTGTCCCGGGGCAGGGGCAGTGGTGGCATTCTGGGGACATGTCTCTTGCAGTACCATCTCTGCCTCTGCCTGGTTAGATCTCTGTCTTCCTCTTCCTACAGGAAAAGAAAGCAAACAACGAGAAACAGAAAGCCGAAAGGG---------------AGCTAGAGGTGAGTGGACGGTGTGCAGTTTTCTCCTGTCCTCCGGAGAATGTTTCTTTCCTTCTCTTTCAGCACTTGCTTGGCTTTTCTCCCAAAGGTTCAAATCCAGAGATTGAACATAC---------AGAAAGGGAAACTAAATACGGACCTGTACCACACGAAACGTTCTCTCAGATACTTTGAAGGTGGGAATCTGGGTACCCTGTCATCCTTCAACCTGGCACTTTGACAGGTCTTCAGGGGGAGTCCTTTGGGCCCCATCTCAA-CTCTCTCATTACAGAAGAGTCCAAGGATCTGGCCGTCCGTCTGCAACATTCATTGCAGCGTAAAGGAGAGTTAGAGCGGGCTCTCTCTGC--TGTCACCGCCACACAGAAGAAGAAGGCGGAGAGGGTGAGTCCAACCACCTGCCCCGTCCCCTGGGAGCCTGGCTTCGCAGACAGAGGAGTGAGCCTAAAGGTCCCTTCTGCAGGATGGAGTGTCCTGCCCAGAAGGCAGCATGGCCATTTCTCACTGCTTTT-TTGTATGGTTGTTAGCGGCAGCTT-GGGACTGAGTCAGCTGCTGTGGGTGAGTTGGGGGGCACTCTGGGGAGAGAGCACAGGACGTAGAGCTTGGAGGCCAAGTGCCTGCCATGCCTTTAC---CTGGCTGTGGTCTTGGCCAAGTCCTCAGTGG-GTATTGGGTACTTGTACTGTGAAGGTACAGAAGAGTACCTTTAGTATGTTACCATTTCTGTAGAGAGAGGAAACGTGTGTGTGTGTGTACATATTATGATAATATACATAAAATATGTTTGCAAGTGTTCATAAAAACTCAGGAGAGAGCAACAGGGTGGCTGGGAGATACTTCCCTTCTGTACCTTCTGAGTTTGGGACTATGTGAATGTATTATCCTTTCAAAAAGTGAACAAAAGATTAATTTTCCCCTTCCTAGCTGTGCCCCCACCCCcagcaagaaaaatgggcttagagaattggatagatctgggtgtttaaatcccagctctg----cctaagtgatcttaggcaagcacttaacctcaaatactccatgttttttcatctacacaatagaggtcatcatagtaactgtctcccatggtagttgcgaggattaaatgggattgctagc-atggtatctggtgaagcactccataaaAGTTCAAACAGTGGTAATAATAACAGTAATAACAATAGCAATATTATCTGATC-TCTCTGGGCCTCTGTTAGCCAGCTATAAAT-TCGATCTCTT-----TCCCTGTCCCTTCCAACTTTACTGAGTTCTTTAAAAACCAA-ACCACGGGCTTGG s mm7.chr2 32305640 1770 + 182548267 TTAATTCGACACACTCTGCCAAGTCCCAAGTTGGCAGAGGGTAGTCATCTTTCTCACACT-TGTTTCTAGA-------GTTACTCTCCTTTACTGTGAACCCAGTTGCACA--------------GTTGTGAGTGAGAGGCAGGGAGAA--TAAATA------CCCTGGGAGCTTGAG--GAATTGGTTAGCTCATGGACCCATGTGGCTCTGAGCACCTT---TCTCAAATCCAT------------CCTCCCGTT---CGGTCTGGGG--TGTCATGAAAGGGGCCAGGCCTAGTCCGCTTCCTTTGACTCTTCCCACAGAAACAACAGAACCAAGACACTCTGGATCAACTGGAGAAAGTAATGTGATAGATTCTATGTTCGCTCTTTTCATGACTGATGGGGGTTGGGGAGACCTCAGAGGTGCAGGCTTCG------GTCTTGCTTTCTTCTATCCTGG---AGAAGACTCACCCCACAGGGT-------GTCCTCCATAGGATCTTTGATAACCTGACCTCAT-GGTGTGCCTGTCCTGGTGT--------CTTTGTCTTTCTGGGGGCTCGTCCCTT---GGGCCACCCCTGCTTC--CCCACTAAGAGCTGTACTTCCTTGTGCCTGCAGGAGAAGAAGGATTATCAGCAGAAGCTGGCAAAGGAGCAGGGCTCTCTCAGGGAACAGCTGCAGGTGAGAGGTC--TGGGCAGTGTCCCCGAGTTCTCTGGAGAGTGTTGCTCTCCCT-TCTCTCAGCATTGG--TGGCCTTTTCTCCAAAGGTTCACATTCAGACCATAGGCATCCTGGTGTCTGAGAAGGCAGAATTACAGACGGCCCTGGCCCACACTCAGCAAGCAGCCAGGCAGAAAGCAGGTAAG-GCCTGGGAACCCTTCCGCCTGT---ACTGATGCTGCGGCGGG--------------CCCGAGGGCTCCATCTGGACCTCTCTTGTTCCAGGAGAGTCGGAGGATCTTGCCAGCCGACTACAGTCCTCCCGACAGCGTGTGGGAGAGCTGGAGCGGACACTGTCTACCGTGTCAACGCAAC-----AGAAACAGGCAGACAGGGTAAGACAGGTCGATT-CTCTGGCCATCAGCAGCTT--CCTGGTGGAC-----AGTGAGCCTGAAGGGCTTTGCTGCATGGCCGGGTGTCT--CACAGCATACACCAC-GCCAATTCTTGCTGCTTTTGTTGTGTGGTTGGTAAAAGCAACCTGGGGGATGGGTACCCTGC--TGGGTAACTGGGG----ACTGTATAAACA-AGCACTGAATGCAACACCTAAAGG-CAGGTGCCTGCTGTGACCCTGCTGTTTGTCTGTGGCCTTGACCAAGTGCTAAGTGATGGGATGGGTGCTCAT-CTCTGA----ACAG------ATCTTCAG-ATGGTGCCATTTGTGGAGGGAGAAGAA---TGTGCGTGTG--------------CAGTGTATGCAAATCATGTCTGAGAGGATTGGT--AAACTTGGGTGGGG-----AGGGTGACTGAATGG------CCATCTG----TTCAGAG-------------GAGAGCAAGACTGAGATAGAAGTTAAATAAGAG---AAGTATCCTCCGCTTATCTGCAGCCCC--------caggggaaa-gggcctagagagttagaca-cccgaaatgttcaagtctcagctctgttgacctaagtgatttcaggccagcacgtag--------actttgtgtgctgtt-tctgcccagtgtggg---tgatggcaactgt---tctagatgtgtatgaagattgcatgggattattagcaacagtgcctggt-aagtgct---------------cagtg--------aacaataTTAACAACACCAGTGGTGTCCAAGAGTTCCTGGCCCAATGCTAGCCTGCTGTAAATGTCAATTTTTTAAAACTTCATAAGGCTCCC-ACCTTACTG-----TCCAGAAGCTAAGATCACAGTCTTAG a score=18625 s hg17.chr15_random 263658 906 + 784346 CCTAGCCCTGGCCCTTTTAAGGGGCACTGT-GTGGAATGGCCCGGCCTCACCAGATTGAA------ACTTCTCAC-------TCTTCAGCAGTTCTCCAGCCGCAGTAAAGCACGTATGGAGTGGAAGTTAGAGCAGTCCATGCGGGAGCAGGCACTGCTGAAAGCGCAGCTGACACAGGTGAGGTGTTCAGAGGGAGGGATGTGGAAGGAAGATGACCCCAGGTAACCAGGAGCAGGTGAGGACCAGTGACA--GCCCTTCCTAATTTCTGTGCCCATTCTTGCAGTTGAAGGAGTCACTTAAAGAAGTCCAGCTAGAGAGGGATGAATATGCTGAACATCTAAAAGGAGAGAGGGCCCGGTGGCAGCAGAGGATGAGAAAAATGTCGCAGGAGGTGAGATCTGACCCTTCAGCCCCCCCacattagataggtcactg-gatctttctgggcacctgtaaaatgggaatagtaGAGCCAGAGGTGGTCCTGGGACTGGGCTTTGTGGAGGTGGGGGCAGAGAGGGAGATGGTAGCATGTCCAGCCTCCAGCCCCTCTCTCCAGGGCCCTTT----CCCCCTGTGCTTTGGGCAGGTTTGCTCGTTGAAGAAGGAGAAGAAGCATGATAAATATCGGGTAGAGAAGCTGGAGAGGAGCTTGTCCAAACTCAAACACCAGATGGGTAAGATGGGGCTGGCGTGACCTGGCAGCAGGACTGGCATCAGAGGGCTGTGAGGGTGGCTTGGAGTGCCCCAGCGAGGTGGGTGGATGGAAGGGCTTTGAGGCAGAGGGAAAGAGGTCTGTGCCAGGA-------GACggcaagtcttgtcatctca-atgagcctcagtgtccccatcagcaaagagggCCCGTTGTCAGCCACCCGCAGTGCTCTTTCTCTGAAAGTGCTTTGGAAGACTGGCTACCAT s mm7.chr2 32309933 823 + 182548267 CCTAGCTCGCACTCTTGTGGGGAGCACTGCAGCGGAACAGCCCAGGCTC-CCAGACCTAACCCCTCATTTCCCTCGCACAGTTTTCTAGTCAGTCTTCGGCCGCAG----GCG-GTAATGAGC---AGTTACAACATGCCATGGAGGAGCGGGCTCAGCTGGAGACCCATGTTAGCCAGGTGTGGATCTGTGGGGGCAGG-----GGAAGGGCATGACCCCAGATGGCCAAGGGCAGGTGAGGACCAAGGACACAGCCCCAAGTAACGTGTACATTGACCGATGCAGCTGATGGAATCACTGAAGCAGCTCCAGGTGGAGAGAGACCAGTATGCGGAGAACCTAAAAGGAGAGAGTGCCATGTGGCAGCAGAGGGTACAGCAAATGGCGGAGCAGGTGAGGCCTCGCCTCT--------------------GGTGTCTTTGCTTTTCCTGAGCATC---------AGCGTGGTGCAGCTGAGGG--GTTCGGGGCTTTGGTTTTGCAGAGGTGGGCCTGGGGATGGA--TGGTG--------------------------CCTGGGATCTCTAGCGCCCCCTGTGCCTTGGGCAGGTGCATACACTGAAGGAAGAGAAGGAGCACAGAGAACGGCAGGTACAAGAGCTGGAGACCAGCTTGGCCGCACTCCGGAGTCAGATGGGTGAG-TAGCGCAAGGGTGACCTGAGAGCGGGAGTGGC-TCAAAGGCC------AGTGGCTTCCATAGCCCTGG--GGGCAAGGGGGTGTGAGAGCATTGTA--ATGGGGCAAAAGGTCTCTGTCAGGACTGACCAGGTGACACGCCTTGTCATCTCTTATGTCCCTCTGTGTA---------AAACAGGGT---------GGCATGCCTACTGCTATACCTCTGCAGGTG---------ACTGAGCACCAC a score=15713 s hg17.chr15_random 264684 776 + 784346 CTCTTATTGT--CTGCTTCCTTTCTCAGCTGAACCTCTGCCCCCGGAGCCCCCAGCAGTGCCCTCTGAGGTGGA------GCTGCAG------------CACCTGAGGAAGGAACTAGAGAGAGTGGCAGGAGAGCTCCAGGCCCAGGTGGAGTACAATCAGCGCATAAGTCTCCTGAATGAGGGGCAAAAGGAGAGGCTTCGGGAGCAGGAGGAGAGGCTTCAG---------GAGCAGCAGGAGAGGC-----------TTCCAGAGCAGGAGGAGAGGCTTCA-------------------------------------------GCAGCTGGCCGAGCCACAGAACAGCTTCAAGGAGCTGGTGCGTTGCCCCAGCTGGGGAGCCTGCCCTCCTCcctagccctccaggcctttgtttccccacctataaaatggggcagtGTAGCCCTCAAGTGAAATGTTACTCCTAAAGGCACCTGT-GAGCCAGAGCCCTGCTCTGGTGGCTGTGGGAGACAGGGGATGATTTTTCTAACCTGCCTCCACCCTTCCCGGTGCCATGGGAGGCAGT---CACCAAGTTCTGGGGTCTCCAGCTGCAGTGGGTGGCTGCTGATTGCTTCTCTCTGTCCAGAACAATGAGAACAAG---------AGCGTACTACAGTTGGAGCAGCAAGTAAAG------------------------GAGCTGCAGGAGAAGCTAGGCAAGGTGAAGGAGACGGTAACCTCCACCCCATCCAAGAAGGTCTGGGAGGTGGGTGGGCACCAGCCTCTGGGGAGGGGAGGTGCCAGGC-CAGCGGT--AGCTCCAGCCCGGGGGCAGGTGACCCCAGCACCCTCCAGGGCAGTCCTGTGGCTGTTTCTTGCTT s mm7.chr2 32310866 780 + 182548267 CCCTCACTGTGCCTACTTCCTTTCTCAGAGGAGCCACCGCCTCCAGAGCCTCCAGCTGGGCCCTCCGAGGCGGAAGAGCAGCTGCAGGGAGAGGTCGAGCAGCTGCACAAGGAACTGGAGAGGCTGACGGGACAGCTACGGGCTCAGGTGCAGGACAATGAGAGCCTGAGCCACCTCAACCGGGAGCAGGAGGGGCGTCTGCTGGAGCTGGAGCGGGAGGCCCAGCGCTGGAGCGAGCAGGCCGAGGAGCGCAAGCAGATCCTGGAGAGCATGCAGAGTGACCGCACCACCATCAGCAGAGCACTGTCACAGAACCGAGAGCTGAAGGAGCAGCTGGCCGAGCTGCAGAACGGCTTCGTCAGGCTGGTGCG--------------AATCCTGCAGGCCCTCCTTGCTCACAGGGAATGTAACCCTCAA-----------GGGTGCTGTCCACCTCACATGAGGTGCTAGCTGTCAAAGCACCTCTCAATCCAGAGACCTG---TGGTG--TGTGGGA--------ATGAT------------CCAGCAGTCTTCCCTGCTCTGTGGGAGGGAGCACACATGCAATTCTGGGGACCCCTGCCACATTAGGTC-CTACTGACTGCTGCCTTCTGTCCAGACCAATGAGAACATGGAGATCACCAGTGCGCTGCAGTCAGAGCAGCATGTCAAGAAAGAGCTAGCCCGGAAGCTGGGAGAGCTGCAGGAGAGACTGGGAGAGCTGAAGGAGACGGTAAGGCCTACCAC---------------------------------------------GGGGGGTGCCAGTCATAACAGTCTAACTGCAGCCTGG--------------AGCA--------GGCAGTCCTG-GACTGCTCTTCATCT a score=3804 s hg17.chr15_random 265961 227 + 784346 attcaagtacttcgcatctctaggtctctgtttctttaacttcaaaaggaagttagcattttccttacagaggtgctgaggattaaatgagataatacatgggaagcattaggcct--gtagcacatttagcagatggtggttGGCTCCCATACTTTTCTACCATTCTGTGGCCTACAGTTGAAATGGTGGGAAGAGGACATGAGATTTGAGGCTGGGGAAGGAGGCAT s mm7.chr2 32311723 195 + 182548267 GTTCAAATGCTTCCCATCTCCAAACCC--ATTCACTGAACTTAAAAGATGAGTT-------TCCTCAGAGAAGTGTTAAAGGTTAAATGAGA-AATGTGCATAAAATATCAGGCACTAGTAGTTAGTGCAGAACAGGGTGGGTTGCT------------TTCCACTCT-TGGCCTA------AAGTGATGAGAAAGGTG-----GGTGTGAGGCTGGTTACAAAGGCAC a score=35344 s hg17.chr15_random 266318 1438 + 784346 TGCCCTCACACCCAGGGTCTTCCTGCAGGTGGAGCTGAAGAGCCAAGAGGCTCAGAGTCTGCAGCAGCAGCCAGACCATTACCTGGGTCACCTGCAGCAGTACGTGGCCACCTATCAGCAGCAGGTGGCCGCCTATCAGCAGCTGACCTGTGAGAAGGAGGCGCTGTACAGGCAGTGACTGCAGCAGACCCAGCTAATGAACCAGTTGCAGCAGCAGGAAGCTTGGGGCAAAGCGGTGGCCGAGATGGCCTGCCAAAAGTTGCAGGAGACCCAGGGGAGGGAGCTGCCGAGGATGGGGCTGTGAGGGGGACGACCTGGCAAACTCTGTGCCTTCTCACTCTTTCCTGGCCCCTTAGGAGCGTCTGGAAGCTGCCAGCCAGCAGAACCAGCAGCTAACGGCCCAGTTGAGCCTCATGGCTCTCCCTGGGGAAGGTACGGGAGACCGCTCAGAGGAAGAGGAGAGAGCCCCAGGAGGAAGGGGGGACTGCTAGCAGCATAGTATTCAGGAGTTGGAAGAGACCTTTAGAACAGCTGGTCATtatactaacc---gggtgcctgcactaagttcagcatcaatatggtgacctcctgtgagcggggggccaccaagttgcctaaggatggctgaactggccgaggtcagaaagggagcaggtcagaactcccgcaccgaccagtagtgggaatgtgcctgGGCAGTATAGCAAGATCTTGGTTCTTCAAAGTAAAAATAAATAACAGCAGCTCATTCCTCTCTGGGGAGGGCCTGGCTCAGGGTTACACAATGAGGGTGGAGGCAGAGGTGGGCCCACAATACTTCCCTTGTTGAGTTGTCTGAGGACCCCTCTGGCCACCACC--CCCACCCCCAGGAGATGGAGGAGGACATCTGGACAGTGAGGGGGAGGAGGCACCTCGGCCCATTCCTAGCATCCCACAGGACCTGGAGAGCAGGGAGGCCATGGTGAGCCTGACTCCACCTGAACCCATTTTGCCTCCTTCCTCTGTGGTCCCTCCAAGACCCCTTTATGCTCTTCGTTTCCCTGCCTTCTGATTTCTCTGGACCCTCACCCCTT--CTGGGAGCCAGTGGTCAGACACCATTTCACCTGTGACCAACATGTGCAGTCTCTGGGGCCCCAAGGGAAGGGGCTGCGCTCCACCTCTCTGCCCCATTTGTTCTGTGTATGCCCCTGCAAGA-ATGCTCACATCTTGCCCTCAGGTGGCATTTTTCAAGTCCGCTGGAGCTAGTGCCCAGGAGAAGCAGGCACAGTTACAAGAGCAGGTGAAAGAGCAGAGGGTGTGCTGCCAGCGCCTGGCTCACCCGGTGGCCTCGGCCCAGAAGGAGCC--AGAGGCAGCCAGAGGCCCTGGAGCCCCAGGGCCTGGGGGCGAGTCTGTGAGTGGGGAGACCCACCGGGCCCTGCAGGAAGTCACGGAGAAGCTG s mm7.chr2 32311918 1083 + 182548267 TGCCCTCATTCCT--GGCCGTCCTGCAGGTGGAGCTCAAGAGCCAAGAAGCACAGGGTCTACAGGAGCAGCGAGACCAGTGCCTGTCCCACCTGCAGCAGTACGCTGCTGCTTACCAACAGCACTTGGCGGCCTATGAGCAGCTGACCTCTGAGAAGGAGGCAATACACAAGCAGCTTCTGCTGCAGACTCAGCTCATGGACCAGCTGCAGCATGAGGAGGTACAGGGCAAGATGGCAGCCGAGCTGGCCCGCCAGGAGCTGCAGGAGGCCCAGGTGAGGCAGCTGTTAAGGCTGGGCCC---AGGGGGAGGACCTGGCCTCCTCTGTGCCTTCTCACTCTTTCCTGGCCCCATAGGAGCGCCTAAAAGCTACCAGCCAGGAGAACCAACAGCTCCAAGCCCAGCTGAGCCTCTTGGTCCTCCCTGGGGAAGGTA----AGACCACCCAGGAGGAGAGGA-----------------------------------CTAGAGTTGATGTATTTGGAGAAGCTTTG-------------ATTGGGCTGACCCCAGGGT-----------ATTCAG---------------------------------------------TAGGGATA-----------------CAGAGGTGGGGC---TCTGAGCTCTC----------------------------------------------------------------------------------TTCCCCT--------------------------------------------------AGCCCACTCAGTCTACCTGATGGGATTATTAGAGGA-------GACAACCTACTGTCTGCCCCCAGGAGATGTGG------ACCAGGAGGAAGAAGATGAGGAGGTTCCTCAGTCGAGTCTGGCCATCCCAGAAGACCTAGACAGTAGAGAGGCCATGGTGAGCTGGGCTCTGTCTT-GCCCCTTCTCTTTTCTACCTCTGTGGTCC----------------------TCGGTTTCCTACCCTCTGACTTCTTTTGATTGCCACTTTGTGCCTGGAAGCCAGTGGTCAGTCTCCC-------------------------TCTCTG-------------------------------CCCTGCCCCCTTTGTCCTGAGCATTTCCCTGAAAGGCACACCTCCCTCTTGTGTGCAGGTGGCATTCTTTAATGCCGCTATAGCCAGAGCAGAGGAAGAACAGGCCCGACTACGTGTGCAGCTGAAAGAGCAGAAGGCACGTTGCCGGAGTTTGTCTCACTTGGCAGCCCCAGTCCAAAGCAAGCTTGAAAAGGAGGCAGTGGT-------CCCCAGGA-ATGTGGATGACTCTGCATCTGAGGAGAGCAATCAGGCCCTACATGTAGCCATGGAGAAGCTG a score=28080 s hg17.chr15_random 267806 863 + 784346 TGAGGGCAGGTC---GCTGGCGAG---ATGTGACCCCATTATTTTGGCTCCAGAGCGGCTTTATGGACCACCTGGAGGAGAAGGCAGACCTGAGTGAGCTGGTGGAGAAAGAAGAACTTGGATTCTTCCAG--TACTACAGAGAGAGATGCCATCAGTGAGTGGGAGGCCAGGGCATGGCAGGGGGAGC--TGCAGGGCTGT----TGGAGGGGCCCCAGCGTCTGAGCCCTGTCCTC-------------CCGCAGGAAAGTTTATCACCCTATAACAAAGCCAGGGGGCAGTGCCAAAGATGCAGCACCGGGAGGAGG------ACACCATCAGGCTGGCCCTGGACAGGGAGGAGATGAAGGTAGAGTGTGCAACATCTCTGCGGGGGTGGGGGTGGCTGTGACGGTGAGCGCTGGCAGCAGCGTGACAGCTGAGCACCCCTCCCTCCAGGTGAAGCTGCTGGAGCTGCAGGAGATGGTGTTGCAGCTGGTG-GCGACTACAAGG---GACACAGCAAATTCTTGGTGACTGCCCAGAACCCTGCTCATGAGCCCAGTCCAGGAGCCCCAGCCCCCCAGGAGCTTGGGGCTGCCCACAAGCATGGTGGTGAGTAGAGCCCTCAGGCGGGGTGGGCAGGCAGGAGCAGGGGGGCTCTCACTGAGCTCAGAT------CCCCGCCTCCCTCTCTCCAAAGATCTTTGTGAGGTGAGCCTCACTGACAGCGTGGAGCCTGTGCAAGGAGAGGCCAGGGAGGGTTCTCCCCACGACAACCCTACTGCACAGCCGATCGTG------------------CAGGACCACCAGGAGCACCCAGGCTTGGGCAGCAACTGCTGTGTGCCATTCTTTTGCTGGGCTTGGCTGCCAAGAAGAAGGAGATAAACATCACCATCGTCAAAGAG s mm7.chr2 32313032 902 + 182548267 TGGGGGCCAGCCAGGGCTCCTGAGTCCCTGAGACCTC--TGTCTTGGCTCCAGAGCCGCTTCCTGGAGGTCATGCAGGAGAAAGTGGAGCTCAAGGAGAGGGTAGAGGAGCTTGAACATTGCTGCATTCAGCTTTCTGGAGAGACAGACACCATTGGTGAGGTGGAGCCCAGCCCAAGGCAGTGGGGGCTGTGCAGGGGGGTAGACTGGGGGAGCCACAGTGTCTGAGCCTTGTCCACCTGCCTGCCGTCTCCACAGGAGAGTACATTGCCCTTTACCAAAATCAGAGGGCGGTGCTGAAGGCTCGGCATTTGGAGAAGGAAGAATACATCAGCCGGCTGGCTCAGGACAAGGAGGAGATGAAGGTAGG----CCTACACTTCTGTAGTCCAGGCCCTGCCT---------AATCTGGGCTGGGCCCTTCAAGTTGAGCTCCTTTTTCTCCAGGTGAAGCTGCTGGAGCTCCAGGAGCTGGTGTTGAGGCTTGTGAACGAGCGCAATGAATGGCAGGGCAAGTTCCTGGCCGTCTCTCAGAACCCTGGTGACGTGCTCACCCCAGTGCCCACAGGCTCCCAGGAATTTGGTGCTGCTGACCAGCAGGATGGTGAGTAGAGCTGTT--GTCTCTTGGGAAGGCACAAAGGGGAGGAGTCCCATGGCGTGCAGAGCCATGACCCCCTCCCCCTTTCTCTAAAGACCTCAGGGAGGTGAGCCTGGCTGACGATATAGAGCCTGCACAAGGAGAGGCAGGGGTACCTGCTCCCCATGAGAACCCTACTGCACAGCAGATCATGCAGCTGCTGCGTGAGATCCAGAACCCCCGGGAGCGGCCAGGCCTGGGTAGCAACCCTTGCATCCCCTTTTTCTACCG-----TGCCGATGAGAACGACGAGGTGAAGATCATGGTTGTATAAAAG a score=71444 s hg17.chr15_random 268712 1835 + 784346 ATCTCCTACACAATTCATTTACTTCGTTTGAATGTTATAGCCACTTATGATTATTT----GTGTTTCTAATTTATAGTTTAAGTTTATTTGTAAATAGTTAAAAGAGAGTGGGTCTCTGTG--GCTTTCACTGATGTTCACTCTGGCATACTTTCGCAATTTTCTTTTTC------AATTTCATAATTGTAGGTCATTAGCATGCATATTGAGTTTGCCCTTACGTGGTGGGAGTTCAAACACACAAAGACCCACTATTTGCACAAAACTATTCTTGCTGGTTTGGAATAGGCTGCCATGTGTTTTTAATGTTATTGCAGCATGTATATTCATTACAGAATTCAGATAAAATGTGCCTATGTTCTGCTGTTGT--TTGATCTAATCTTAATCACAGTGAGCTCTTCATTAGCACAATATGTGGTTTGCCC-CAAGTGTGCACTATTTAATACTTTGTAATATGCCACCAAGAGTACTGACATTTAGAGTTGTTTAAAGGCCGAGAACTGGAAACAGCCTTTCCCTCATTTTCTGTGTATTGGTGATGGGAGTAATAACATTTTGGGGGAGCTTTTTAAATTTCACAGAAGAGGAAAGTTGCCTGCTCTGGCAGGTATGTGCAAGATAG------------AGTGTGTTTCATTTGTTCTGTTGCCAAGAATTAGTGCTGTACTATTGTAGTTCCTTTAGGATTTGTATGTGCTCTGGGCTCATGAAGATATTGCA-----TCATGAGCTTCAGCA-GTTGTACTCTTTTTTGATGACCTAAAAAGGGCTTATTTCTGAGGAATGAAAGGTTCCCATCATTGACTACGGATGTGGAAAACCTTTCCTAGCTTAGAGCATTTGTATC-----TATATTTTAAAGTCAGAGTTCATGTTACCTGTTTTAATCACATGACTGCATGTCCCAGTACACAAAAGGGCACTGGTTGGCATTCTTCTTAATGTATTTAGTAAAGATCAGAAGAAATCCTTTAAGAGTT-----CAAATGTCCCTGGAACAGGCATACAGGCTCTAGTCAAGAATGAATTAGAGTGAAGGAAAGCTGTGTGACACCTGGCATTCCTCTGT--TCATGGAGCTTCTTTGAGGCTTGAAGATTGATTTTACCATCTAGACCACTCTGCCTA---TTCTTCAACCACCTTGGTTACTTTGACATAGGAATTGACTTCTTTTCCTTGAATGGAAAACACTTTGAAATAATAATAAACATTGTTATAAACTAATATATGTGAGAGTGCTTAGTTGAAACAAAAAGGAGTTTTAGTAGACAGTATTATACTATCTTTGAAAATCAAGGAGAAGTTTATGCAACTTAAAATGTGTACAAACTGCAGTGCAATCTACTGTTGGTGAA-TGTCAGTGTATTATCAGGAAACATGTCTATACAATCACAGAGTTATATTTCCTCACAAACTTCTTTGTGAAGAGTGAAATGTGTTTCTGTACCTCTGGGTTTCACTTACGGGCATATTTTGTGCAGTATTTATGTGATTGTGCCTATGCATGATGAATGAATGAATTTCAGTTGTACATTGCCTAAATCATAACTTGATGATGCTTGGGAAAGACTCAACAGTT-----AAAACTTCATGAAGTTCTAATGTCTGTGTTCCAAAACACATCACATTATT-AGGATGTAGGGAGATATGTATGTGTGCTCCCTGGGGTGGGGATTTCTAG--TTACTAGACCATCTCCATTTTTAGCATTTGGCATCCTCATGATACTTTTATAAATACGACATTAACAGGAGAGCAGCAGTACGATTTTGCCGATGGAATAACAGATTTGCCGGCAATCACTGAAAGA--GTGCAAACATCGGGTCCTTGTGACTTCAA-CGGACTCTTCCAAATTGTATGAAT s mm7.chr12 4608702 1800 + 117814103 ATCTCCTACACAATTCATTTACTTCGTTTGAATGTTAGAGCCACTTGTGATTATTTCTATGTGTTTCTAATTTACAGTTAAAATTTATTTGTAACAATTTCAAGGATAGTGGGTCTTTGTGTGGCTTTCCCTGCTGTTCTCTCTGGCATCCTTTAGCATTTTTCTTCTTTTTTAAAAATTTGGCACTTGTAGGTCATTAGCATGCATATTCAGTTTGCCCTTACGTGGTGGGAGTACAAACACACAAAGACCCACTATT-GCACAAA-CTGTTCTCTCTGGTTTGGAATGGTCTGCCATGCTTTTCCAATGCTCTTGCAAATTATATATTCATTACAGATTTCAGATGATGTTTGCTTATGTTCTGCTATTATATTTGATCTAACCCTAATCACAA-GGGCCCATAATTGGCTCCATCTGTGATTTGCCCTCAAATAAGCACTGTCTGTTACTTTCTAATATGCTACTATGAGTACCAATAGTTAGGTTTGTTTGAAGGCCACGAACTGGAAATAGCCTTTTCTATATTTTCTCTGTAAACCGAGCAGGAGCACTAACATT--GGGGGACCTTGCCTGGTCTCACAGAAGAAGAAAGCAGTGTGCTCTGACCACTGAATGTAGAGTAGTGAATGTAGAGTAGTCTGCCTCAGCTGC-------CCACGAATGAACGCGGGCCTAGGGCAGTTTCCTTATGGTCT-TAGGTGCTCCAGGCT---GCAGAGCTCCCAAACTGCTCTGGGCTCCAGCACACAGTGCT--TTATTGATGACATAAACATAGACTGTTT-TCAAGAATGGAAAGTTTCCATCACTGACGGTA-AGGTAAGAAACCATCCCTATCTTAGAGCACTTATATCAACAATATATTCTAAGGT-AGACTTTATGTTACCT-CTGTAGTCAGGTGACCACTTACCCTAGTATACAAAATAACACTTGTTGGCATTCAT---AATGCATTTAGTAAAATCCATAAGGAAACCTTAAAGAGTTTGTAGCAAA----CCTGAAGCCGACATGTAGGCTTTAGCCAAG---GACCCATAGCATAGGGAGAGCACACGAGAGCTGGCATTCCTCTGTGCCCAGGAGGCTTCTTAAGCGATT----ATTGATGTTACTGTCTACATGTTACTGGTTAATAGTCGTCTCCCACATTGGCTATTTTGGCATAGAATTTTACTTCTTC-CTTTGAGTGGAAAGCACCCTAAAC--ATAATAGACATTATTATAAATTAATATGTGTGATAGCACTTAGCTGATAT------GAGTTTTAATA--CAGTATTAAACCATATTTGAAAATCAATGAACAGTTTATGCAGTTTAAAATGTTTACAAATTGCCGTGCAATCTACTGTTTGTGAAATGTCAG------------ATAGGTGTATATACAATTA--GAGTCCTACT-CCTCACAGCATTCTTTGAGAA-AGTAAACCATGCTTTTATACCTCTCGCTTTAATTTAAAGGCATATTTTGTGCAATATTTATGTTAATGTGCCTATATATAATGAATGAATTA-TTACAATCGTGCATTGCCTAAATCATGACTTGAGG-------GGAAAAAAACAACAGTTTAGTTACAGTTTTACAAAACCCAAATATCTGTACTG-GAAACAT-TCACATTCTTGAGGTTATTAG-----ATGTCTGTGTGCTCCCTGGGTGGGGGTTCTGTAGAGTCCTTAGACCACCTCCATTTT-AGCACTTGCCATCATGACAGTATTTT-----ACATAACATTCATAGGAAAGCAATAATTTCAATTTACAGATGGG-TAAGAGAATTGCCTGCAGTCACTAAATGACAATGCAAAGAC----------TGATTTCAAACTGACTTTTCCACGTTATATAGAT a score=36667 s hg17.chr15_random 270704 1063 + 784346 TGCATTCTTTGAG------TTCAGTTTAAAGACAACTACGAGCATCTGTAACCAATCTGACAATAATGTGTTCATCAGGT----GCCTGTGGATTAAATCACATACTGGC---ATATTTAAGCTGAATGTCAATCTGGAAAATAAATTGACTGTATTAACGGAAATACCACTCTTTGTGTAGATATTTGTCGTATATTGAAGAAAAA-GCTAAAAAGAATGGAAATCGCATGACTATAACTTAAGTCTTTCTTCAAAGTGCATGCAGTCTTTTGCGATACCTCATTCAGCCAAGTATTGGTATTCTTCCTCATTCGGTATAAGGCAGCTTTCAATTTGCTTAGAGGGCAACATTGGAAGGTTAGAGTTCATCAGAAACAGAATTCTAAAATGTGAGTTCAATTCAATAAATTTGAATTTCTGTAGGAAGAATCAAATCACCGATTTAAAGATTGCAATATATAATAATCATTTTTAAAGTATTGGATTAAATCTGATAGGTTTTCCAGAAATGAACAAAAATCAGCTCTAAAACCAAAGCTGAT-TTTTAGAAAATTTGAAAA-TGTAAATCAGCCCTATCCATACTATAGTTTCTCTAAAACTTTATCTGAAAGAGTCATTTTAAAATAAC----TATTAAACAATGTAACTGCTATCTTAATGTTCTGAAATAAGTTAAAACATTTTAAAATATGAATACTGTAAAGGAAATAA--ACGGTGGGAAGGAAAAGTAGAGAAAGAAATGCCAATTCCAGTCCAAAGCTTTATTTGCCAAGTTTTCTTAGAATGAATTTTACCAATTTATGAATTCTTGTAAGCGGAATGTAAAACGGAAATACTGAAAGACTTTTGCCTAAAGTGGCATTATTGACTGCTGGTGTGATGCTACTGTAATGTAATAAATTATTAAGTTGTTGCAAAGTGCTGTTTTTGCCTTAAAATTTTATTCTGTGTGTCTTCAAAAATATAGTATTAAAGGTATTGATACTGTGCAAATGCTGGGCATGCTTGGCATGAGATAAT---GTTTCATTTTTACAAAATTGTAATATAACTATGCAA--GGGTTTATTAAAAGAACACAAA s mm7.chr12 4610898 996 + 117814103 TAGATTCTTGGAACTGGCATTCAGGTTGAGCTCA-------GCATCTGCAATCAGTCTGAAAATA---TGTTTAACAGGTAGGTGCCTGCGGAGTAAGTCACATACTGGCCCAACAATCAAAGCAAATGTCAGTACAGCAAGTAAACTCACTGTGCTAACCGAC-TACTACTCTAGGCAT-----TTCATCATACCTGATAGAAAGCTGCAAGAAAGGAGATGAGTGACAT-ACAATCGTTTACATTGTTCTTATAAGTGCATGCAATCTGTTGCAATCCCTCATCCAGCCGTGTGTTTGCTTTCTTCCTGATTTAAAGTAAGGCAGCTTCTG--TTGCTTAG--------------------GACTTTCTTGGAGACATAATTTACACATTAGAACACAGTG-GATCAACTTGAACTT--GTAGGATA--------CACCAGTTTAA-GAGCACACTGTGTGACAGGCATTTCTAAAGCATGCACTTGAACTTGATGGGTGTTCCAGCAGTGAAGAAAAGGC-----TATAGCCAAAGCTGTTATTTTAGAAAATTTAAAACCTAAAAGTTAACCTTATTGATCATATACTTTCTCTGATTCTTT--------GAGAAATTTTGAAATAATGTAATACTTAAAACAGTAATTGTT---------------------TTAAAATACAACGCGATACTAGAGTTCAAAAGAAAATGATTAGGGCTGAGAGAAAAGGCAGAGAAAGAAATGGCAGGTCCAGTCCAAAGCTTTATTTGCCAAGTTTTCTTAGA-TGAAATTTACCAAGTTATGAGTTCTTGTAAAT---ACGTAACA---GAATACTGAGA-CCCTGTGCCTGAA-TGGCATTATTAgatgctgctgtgatgctgctgtgatgTAATAAACTATTAACTTGTTGCAAAGTGATGTATTTGCCTTAAATTTTTATTTTGTGTGTCTTGAAAACTATAGTATTAAAGGTATTGAGATTGTGCAAATGCTGGGCACGCTTGGCATGAAATAATCTGTTTTTATTTTTACACAATTGTAATATAACTATGCAAGTGTGTTTATTAAAAGAACACAAA a score=10914 s hg17.chr15_random 272289 249 + 784346 GACAGTGGGGCTAACTGTGGACCAGGCGAAGGCACGGGCTGCTGGGG-----TGGCC--CCCCTTCCCCGGTGTATATATTGTGTCTGTGTAAGGTTTTGTATATTCCAGAGGGTAGGGCCACCCCTGTATCATACCTAGCGGTGGTTGGAGGTGGCACATGGGGAGGAGGTTCTAATAATTATTTGTGGCTGGGAAACTTACTTATTGCTAGCA-TAGGACAGAGGA-AGAAGGCAGGGATGGGGTCATGGCTTCCc s mm7.chr2 32314918 248 + 182548267 GACAATTGGGGTAACTACG--CCAAGC-AGGACAGAGGCTGCTGGGGCAGGGTGGCCTTCCCCTCCCCCGGTGTACATATTGTACCTGTGTACTATTTTGTATATACC--GGGGTAGGGACACCCCTGTATCA----TAGTGGAGGTTGGAGCTGGCAAAT-GGGAAGAGCTTCTAATAATCACTTTGGGCTGGGAACCTTATTTATTGGTAGTGTTAGGTCAGAGGGCAGGAGGCGGAGACAAGGTTGTGGCACCTG a score=12641 s hg17.chr15_random 279155 490 + 784346 TCACTGCAGCTGTTTTGCCCTCTTCTTCCCCAC----------CCGCCCCCCCCGTCTCTTTCCTGGAAGTTCCCTA-GTAAGAAGTAAAAGAGATAATGGCTTTCGAGTGCATGTTT--TTCCTGGAATTGGAAG----GAATTTTAACA-AAGGAGCCCTTCACAATGAAACCCCCCCACACCCCTGCTTTTCACCTGAAGTAGGACAAGATCGTCGCCCCCACCATCATTCTCCACGTGACCCCAGGTGGGGATGGGTAGTGGACACTACTGATAAGCTCTTAGCAATTTCCCTATTTGTGGACTCTGAAGCTCCTTAGCTTGACAACTGATGCATAAGTTTTCTTTTGTGGGATAAGAATAGGAGAATAGGTGACCTTTTCCCCCTGAATTCCCATCCTGGGGCCAG-----GGAAGAGAGCCCAGGATCCCTTCTCTTG-GCCTTCACACTGTGGGA-AAGAGTACCTAGAGTTAAAAGCCTGATAAATGCCCTCGAACAGCTTTGAAAa s mm7.chr1 9825325 460 - 194923535 tctctgtctctctctccccctcccctccccctcactctaccctcccctcctcccttctctttctcAAAAATCTGCTACTTAAAAAGAAAACTACATGATTCTTTTGGAGTGTCTGTGTAGTCACTGGGATTAGAACCTTCTAACTTTAGCAGAAGAAGTCCCTTAGAGTGACACCCCCC-------------TTCACCTGGGGT----------------CCCTGTC-----CCTCCACAGGGCCTAAGACTAGGGTGGGTATTG-------CTGGCAAGCTCTTAGCAGCCCCTCTATTTGTACATGCTAAAACTTCTTTTCTTGAGAACAGATGAATAAATTTTCTTTTGTGAGATAAGAATGAG--------TGACCTTTTCCCCCTAAATTTCTACTCTTGAGCAAGCAAAAAAAAAAGGGGGGGGGGTCTTTTCCTCTGTGCCTTTGTAACATGGGGGAAAAGTGCCTAAAGTCA------TGAGGAATTCCCTGTAACTGCTTTGAAAA a score=9042 s hg17.chr15_random 279929 223 + 784346 TCACTCGGCGTGAGCGCTTGCCCCCTGAACAAATGTCCAAGT-GTATCACTATGGGAATGCCTCT---------TGGGTCACAGACACAGAGGTAATTCTCTTTGTAAATAGATTCATGTCATTTGTCTCGTTTCTGAACAGTTTCAAAAGAATTATTTGGTGAAGTCAGTTTCCTAGGAGAATCCATCA----CATTTCCCCAGAGGTATTTCCACCCTTGCAAACCATTAGATAA s mm7.chr1 9825785 232 - 194923535 TCACTCGGGCTGTGTTTCTGCAACCTGAACAGATACAGAAGTTGCACCACAGTGGGACTGCCTTCCCCCATCTCTGAG---CAGACACAGATGTGACTCCCTTTGTAAATGTCTTCACACTGCTTGTCCTACTCCTGAGTGGTTTCCACAGATTTATCTGGTGAACTCAGTTTCCTAGGAGAACGTATCACGTGCACTCGCCTAGAG--AGTTCCATCCTTGCAAACCATTAGGTAA a score=9918 s hg17.chr15_random 280459 521 + 784346 ACGTAAAGAACAAATTAGTCCTCGTGGTAGGCCACCCCCAC-CCCATCTCCAGTTCACCACTTCAATCATACGACTTTCTCAGTGGACTTGAAGCCAAGCTTTCACATCAGAGCC---CTCCAACCA--AGAGCCTGACTGTATAACTCCTAAGAACAATCAAGTAAGAATGTTTTTCTTTCCATTCCTCACATCTGGTATCTGTTGCCTTGTGAATAGGGTGCCCATCAGCAGGAAGGGTTAGAACTAGGGTAAGTGTGTAGGGAGCAAGGCTTGAAAAGAAACAGATGAGGAAAGAGTAGCAAAATCAAGACTGTCCCAGGAAGTGAGTGTCAGTCAAAGGTTTTGAAATCCCTCAAATAGTTACTTCTGCTGTCTTGGTTTTGTCCACCTCCCTTCTTTTTTCACATACCTGCCACCCTAAAAAGTAATACCTATGCCTAACATAGAGCTAACCAGTTAAAGAACTGCTAGTAACTTTAGAAAAGAGTCCCTTTCCCATCAGAATCAGAACAAAATCTTTTTAA s mm7.chr1 9826017 432 - 194923535 ACTTAAAGAACAAATTAGAGCCCGGAGT---CTGCTCCCACGCCCATCTCCTGTGAGCTACTCCCACCATGGGATTTTCTCAATGGAGTCTAAGCCAGGCTTTCTAAGCAAAGCCTCGCTCCCACCACCAAGGCCTGGGTGTGTACTTCATAAGCACAATCCACAACGA---TTTGTTTGTCAGTTTCTCACATCTGGGG---GCTACATTGCGAATGTTG-AAGCACCAGCGGGAAGGGTGAGTGTCAGGATAAATCCATGAGG---------------------GATGGGAACTGAGAAGCGAG-------------CAGGAGGGGAGTGCCAGGCAAGGG----------------------------------TTGGCCATCGCTACATAACTTCT-------CATCTCTGCCGCTCTAGAAATACTGAACTGTGCTTAGC--------CATTGGCTATGCAAGCGCTGGTAGCTTTAGCCA--AGTCCGCTACTCATCAGGATCAGAGAAAATTCTCTTTga a score=5662 s hg17.chr15_random 282606 242 + 784346 GGGGCTGTGGGCTTGGGCCCGGCAG--CTGCAGGTGCGGGGCTCTTGCCGG-CCGGGCGCTCCTCGGCTCCCGCGCGCCGGGTTCCCGGGCGGTCCCACCGCCACTGCCTGGGCAGGGGAGGAGGCCTggcggcgcgggcgggcggcgccTTCCCGGGACGACCAGCGGCTACGACCCATGGCGCCCGGACTCTCGGAGGCCGGGAAGCTCCTGGGGCTGGAGTACCCTGAGCGCCAGAGGCTGG s mm7.chr8 5304299 209 - 127874053 GGGGCAGTGGGCCACCTCCTCGGGGGCCCGCAGGTGCTGGGTGCTGGCAGGACCCCGCGCCGCACATCCCCTGTTCGCCAGGCTCCAGGGTG---CAGCTGCCACCG-------------------------------GTGTGCGAGACCTTG--GGAACGACTCGCAGCGGCGTCCCGCGGCGACCGGGCGCTCAGAAGTATGGAAGCTCCTAGGGCTGGTGCGCCCCGAGCGCGGGAGACTGT a score=12936 s hg17.chr15_random 282848 208 + 784346 CAGCTGCGGTTGGATTTCTC-CGATGTCCGGTGTTATCTCCATGTCTGCCCCTTTCTTCCTGGGGAAGATCATCGATGCCATCTATACCAACCCCACTGTGGACTACAGCGACAACCTGACCCGCCTCTGCCTTGGCCTCAGTGGCGTGTTTCTGTGTGGTGCTGCCGCCAATGCCATTCGTGTCTACCTCATGCAAACTTCAGGTCAG s mm7.chr8 5315738 209 - 127874053 CAGCTGCAGTTGGGTTTCTGGCTGTGTCCAGTGTCATCACCATGTCTGCCCCCTTCTTCCTGGGAAGGATCATTGATGTCATCTATACCAACCCAAGCGAGGGCTATGGCGATAGCTTGACTCGGCTCTGTGCTGTGCTCACCTGTGTGTTCCTGTGCGGCGCTGCTGCCAACGGCATTCGTGTCTACCTCATGCAGTCTTCAGGTCAG a score=12427 s hg17.chr15_random 283056 195 + 784346 CGCGTTGTGAAGAGGCTGAGAACTTC---GTTATTCTCCATTCTGAAGCAGGAGGTTGCTTTCTTTGACAAGGCTGGCACAGGGGAATTGATTAACCGCCTCTCATCGGACACTGCACTCCTGGGGCGCTCAGTGACTGAAAACCTCTCAGATGGGCTCAGGGCCGGGGCCCGGGCTTCTATAGGCATCAGGATGATG s mm7.chr8 5316995 198 - 127874053 AGCATTGTGAACAGGCTGCGCACCTCTCTGTTCTCCTCCATTCTAAGGCAAGAGGTTGCTTTCTTTGACAAGACCCGCACAGGCGAATTAATTAACCGCCTCTCCTCGGATACCGCACTCCTGGGGCGCTCCGTGACTGAGAACCTCTCCGATGGCCTGAGAGCTGGGGCCCAGGCCTCCGTTGGTGTTGGCATGATG a score=8018 s hg17.chr15_random 283251 136 + 784346 TTTTGTGTCTCACCTAATCGGGCCACCTTTGTTGTGAGCGTGGTGCCTCTAGTGTCAATCATTGATGTAATTTATGGACGATATCTACGGAAACTGACCAAAGTCACCCAGGATTCGCTGGCACAAGCCACTCAGG s mm7.chr8 5318777 136 - 127874053 TTTTTTGTGTCACCAAGTCTGGCCACCTTTGTTCTGAGTGTGGTACCGCCCATCTCTGTCCTCGCTGTGATTTATGGGCGATATCTACGGAAACTGTCCAAAGCCACACAGGACTCCTTGGCAGAAGCCACACAGG a score=7350 s hg17.chr15_random 283387 141 + 784346 AGGAACGTATTGGAAATGTTAAGAACTGTTCGAGCTTTTGGGAAAGAAATGACTGAAATAGAAAAATAGGCCAGCAAAGTGGACCATGTGATGTAGTCAGCAAGGAAAGAGGCATTCGCTCAGGCTGGCTTCTTTGGAGAA s mm7.chr8 5320307 140 - 127874053 AGGAGCGGATTGGAAACAT-AAGAACCATCCGAGCTTTTGGGAAGGAGATGACGGAAGTGGAGAAGTACACCGGCCGAGTGGACCAGTTGCTGCAGCTGGCACAGAAGGAGGCCTTGGCACGAGCCGGCTTCTTTGGAGCA a score=9192 s hg17.chr15_random 283528 137 + 784346 CTAGGCTGTCCGGAAACCTGATTGTGCTTTCTGAACCTGTACAAAGGGGGGCTGCTGATGGGCAGTGCCCACATGACCATGGGTGAACTCTCTCCCTTCCT-ATGTATGCTTTCGGGGTTGGAATAAGCATTGGAGGT s mm7.chr8 5321787 137 - 127874053 CTGGGCTCTCAGGAAACCTGATTGTGCTGTCTGT-CCTGTACAAAGGAGGCCTGCTGATGGGCAGTGCCCATATGACAGTGGGCGAGCTCTCTTCCTTCCTCATGTACGCTTTCTGGGTTGGATTGAGCATCGGAGGT a score=6292 s hg17.chr15_random 283665 94 + 784346 CTGAGCTCTTTCTACTCGGAGCTGATGAAAGGACTGGGTGCCGGGGGGCGCCTCTGGGAGCTCCTGGAGAGAGAGCCCAATCTGCCTTTTAAGG s mm7.chr8 5323826 94 - 127874053 CTGAGTTCATTCTACTCCGAGCTGATGAAAGGCCTGGGTGCTGGTGGGCGGCTCTGGGAGCTGCTGGAGAGACAGCCACGGCTGCCTTTTAACG a score=14383 s hg17.chr15_random 283759 216 + 784346 AGGGGGAAGGGTTATCTTAAATGAGAAAAGCTTCCAGGGTGCTTTGGAGTTTAAGAACGTGCATTTTGCCGATCCCGCTTGCCCAGAGGCGCCCATATTTCAGGATTTCAGCCTTTCCATTCCGTCAGGATCTGTCACGGCACTGGTTGGCCCAGGTGGTTCTGGCAAATCAACAGTGCTTTCGCTCCTGCTGAGGTTGTTCGACCCTGCTTCTGG s mm7.chr8 5324705 213 - 127874053 AGAGGGGATGGTG---TTAGATGAGAAAACCTTCCAGGGTGCCCTGGAGTTCAGAAACGTGCACTTCACATACCCTGCTCGCCCAGAGGTGTCCGTATTCCAGGATTTCAGTCTTTCCATCCCATCTGGATCTGTCACAGCGCTGGTTGGCCCAAGTGGTTCTGGGAAATCAACAGTGGTTTCGCTCCTGCTGCGGTTGTACGACCCTAATTCTGG a score=6407 s hg17.chr15_random 283975 80 + 784346 AACTATCAGTCTTGATGGCCATGACATCCGTCAGCTAAACCCAGTGTGGCTGAGATCCAAGATTGGGACAGTGAGACAGG s mm7.chr8 5326624 80 - 127874053 AACAGTCAGCCTTGATGGCCATGACATTCGTCAGCTAAACCCCGTCTGGCTGAGATCCAAGATTGGGACAGTGAGTCAGG a score=9222 s hg17.chr15_random 284055 181 + 784346 AACCCATTTTGTTTTCTTGCTCTATCACTGAGAACATTGCTTATGGTGCTGATGGCCT-TCCTCTGTGACCGCTGAGCAAGTCCAGAGAGTGGCTGAAGTGGCCAATGCAGTGGTCTTGATCCGGAATTTCCCCCAAGGGTTCAACACTGTGGTTGGAGAAAAGGGTGTTCTCCTCTCAGGT s mm7.chr8 5328234 182 - 127874053 AGCCAGTCCTGTTCTCCTGCTCTGTCGCTGAGAACATTGCCTATGGAGCTGACAACCTCTCCTCGGTCACAGCCCAGCAGGTGGAGAGGGCCGCAGAGGTGGCCAACGCCGCTGAGTTCATCCGAAGCTTCCCACAGGGCTTCGACACTGTGGTCGGGGAGAAGGGCATCCTCCTGTCAGGT a score=2938 s hg17.chr15_random 284236 42 + 784346 GGGCAGAAACAGCGGATTGCAATTGCCCGTGCTCTGCTGAAG s mm7.chr8 5331098 42 - 127874053 GGGCAGAAGCAGAGGATTGCAATAGCCAGAGCCCTGCTGAAG a score=20540 s hg17.chr15_random 284309 624 + 784346 CAGTGCGCTGGATGCTGAAAATGAGTACCTTGTTCAAGAAGCTCTAGATCCACTGATGGATGGAAGAACAGCGTTAGTTATTGCCCATCATCTCTCCACCATTAAGAATGCTAATATGGTTGCTGTTCTTGACCAAGGAAAAATTACTGAATATGGAAAACATGAAGAGCTGCTTTCAAAACCAAATGGGATATACAGAAAACTAATGAACAAGCAAAGTTTTATTTCAGCCTAAGGA----AACAATTACTGGTA-----------------------------------------------------------------------------------------AACAACA-------------TGAGAGACTTTAATGCAAAACAGTATTGTAGAAAAAAAAAACACCTCAGAGACTGCATGAAATATGTAAACCATATATCAAGTTATTTGAAAAATAGCTATTTTTTCCAAAGCGTGTAAAATATTGCTTTGAAATGTACCTGTTCT-CAAGATCTTTTTATTCAGAGTTTTAACCATTGTAACTTTTTAAATGTCTGTAGCACTGAAGTTATTTTCAGGTTTT-GTATTTTCTTTCATTGTGGAATATTTTAATTAATATAGCATGGCACCTCATTTTCTTTTGCCTGCTGTTAAAGATGGAAGCTGTTGTCAAATGACAACTTTAAAAAGGGAAGTATAAATAAAAAGCCTGATTATTTTAGGCCA s mm7.chr8 5332334 695 - 127874053 CAGTGCACTGGATGCCGAAAATGAGCACCTGGTCCAGGAGGCCCTTGACCGGCTGATGGAAGGGAGAACCGTGCTGATCATAGCCCACCGCCTGTCCACCATTAAGAATGCCAACTTTGTTGCTGTCCTTGACCACGGAAAGATCTGTGAACACGGGACACATGAAGAGCTGCTCCTGAAGCCCAATGGGCTTTACAGAAAACTGATGAACAAGCAGAGTTTCCTGTCATATAATGGAGCAGAGCAGTTCCTGGAACCTGCACGGGCGTAGCCTGCAGTGCAGGTATTGGGTAACTGAAGCAGGGCTGTGACTCTATCATATACCCTGTCCACAGACAGAAACAGAGCAGCAGCTACCCGTGGGCTGAGAGACCTTAAAACCAAACAGCATTGCAGAGAACAGGG----CCTGGAGGCCGTGTGAAGCCTGGGAG-CATACTTC-AGTTATTTGAAATAT-GCCTCTTTCCACAAAGAGTGCACAATGTCATTTTACGATGTACCTGTCCTCCCAGACCTTTCTTC----AGTTGTAA-AATCGTAGCTCTCTAAATGTCTAAAGCGCTGAAGTGACTGCAGGGTTCCAGTGTTTGC----------------------TAGCCAAGCAGAACACCTCA-CTTCCTGTGTGTGCTGTCAGAGTCG--AGTTGTTCTCAGGTGACAACTTTAAAAAGGGAATTAGAAACTAAAGGCCTAACTAATTTAAGCCA a score=8681 s hg17.chr15_random 285082 462 + 784346 AGGGAACATTTATATTGCCCGT-CTCCTGTGTCTTCAAAGGTGTGAGAGTTGAGGAATATGTGTTCCTACGGGAACTATGTTTG--AATATGTGCAGTTTTCAACATTTTGGCAAATGAAAGCCTGACAAGTTTTTAAAAGGGCAGAAGCTTTATTTTTTGAACAGAAAAA--TCTATTTTTTAAATTCACATGTTTGT---ATGAGTACTTCTGGGAAGCAAGGGATGAACTGCTAGGTATTATTAA-------GAACGAATGATTTTTGCATTTAAGTTGTTTGAAGGCATGTATTTTG-----AAAAATATCTGTTACAAATTTATAATTTCAAGACATACTA-AATCTTATAATACTTTTGGAATTTCATTAATAAGGCTAAAATCTGAGGAATGTAACTAATTTTCAGCCTTAAGACACTTAAGTTTGGAAGTCCTT------GCTATTCAACAGAATAACAAGAAACCTTCAGAATGTATCAC s mm7.chr8 5333054 452 - 127874053 AGGGAAAGTTTGACGCGTCCATCCTCCATTACCTTC--TGGCGTCAGAGTTCTGGAGCA-------CTACAGG-GCTGTACCTGTCCAAATGTGCAGTGCTCACCATCTGAGC--ACCAGAGTCTGATACATTTTGCCAAAGGAAGAAGTCCCGTTCTGTAAACTGGAAAGCTTCTATTTTTTTA--TTACCTCCTTGTTTAATGACTCTTTTTGAGAAGCAAGGTACAGATAACCAGGCGTTATCAACAGAGGTGGATGAAAATCCATGGCGCATCTGTTG-----AAGCATGTATTTTGAAAAAAAAAATACCCATTTTAAATATGTGATTCCCAGGTATATTGTAGttttata----ttttaaatttttattaataaGGCT-GAATCTGAATAATA----TAATTTTCAGC---------CTTGAGTATGATGACTCTTGCAGAGGCAAGGCATCAGAAGGAACATCAGCCTTTGGAAAGTATCAC a score=2944 s hg17.chr15_random 285587 186 + 784346 TGGTTATAGTTTTTT---TATAGTCTCAAAATTCCTAAAGCAATGCTGACAGCCATTGAAT------TTGCCATATTTTGTAT---------TCAGTGCTGTTAATGTGCTGTTGCCTCAAGAAAAAGTG----------CTTTTTCTCCATTGATGAGGCTAGACCCTAAGAGGTAATTAAG-TCAATGTAAATCAAATGGA-AGTTTTGCCATG s mm7.chr8 5333954 211 - 127874053 TGCTTATGGTTTGTCACCTACAGTGTCACAGCTCTTACAGCAGTGACAGTGGCTAATGAATATGAATTTGCTCTTTTTTTTTTCCTTTGGTATCAGTGCTGTTAACTGGATGTTGC----GGAGGAAGTGGGTTTTTTGTTTGTTTTTTTGCTGGTGATG-TAGAGCCTGAGACACAGCTACGCTGAGAGGTAGTTAAATGGACACACCTGCCGTG a score=3866 s hg17.chr15_random 285874 281 + 784346 AATTGATATGAG------CGAATGAATGTAGTATTTTTTGAATTAGTAAACAGTACATCTGTGACAATCATTTT-----AACAAGCTCTACTTGTGTTCTTTATAAAGTGTGATTTTCAGAAAGCAAACAAAACACAATTAAAAGGTTGAATCTGAGGAAAATAATGCTTGTACCATAGAAGTATTTACAAAATTGCATTTCATTGTTATGTTTTATTTTCTGATACCTGATGTTCAATTATATCTGTAGGTAATATTTTATATCATAGATTAAAATTTATAGTGACCTTAA s mm7.chr8 5334215 239 - 127874053 AATGAGCATGAGGCCCCATGGATGTGTGTGCAGGTCTTGGGGTGAGTAGGCAGCACACCTGTGACGGTCACCTTCCACTGTCCACATCTGCTCA-GCTCCTTGCAGGGTGT---CCTCAGAAC-----------------------TCGGAGTTGTTGCAGATCAGACTGGTGAGA---AAGCATTATGAAAATTGAATTGAGTCATCACGTTTTCTTTCTTAATA---------------------TGGTTAACATTTTATATCA--GATTAAAATTTATAGTGAACTTAA a score=2233 s hg17.chr15_random 295193 568 + 784346 TAAAGTAAATA----GCtttattgttgtgttgcattatattaatatatattttctagtattaaat---ctttgtatgc--------------caaatcactggggtgggtgatttcttagtaagtgtagaattcagttcctttttctttcagttaagaatattttaactatgtttat--aagggatactgtttagtaattttattctttttgtattcacttcatcaagagttagt------aatagttatatttgc-----tttgtaaaatgaactgaaaggaagccactttttataactttATCCAT-------ATTTCCTAGTTTGGGGTCCATTTTACAAGATGTTTTAAACAGATGCTTATTAAAAACACTGGTTA----TAGGGACtttaata---------------------------------------------------------aaaatttttaaaataatGTTTTACATTTCTT------GCAAAAA-----------------------------------------TTG-ATGCCTGCAACCTATTTACTGTTTTTAAAATTAAATTAAGATTCATTTAAGCAGTACATGTTTATTTTAGTGAAACACGTATTTAATTTTCTAAGATAGTATTTTTTGTCTTTAAAACAAT-TTCTGCATGTTTTGTTTTTTTTTCACTTTAAATTTTATGTTTTCTCAGTTTTT s mm7.chr14 109936296 659 + 119226840 TGAGGTGAATAATCTGGTTTGCTGTTGGATTGGCTTCTATTAACATATATTTCTTAGTAGTAAATAATCCTTCTATGCTTAACCCCAAATCTCAAATTGTAGGGTTGGAAGATTACTGA-----CATGGATTTAGACTGCTATCTCTTCTAAT-------------ACTAAGTTTATCCAAGAGTTAATGCA----AAACTTGTATTTTGAATATT----------AAAGTTAGCTGGAAAGAAAGTCCTATTCTCATGCTTTTATGATATTGGTT---------TTATTTTTACTACTTTTATTCATTCATAAAATTACCTGATTATGAAGCA--TTTAATAGGTAGCTTAAATAG----TTCTTAAAATTTTTAGCAAGAATTGGTAAGCTTAAAagaattggaaatgtaaatgagctaaatacctaattaaaaatggaaaaaaaaGACAAGGAAAA-----AAAATAAAAATTACCAATACTTTAAGCAGCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaTTGTAAGCTTG--ACCCATGGAATAGTATTCAAACCAATTCAAGATTCACTCACCAAAGGCACTCCAATTTTAACACAGCAC--AATCCGTTTTCTTCCCCAGAATCCTCTGTATCAAAGACAATGTTCTTTATGT---GATTTTTTTCCA-TTTAAGTTTCACATGTTCTCACTTTTT a score=9367 s hg17.chr15_random 295980 173 + 784346 aattaaatatGTCCCATCAGTTTAGTCATTTTAATATTCTCACTCATCAGACATTTTTTGGGAACACCATATGCCTTTTCATGCAGTCAGTTTCAAGAAAATGAAAATTACTTTTTATATGTTTATACTCAAAGCTTGGCTAGAGATAAGTCTCCCCTTCCTTAAGTTGGGGA s mm7.chr14 24914003 164 + 119226840 AGTTACAAATGTCCCATCAGTGTAGTCATTTTAATGTTCTCACGCACCAGACGTTTCT-GGGGACACCATATGCCCTTTCATCAACTCGGTCTCAAGAAAATGAAAATTACTTTTTATCTGCTTACA---AAAACTCGGGTACAGAGAAATCTC-----CATTAAGTTAAGGA a score=6071 s hg17.chr15_random 298913 375 + 784346 tttgatgagaagaat------atcaacctgtttttggactatgtttaaaactgccacaCATGACAATTACACACCAGGTagaaggcatttggggacagacttgaaggaaatg-aggaggaatcgtgct-----ctgctgaaacaagagcattccaaag------agagaccacagcttgggc-aaaagccctgagtcggaatcatgtggacttattcttagaacagcatcgaggaagccattatagctggagtagaatgagaagggggaagagtattagtagatggtggcagagaaataaacatgagaagacggatgatggaacgagcaccttgtacgtcattttaaggactttggctgttcctcaaactgacatggga-ccattgaaagatttt s mm7.chr14 109939920 376 + 119226840 TTCAATGAAATAAATTGTCAAAGCATCCTACCTCAGGTACCTATTGAAAACTAATACATGTGGAAATTAGGCATCAGGCGAAAAATGATTGGG--CAGATTCATGAGAAACATATGAGAAATCTTGTTGGATGTAGTTTAAA--AGGATAGTACAAAGGGGAAAAGAGAATAGAGCTTGTTTTGGaagtgctgaacaagagtcatgtggcctgattctaaaaatattaccaaggaaggtcaaccaggttgggcacagtgatgagagg--agggtcttagaggatgtcattagagaaagaaacacgaa-------------gaacacaaaccttggaggtcagcatgtggttttagggagcttcccacaatgagatggaaatcactggaaggcttg a score=3597 s hg17.chr15_random 300090 136 + 784346 aagcaaagaagtgatatcatctgaattgcatttctgagatttctctggcacttgtgtaaaaaatagctgaaaggaatcaacggcagaagctgggagaccagttagggagcttttgcaataaccataagaggaaata s mm7.chr14 109940296 130 + 119226840 aaacggagaaatgatttgatgtaaattatgttacaagagcttttt--acaactattctaagaaccgctggagaacatcaatagcagaagctg----acaaatcaggagttcattgtaataatcagaagaagaaatg a score=7608 s hg17.chr15_random 300391 411 + 784346 TTTTGAGATAGTATTAGAATTCTTACTATCTTACTGA--CAATTCTCACTATCTTGTTTTATAACTTGGAACATGattataattatagtat----tgttaaatattttatttttattttataattatactttaaaaatattatt----ttggtaaataatcataaaatatgaaaaataaatCTTTCCATTAACTGAATCAATTGTCCCCTTGCAGGATTTTGGCTTCACAACTTCCTAATCCTTGAAATATTAATTTTGATTATTTTTCTAATATGTACCCATATGTCTTTGAGTAAATTTTTATTGGAAGGACAAATCAGTGC-----TGGATATACAGATGCCATTGCTTCGTACTCAGGTAAAGACA-ACCTGATATTT---------------------------------------------------------------------------------------------ATGATCCTCTTGATCATATTTTTATTCTCTTAAAATCTTTATGTC s mm7.chr14 109940517 511 + 119226840 TTCTAAAATGG-----GGAATCACGCTACTTTTCTATATCAATTTTCA-TAACTTGTTTTATGGCTTGAACATTACTTATTAATGTGACATGGCTTGGTATTTATTTGATTTCCTCCTGCTATTTTTTTTTGCGCAATGCTATTGAAATTAAAAAAAAACCACACAATATGTAAAACTAACTTATTCTGTAACTCAATCAATGGTCTGCTTCCCGGAATTTGGAGTCAGAGTTTCCTAATTCTTAAAATATTCATTTTG-CTATTTATA-AATTTACACACATGTATCTTTGAGGGAA-GTTTATTACCTGGATAAACCAGAGCCATATTTGATAAGCAGATGCCATTCTTTCAAATGCAGTTAAATAAACACATGACATATCATTCCTAATTCTTAAAAAGGCCAAGCATGCACAGTTTATTGAACGAATGTTTGCAGCTATCTGTACTGCACCTTGAAAGTGAGTTGCCCAACATAATATTTTTGATTATGCTCTCACTCTTTTAAAACTTTCATATC a score=12425 s hg17.chr15_random 300802 668 + 784346 TTCTAATAATGTTAACAGAGAAGAAAAAAA-----------GTCTTATCTAAGCCTGACTTTTTATTTTTAAGGAA---------------GTTTTTTTC------------TTTATTTG-------------TAAAATTCAGGAGTTTGGCTAGTTGTTATTTAAATATGGAGAACTCTTCCTTGTTTCTTCCCCCTCCCTGCCTAGAAACTGGTTGGTGCTTTTATTATTCGTACTTCAGTGATAGCTTTGATTATTGTTTCAGATCTCCTTGCCCTTGTGTCTTTCCCCAGTACACAAACTATTCTCGAGGTGGAA-CCTGTGGTCTCTGGCATACCCATCCGCCTTCTTCTCTGTCATTAGTTCATCTCTTCCTTTGCCCTCCAGAGCTCTGATTCAATTGCTGCTTGAACTTTTCAGTGTGTCAGTTTCTTTCTCCACGGATTTCCCTGTGGATGGAAAATCTGCCCTTGCACTTTAGTTTTCATAGAAGCCTCATCTCAGCTATCTCCCATTTTGTGATATGAGCCTCTTTTGTTATTGTAGCCTTCATCTCCTATTTCCTAAATTCCATGTGTTTCTACATACTGTTCATAGACAAATAGTTTAAAGCAATGTTCTATA-GTTTCTTGTGGTTTGAAAGTCATATA-TTTTTAAATACGTTTTCTCCCCCTGAGAATTCAGCAT-ACAGTTTCATTTTTCTTGTACGCAGGATGAT s mm7.chr14 109941207 660 + 119226840 TTCTAATAATGTAAATGGAATAGAAGGAAAATTGAATAAGCATTTTATGTAA---------TTTATTCATAAATAACCAAGCCTCTTCTCTCTCTTCTTCCTACATATTGAATTTGTTTGGCATTTTCTTGATTGGACCTCAGG-GTTTGCCCACTTACTGTCTTCAAGTGGGTCACTGTTTGTTGTTTTATCTCCGACCC--CCGAAGAACTCAGTAGTCCTTTTATTATTC-------------AGTTTTCTTTTCTGTTTTAGAGCTTGCCCTTCCTGTTCCTTTTTGTATTACAACAATTCTTCTTGACTCAGAAGTCTATTCTCCACAG----TCTATCTGCCCTTACCTCTGTCATTATTTTA-CTCTGCTCTCCCCCCTCTGGGCTCCGATTCAATTACTGCCTGAACT------------------TTCCTCTGTGGATTCCTGTGTGGATAGAGGACCTGCTCCTGCAGTTTTGGTCTCCTGTAAAACCAATCTGAGGCATCTTTCACAGTGTCGCCTGGGCCTA-TTTGTCTTTGTAACTTTCATGCCACCTTTGCTAACTGGTATG---TCCTCCATACTTCTCAAAGTTAAATAGTTTAAAGAAATTTTCCAAATATGTCTTCTGATT----AGCCGTGTACTTCTTAAGGTTATTTTCTAT-----AGGCTTTGACATGACACTTTTATTCTCTTTCT--GAAGGGTGAT a score=2782 s hg17.chr15_random 306107 45 + 784346 TTGTTCACGTACCTTTGCCGTTTTCCTTGCTGGGATGACATCCTT s mm7.chr14 109953855 45 + 119226840 TTGTTCACATGTCTTTTCCATTTTCCTTTCAGGGATGTTATCCTT a score=11347 s hg17.chr15_random 306385 473 + 784346 ATTACACTCTTCTGTCAGGCAAACAAGGGTATTTATATGGCTGAAATCTACGGTATTTTTTAAATGTAGTAAAATGTAATGAATAAGCATACAAATGAATGAGTTA------ATTAATCTGTTATATTCTTGGTTAAGTAAtgagcattatgaggacaaaaattgagtcttacaccttcttataatcctaaagacctagtacaggacttggaatatagcattcacttaagacatctttgtgactaatgaatttaaatatttttattaattCTAAGTTGACGTATG--ATTGTAATTTGGGGAAGGTAGTGAAATTTCAAATGGCTTTCACCACCTGTGAAATGACCCTTTTTACCTA-----CCACATGATTTACCAGATCTTTGTTTAGGTGAACCTAGGCGAAAGCAGATTGT--------TTCCTCTACTTAGGAAATACTTCGCACATTTTCGTTGC-TTATAAATTTGATGATTTTAATTTGTACAGTTA s mm7.chr14 109953944 444 + 119226840 ATCACAGTATACTGTCCAGAAAACAAGTGCAGGTATATGTCAGGATTCT-TGGTAACTTTGAAATGTGGTAAAATGTACTGAATGAATGCATCAATGAATGACTTAATTGGCATTGACATTCTTTATTCCAAGGTTGGTAAGGAGCATTGTGAGAAAAAGA-------CTTACACCTCC----AAGTCTA-----TTGGCACAGAGTATTGAATAGAGTA-GCACTTGAAACGTTTTGGGGACTGATGCATTTAAATATTTTCATGAAG--TAAGTTGATGTATATTACTCTCATTTGGGGAGGTTAGCAGGTACTCAACTACCATCTACTGACTGTGAAATCATCC-CATTACTAATGTGTCCATATTACTT------------------------------GAAGTAGATTATTTCCTATATTCCTATATTTACAAAAGATTTTGTGGATTTTTGTTTCATTGTAAACTTAACAATTTTGACTTGTGTATCTA a score=17799 s hg17.chr15_random 308739 576 + 784346 TGGTGTAT-TCTCTAAAGGAGGAAATTCTGACCTCAACTATGTTCAGATAGCTGTGGCAGATAATACT--CTGATCAGGTACTAAGTCATATATCTTTCACATTTCCCTTTGCTAGTTATACTCAGCATGTGGTTGGAAATGGAATCAAAGCCCAGTCTGGAAATCCTGAAGTCAAAGTCAAAGGAACTGATCCTGTGATAAATCAGATTATTGATAAACTGAAGCATGTTATTCAGGTAAGTCCTGATCCTAT--------------------------ATTTTT-TGGTATAGCCAATAATAAATAATAAGTGGTCACTTTCTGTTATACTTGATAAATTTGTTAACCCTATCAGGTAATCCTGCCTAA----AATATTGTAACACATTATTTGTATCAGGACTTTTGGGAATATTTAGTTTAATGATTTTTGTATGCAGTCAATATGCAGTGGTATTTTAATGTTGGACAATCTGTATATGTGAAAAGCAAGCCTCAGCCTCAG-CATTTCAATAATGAGAATCTCAGGACATGCATTGTCTTCAGTGAATAAGTT-TGAACGTGGGAATCACTGTGACCATTAAAGAAAACACATAGAAGACCATAGA s mm7.chr14 109954610 599 + 119226840 TGGTGTCTGTTCCCAGAGAATGAAATTCTGAAGCCAG--GTGTCTCGGGGACTCTGA-AGATGCTCCTGACTGGTCACTCTCCAAATCATGACTCTTTCC--TTTCACTCCATTAGCTATGCTCAGCGTGTGGTTGGGAATGGAATCAAAGCCCAGTCTGCAAATCCTGAAGTCAGAGTCAGAGGAACCGATCCTGTGGTAAATCAGATCATTGATAAACTGAAGCATGTCATCCAGGTAAGCACAGTTTTTATTACATTTATTTTATCTTGCTGAATTGATTTTTATTTTATTATCAGCTTTCAATGGTATGCGAATGCTTTCTAATATATTTGATTTCTTTGCTAAGCATATTTTAT-ATCCTACTTAAATTGAATTTTGGAGTACTTTCTTTATATCTCTTGTTCCAGAAATACTTTGTAGAGTCATCACCATTTAAACTCAGT-TCTAATGATAT-----GGGTGGAGAGTGTGCATCTGTGACAAGCAGGTCTTCACCTCTTCCATTTCAGTAGTTAATCTTTTAGGATACAT-TTATCTTCAGCGAAGAAGTTGTAAGTCCAGGGACAACTGTGATCACTAAAGAAAACATATATTGGACCACAAA a score=2866 s hg17.chr15_random 309749 224 + 784346 TAAGCAGAACTTTGCATGGCTAGTTGATGCTTATTTCTAGTATCGTGCATCAGAAACAATACCTAAATAGTACAGAGTTTTTATTGCATACAACATATTCCAGAGTCAGTAGTAGGCTTCTCATAATTGTTCTGCAAAGACAAAGCTTAAGTTTATGCAGAGCCAATTCCTGGGTTTCCATTTTTCACGAGTCCCTATCTCTCAAGGAGAGGATATGTAAGAAG s mm7.chr14 109955218 194 + 119226840 TAATCAGAGGTTGATGTAGATCATTGAT---CACTTTCAATAAGATACTACAGAAA----ATCTAAATAGCTCTGAATTGTATTTGCATGTGAGGTATATCTGAGTGACTTGTATGGCTGTCATCAT-------------------TTAGGTTT-TTCAGAGAGAGTTATTTGAACTCAG---TTCATGAGCTCTTAAATCCCAATGAAAGTCTGTGTGAGGGG a score=13083 s hg17.chr15_random 310629 473 + 784346 TAAGAAAACACATTCACAGAGGAACACATAGATACCCAAGATAGAAAGGATTATAAAAACCCTTAGGAGGAGGGCTCATATATTTATTACCCATTCAGCAACCCCCCTCCCCATTTCTTGTTTCGTAGGTTTCAAAGCC------TTTTCAAGGTGGCAGAGGGAAGTCATCCTGCCTTTCTTTTTTAGCTTCTGTGTGAACTTGAGTCCCATTCTTTATTCTTTATAGGAGTGTGCAGATCTCCAATTATTCATGCTTAAGTTTCATTCTGGGGTTGCAAGAGAATATCAAATGCAGTGCTACCTTTGAGGTCTATCATTTTAAGATCTGCTAGATTTATATGATAGAAATGTAGATTTTTATAGAGGACAGCAGAAAGTCATATCTTGCACAGGTGTCACTGAAA-ATTTACCTTTAATATCTAAGAATATGCTCTTTCATGAACTG-CTCTCCTGGAGATGAAGAGAAGTGTTTTACT s mm7.chr14 109960437 457 + 119226840 TAAGAGGGTACA--CACAAAGGAAGGGGTAGGCCTCCAATCT--------TTGTAAAAGCCCTGTGGAGAATGAATTACTGATCTGTTGCTC-TGTAGCA-TAACATGGCTAAATCCTTGTTACAAAGATATCAAAGCCACACTCTTTTCAAGTTT-TGCAGGGAAATGGTCTTAGCTTT-----TAAGCTTCTGCTTAGA-TTGCACCCTATTCTTTCATCTTTAT--GAGTGTGTAGATTTCAAAATATTCAGTCTTCAATTTCATTATAGAATTATATGAAAGTATCAAATATA-TACTGCCTTTGAGGTCTG--AATTTCAATTCTGTTGAGATGATATGGCTGAAAATTAGATGTTTGTAAAAGATCACAGAAAGTCATATCCTGAACAGGTGTCACTGAAACATCAACTTTTTGTGCCTTATAATATACTGCTTCCTAGGCTGACTTTTCTGCAAATGATGAAAAAGGTTTTATT a score=4723 s hg17.chr15_random 311435 308 + 784346 TTTGCCAAACTTTTGACTACTGATGGTGTACGCGTGCCCTGGCAGGGATGGCCATTGTGCTGT-CAGTATCAAGGGATGGCTAACAGCACCCACCACAATGTCAGCTATGAAAG-GATTCAGAAA-ATAGCCTTCTGTAAGTCAGAATTTATTAATTAAGGAGTA----GGGCCATG-GAAGATGTCAACATAGGAATAGGTTTCAGATTCTAAACTGTAGATTTAGATGATCACTTCTTAGTGTTTGtataaaatttactttattttttattataaCATGAAGTTCGCT----TTCCACCTTTATACTATGA-AAAATGC s mm7.chr14 109960894 305 + 119226840 TCTGCCTGACTTCTGACCCCTAGTAATATGTTTATGCCCAGCAAGG--TGGCTGGTGTCATATGCAACAGCAAAGGACAGTTAACAGTAT---CCCTGGTGTCATCTGTGAAAACGGTTCGGAAAGGTTATCTTCTG-GTGTGAGAATTCATTACACAGGGAGTCATGTGGGTTAAGTGAGGGCACGGAAATTTGGACATATTTCACAGCCCATTCCATAGACTTCAACGACCA---AGTAGTATGTATACAAAAGTTG------TTTTCATTATAATG-GATGTTAGCTACACCTGTAACTGTGCACTATGGCAAAATGC a score=5293 s hg17.chr15_random 311792 596 + 784346 CAGCCACAA---TAGCAAACATTGCCTGCATGGACTCACCCAAAAATGCCT----TTCTCGGCCTGCCATTGATCTG-AACCTCATTTCTACCTTGCATTGTCTGCAATTAGAGTCACTAAGGAAGTAGA--TAAAGATTTTTACTTGGAAAATGTCAC-TTTTTAATGTTTTAATAATTAattcgttcaagatactcaacaaatgctcactgagtttctagtacggtcctggttctgtacaggcactgaggttaaagttgtgaataaagcagacacaaccctgctctcatgggctttccattgtaagaaaaaagtaaataaacaaaccaatgaaaccagtattgtagctgacacatgttatgcacaaaaccaaacaaggtgaggtaaggaaagatatttaagaagagtgtgctggtgaaggccactcaggggcagatgtttgggttgatgctgaataaggagaagaaaggagtcatgggaaaacctgtgagaactgtgtctggggcagaaggcaaagtaggtgtaaaggccctgtggcaggaataagtttattttattcagagaacagaaggccaggtggctaaaacagagtgagt------taaagggagg s mm7.chr14 109961271 507 + 119226840 CAGCAAAAATATTAGTAATAATTACTTCCATATGTTATTTCTGAAACACCTGTGGTTTTTGGCTTGC--TTGGGCTGTGACCTCATTT-TCTCTGACTTT---TGCAATT--AATCACTAAGCAAGTGGGTCTACGAGGTTTTATATTGAAATGCCCACATTTTCAATCTTTCTACCGTTATTTTATTAAAAGCACTTGGCATATTGCTTTTAACTTCATAGGTTTATGGTAGATTTACACA---ACAGTGATC-----------CAAAGTAGACAC--TTCTACTCTCAGTGGGTTTGCACTCTGAGAAAAAATTGTAAATTCAGAGCAAGCATAGCA-----ATTGCCGACAAGGATTA--CAAAGAAACAAAGAAGAC----TGACAAGAGA-ACTTAGGATGAGTGTGCTGTTGC--------------------------------CTGA--------AAGACAGGAATCA--GGAAAATTGGTGAGAAC----TCTGGGGTGAAAGG-----------------------ACTGAGAGAAAGTTTATCATCTTCA-AGGGCAGAAATCCACAAGGCTGTAGCAGGGTGAACGGACAGTAGAGGAAGG a score=12164 s hg17.chr15_random 314068 307 + 784346 ATCAAGTATAACAGAAAGTGACCACTTATTATTTATTATTGGCTATACCA-AAAAAT--------------------------ATAGGATCAGGACTTACCTGAATAACATGCTTCAGTTTATCAATAATCTGATTTATCACAGGATCAGTTCCTTTGACTTTGACTTCAGGATTTCCAGACTGGGCTTTGATTCCATTTCCAACCACATGCTGAGTATAACTAGCAAAGGGAAATGTGAAAGATATATGACTTAGTACCTGATCAG--AGTATTATCTGCCACAGCTATCTGAACATAGTTGAGGTCAGAATTTCCTCCTTTAGAGA-ATACACCA s mm7.chr14 9271898 332 - 119226840 ATCAAATATATTAGAAAGCATTCGCATACCATTGAAAGCTGATAATAAAATAAAAATCAATTCAGCAAGATAAAATAAATGTAATAAAAACTGTGCTTACCTGGATGACATGCTTCAGTTTATCAATGATCTGATTTACCACAGGATCGGTTCCTCTGACTCTGACTTCAGGATTTGCAGACTGGGCTTTGATTCCATTCCCAACCACACGCTGAGCATAGCTAATGGAGTGAAA--GGAAAGAGTCATGATTTGGAGAGTGACCAGTCAGGAGCATCT-TCAGAGTCCCCGAGACAC--CTGGCTTCAGAATTTCATTCTCTGGGAACAGACACCA a score=11347 s hg17.chr15_random 315700 473 + 784346 TAACTGTACAAATTAAAATCATCAAATTTATAA-GCAACGAAAATGTGCGAAGTATTTCCTAAGTAGAGGAA--------ACAATCTGCTTTCGCCTAGGTTCACCTAAACAAAGATCTGGTAAATCATGTGG-----TAGGTAAAAAGGGTCATTTCACAGGTGGTGAAAGCCATTTGAAATTTCACTACCTTCCCCAAATTACAAT--CATACGTCAACTTAGaattaataaaaatatttaaattcattagtcacaaagatgtcttaagtgaatgctatattccaagtcctgtactaggtctttaggattataagaaggtgtaagactcaatttttgtcctcataatgctcaTTACTTAACCAAGAATATAACAGATTAAT------TAACTCATTCATTTGTATGCTTATTCATTACATTTTACTACATTTAAAAAATACCGTAGATTTCAGCCATATAAATACCCTTGTTTGCCTGACAGAAGAGTGTAAT s mm7.chr14 9272452 444 - 119226840 TAGATACACAAGTCAAAATTGTTAAGTTTACAATGAAACAAAAATCCACAAAATCTTTTGTAAATATAGGAATATAGGAAATAATCTACTTC------------------------------AAGTAATATGGACACATTAGTAATG-GGATGATTTCACAGTCAGTAGATGGTAGTTGAGTACCTGCTAACCTCCCCAAATGAGAGTAATATACATCAACTTA--CTTCATGAAAATATTTAAATGCATCAGTCCCCAAAACGTTTCAAGTGC-TACTCTATTCAATACTCTGTGCCAA-----TAGACTT----GGAGGTGTAAG-------TCTTTTTCTCACAATGCTCCTTACCAACCTTGGAATAAAGAATGTCAATGCCAATTAAGTCATTCATTGATGCATTCATTCAGTACATTTTACCACATTTCAAAGTTACCA-AGAATCCTGACATATACCTGCACTTGTTTTCTGGACAGTATACTGTGAT a score=2782 s hg17.chr15_random 316406 45 + 784346 AAGGATGTCATCCCAGCAAGGAAAACGGCAAAGGTACGTGAACAA s mm7.chr14 9272940 45 - 119226840 AAGGATAACATCCCTGAAAGGAAAATGGAAAAGACATGTGAACAA a score=11402 s hg17.chr15_random 319955 628 + 784346 acaaTCCTGAACAAATGGTTGCACATAACCAGCTAAACAGTAATATAACAGTTGTTGGCAGGGTGAGAAGAAACTAGCAGACTGTAGGTTTGTCATACTGTTTTTTTGTTTCTCCAGAAACACAGATATAATATAGGCAATGAAAGCTGAGACTCATCTCTTAATTTCAGTTAAGCTATTAATTGATTTACATC---ATTTACTTACAGGTCAGAAAAGTTTCTTTCAAAAGGCAGGAATGTTGTTTCATGTTAATCTAAGGACTTGCTTACCTTTTGTTTCTGTTCTTAATGATCACAGTTACTAATACAGTTAAATAAT-------ATTTAGATAAAATACATTACAATTATAGCTGATCAAAAATCTCATTCCAAGCTGTTATATTGTTGA-----CTATCTCATGATCACTCTTCTTATGAATCATGTAAATAGGGAAAAATACTGCAAA-----GTAGACCCACGTTACTTCAAATGAAATATGATTTAATAAAATCAG-TTATTCTTTGCCAATTTTGTAATGTTCAAAATaaccacaattgaaatagtgatacatacacatcagaacagttcaaatgaaagagagaaatgataccaagtgttggcaaagatgcggagcaactagaactctctcccattgtgg s mm7.chr14 9273414 587 - 119226840 ACAATTCTCAGTAAACA-TTCAGGATTGTCAGCTAAACAGAGAAATAGCAGCCATCGCTGGA---AGAACAA-------------------TTTATACAATTTCTT-------CTAACAACACAGCCACAGTTAAAGTAATAGAAAGCAATGCTCA-CACACAACTTCAATGAAGCTATTAATTTGCTCTAATTCCTATTCATCCACAGACCAGGGAGA---ATGTTAACCAGTAGTAAGAGTGCTTGGTATTAACCTGGGGAACTTCTTGCTTTTTGATGTT----TTGATTATCACAGTTTATGATACTGTTGATTAATTGAATAAACCCAGGTAAAATTTATCAGAATTATGACTGATGAGGAATCACAATTCA-GCTCCTTTACtattaaatattttattttatttttaCTCCTCTTA-----CTTGTATA----GTAAAACattataaattttagtaaa--------aattaaaatgaaatatgatttattGAAAGCAGGTTCTTCCTTG--ATTTGTATGAGAAACAACAGTACGACA--TAAGAGCCTAATGTTTAtac--tacaatggttcaagtgaaaaagattggtggtatctggtgttggtaagaacacagggtgactagaactctcttccactgtag a score=2156 s hg17.chr15_random 320730 199 + 784346 tgaaCTtatatttgtataatgatatagtatatagcaatgag----aacctaacaaattacaactatatgcaaaaagattaacaaatcttataaactaaatattgaatgaaagaagcaagatacagaacatattctacgatctaattcactaaaaattgtaaaactcatcag--------ttatgtt-------ccaaatcaccataagagctatccta s mm7.chr14 9274090 201 - 119226840 TGAGATAATATT-----AACGGTACAA-AGAAAACAGTGGGGTGAAATTAAATAAAATACAACTACAT-TAAAAAGACTGAGAAGTTACCCAGCCTAAA----------ATAAAGGATGACGCAGGATGTACTTTATAATTTATTATATTTTGAAGAGCAAACACCTTCAAAATATTCATTGTATTTTCAAGACTAAGTCACCTTCAAAGACATCCAA a score=1538 s hg17.chr15_random 320938 132 + 784346 gtctagaagaagtaataatataaaatttcctgatttgagtactggataca-cagaagggctaagtttgtttaaaaacaaaagaagtattgagctgtacagttaagatttgggtattttactgt---ttgtatgtat s mm7.chr14 9274814 125 - 119226840 gCCTTAGAGGGGAACAACTGTTGACATTCTTGACTTGGTT--TTAATAAATCAAGAGTGCTTA------TTACAATAAAAAG--GTATTGAATTA-AAAGGTGAGATTTGGGCACCCTACTATAAGTTATACATAT a score=7463 s hg17.chr15_random 321170 320 + 784346 ACCCACACAGGT--ATTTTTAACAT--------------------GGATGAAGTGGTTCTGCCATCATTAAATGAGTACTTTAGGATGCAAGTCTGATATAAAAACTTACTTCCCTGAAGACTTTAATTTTGCATGCAAAATACACGGTTTCTAAATTAAATTT--TTTTGTAACAAAGCGTTTTTGAGTTCCCCTCATGAAATTTTAATAAATCATTAATTTCTTCTTTTTCTCTTT-CATGCACAAGCAGTGGATAAACATTTCAAAGATCCCTACAGAAGTTTCTTCCCTTGAAATACTGTTCACATGACAATGAGAAGGATGGAATAAAACACAAAAAAGG s mm7.chr14 9275174 329 - 119226840 ACACACACAGTTTCACTTCTAACATCCTGCCATAGATTCGTGGCAAGAAGAAATAGTTCCATCATCACTAAACAAATGATTGAGGATTCCAGTTTGATTTTAAAACCT--TCCCCCATAGAC---AAATTTAGATGCACAA-ATACGATTTCTAAATTAAATAAAACTTTCTAACAAA-TGTGTCTAATTTAATTT--TGAAATTTCTATAGGTTGTT---TTTTTCTTCTTCTCTCTGAATGTAACAGTAATGAGAACACACTTCAAGAATTCCCATGGAAGTA-ATTAATATGAAAAAATG---ACATTTCATTAAGAAGAAGAGAACAAGGCACAAAAACAG a score=32957 s hg17.chr15_random 321803 1471 + 784346 TTTTTCGTTGGGGAAGTAGTAGACCAACCATCTGTGCTTATTTCTTCTAAACAGAGCTGGGAATGAGTGACAGCAGTTGAACAGGAACACTTGCTCCCCAAGCACTACTTGTTTT--TCATGAAG---AAGGAAAAAAGGCAAAAGCCCTGCTACATTTACATTCGCA--------------------------AAATTGTTTTCAAATGAGGATTAACAAGATGTTAGTTCCCTCTCTGTT------------------------GAACACATAAA---ATAT---------------TAAAAGGCA--------GTGCTAATACATCTATATACAGCACATCAGGAGGAAGGAGGAAGTCATTTCTCCTGACTTTACCAACTTGTCTTATTTGAAACTGATACCGTGCCCTATTGGCTGATAGGAGTTTCACTTTATTTAGAATACAATAGAATTTGGCTCAGATTCACACCAAAAGTATAGTATTTTGATGTGCACTTACACGATTTCAGGGGAAAACAATATCTGGAATGTGACCCTGGAATTCATTACAAGTCAGCTAAAGGGATCTCTCTTAGAATTTTTTCATAATTGGACTGGGACAGGATGTAAGAATAAATCATTAACAGTAG------ATGAGGAAAACACTTGACGAGAGCTTTCTCGTCTTACCATTACTGCTCTTTCTATCAGAGGTTAAAGACAGAATGGGGACCATGT-TGTGGTTGTTATTCTTGTTGTTTGATTGGTTTGTTTATTATGTTCTTGCAGGACTTGGTTATGTGGCTGGATATGAAAATTCTTTCCATTTCCAGAGTCATACATCTCCTAATTTCTAGGAGATTAAATACTGGTTTTATCTTTGGCTCCAGTAAAAATGTTGCTATCT-------TGGATTAAAAGA-AGGTTGGGAAATACGTTGTGTCTATTCACCAGTGAATGGGAACCCCTTCTACAACAACAAATTTTCCATT-CAAACCATTTCTAGGC------CTCCCTTCCTGGTTCTGATAGCAAATGTGAAAGCAAGTACTAGAGATTTGGGTTTTGTAAGTTTCCTCAAATACTTGGGAAATACTGGATTCCGTTGCCAAGTGTTGCCTTTTGTACATTCAGCTTCTACACAGCACGTTTTCTCTATGTTGAAAGTCCTAATCCTTGAAATCTCAGAATGGAAAAGAGTTATATGACTAATTTTATGTGCCAGGATTATGGGAATAAACTTTCATGGAAGATAGGAAGCTTACAGGGCATCTAGAGAAAGGAGACATCTGTAGAATCAATTCAGAATGATTAAGCCCCTTGTGATCTCACTATCTCACTTCAATTGTTAAGCCACAAAACTCTTTTTAAGTTAATCTCTAACATTTATTTGGCTTTATAATTACATATAAATAATGTCTAAATTTGACACCTATGTTTCCAAACTTAATAATGAAGTCAAAATAAACAGAATTAA-GGAGAGC-----------TTATTACGATCT------------------TTATTGTTATTTATATATAACAAAT---------------------TTCCTATTAAGAATATAATATTTTATGATATCTTATGGATGTCATTAACATTGCTTT s mm7.chr14 9275509 1546 - 119226840 TTTTTAAATATAGAAATAAAAGCCCCACCACATGTGCTGATTTCCTCTCAGCAGGAGTGGTAATGGATGCTAACAAT-ATATTGGAATATTCACTTG--AAGGATGACTTGTTCTCATCATAAAGGACAAAGACAAATACCAGACACCTCCAAacacacacacacacacacacacacacacacacacacacCCCAAAAGACT---AAATAATGATTAACAAGATTTCAGT--CCTCTCTGTTCTAGATataaatgaataaataaatgaataaataaataaatataaatgaataaataaataaatGGCATAAATGAAATGCCAACAAGTCTATGTGCAGCGCATCACTAGGAAATAGTAACTTGATGG--CTGACTTGACTGGCAATGCCTACTTGAAACTACTGTCATAACCTATTGACTGGCAGA---TTCTGATTTTGTAGAATGCAATATAATTTGATGCAGATTCATTCCAGAATTATAATATTTTGATATATAGTTACACAGTTTCACATGAGAA----GTCCAGAATCTGACTCTGAGAT------AAAAACAAC-AAAAGTATCAAGCACAGATGTTTTCCCCAGGCCCACTGGTACAGGATGCAAGGCAGCAT-------GGTGGTTCCCAATGAGCAAGGCAAGGGATCAGATGTTTCTC--TTTACCAAAACTGC------------AGTTAAAAATCAAAAGAGGAAATACAAATGCTGCTACTATTCTCGTTGTTT-----------TCACTAAAAT-TTGTATGACT-GATTTTGTAGATTTATACTAAAATTCCTTTCATATCTAGA-TCATGAGTCTCAAAATTGCTATAAGGTAAAATGCTGATTTTATAATTGG-TCTAATAAATGTGTTGCTGTCTGCATATCTGAGTGGAAGCATAGGCTGTAAAGTACACTATAGGCATTTATCAGTGAGT------TTCTTGTAGAAGAACaaattatttttaacaaattatttttaaaCTCTCTCCTGTCTTTCTCTTTCTGGTAGCAAATATGAT-GTAAATAAAATAG-TTTGGTCTGAGTATTTCCCCTTATAATCTTGCATTACACTGAACCACATTTCTGAGTGCTATTTTGTGAATGATCA---TCTATACAACAT-TTTCCTCTACATGGAAAGTTCTAATT-TTAAAACCTCAGAGTAGAAAGAACTCTTATAAGTGACTTTATGTGCCAGATTTATGGAAATAACCTTTTATGGTAGAT-TGATGCTCACAGGAGCTTTAGAGAATAAAGACAATTGTAGCGTCAATTTGTAATGATTAAATTTTCTATGGTTTCAAAATCTCACTTCAATTGTTAAGACATATAACCATTTTCAAAATACTAGCTACCATTTATTCAACTTTATCATTATATAT--GTCATATATCAACATGATATTTTTATATCTGATTTTACTGAT---GTGAAAATCAATATAATTAACTGAGAGCATATTTTATAATTGTTATTATCTATAAATATTATCCAtaaataattattatctataaataattaatatttaattaataattaattaattTCTGTTATGAATGTAATAGTGTGTGATATATTTTAGATATTGATAATATTATTTT a score=8704 s hg17.chr15_random 323274 1009 + 784346 AATAAAGGTATTAT------------CATGCTTTGTACAGCAACCAACACGAAAATGTTACTATACCACTGCAATAAATAGAAT----AAAAACATGTTCAGAAAGACT------TAGAAACTCATTAAAGAATGGATGTTAATCACTTTTCACCCTAACTCCTCATTTGGCAAGGCATGAATCTATGCATTCCAGTTTAGACA----GGTGGCAAGTAAGTAGTCCCATTGCATTTCATAAAATAAGCAGCTGCGTGAATTTGAAAGATACTATTTCCACATGAAAAGCTAATGACTGCACATGTAAAATCAGTAGTGTTTAGGAAGCTGTCATTTAAAAAACAACAAACTACCTAATTAAAAAGTAGCACAAATAAACTTTTCCCTATGTAAAAAATAGAACATTGCTTAGCCTTTTCTTAAACCCCTCCCCAATTCTTACCAAGAAAGGATAAATACCTTTATTATAGTCAAAGCTCTGTTTTTATGGTTTTTGAATTTTTTAATCTAAAATTCAAAGCAAATAATCAAT-----CTTTAATTTATATTTATCCCAATTTGATTCAAAGTGACGGTCCAAAAGTAAAATGATCAATTATAACTATAATCAATCACAAATAATGCTATGTGAGTTTGAAATGTTAATCTAAGTTGCCTTTTCCAGGTATGCATTTTAAAATTAAACTCTTCTCAGTAAGATCAAGGCTATCCTTCATGGATTTATGATGTTTGATAATCACCACGTTGTACTGATTTGCTGTCTCACTTCACTGTTTGATATCAACATATGAAAGTAAAAATGCTATTTAGGGGATAACTATTATCTGAGCACTAATAAATTAAACGCTATTTTAAGCCAACAACAAAATTGTTTAGGGTACAATTTT--TATTTAACCAACTGTCCAT---------------------------------------------------------------------------------------------------TATAAACATT-------------------------ATAAAATTCTGAAAGATCCTAGAATCTTATATAGCTTTTTTGTATTTTTTCAAATGTAATTGACACCAGCATGAATTAAATTTCATATTTAAAAAGCTTCTGACTACATTACAACATACTT s mm7.chr14 9277422 1014 - 119226840 AGTAATATTATTTTTAAAAGTCACTGTATGCTTT--------ACAAATAACGAACTTTCAGCACACTATTATGATTAAACAAATAAGAAAAAGTATGTTTAGAAAAACTAGAAAGCATGAACTCATTAAAAAATGGGCATAACTCAATCTGCAGCCT--CACATTGTTTGGCAAGGCATGAATCGCCTCTTGCCAGTTTAGCCAAAGCAGCCACAGGGAAGCAATTTCATAACAGTGTGTAAAATAATCAGCAGTGTGAGCCAGAAAGAGGCTATGTCAGCAGTTGAAGTT----CCTGAACTCCTGGAGTCAGAAGCA--TAGGGA----CACTTCAGAAAACA---------TTAGATAAACAGCGCTGTAGGTTTTTTTGCCTCTAAATGAAA------------------------------------------CTTAC-----------AAATAC----ATCACAGTAG----------------------------TTAAAACTAAAAATCAAGCT--ATAATGAATATTTGCTCTAATTTATAATTATCTTCTTACAATTCAAAGTGACTGCTCAGACTTAAAATATTCTATTCTAGCTCCAGTCTATTAAA--------TATAGACATCTGAAATACTACAGTAACTTACATTTCCTACCCATTAATTTTAAAATTAAACTAT--GCAATAA-ATCA----TATTATTTATTGATATACACTGGCTAATAATCAAAATTATATTTTG-TTTAGAATTTCACTGCAGTGTTTCATGT-ATTATATGAAAAT----ATGCTATATATATATATACTATTATACAGGCCCTAAGGCA--------CATTTTAAGACGA-GTCAAAATGGTTCACAGTATAAATTCAACatctgtctatctatctatcctatcattatctatctttctatctttctagcaatctttatctatctTGCTCACTTGCTCTCTCTCACTAATAACAGAGACATGTTCTATCATTGAACATATAACCATTCTATAGACAATATTTTATCTGAGAGATATAATTTTAGATATTGCTGGAATTTTACA------TTTTGTATATTTCAAATTGTCATTTACATAAGAATCAATTCAACTTTTAGATAAAATAATGGCATTCTACATAAAAGTGAAGTT a score=15583 s hg17.chr15_random 324283 1406 + 784346 TAAAATTACTTGCAAGATATGATAATTCTAAGATTACCCACATATCATGCAAATGAAACAGCCAGGTACTTCCTACCAACACATGATACAATAAAATCCAGA--AGAACTTCTGAATTAGAGtgtagtagttgcctagggccatcatacctaatt------------------atcacacacttggtgggttaagaggacagaaatatattctctcatagttctgaagcctggacctctgaaatcaagatgtt----ggcggggccacactccccctgaagaccctagggaaga-attctccctcgcttcttcc--tggt---------ttccagtggctcctggcaatccttggctttctttgatttatgactgcataactccaatttctgtctccatcttcacatgaccttgtgtgtgtcttttcctgtatgttataaggacatttacactggatttagggcccaccttcacccaggatgacctcatctcaatcactgggttaattatatctgcaaagaccctacttccaaataaaatcacattctaaagttcctaatggacataaattttggaggtacGGTATT-TAAATCACTGCACAGAACATGT---AAAGACAAAAATCTGGAAGCTACCTGAATGAAAATGGATA--TTCCCTTGAACTTCGACAAAATCATATTCTATT-TTTCCATGAGAAACATTTTATTAATCTAAAACAATATTCATATTTCACAAGTACACCTCTTAAATTATAGCTTGGA--------------------------CTTAAGAAAA----ATAATTAGCTTTGGAAATTATCAGTACA----TGATATCTAGTATTTCCTATATTTTTAAGAACTTCTACCTCCTAGCAAAAATAAACAATGCAATGGATAATTTCTGTGTTCTAAATTCACACACACAAACAGGAAAGGGACTTTAAA-----------------AATGATGTGTTCTC-----------TTT--------------------------------TAAAGCAGAAGCCCAACCACCTGCTCT------GAATCTAA-----------AAGTTTCCTGAAAGCAATGAAGGGCTAGTTTATTATGAAGGTGTTGATAGCTGATTCTGTGGAGACTCACACAGAAACAAAGAATAAATTTTAATCACACTTAATGCTAATGTGGTAGTAAGGTTGTGACAATATTCAAATATGACTAATTTCATTGAATTAACTACACTC---GGGCTTAGCTTAGTTGTCCAAATTTATTACAAATAGCTCAAACTAAATAATTCAACTCTTCTGTTTTCTATTTATTTTTTGTTGATGCTTAAGAGTAAAAAGATATTTCAACTGAATTTTTTTTTTTTTTTTAGCAATCAGTTCTCTTGTTTTATCACCATAAGACTGTAAACGGCCGTAACAGGTCACTGAATCTAGCACTGCCTTCAACAAGAAATGCACCTAGAGCAGGAATATAGTACTTGGCACTCATCTCTAGACCTATAACCTAACAGATTTTTTTTTTTGTCTGTCTTTGGTGAAAGT s mm7.chr14 9281923 1377 - 119226840 CAAAGTTGTTTAGAAAGTACAATAATTGCAAAAAAAAAAAAAAACCCTCTGGAAGTTAATATTTGGTAATTCCTATCAAAACAGAATAAAATCA----CAGGACAGAACTTCTGAATTACATTGT-GTA-----TAAGGGTCATGATTACTATCTTAAAATAAAACAAAGAAAATGACCAAATGGTTATGTTTGAGGG--AAGAATACCGTTTGCTGCAATCTTCAAGCATATGCATCCAAAGTTAGGGCATCCTCAAGCCGGACTTCGTCTCTACGCAAGCTCAGAGGCAAGGTACTCCCCCACGCCTCCAACAGCGGTCACACGTCCTTCCAGTGCTTCTAGGAAAT----------------------------------GAAATTCTGCTT---------CACGCCCAT---------TTTTCCTGTAT--------------------------------------------TAATTACCTCACATCAAC-------TCAGCAGCATCTGAACATTCCCTGTTTCTAATGGGAGTCACAGACT-------CTAGTTTACAAAACCTTCAGAGGTGCTCCATTCTGACTCATGACACAGCTATTACAAAAAAAAAAAAAATGTACAAGCTCGATGAACAATACCAGAAAACTTCTCCGCAAGTTCATCAAGGTCACATTCTTTTATTTCCACACTAAAAA-ATTGTCATTATAAAAC----TTTATATTGCACAAA-GCATTTACTGAACTACAATGTTAATTTTTTTTCTATCGAAGTCAGTGTGCCTTAGGAAAATAATATATTCTACTTCAGAAATTGTTATCATAAATGCAGCATTTAG-ATATTCTCTATTTTCAATAACTTCTAAT--------AAAATTAGCCATATGAAAGATAATACAAATGATCCA-----ATATATAAAAGCAGATATGATATCTTAAAATCAGAAATTTTATGCTAGAGCTGTATCTTCATGGGAAAGCATTTGCCCTGCATGTTCAAATACCCAGCTTAGCACATAAAAAAAAAATCAAAGCATTTGTTCCTTTCAAAAACCTCAGATATAGATTCAGGTTTTCTAGAGACACCACAGGACTAGCT--------GTGTGTTCACATTTAATACCTCAGAGACCCTCACAAGCATAAA-AATTAATTTTAGCCACACTGAAGACTAGAGTAATAGCAA--TCGTGACAATACTCATATCCTAACAATTTCATAAAATTATACATACCCATTAAGTTCATCTTACTT-TCTCCATTTAATATAAATGACTCAAAACATATATTTAAA------------------GTTTAAAGTTG--GTTTAAGAATAAAATAGTGGTTTTACTGA---TATTTTATATTTTTAACAGTAACTTC---TGTTTTGTCACTGCGAGACTGTAAGGATCCAGAGCGGG---CTGAATCTCACAATGCCTTCAAGAAGAAATACACCTGTAGCAAGAATATAGTACTTGACATTCATCTCTTAGCCTAGAGCCTAATGGA---TTTCTTTTGTCTGCCTTTGGTGACAAC a score=10165 s hg17.chr15_random 326074 355 + 784346 GCATGTTTATTTCATCATTTTGTACTTATACACTGTGTATTTCCAGAAAAGCCCCTGAGACAGCTTAGAATGAAAGGCACAGACACTATAAAACAAGGGCAAAATGACAGAATAATGAAGAGAAAGAGGTGACAATTACATGGGACAACCTAGGGAAGGAAACACTACCCTTCAGCCTAAAATTTAGTCCTAAGCCCCTTGTTCTTAAAGGCCAAAAGGAAAACCAGAATTCAAATAGGTATTGTT-------AGTTAAT-----AAAATAGTATCTGG----ATATATCAGCAACTATTTTTTGGT-AACT-CTAAACTC--AAGCA-AAATATATGTCTTCAAGCAACAGACAATGGACAATATAATAAAAATA s mm7.chr14 9283385 372 - 119226840 TTTTTTTTTTTTCATTCTTTTCTATGTATGTGATGTGGATTTCT--GAAGGTTTCTGAGACAGCTTTTCATTAAAGGCACAGAC-TTATAAAACAAAGA-AAAATGAAAAAATAATGAAGGCAAATGGAAGAAAATTATATGTGGAAATAGATGGAGAGAGACACTAGCCACCCATCAGAAACTTTACCCAAACTCTTTTGTTGGTGAGGACCAGAAAGAAAACCAGAAATCAAATAGATCATATTTACTACAAATTACCTACCAAAAAGAGTATATGTCAGCATATGATTACAACCATGTTTTGGTCAACTGATGATCTCCTAAGCATATTTATAAATCTTTAAGTAATAGAGAATAAATGATTCAGTAGAAATA a score=9367 s hg17.chr15_random 332400 173 + 784346 aattaaatatGTCCCATCAGTTTAGTCATTTTAATATTCTCACTCATCAGACATTTTTTGGGAACACCATATGCCTTTTCATGCAGTCAGTTTCAAGAAAATGAAAATTACTTTTTATATGTTTATACTCAAAGCTTGGCTAGAGATAAGTCTCCCCTTCCTTAAGTTGGGGA s mm7.chr14 24914003 164 + 119226840 AGTTACAAATGTCCCATCAGTGTAGTCATTTTAATGTTCTCACGCACCAGACGTTTCT-GGGGACACCATATGCCCTTTCATCAACTCGGTCTCAAGAAAATGAAAATTACTTTTTATCTGCTTACA---AAAACTCGGGTACAGAGAAATCTC-----CATTAAGTTAAGGA a score=35016 s hg17.chr15_random 336259 1512 + 784346 TGCAGCAATTTATCTTTAAACACTAAATGACATCTATCATTTTTCAAAGAAAATAGTGTCAGCAGTTAAAATCCTAACTGCTTGAGCACTGTTAGTTGACAATTATAATGCCCCATTGCTTAGAAATTAATTGACCTACTTTCAATAAGAAACATAAAAAGTAATATCACAGCAATTTTCTGGATCTATTTTATTCCAAAACCAATAAATGTTACAGTGTTGTTAAAAGTAATAGATTTAAAAACATTTTATTTTCTTAAACTTAACAATTCAAATAACATAAAATAATATTACGTTTCTATTAAGTATTCATTTTTATACAGACCAAAAGTTCTTTA-GAAAATGTCTTCATGTATAATATAAATTTGATTTTTAGATGTGAGAAAAGCAACAATCATAATCGTTGCCTAAATCCACAAAATAAGTAGATATTCTATAATATGTATTTCAGTAATCACAATGTATTGGATTCAGGCAGAGATGAGAGACACTCTGATTTTA-GCAGAAAAAGACTGTGTTAAATTACCTCTTTGCCTTTTCTCACTCTGTTCCTAGGATAGCAATATAATAAATAGTAACTTTAGAACTGGGATACACTGAGAAAATGTCCTAATTTAAATCTCAATAGATGATTACACAG-GTAGTGTTTacacacac--acacacacacacaATGACAGGAGTTTTTAAAGATATTAGTATCTCGGAATTTTTGAATTCTGAAAACTGTCCAAGCTTTTATCATTAAATCACTTGTTATGAAACCCATTTTAGAAACACGCTTTCCTATTTTTAATAGCCTATGATAGTCATACAGAATGAGTTAATCAAAATTGATTGGTCAATTGCTAATTGCAAATTCTTTGACCGTAGCATGTCAGCTGATTCTATGAACTTCTACAGACTCTTTCCCTTGGTCCGGGAGTT-------GCCACAACACT-------CTGACTCCTTTCCCCACAACTCCATTACATGATATTGTCACCTCCCCAGGCTTACGATACTAATATTCCAGAGAGATGAACAGTCCTTGATTTTGAAT-AGCAATGCAGTAGTGACCAAAACAGATTTAGTTTTGGTTCAGAAGAAAGTGCTGGATATGCCCTCAGTAACTTTCCATGGTCATCTAATTCAGCAATTAGTTTG----AGTAAATTCAATGGAAGGCTGCTTTCTGGAATGGGTAGTGTAATGTACTGACTTCCCTATTAGACATTTCATTTAAAAAAATCAATTGTCCGCATAAAACAACCATTTCAATCAGTGTACATTCAACTGGAAAGGAAAGTTAGAGGACTTTTTTTGAAAGTAATGGGATTGGGGTTGGCCGTTGCTAATTTCTTTTTGATT-----AAAGCGTATGTAATTGTTTTGTGTTGGATAAAAATTTGACTTTTTATTTGCGCGGAT---GCTGCTGATCTTATATGTTATCATTTCCCATTCAGACTTGAGCTGTTTACCTG-CCGGGTTTTCTGTTCATAAAATGTTGAAAGGACGTTAAAATGTAGAAC-TTTTACATTTTTTATT s mm7.chr14 109966239 1378 + 119226840 TGTAACAAATTGTCTTTAAACATTAAA---CATCTACTATTTTT---AAAAAATGCTGACAGAATCTCAAATACCAACCTCT-GAGTA---TTAGTAGGTTAAGTTGATGGTTTGCTGTTTAGAAATTAATTTGCATGTTTTTATTATGGGATGCAAAATGCAATG---------------GAATTCAGTTTT--------CCATTAACT--------------------------------AGTGTTTTGTTTCCTCAGACATAACT----------CATTTAAGAGCATCAAGTTTCTATTAAACATCTGTTTA-ATATGGATTAAAACTTCTTCATGAAACTGTATTTATGTATTTTGTAAATTTTACTTTCT--TACTGAAAGGGAAGAAATCATAGCCATT-----AAAGAGTAGAATAACCATACATATGATAACATTT-TTCAAATGATCACAGTGTATTACATTCAAGCAGAGATGA----TACTTTTATCTTATGTAGGGAACATCTATGCTAAATAGATTCT--GCCTTTTTTGTCTCT-TTTGTGAAATACCAGTTTGATGAATAGTCATTTGAGAACCATGATGGAATGA-AAGAGATTTTAACTTAAATCTCAATGAATAGTTATAAAATACAGTATTTGCAAATACCAAAAAAAAAAAAAAAAGCCAAGACTTTCTAAAGATACTGTTATTTCAAAGTTTCTAAATTCTGAGGAGTTCTCAAGCTACTCACAGTAAAT---TTACTGTGTAATACATTTTAGAAA-----TTTTCTACTTGTTTTA-TCTGTGCTA-------------------TCAAACCTGTCTGTCC------------------CTTAGATCTCAA-ATGTCAACAGGTTCTGGGA--TTCTTTTTTTCCTTTTGCCTAATCCTGTGGTTCTTCTGGAACATGACACTATATATACTGACTCCTTCACATGGTTCTGAATCACACAGTA--GTCATGGCCCCAGGCCTCTGGTACTAATATCGCAGATAATCAACAAGTTCTCCACTTGGTATTAGCAATGCAACAGCCCTCAAAACACACAT--------TTGAGAAGAAAGTACTTGGAATGCACTCACTAAATTTTAATGGCCATCAAATTCGACAATTAGTTTGTTTGAGAAAATTCAATTGAAGGCTGCTTTCTGGAGTGG--AAGGTAGGACTCTGACTCCACTATTGGCTAGTCCACTTAAAACAATCAATTGCTAGCATAAAAGAACCATTTCAATTAGTGTACAATCAACTGGAAACAAAGTCTTAAGAACTCTCTTTGAAAGTAATGAGATTAGCATTGGTCATTGTTGATTTATTTCTGATTATTTAAAAGAGTATGTAATTGTCTTGCACTGACTGAGGATGAAGCTTTGTATTCACTTCAGTAAGGGCATTGAGCTTGCATGATA---------------AAATGAGCAATTTCCCAGATAGAGTTTTCTTTTTATACATATTTGAAAGAATGTTGATAACTAAAACtttttaaaatttttatt a score=13822 s hg17.chr15_random 338215 548 + 784346 ATCATTTTTAAATTATGTATCTGGGAATATATTATCAAACCAGGCCTGAAACTTATTAAAAAGATGGTAAAATCTAATTTAACTTCATTTAATACTCCTTTTCTCTTAGTCTTATAAAAGCAAATGAGCTTGTTGGCTTTTCATTATGaaaatataattttaatttataaGACATATGTAACAAAGCAAGATAGCTGCTAAATTCACTCTA----TCCTAGTAACTTCCTATTGCATACATTCATTTTTAATGTAATAAGAAAATCCTTTCAAAA---TGCTTAAAAGAATCACATTACCCAAGAAGAGGCTCAACATTTCTAGAAAATAAATATGTTCTTAAGACAC-------TTAATAATTCTTGAAATGAAGACCTAATTCTTCAGGGCTTTAAAATATTTGATGTGCAC-TCTTTACATATATAGAGAGTTTAAATTTAATAATTTCCCTTCTTAAAAAAGAAGTGAAACATACCACAAACATATCAAAGCAAGTTATTCATACT----TCTCATTTAAGTAACTGTATTGTCATAGCAAAATTATTTTATATCATCAAACA s mm7.chr14 109974345 525 + 119226840 ATTATTTTGAAATTTTATAATGTGAAATTTATTA--AGACTAGTCCTAAATCCCAGAAAACAGGCAATGGAATGCTCTTTAACTTTCTTTAATAGCCTCTCTCATTTCATCTTATGAAAG----TGAGTTAGCCAGCTTTTAACTGTGCAAGTCTAAGCTCATTTTCTAAG---------------CAAGATAACT--TACCTTTGCCTTACCAATCCTAGGAAATTTCTACTGTAAACTTCCACATTTAATTTAATAAGAAAAGTTTTTCGAAGGCTTTTCTACAAGGATCACAGCACCAGGGAGAATGTCTAAATTGTCTGGAAAATAAACATATTCATAAAGCATATATACATTTATAAATCTTGTTA-----AACTTAGTCTTAAGAGCTTTAAAATCCTTAAT-TGCATATATTCAAATATAGGAAGAATTTTAATTTCATAGTATCCCATC-aaaaatataagaaaaatataattcaaatatataaaaataaattatttGTACTTAGATTCCATTTAGGTAATGATAT------------ATTCTTTTTCTTCAGAAAACA a score=11411 s hg17.chr15_random 339291 921 + 784346 AAAAATTTCAAGATACTGTAAATTTAAAACAAATCTTTATGTATAATACCATCGTAATGTCTTTGACCAGGAGCAATCTATCATGTGAGATAAAAAATATTAAATATGCATTTATTGAATAA-ATGAATGAAAATCATGATTACCTTGATCACTATATTTAAAATTTAAATGAAGCAGGAAAGTAAATCTTCCTAATTATCATATACTTAACATAACTGTTTAAAATCACTCTAATAAC-AAGTAATATGTTAATTTTGAATTATAATTTTAAAATGCCTGT-ATTGTTTCATTCACTCATCCTTCCattagttcagtgaacaaatattgattacttacc-----cactatgtgccaggtatcatcatagattcagggagtacaaaaatggttaaaCGAAGGGATCAGCTGGAGTGACCGTTTTCTAGAAACAATGCCTATTTCAGTTATGAACTAGTCTGTTTTGAAGA-AAGTGGTGAGGGAAAGCTGAAA--ATCCTATT-------------------------------ttcactt-----------------tattcaacaaatcttattgaggtcttattat-gaatcaggggctctcctaggtatgggcatacaaaattgattaagac---TGTGCTTGCTTGCAGAA---------------------AACAAACAAAAAAGC-----ATCTCTATAATAAAAAGGAAAAAGAGGAAATTCCCTTTGTAGGTTTCATAGTTTATAGTGATACTGCTGATGTTGTC-TCAGAGAATTAGTCACAATTATAGGAACTCAGAAGGCATTCCGTTGAGATGAAATAGAGACTAAAGTAGCAGAGATTACT-TAGTGAAATAA-----------CAATTCGAACATAGTTATAATTCATTTTAGAAGATATTATGGCTCACACATAGTAGATGTGATGACTGAATAACAGGAATGTGGAACGATGGCACCTTGGTAGCCATTACCCATTGCCAACATGATTCTGCATTAAAAAATCTGT s mm7.chr14 109975270 978 + 119226840 GAAAACTTTAAAGTTTTTTCCACTTAAGATTAATCTCAATATCCAAGACTACTGTAAAATCTTT----ATGTGTAATCT-CCACTTTCCATAGAATATA------AAGAATTAATAAAATGGTGTGaat-aaattaataattaatttgattactatatataaaatCAAAAT-----AGGAAAGCCAATCTATCAATGTATCATGTACTAATAATAAC----TAAAATCATTCTCAAAATGAAGAATTATTTTTATCTTGAATT-TAATTAAAAGATTCTTGTAATTTTGTAATCTACCCATCTTTTAA--AACTC--CTGGCAGATATTAAGTTATTACCTTCTGCTCTGTGTGCTCAATACTCTAATAACTATAAGAAATACAGAACTGAGAAAATAAAAACACTGGTTAGGGTTATGACATTCCAGAA-------TAATATCTGTTATTAACTGGTTTGCTTCCAAGGCAAGTGGGAAGTAAAGACTAAAAACATTCTATTTCTCAAACAAATAtatttgattatttatttatttacttatctatctatttatttatttTTATTAGATATTTTTGAAATTCTAGCATAAAATAAGAGACCCCCCTGTTTAT-----TTTAATATGGATCAGACCAGTTATGCGACCTTTCAAAAACTAGTATAAACCACAAAAGGAGCAAAGGGAAAAACTGAATATTCACATAATAATCAAATAAATGAAGAATCCACATTTTTAGACTTTATAGT-----AAGATTTTTCCTCCATCTTCATCAAATACATA--TACAGTTCCAAGAACTTAAAATGTGCCTCATTCCAATTGAAATTAGAGTTAATTACCAGAGGTCATTGTAGAAAAGTGATGTTACCATGTTAATCAGAACATGTTAACATTATGTTTGAAACAATATTATGACTTGTTTATAGCGGAAGTAATACCTGCTTGAAAGAAATGGTTGATAATGACGTATATTGGGCAATCTAGTATTGCTGTAATGATTTCTTATTGGGAAACTTTT a score=649 s hg17.chr15_random 340521 38 + 784346 CACAACTTTGGAGTATATTAATAAACATTGTGtttttt s mm7.chr14 109976250 36 + 119226840 TCCGACTTTGGTGGA-ATTACTCAAC-TTCTGTTCATT a score=35357 s hg17.chr15_random 340565 760 + 784346 aaaattttaatcttt-----aatttCCGTTTTCACATATTTCTTCTTGCTTCCAAAAGGAAAGGAGTGGGTAGCTCTG----TTGTACACCGTCCACGGCCCCTGGAT--CCGGGCGGGGTCCCCCGGGCCACCTGGGGGTCCACATGCAGCCCC--CGGGAGGCCGGTGCGGGGTGAGGTCCGGGGGCCGCCTTATTGCTGAAGTCCGGCCGGTTGGGGCCCCGGCGGCCGCTAGGCGCTCTGGCTGCGCAGCTCCTGGGAGATGAAGCGGCGCAGGCGCTCCAGGTACTGGCTGTAGAGCTGGATGTCTTTGTGCCCGGCGCCCTCCACCCACAGCGGCTCCACGGCCTTGGGGCAGCGCTCCTAGAGCGCCAGCCCCTGCGAGAAGTCGATCACCTCGTCTTTCGTGCCGTGGATAATGAGCACGGGCGACGTGATCTTGGACACCTTCTGGATTCTGCGGGAGGGGCGTGGGGCGGGTGAGACCTCTCCGGGCCCGGGccccgccccgccccagtccccgacccagtccccgtccccgcccctgtccctgccccagccTGCTCACTTGGGGAAGGCGTCGAAGCAGTAGGTCTTCTTGGTGTC-GGGAAGGCGACGCTCAGGTCCAAGGTGAGCGGCGAGTGCAGCACCACCGCGGCGGACTCGTAGCGCGAGGCCAGGTCCACGGTGGGCACCGTGCCGATGCTCTGCCGGTACAGGATGATGCTGTCCGGGCTGATGCGGTACCTG-GCGGC-ACCGGAGCAGGGTCAGC s mm7.chr10 80373188 695 + 130066766 AAAATCTTAATCCTTTAATTAGTTTCCCTCTTTCC----TTCTCTTTGCTTCCATGAGGAGAGAAGAGGG-ACCTCTGACGCCTGAACATGGCTCATGGCCCCTGGGGTGCCAGGCAGGGTCCT--GGGCTCC-----GGGTCACATGCAGTCCCGGCAGGAGGCCCATG------------------------TACTGCTGAGGTCCCTGCAGCTTGG-------------CTAGGCGCGTTGGCTGGGCAGCTCCTGGGAAATGAAGCGGCGTAGGCGCTCCAGGTATTGACTGTACAGCTCAATGTCATTGTGCCCAGCGCCCTCCACCCACAGCGGCTCCACAGCCTTTGGGCAGCGCTCATACAGTGCCAGCCCGTGAGAGAAGTCGATCACCTCGTCCTCTGTGCCGTGGATGATGAGCACCGGTGACGTGATCTTCGACACCTTCTCGATGCTGAGGGA-----------------AAAGATGCACAGGCTGGAGCCCCACCCTTTCTCATGCCCCG-CCCTTTCCCAGGCTCCGCCCC--------------CATGCTCACTTAGGGAAAGCATCGAAGCAGTAGGTCTTCTTGGTGTCAGGGAAGGCCACCCGCATGCCCGAGGTGAGAGGCGAGTGCAGAACCACTGCAGCACACTCGTAGCGTGACGCCAGATCCACTGTGGGCACAGTGCCAATGCTCTGGCCATACAGGATGATACTGTCTGGGCTGATGCCATACCTGAGCGACAACAGGAGCAGGGTCAGC a score=12258 s hg17.chr15_random 343545 180 + 784346 GCCCTCACCTGGTGCGCAGGGCCTGCCGGGCGGCGTCGATGTCGGCGTAGAGGTTCGTCTCGGAGGGCCTGCCCGAGCTGGCACCGTAGCCGGAGTAGTCGTAGGAGAAGATGTTGCAGTGGAGGCGGGAACACAGGCCAATGTAGAAGCTGCTCATCTGGCCCAGGTCCAC-GCGTTGCC s mm7.chr10 80375133 181 + 130066766 GCCCTCACCTGGTACGCAGGGCCTGCCAGGCTGCATCAATGTCAGCATAGAGGTTCTTCTCCGAGGGCCGGCCAGAGCTGATCCCATAGCCAGAGTAGTCATAAGAGAAGATGTTGCAGCCGATGCGTGTGCCCAGGCCAACATAGAAGCTGCACATCTGGCCCAGGTCCACTGCATTGCC a score=42259 s hg17.chr15_random 343946 2558 + 784346 taagatacccctttggcttaagcagagtcacacagcaaggat---caaagtcaaggagtggggaattataTCTGTCCCTTAGAGATGGAGATAGGAGAGAGTGTGAACAAATGCAGGAAAATGATCTCATCTACCAGAGTGTCCTTAAAGATTTTA---ACATAATAAATTCAGTATTGTTTTTGTTTGTTTGAATGAAGCTTTGCATGGACACAGTACAGTACAAAAGTACTATTTGAACTCTTTCTCCACATTCATAAAATTGCTACATAGTTTCTACCATGATTATATTT-TTATGATCCATTTTTGTGTACAGATCTGAAAACTTTATACT-AGAATTTATTAGCTGAGGAAAGGAACATGCACTGACATCATCATACACA-AATATTTCTC----AACATTTTAATGCTTGTGGTATTGTTAATGTTTCTGTGGAAAATTAC--TTAAAATCATAGAAGTGATTTCTAAGTCAGTTATTGATTTATTCTGATGAATTATAAAAATCAGACTAAATTAGTAATAGAGAAATTACACTTGAAAT-------ACTAGTCTGAGCTACAAATGAGAT-GGATTTTTGTGCTCATCATTTGTACTCTAGTTATGTTTGTT--GAGATTGGGTTATGAAAACATCATTATAACATTATCAGCAGAAAAGCCTGTTGTGCTATAATTAAATCATCTAAACAATCATTT-TTGTGGTCTTAATATCCTGGATTTCTCAATTGATTGTAGTAGATAAGAGTTCTCTTTAAATACTACTTATTATCGGTAGCTTGCTTTTCTGTGAAATCTAGAAAATTTAGAATTCTGCATTAACATTTAATAA-AATACCTGCTATCCTAATATTGATGCATTATATTTATCTATACAACATGCAACAGGAGAGAAATATCAGATGAATTAGAATATTTGCAGCCTATGGCAATTATCTGTAGCCACATTTTTTTTTGTCTTCAGAAAAATGTAGATGATTTTGGAAATGGATTAGTTCTAGTCTCAATCTAGGAAGAATTACTTATGGAAGTTTTGTGTACAGGATACTGATGTTTTCAAATATAACGCATTATTATTTTAGTTTAGTTTCTTTTGCCACATACTTAGAAATTGTTCAAGTGAACAGGCTATTAAAACGAATGGT-ATAGATAAATGGTATAGATAGGCATTGTAA-----ACATCCCACTTTTCCCAAGCCATGAATTTTAACACTGGATTAAGGAGATGAAAATGGAGCCATTGGGAATGTGGATTCTTTGCTAATAATTATTTTTCTTCTTTAAAAAGATTCTTCAAAAGGCAAGAA--CATGGAAGTATTTCAGG-AGATATTCTTGAGGTATCTAAAATACATACTCTTCCTATCAAAATCAATAAATAGAT--GGATGTAAGTAAGATAAAGTCAGGGCAACT-GATTTTGCATGTGAGTGTACACACAGACACATATCCAGGTTTTCTCCATCTGTTCTCAGTTGCTGAATTATTAGACTCAGCTGACCGCTTGACTGTGTTTAATCTGATAAACAGACTCTTAACAAGAAGAACAATGTTTTAAAAACTGGACTGTTCCTCCTACTTCTCAGCATGCATCAGCCACTCTCTTTCCCCATCCTATCTCCTGCCAAATTGGTCTCTACTTATCTGTTCCACTTGGAGACACTATTTGATGTTGTTGTAAATGACATAAATGAATATTCACTCTACCTGCTTTCATATTAATTCAGTTTTCATAGGATGGTCTCTGTGGGATCAAGCAAAAGGACTTAG--TGGAATATCTCT----TATGACTCCATAAAGTAAAGAATGT-------------------GGTGAGTTTAGCAGAGTGCACCTTCCTTTACTAAATG--TGAATGATGTGTCAGTATA--GGGGGCCAGAGTGAAAAGTCCTAACATATGCTTG----TTTGGGCAGCCAACAATTGGTCACATTGCACATTTCAT-GTTACAAAGGAGCCTCATGGTAGTATAAATGA-GGGTCAGGAAAAGACACTTAACTGTGCTCTGGGCTTTAAAATGGAGCCAGGGCAAGAATTCTGGAATTTGACAATGTCAGGAAGGAA-ACCTCTGTAAGCAGGCACGCAGGGGACTCCAGAAATCTCTTCTTTGCCACTACAACTCTGGACTTTCAGAAATACACACCCCATTCTCCTGTATTAATACACACTTCATGTTCACAACATCA--AAAACCAATTTTAAA-ATAGTAAACCTA----AGGTAGATGGAAAGGCATTATAGCCTCAGCATGCCCGAGA------------------TGTGAGGAGCAAATCAGAAAGATGTGAGTGTGACGAGAAAGGGACATCGTGCTAACCAATCATTTAAAATTTTTACTCCAAAGAAATGGCAATATTTCACAGGTT-TTTTCTCATCACCAATCTCACAAATATA----CATGTT---------TTTTGAAAATTTTCC-------------------------------TCTCAATTCTTCTCCT----------TGACAGTG------------AAGTCCAGAA--------GAGGTTGGTTTAGATCTAACTCTTTT---CAGCCTCA---------------ATACTCCATA----ATCACTTTGGCTTTTTTGATTATGACTGGACGGCATGTACtattatt-ttaatattaaatatttaggaaataattttaaatGTTATCCTTAAATAACTATGGGCTTTATTC s mm7.chr14 109976313 2602 + 119226840 TAAGATAGTCCCTTTGCAAAGGTA---TGACACTTGAAAAATATCCAGAGTCAAGCAGTACATAGTTCTATTCTTC--GAAGTGATGGAAGTAGGGGAGAATGTAAAT---TTTTGAAGCATGTTCTATACTACTAAAATATTAGTTAATAATTAATGCAAATAATAAGTGCA------------TTTGTTTGAA-AAGGTTGAGCACAGAAAGAGTATGGGCCAAAGCTATTGTTTAA--TAATCCTCCACATTGATCAAAGTGTTATGTATTTCC------AATTGCATTTGTTATTAGGCATATTTTT--ACAATTATGAAAACTGTATATTTAGAATTTATTTGAT-AGAAAATTCTGATATGCTGAAATCATCATAGAAGTAATAATTGTAGGGGATTTTGTTGACAATTGTGTTACTGT----GTTGATAGGGAAAAAAACCCTGGGAATTAAAGACATGATTTCTAAGTCATATACTGATTTATT-TAACAA--CATAAAATTTAGTCTAAATTACTTA-ACAAAAATTACATTTGAAAACTAGAAAACTAGTGTGAGCTACAAATGAAATAGGGTTTTCATGTTAAACATTTAGACAGTACTTGTTTTTATTTTAAGATTGGTTCATTAAAACATAATTATAACAT---CAGTGGAAAAACATTT---GATATAATTAAATCATTTAAATAATCACTTCTTAAGGTCTTAATATCCTGCATTTCACACTCCATAGCTGTAGATAAGAATTCTCTGTAAATACAATTCATTATGAGTACTTTACTCTTCTA-AAATGCTAGAGAATTTAAAATTATACATTGGCACATAAGAACAATACAT--TGGCCTGATATGGATATACTGTGCTTATCAATAATACAAGGCACAGAGAGAAGATACA--------CAGAACATTTGCAAC-TATAGCAGTTACTT--AACAACTTTCCCTTTTAACCTTTTTAAAATGTTGTTGACATTATAAATCATCTAGATCAAGTTTCAATCTAGTTATAAATATTCAT--ACCCTTTGTTCATAGCACAGCAACATTTTCAAGTATCA------ATTGCTC-------ATGTCCTCTGTTCTATATTTCA-----GTTTATTGATATAAGGTATTAAACCTAACAGTTGCTAAGAACTAGTATTGAT-GTCATTGTTACCCCCACCCCACACTCCTCTCAACACTGAAAATTCATCACTGGAAAAGGGAAATGATAATGG-GCTATTGAAAAGGAAAATTCTTTGCCAATCACCAGTTCTCAT---TGAAACCATTGCTCAATAGATGATAAAGTATTGAAGTGTTTTGGGGAAATATTCTTCAAGTATATAACATGCATGTCCACCCTAATAAA-TTATTATACAAATCAGGGAAAGAGAAAAATCAATTCAGTGCTGTTTAATTTTGTGTCATCATGTATCC-----TACATATCCATGT-------AGCTTCTCTCCATTGCTTAACCATTGCACT-------------------ACTTAAGCTGTTAAAC----TCTGAACAATAACAGCAATGTTA-AAAGTCTCATCTGTTTCCTCTTCTAACTCTCATGTGTCTGT-ACTCTCGTTGCC-ACCCT-TGCCCTGCTCATCTGGTTTCTAAACATCTGACACAC--AGAGATCCTAGTTAATGTTGT---AAATTACTTCAGTGCATATCTAC-CTACCTGACTTTATGCTACTTCAATTTTAGT--TATGGTTGTGATTAAATCAAGCAGAAATA-TCAGCATGGAGTATTATTGCTACATTATCCCACAGAGTAAAGAATGTATACTTGTGTTTGAAATGTGGTCAATTT--TATAATGTCCCTCCTATAACTAACTGACTGTGCAATACCTTATCATACCATAGGCCTCAATGGAAATTCTTCAATTTTTATTGGGTTTTTTTGTAGCTAACAATTAAACACATGGCACATTTTACCTTTGCATCAGTGTCTCCTGATGATACAGAAGCTGGATGAGGGG--GATGGTTAATTTTGCTTAGATCATTAAAACATGGCCAGAGTAGGAATGATAGAAATCAATAACAGGAGAAAGACATATCTTTGGAAAGTGGCAAATAGGGAACCCCAAAAATCTCTTCTCT-CATTTACCACCCTCGATTTCCTGAAATACACATCT-GTGATGTGGAACTGAAATAATAGCCATGCTTAGACCATTATGAATAGCATTTATAAACAAAGTCTGCATATAGGAAGTACACAGAAAGACATTGTGAGCAAAGCCTGACTCAGACCAGAGAGCAAGGGAAAATGCAAGGAAGGAAACCGAGAACTGCTAAGGTGA-AAGGATGGCCCATTAGAGGTGAGGATCTTTTACAGTATTTATTCACAGCATACAGCAGTATTTCATAAACTATCTTCTCAATGTCAATGTCATAAATACAGAATCGTTTTGGAAAATAGTTTGGAAAATTTTTCATGATAGTAAAGTTGAGAATAGAACAGTTGATTTCAACATCTATTCTACACAGGCTCTGCCAGTGCCTGTAATCACAGAGTCCAGAATTGAGAAAAATGTACATTTCTTTCTGATTTTTTTTGCCAATCTCATTTAGACCTAGTTCTATACTTCACATTCAACCACCCCACTATTTTCTACTCT---TAGGCTGTGAAAACTGTCATTGTTAATATCA----TTAATAGTGCAAAGGTAAATGTT---CTTGAACCACTGAG---TTTATGC a score=913 s hg17.chr15_random 346541 110 + 784346 TAAGGATTTTAATTCAAATGGTCCCTAAAGTAGAAAATGCACTCACAGATTCTGCATATGTCTTTTAAGAAACAGAAACGTGCCATTTGTTATTAAATTGAGTAGACTTT s mm7.chr14 109979256 100 + 119226840 TATGAAGGTGAAGTAAAATAA-CCTTAAAATATTAACATCACT---------TGCAGTTGTGAGTTTGGAAGCAGTTTTGAGCCATTGGTTTTAGGGATGAGAATGCTCt a score=24723 s hg17.chr15_random 346693 759 + 784346 GAGAACCTATCAACCATATCTTAATTTTCTTCTTTTTGAGGTCTTCAAAATTAACAT-TGGCATTGGTCCACTAATTCCTTGT-TTTCTATTTTTGGATGAGTGTGCATAGA----TTACCTCCATCTTAATTTTCAACATAAACTTTTAGCAGACTCTTTCACCTTTCATTGCCATGTAAGCAGATGTGATTTTTATTCTTTTTTCCTTTTCATTGAACAGTTACTTCATTTGAAATTTTTCACTTGATTTAATTTAACTTTATTTTTTGGTGGTAGATACATCTGTTGCCACCTGTGTCTGGTTGGCATTTTAATGTGTTGCCTCGAAGCTGTAACCACAATAGTGGCACATTTTCCTGCTGTTCCTTTATTCTTTGTTCCATGTGTATCTATTTTCAATAAATTGCATTGGTATATTATCATAGATTTTCTTTTTGTCTCTCAGATTTTCTGTTGTAATTATTTTTATTTATGCCTTTGGAAA-TATTTT---ATGATTGTTACATAAAACAGCAGAGCTCTTTCAGAAAGTTTTCATGGTTTTCCAAATGTACATTCATATAGATTATTTAGTAGTTATTACACAATGATCTTTGGAGCAATAAATGCTGTTACGTAAGAACAATTCCCAAATGTAA---TTTGAGTTATAAGCTAGCCTTTGATGGCCTAGAATTGATGTACCTTTATAATTCTAATCTGCATGCAAATTTAAGAAGACCAAGGATTGaggattgggtgcataattttcagggcccagtaaaaagtg s mm7.chr14 109980401 733 + 119226840 GATAATCTATAGGCTAT----TAGCTCTTTCATTTGTAAG-------AGGTAAACATCTTGGATCTGCCAGTTAATTCTTTTCCTTTTTATTATCCAATGCATGCTCACAGACTGCTTACCTACATCTGAATTTTCAGCATACACTTCGAGCG--------CTAATTTCCTCATCCTGTAAACAGATGTGATTTTTATTCTTTT--CCTTCTCATTGAACA----CCTCATTTGAGATTTT-CACTTGATTTAATTTAACTTT-----TTAATGGTAGGTACATCTGTTGCTGTCTGTATCTGGTTGTCATTTTAATGGTTTGCCTGGAAGCCGAAGC--TGATAGAAGTAGATTTTCTTGCTGTTCCCTT-TCCTTTGTTCTAGATGTATCTACTTTTAAGAAATGGAATTGGTTTATTATCACAATTTGGTTTTGCCTTTCCAGGTTCTTCATCTATATTCATTTTTATATACACCATTAGAAAGTATTTTTGATTAATTGATTTGTTAACTATCAGACTTCCCTTA-AAAGTCTTTAATATTTCCCAGATGACTATTAGTAGAGATT-CTTAGTGGTTACTATAAGATAGGCTTCACAACAGTAAATGTTATTATATGAGGACAATTCATCAATGTAAAGCTTAGCCTAATACACTAGCCTTTAAATTTTCATAAATAATACA---TTATCATTTTAATTTTCATACAAATTTAAGAAGACCATGTAGTCAGCACCAGCTACATAGCCCTCAAGCCCCAAGATAATATG a score=11524 s hg17.chr15_random 355768 628 + 784346 acaaTCCTGAACAAATGGTTGCACATAACCAGCTAAACAGTAATATAACAGTTGTTGGCAGGGTGAGAAGAAACTAGCAGACTGTAGGTTTGTCATACTGTTTTTTTGTTTCTCCAGAAACACAGATATAATATAGGCAATGAAAGCTGAGACTCATCTCTTAATTTCAGTTAAGCTATTAATTGATTTACATC---ATTTACTTACAGGTCAGAAAAGTTCCTTTCAAAAGGCAGGAATGTTGTTTCATGTTAATCTAAGGACTTGCTTACCTTTTGTTTCTGTTCTTAATGATCACAGTTACTAATACAGTTAAATAAT-------ATTTAGATAAAATACATTACAATTATAGCTGATCAAAAATCTCATTCCAAGCTGTTATATTGTTGA-----CTATCTCATGATCACTCTTCTTATGAATCATGTAAATAGGGAAAAATACTGCAAA-----GTAGACCCACGTTACTTCAAATGAAATATGATTTAATAAAATCAG-TTATTCTTTGCCAATTTTGTAATGTTCAAAATaaccacaattgaaatagtgatacatacacatcagaacagttcaaatgaaaaagagaaatgataccaagtgttggcaaagatgcggagcaactagaactctctcccattgtgg s mm7.chr14 9273414 587 - 119226840 ACAATTCTCAGTAAACA-TTCAGGATTGTCAGCTAAACAGAGAAATAGCAGCCATCGCTGGA---AGAACAA-------------------TTTATACAATTTCTT-------CTAACAACACAGCCACAGTTAAAGTAATAGAAAGCAATGCTCA-CACACAACTTCAATGAAGCTATTAATTTGCTCTAATTCCTATTCATCCACAGACCAGGGAGA---ATGTTAACCAGTAGTAAGAGTGCTTGGTATTAACCTGGGGAACTTCTTGCTTTTTGATGTT----TTGATTATCACAGTTTATGATACTGTTGATTAATTGAATAAACCCAGGTAAAATTTATCAGAATTATGACTGATGAGGAATCACAATTCA-GCTCCTTTACtattaaatattttattttatttttaCTCCTCTTA-----CTTGTATA----GTAAAACattataaattttagtaaa--------aattaaaatgaaatatgatttattGAAAGCAGGTTCTTCCTTG--ATTTGTATGAGAAACAACAGTACGACA--TAAGAGCCTAATGTTTAtac--tacaatggttcaagtgaaaaagattggtggtatctggtgttggtaagaacacagggtgactagaactctcttccactgtag a score=2062 s hg17.chr15_random 356543 199 + 784346 tgaaCTtatatttgtataatgatatagtatatagcaatgag----aacctaacaaattacaactatatgcaaaaagattaacaaatcttataaactaaatattgaatgaaagaagcaagatacagaacatattctacgatctaattcactaaaaattgtaaaactcatcag--------ttatgtt-------ccaaatcaccataagagcgatccta s mm7.chr14 9274090 201 - 119226840 TGAGATAATATT-----AACGGTACAA-AGAAAACAGTGGGGTGAAATTAAATAAAATACAACTACAT-TAAAAAGACTGAGAAGTTACCCAGCCTAAA----------ATAAAGGATGACGCAGGATGTACTTTATAATTTATTATATTTTGAAGAGCAAACACCTTCAAAATATTCATTGTATTTTCAAGACTAAGTCACCTTCAAAGACATCCAA a score=1669 s hg17.chr15_random 356751 132 + 784346 gtctagaagaagtaataatataaaatttcctgacttgagtactggataca-cagaagggctaagtttgtttaaaaacaaaagaagtattgagctgtacagttaagatttgggtattttactgt---ttgtatgtat s mm7.chr14 9274814 125 - 119226840 gCCTTAGAGGGGAACAACTGTTGACATTCTTGACTTGGTT--TTAATAAATCAAGAGTGCTTA------TTACAATAAAAAG--GTATTGAATTA-AAAGGTGAGATTTGGGCACCCTACTATAAGTTATACATAT a score=7463 s hg17.chr15_random 356983 320 + 784346 ACCCACACAGGT--ATTTTTAACAT--------------------GGATGAAGTGGTTCTGTCATCATTAAATGAGTACTTTAGGATGCAAGTCTGATATAAAAACTTACTTCCCTGAAGACTTTAATTTTGCATGCAAAATACACGGTTTCTAAATTAAATTT--TTTTGTAACAAAGCGTTTTTGAGTTCCCCTCATGGAATTTTAATAAATCATTAATTTCTTCTTTTTCTCTTT-CATGCACAAGCAGTGGATAAACATTTCAAAGATCCCTACAGAAGTTTCTTCCCTTGAAATACTGTTCACATGACAATGAGAAGGATGGAATAAAACACAAAAAAGG s mm7.chr14 9275174 329 - 119226840 ACACACACAGTTTCACTTCTAACATCCTGCCATAGATTCGTGGCAAGAAGAAATAGTTCCATCATCACTAAACAAATGATTGAGGATTCCAGTTTGATTTTAAAACCT--TCCCCCATAGAC---AAATTTAGATGCACAA-ATACGATTTCTAAATTAAATAAAACTTTCTAACAAA-TGTGTCTAATTTAATTT--TGAAATTTCTATAGGTTGTT---TTTTTCTTCTTCTCTCTGAATGTAACAGTAATGAGAACACACTTCAAGAATTCCCATGGAAGTA-ATTAATATGAAAAAATG---ACATTTCATTAAGAAGAAGAGAACAAGGCACAAAAACAG a score=10149 s hg17.chr15_random 357613 465 + 784346 TTTTTCGTTGGGGAAGTAGTAGACCAACCATCTGTGCTTATTTCTTCTAAACAGAGCTGGGAATGAGTGACAGCAGTTGAACAGGAACACTTGCTCCCCAAGCACTACTTGTTTT--TCATGAAG---AAGGAAAAAAGGCAAAAGCCCTGCTACATTTACATTCGCA--------------------------AAATTGTTTTCAAATGAGGATTAACAAGATGTTAGTTCCCTCTCTGTT------------------------GAACACATAAA---ATAT---------------TAAAAGGCA--------GTGCTAATACATCTATATACAGCACATCAGGAGGAAGGAGGAAGTCATTTCTCCTGACTTTACCAACTTGTCTTATTTGAAACTGATACCGTGCCCTATTGGCTGATAGGAGTTTCACTTTATTTAGAATACAATAGAATTTGGCTCAGATTCACACCAAAAGTATAGTATTTTGATGTGCACTTACACGATTTCAGGGGAAAACAATATCTGGAATGTGACCCTGGAAT s mm7.chr14 9275509 529 - 119226840 TTTTTAAATATAGAAATAAAAGCCCCACCACATGTGCTGATTTCCTCTCAGCAGGAGTGGTAATGGATGCTAACAAT-ATATTGGAATATTCACTTG--AAGGATGACTTGTTCTCATCATAAAGGACAAAGACAAATACCAGACACCTCCAAacacacacacacacacacacacacacacacacacacacCCCAAAAGACT---AAATAATGATTAACAAGATTTCAGT--CCTCTCTGTTCTAGATataaatgaataaataaatgaataaataaataaatataaatgaataaataaataaatGGCATAAATGAAATGCCAACAAGTCTATGTGCAGCGCATCACTAGGAAATAGTAACTTGATGG--CTGACTTGACTGGCAATGCCTACTTGAAACTACTGTCATAACCTATTGACTGGCAGA---TTCTGATTTTGTAGAATGCAATATAATTTGATGCAGATTCATTCCAGAATTATAATATTTTGATATATAGTTACACAGTTTCACATGAGAA----GTCCAGAATCTGACTCTGAGAT a score=19500 s hg17.chr15_random 408116 912 + 784346 GGTGGGAAGTCCTCCTAAGAGGAGGGGTCAGACTGGAAGCTA-------CACAAAAAGAGGCAGAAATGTCCCTCCGCCTCTTAATCGGAGCCTGGGGAAACAAACACACTCGTGCAAAATCTCCAAAGAGGTGAGCTCTTCACCCTGTCAATTTTATCTGCCTCGTGAACCCCAGG--------GCTCAGGCTCCAGGCCCGGGCTAGCTCACACAACAGCAGAAGGGCCTTAGGTCTGGGCACTGAGCCAAAAAAAGGGAGGCTGTGGTCCCTGCTTTGGTTACCCTGCCGGGTCTGAGCGCCAAATCGGATC------TCCTACTTCTCTCTCCCTCCCTCCCTCTGTTCCTGGACTGGGGGCAGGCCCTTCTGCTAACAGAAAGCCTTCCAGTCGGAGAAAGCTCTGGCAGCCTGCCGCGATAAAGGGCCCTGGGGGCGTGAGGAGAGCAAGGGGCTCAAAATCAGAACCCAGCGTGACGACAGTGCCTCCATGACTGTGCTCCCGCAATGCGCAGGCTCCATGTCCTGGCGCCCGCCCGCCCATGGACCCGGCGGGGG--CTTCCAGGCTGGGCTCAGCCATTACGCCGGCGTGCGGGGGAGGAAACT----CGCCTCCCGGGCACTCGGTTGTCTCCTGCCCCCGCCCCTCCCTCCGATCC-GGGCCCATCTCTGACGTAGTGTGACCTTGCTCATCCCTTCCAGGCTGTGGGCCT---GTTTTCCCTGTGCAAGATGAGGGTCCTGGCTGTCCTGAGGACGCTGTCCGGG-CGCCGCCAG-GGGTGACCGAATTCAGCTCTGCTAAGACTGTTGGGAAATGAACTCCC-TGTCGGCGTGTGGCAGCCCGCCTGCGCCAAGCGCCACAGGAAAAGGGGGCGCTCCTGTCCCTTTGCCGCCCCCCAAAATTTTTCTGGGAACGGA------ATCCACTGACTCGCCC s mm7.chr11 68105573 829 - 122091587 GGTGGGAAGTCAGCCTAACAGTAGGACTCATGGGGGAAACTAACAAAAACAAAGAAAAAAGCAGAAGTCTCCTTCAGTTCCTTG-CCAGAGTCTGATGAGACAACCCGGTTTGTGCAAAGT---------GTTGGGCTACTCAGCCTTACAGTCTCTCCAGGCCTGTGGATCCCAGGCTAGGGGAGCCCAG-CTCTAG-CTTGGGCTAGCTTGTACACTGTGCCCAGGACCTTAGATGTGAATACTGAGC-AGAGAGAGAAAAAAGGCAATCCCGCTTTTGGTTACCCTGCCAGTTCTGAGGGCCAAATCTCACCAGTTTGTCCT--CTCTCTGTCCCTTCCTCCCTCTGTTCCTAGACTAGAA-TGGGCCTTTCTGCAAATAG----CCTTTCAGTCCAAGAAGGCTTTGGCACCGTGCCGCAATAAAGGACTCCGGGTGCCCCGAGAGTGCAAAAGGACAAACACCGAGCCCAGGCGTG------GTGACTCC---TCTATGCTCCCTCAGTGGGCCGACTTCC--CTCTGGTGTC------TCTATAAAGGCCACAGGGAATCTTTC--------------------------------GAAAGGACACTAGAACGACTCAGGGGCCCGTGAT---------------CCAGCCCTTCTAATCCAGGGCGCGCCTCTGACTCAGCATGACCTCGCACATCCTTTTCTGGCTCCAGGTCCACAGTCGCCTCTTTGCAAGGTGAGGATCCT-GCTTTTCCAAGGACGCTTCTCGGGCCGCCGCCGTCCCGTGATGGACTACGGCCATGCTAAG---GTTCATAAGTGAGTTCCCACGCTGGTGTGTG--------------------------TGAAGAGGTGGCGCTCCTGTC---------CCCCACACAGGTCTCTTGGGAGCGCAGACTTGATTAACTGACCGGTCC a score=20688 s hg17.chr15_random 410402 924 + 784346 agagacactcagtggg-------gtcgaatgagggttttgttcccatagtagaggcttgaacacatttacaggccaatgggaaagatccagttgagagcgggtagttgagccttcaggag----------------------agaaaagggatgttccatggggcaaactcct-------gagaagggggaggagatggaaGGAAGCT-----------------------TCTGTGGATGTAGCAGATGCAGGAGGGTTTGTGTA--GTTTTAGCCGGGCTCG-AGCCGGTGGCTGACGCAGGCAGGAACAA-TGGCTCACCCATGTTTTATGTGT-ATTTCCGTGTGCGTGCTCCTGCTTTCCCCAGGTCTGGGCCGCCTGCCTGGCCCGTGT-GCCGTAGGGAATATCCACACTGGGCCTGGG---------CGGAGGCTGGGCATCTCCCGCTCTGGGCT-TGCTCCCTGATGAGATTCTCAGACCGTGCTTCCCCTCATTCATG-AGAGGAAGGTTCACAGAGCAGGCGTGGGAACCTGCCTGGCCGCCAGGGCCTCCTCCCGCTCAGGCTGAGGTTTGCTGCATCTCTGTCCTTATTCCC-------TTCCAGACTGGATTGGCTGAACCAGGTGTCCACTCTTTTTGGCCCATGGCATAAAGAAGGGTTTGGGCAACCCAGTGTGCCCCAGGTTGTTACCGCCCCCCCGCCTCCGCCCCCACCCAGCCTTTGATGGGCCCCCTTCTCATCAATCCATCACCCCTGCACATGCCACCAGGACTGCCTGGACCAGAGCCCGGGACTCTCTGAAACCCACTGAGAGCTCGGCCCTGGGAATGGGCCTCCCAATCTCGGTCTCCAGGGGGTGGGC------CCCAGGTCCCTAGTCTTCCTCAGGGTCTTCTCCACTGTTCTGCCTCCTCTCCTGATACCCAGTTCCTAGCCGGGGTGACCCCAGCCTCCCGTAACAGCCTCCTTGTGGT----GGTGCTGGGAAGAAGGGGCC s mm7.chr11 54056613 909 + 122091587 AGAGATGCACAGTGGGTGGTAGAGTGGGGTGAGGGTTATGTTTCCATAGCCATGGATTGAAGGTATTTATAGGCCAATGGGAAAGATCCTGTGGAgagggggaggaggagg----aggaggaggaggaggaggaggaggaggaggaggaggagg----aggaggaggaCCACTCCGGACAGAGAAGTGGGCGGGCATGGGGAGGATCTGAGGATCTGGGCAAACTGTACTTTCTGTGG-CATAGCAGATGCAGAAAGGTTTGTGCATGGTTTCAACTGGGCTCTTGGCTGGTAGCTGCCACAGACACGGACAAGTGGCCAGGTAGTATTTTCTGAGTTGTTTCTGTGTGT------CTGTCTTTCCTAG-TCTGGGCCGTCTGCCTGGTCCATGCCATTATAGGGAA-ATCCACACCAAACTCCAGGCACAGTCCCACAGGCCGGGCATCTCC-GTTCTGGGCTCTGCTCCCTGATGAGATTCTCAGAC--TGCTTCCCCTCATTCATGGAGAAGCAAGCTTACAGGGCAGGCGTGGGAACCTGCTCAGCTGCCAGAGCATCCTTCAGTTCAGATCGAGGTCGGTTGCTTCCCTGTCTTCTTGACTGTGTGTGTCTCAGACAGAGCTGGTTG----AGGTGTCCAATCTCATTGGCCTGTGTTATAAGCCATAGGTTG-------------GCCCTAGGATGAGA---TGCTCCAGGCTACGC---------------------------------CAACTTCTCACATTTACAGAAGAGCCGAAGCCTGGCT-------AGCCTGAGCCCCTCAGAGAAGC------AGTTAGGCTTTGGAGATGGGTC-----ATCTGGAGAG--ATGAGGTGCGCTGACATCTCAGACCCTTGTCTTTTCCC-----TCCCTCCACT-------CCCCTCCCAGGATACTCAATTCCCGATCTTAGTGACGCCAGCCTCCTG---CAATTTGCCGGTGGTAATGGATGTGGGGGTGGTGGGACC a score=42687 s hg17.chr15_random 411467 1419 + 784346 TAATGTTAGCCTTCTCAGTAACACAGCCAGTGTGCCCCATGGGCATCTGAG-------GGTAGGCTCCACACACCAGATGTCCACACCTTAGTGCTCAGCACAAGGCCAGACACAATGTCTGATGACCGCTATACCGTGCTGAGGGAAAGGGATAAGGGACTAGCAGAGGCCA-----CTCAGGTTTTTC-TTGGGAGGAGCATG-----------------------------AGGCAGAGGAGGGACTAGCAGCAG--------GGAAA-------TCCTACCTGCCTGACCAATAGCAGGCAACAGCTCCATGAGGATGCTCTCCTCAGAAGAAAGGTGTATCCTGAC--------CCAGGTCCTTACCAGATGTGAAGCAGCAAA---AGCGGGAGAAGTGTGTGTGCATCCTCATTCCTGGAACTTAGAAAACCTGC-CACTAACCACGCAGGGT----GCTGAGGG----GCTACAGCCCCTGCCTGCCAACTCACCCTGTGCTCAGAGAGG--------TCCCTGAGGG-CCAGGGCTTCCAGCTGGGGTTTCGCCTTCTGTGCTTCCTTGCACCCAATGAGCCTCAGGAGGCCATCTGCTGTCT-----TAGAGAAACTGGGG-CCTCAGGAAAGGACCCCAAACCTCACAAGTATATGGTACGGCAGTACACCTCCTGATGCCTCCAGAAGTCTGTGGCCAGGGAACAGACAAGATTTGGCCCCGCCCTGCCCAGTAACAAGGTCCCTCACACCCCTCCTCCCATGCCTGGCAGGAAGGTGACTCAGGCAGTGCGTCTGGGTAGCCTGGGGCTGCGCTTCCCCCAACGCAACATCTAGGTTCTTAGGAAACTTCATTTGTTGTGAAAATCGGAAATGAAAAGACAGTTGGTGACAAA---CTCCTTTCTCCATCACCTCCTTATTGGACAGAAACGACCCAG----GAATGCGC------------CTCGCGTGAGTCCTATTCTTTCTTGGGGTGCACACCCGCTGCTGGAAGTATGAACAGCAGGTTTGAGGGGGAGGGGAGCGCTGACCCGGGCACTGCGCAGGGAGTCTCAAGGGGGGCTGACGCAGAGGGAGGGTCAGGCACTCCCGG-GTCAACGGTCTCGGC-CTGGCACCCACCTCGGTCACGACGGTGGACAGGTAGACGTCCTGGCTGAACTCCCAGCCATCCAGGCAGCTCTCCTGCTCCAGCTGCCCCAGGTCCACGTCGCGCCCCGGCTCCAGCCCGAGCGCCGAGAAGTTGGCGATGGTGGCGAGCCGGTAGCGGCTGCAGCTGTGGGGCACCTCGCGGCCGTCCCGCAGCCGCAGCGGGACACTGTTGTTGCGCCAGGCGCTGCTCAGGTTCGCGGCGTCCGGCACTCGACAGCGGTGCTCCGGGGTCCCCGCCAGGAACACGACTGACATACCATTGAAGCCATTGGGGATGATGCTGGCGCTGAGCAGGAAGAAGATGAGGCGCTGGAAGGGCCCCCACTCGCCCAGGAAGGCGATCACCTCGTCG s mm7.chr11 53983338 1384 + 122091587 TGACATCAGCTCTCCTAACAACACAGCTGGCATGCCC-ACAGGCATCAGAGCTCTGCAGGTGGGACCCACACCCTAGCTGTCTACACCCTGG------------GGCCAGACACATTTTCTGTTGACTGCTCTGTAGTGCTGAGGGAAAGAGATAAGAAATT----GAGGCTGTTGTTCCCAGAGATCTCATTGGGAGGAACCTAGTTGGTTTTTTGTTTAACCAGCCTAGGGAAAAAAAAAGACAGACCAGAAGCAGCAATGGTGGGAAGGCAGATTTTCTACCAGCTTGACCAACAGCAGGTAATCAGTTCTGGGTGATGCTCTTGCCAGAAACAGTGCTTGTCTTATCTGTTATGACCTGGTCCTCAGCAAATACGCAGCAGGAAACTAAGAGGGAGTAGTAGGTCCACATTCAGACTCTGGTGACTTGGGGAACCTATTCCCTGATCACTTAGAGGTAAGGCAGTGGGCTCAGCTGGAGCCT-TGATCACCAGCTTACACTTCCCTCAGAAGTACGGGTCTTTCCTTGAGTGTCCAAAG------GCCAGGTTCTAGTTTT----GACTCCTTACATCCAACCAGTGTCAAGGAAGGGGCTGCTGCCTCTTTTTCGAGAAAGTGGGGGCCTCGACATAGAGGCCCTTCTGTCTCAAG----------------ACCCTTCCT----------------TGTGTCCATC-AACAGACCA-CTGTAGCCATTCTCTG--------------------------------------TAGCAAGGAAATAGCTATGACTATAAATCAAGACAGTCTGG---TTTGGCCTGCCCAGGGAAGCACCAGGGCTCTTGGGAAACTC----TGTTGTGAAACTCAGAAAGGAAAAGGCAGTTGATGACAACACTCTCTTTTTTTCATCCCCTCCATGCCACACAGAAATTCATCAGCTCTGAGTGTGCGCTGAGAATACACTCAC---AACCCCACTCT--------GTGC----------CTGGAAGT------------TTTGAGACAGTAGGTGACACTGACCCAGGCACTGT-CAGGGGCTGTTG-GGGGCACGGATGCA-ACGGAGTCTC---CATTCCCAATGTC--CAGCTCCAGCACTACCACCTACCTCTGTCACGATGGTGGACAGGAAGATGTCCTTGTCGTACTCCCAGCCATCCAGGCAGCTCTCCTGCTCCAGCTGCTCCAGATCCACGTCCTGTCCTGGCTCCAGCCCCATCGCAGAGAAGTTGGCGATGGTGGCCAGTCGGTAGCGGCGGCAGCTCTGAGGCACCTGTCGTCCGTCCTTCGTCTCCAAGGGGATGCTGTGGTTGCGCCAGGAGCTGCTCAGGTTCACAGTGTCAGGAACCAGGCAACGGTGCTCGGGGGTCCCCGCCAGGAACACGACTGACATACCATTGAAGCCATTGGGGATGATGCTGGCGCTGAGCAGAAAGAAGATGAGGCGCTGGAAGGGCCCCCACTCGCCCAGGAAGGCGATCACCTCGTCG a score=39504 s hg17.chr15_random 417137 1775 + 784346 CCAAAGGGTAAGCTAAGATAATAATTCCTGTAACTGT---GGTGTTGTTAATagcaaatgttttttaatgccttgtgtgtgccaagttctctgcggggtgctggagagacacaaataaataagacagacacagcctctgcccttatggaTGATACCTGGACCC-----------ATCCCTGAGT---------------------ACTCAATACGTACTTATGCAGAGAA-GAAGAATGCATGAAATAAGCAGTCTGATTATTCCCAGCAGCACAGACACCTGATGGGTGTGCAGTAAATACGTGAAGGCCACTAGGGCAGGGGTGATGTGTGACCTGGCCACCACACATCCCCACCCTGAAGAGGGCTTCCAGACCCTGTGACTGCCTTATGACTTGGTATTCCAGCATGATAGGGTCTCAGCAATACAGCAATCTCCAAGGACCAAGGCCATTACAGGGGAAAAGGAAATCTGAGGGCTTC--CTTAAA-----GAACTTTCGGGAGAGCTGGAGAAGCCATAGAATCTGCAGCTTGTCTGACCTGCTGCCTAGAACTCAGGGTACCTTATGAGTGGGTTTACAGCATGGCCCCTAAGAAGGGCCACCCCCAAACTCCAGGTACAGAACCTGACCTGGCATCTCCCCTGTGGGAAGGCACAGTCAGAAGTAAGCCTCTGATGTTCTCTTAAGTCAGGGATGTCAACATGAGCTCATGTGAGGGA-----ATGACTGGCCTGGACCCGGATCCTGCATCATTCCAATCTGTCCAGATGCTGCCCAATGAAATGGGGAAGTTTATGGACCAGATTCTAAAAAATTCATCCAGAGTCCCCACCCCACCTCCACCTCCAAACTTGTGATAGAAGCCTTTGGAGATGGATTACACTGCCCAGAGACTCAGGGGCCAGGAAGGTCATATTCAGGAGGACCACTTCACATTCCCCCGGACAGAAGTAAACGGGTAATGAAGGAATTTCAGGATGG---AGGCAAGGAGTGTAGGCAGTCTTTGGGATGTGAAA-----TCGGGGGAAACAAGCA-ATGTATGAAGAGGAGTTTCAGGAATTCACTTTGGGATACATTGGGT-GGAAGCTTCCACAGACCCTTGAGGATC--------------------------CCTTCCCCCCAGAAAAGGTCTGCACTGTTTACATTCACTAGGACTCTTG-GAGCCCAGCTGACAGGCCTCTGACCACAAGCCATGCTGTACACCAAACCCTCAGGACAGCCAGTGATAAGTGATGGCTGCCCCTTACTCTCTACCCCATTTAGTAGGGTCTAAGTCCTGGGGAGCTTCTGGCCTACAGACCTCAGAGAGACAATGCAGTGACCAGCTCTCCTGCTGGCCCTTCC---ACCTTTCTTCACTTGGGATCCAAGTCTGCAAGGGGCTGAGCAGAAACCTCCTCCACCACAAAGTGATGGAGAACAGCCCAATGGCTG-GTG---CTCTAATGGATTCAGACACCGCACCCCCCCACACACACACACCCCAAATACACTCCCATATAAACACCGCTACCACACACCACTTGTTTCTCTCCCAGCTGAACAGATAGCAGCATCTTGCCTCCTACAGAGGCACCC---------ACATTCTA--------CTCTGAAGGGCCCC----TCCCTTCCTTGGACTGCCCTAGGT------------------------------------------------TTGTGCTTCTCAAGCAGTTCTCCTCTTTGCGGGTTGTCAGAGACCCAGTGGACACATTTCATCCCACCACCTGTGAGGA------------GCCCAAGAGCAGGGTC------------CTTATCACAGCTTGACTAAAAGGACACATAAGGTT---AAGGATTTGGGCTAAATGAGA---GACCTCCACAGAGTCTGGAAAAGTAAAAGGTGTCTCCCTGATGTAGCCAGA s mm7.chr11 68063112 1780 - 122091587 CCAAGGTCTAAGCTAGGATAATGACTCCCATATCAGTTCTGACATTGTTAATAGCAAATATG----AATACc----------caagttctctgttgggtgctggaga---------aagtgagacagacacagttcttgccct-----atggtgcctcaatcctagACCTTGGCAGCCCCAAGCCTTGGCATATGAAGGCCGGCCACTCAATACATTTTTGATGAGTGAATGGGGAAGGTTTGAAATGAGCAGTCTGCTTACACTCAGCAGTCCATGTGCCTGA------------AGACATATGAAGGCCACTAGGGTAGAGGTGAGCCATGACC-AGCCACCACCCATCCCCACC-TGAAGCAAGCCTCTAGCTTGGACAGCAGCCTCGTGACTTGCTACATCACCACCATAAAGATTCAACA---CAGCAATCCTCCAGGACCAAAGCCATCAAGACAGGAAGGGAACTACAAAGCCTTCAGCTTAAGCCTACAAAGCCTTAGTCGTGTTGGAGGGGCCATATGACCTGACACTGAGTTGACCTACTGCTCCAACCTCAAGTTAACTCAGAAGTAGCCACACTGC-----------TAAGGACTACCCCTACCCTCCAGGACCACAGCCTACCCAGGCCTCTCTCCTATAGGAAGGTGCTTTTAAAGGTGGGCTGCTGATGCTTTC--AGGTCAGGGATGTCACCAAGAGCCCACGTGGATGATGACAGCCACAGGCCTGGATATCTATCGTGCATCCTTCTAACCTGCCCAGGCTCTGCACAATG-----------CTGATATAGCAGAATCTAGAA---CCATCC----TCCCCACTCCCCCCTCATCTCCAACCCCGTGAGAGAAGCCTCTGAAGAAAGAT----------------------GGCAGCGAGGTCATCCTCAGGAAGGCC--------CTCCTCC----------AAGAAAGTAATGTGAGTATT-CAAGATGGGAAAGACAAG------------TCTTGGGGAGGTGCAAATCAATCGAGAGAAACAAGAACATCTGGGAAAAAAAGTTCCCAGAATCCACTATGAGGTGCATTGGAAAGGGAGTTTCCACAGATTCCTGAAGAACTATGTTCGTCTCCCCACCACTCCCCACCTCCCCTGCAGCAAGGTTCATTGCTGTC-ACATATACTGTGGCTCTTGAGGGTCCAGATGAGAGGTCTCTGACCACGGCCCATGCTCTACATTCAACCCTCAGGACAACCAGTGGT---TGGTGGTTGAACC---CCTTCTACTCCACTTAGAAGGATCCAATGGCT-GGGAGCATCTGGTTGCCAGCCCCC--AGAGACCATGCAGGGACCA----TTCTGTCGGTCCTTCCCATATGCCTGTCAATGTGGGACCCCTGTTTGCATGAAGCCGAGCACAAA---CCTCTGCCACACAGTATTGCG----AGCCCAACATCTGTGTGTCCCTCTCA------------------CTCTCCACACA-------CTCAAGCATGCATCCGTGT-CACACACTCAATCCATGTCAC----TCCTCTCCCACCTGAGGGGATAGCAGCACCCTCCCTACCAGGAGGACATCCCGGCCTGGGACCTCCTACTTGGTACCTCTCAAGCGGCCTGGGATCTCCTACTTGGTACCTCTCAAGTTGTCCTACTCTTTGTCACCAGGAAGACATCAGGACAGACACCCCTACATTGTAGCTCTCTGACAGTTCTTCTCTTTTCCAGATGTAGGAGATTCAGTGGTC-CCTCTCATCTCTTACCCTGTGAGCATCAGCATCACACACACACAGTCCGAGTCACTCACGTGTCACATGTCACAACAGGG-TAAGAGAGAACACAGGGTTGCCAAGAATATTGACTAACTAGGATCTTGCCTCCTCTGGGTATGGAGAAGCAATTGATGG----CTGATGTGGTCAGA a score=11878 s hg17.chr15_random 419014 392 + 784346 AACAATCTTCTAGAAGAGATCACATAACACTGTTACAAAGGATCTGGAGAAAGGGACCCTGGCTTCATCACTGTGGCTCTCCAGTCATGCTTTACATTTGGCAGTGACTATCTCCATTCAACTCAATTCCCTAACCCTAAACTAGCTGACATTTATCAAATACTGCCCTTTACCAGGTCTAAGTAAGTTTAACTCCCCCCACCCC-----CACCAAAAAAAAATCAAGATACTAAGGGATAT-ACTATTCACAAAAGGGAAACCTGTCTCCTCTTCATATACCTGTTCCTTTCAAGGAAGGGTATAAAAATGGGGATGAGGGAGGA----TAACCACTAGGAATTTGACCCTATATTATAAATTGGTCAGATAAATGAAAATAATTCCTCTGGACTCAAAGt s mm7.chr9 68641680 369 - 123828236 AATTATCTT-TAGAAGCTATTAGAGACCACTATTACAAAAGCCTTGGGGTAGGGG---CAAGCCTTGTTG-TGTTTCTCTCCTGTAATGTTTTATAGTTAGCATT--CTGTCTCTACTC----------CCT--CCCTCGATTACCTGACACTTATCCAACACTACTCCTTGCCAGGTCTAAGT----TTAAC-ACTCCCACCCTGCAGACATCACCAAAAACT-----TACTAACGTATACCATCATTCATAAAAAGGAAACCCA-AGCCTCTTCATAATCCCATTTCTCTCAAGAAAGTGCATTAAAATGGAGATAGAGAAGGACAGATAACCACATGGAATCTGACCCTGTATTATTAACTGGTCAAATAAATGAAAACAATGAGTCT---TTCTAATC a score=15067 s hg17.chr15_random 420121 560 + 784346 TAAAAGTACCACTGAGGTGCTTAATATGACATTTCTGATATTTCCCAATGCTCCTCCACAAATTCAATTTGGAAAGGTAATCTGTTCCAGGAGGGCAAACCAAAGAAAAAGTCCTAGGCTCCTGAGTCAAGGCTTGTTT---CTTTCCTTTGTACA-----AGCTGACTACTTTTTAATCATAGTAAAAATGAGAAAAATGCAAGATGAAGTTAACAGCATTGCTTTATTTCCCATGAAAAGCTGTTATAAAGCA----------TTCT-------------------------------CAAAATAAA-----CTGTTATTCAGCCACAAAT------------------GACACCATCACTTTTTTATTC-----ATAGGGCACAGTATCGCTGCCAAAGAGCTTTCCTCTATATGCTCTCTTGCAGGGCAAAAAATATTATCTATGTTATACAGAAACACAGTAAAAAAAGTGATTTACTTAAGGTCCTAACTACTAAATAAAAGCTAAACTACTCACTTCCTCCTAGATTCAGAGAGAGCTCCAACATTTTCTAAAATTTGGTATCTTGTTGTTGAGGTAGGCACTTTTTGGCAATAATGAATAGACATTTAATTAGCCAATCAAAAAAACTt s mm7.chr9 68642049 602 - 123828236 TGAAAGTACCATTTAGGATCTTAACACATCAGCGCTGTTATTTCCAACAGCTTCTCCATGAATTCAATTTGGAAAGGTAAGCTGTCACTGGAGAATAAGCTAAATAAAGATCCTTAGGCTCTGTGGTCA--TTTTGTTCATAATTTCCTTTGTACAACTTCAGCCGAATGACTTTGTATCAGTACACAGACTAGAAAAGCAAAGCATGAAGTTAACAGCATTGCCTTATTTGCCAAGAAAAGATGTTACAAAGCAGATAATTTATTTCCTTCCTTTGTACTGGGTCTTGCATACACTAGGCAAAGTGGAGTACTCTACCACTGAACTACCAGCTCAGAGTATTTTTAAGTAAAGGTTATCACTTTCCCATTTGTACAGTATAGTACAATACTGTTGACAAGAAGCTTTCCAATACATCC-------CAGGGCAAAGGGGGAC-----TGTTTTATGAAGAAACAATAAAAGAAA----TTATTTAAGATCCTAAATATTAAGTAATGCTTAAAGTTCTC----CCTCCCAGATTCAGTG------CTAATATTTGTT--AATTTAGTAGCTTGCTTTTGGGAAAGGTGTTTTTTAATAACAAAGAATAGA-----AATTAGCTAAACAAAAAGTATT a score=60386 s hg17.chr15_random 421227 1610 + 784346 GTTGTAAGGACTATTTGAGAAAAACAGGGCATGTAAAGCCCCCACAGGAGGCTGGGCATAAGGTGGTGCTCACTACAGGGACTGG--------AGGGAGCTGTTACCAACACCCATTAGGGTAGGGCCTGGCACACCCTGGATGCTTGGCCAAGGCCAGCCATCATTATAGCTTGT----GGGGAAGGAGCCCCGGATGATGTTCTTGGGACTCCTGGAGGCTTCATGGGCTGAGATTGCAAGCCCCCAGCCCTGCCGGGCCGATAGCCTCCTCCCTGTCTGTGTGAGGCTGTCCCTCCCTACCAGGTCCCGCGTAGGGGAGGTCCTGGAAGCAAGGGAGGGGCT-----------------GGATCTTGAGCCCCACTGGTGAAGACACTCCCAC--ATATCTTCAGTCCCTGTAGACCTGCCCCAGAGGTACCTGCTAGGCAAGCTGTGGCCTGTGCCTCCCCAGCGCTGTAAATCTCCCCAGATCCCACCCAAACCCAACCTCAGCCATCCTGGCTCCTTGGGCCTGAGCTGCTGCCGCGTGACTTTGGGGGACAAAGGAGGCTCTTCCTGGCAAACCTTCTCCCAGACTGCCTGCCTGGGGCCTGCATC--------------CCCAGTCAGCTCCAAACAAGgctgttgctgctgctgctgccgcagccgcagctgTGACGTGTGGAGGCCTTTCCTCGGAGGGCAGGCAGCCGCGTGGGCAACAGATGTCTCAGCTCCCTGCCGCCTGCAGCCGTCAGCCGCCGCCACTGAGCCTGTCAGCGGCCTCACGCCCAGGGTGCCTGGCCAGCCCGCT----TAGTGTCCCCACCAGCCCC-CTCAGCGGACACACAGCATGACACACACAAGCAGACACAGGCTTGCGTacacacacacacacaca-cacacacacaGCAGGAATCCTATAGGAAAG--AGGAGATGAAAGGCTCTGGGATGTGTTGAAGGCCCACCTCACTCGGCCCCAGGGACCTGGCAGTGAGGGCAGATGTGGGAAGCCTCCTAGGACAGCTGGGCCTGCCTGTCACCCTGGCCCCCAGAAACGGGATTCCATGATTCCACGCTCCACCTGGTGCCCACCCCCTCCCAAGAACTG-GACAGAAGTCTCTTAAAGCCCAGCCGGCTTGGCCCAGCCCCCATGGCAAGAGGTGGCAGTAGGGTGGGGGAAGGTGCTTCTCTGTGCCTCTGACACAGGCCCCCAAAGACAAGATCAGCCTGTGTGGGAGCAAGGGATGGCCGTCAGATGGTTTCAGGTTATCTCCTCTGCTCCTTCCAGACTGAGAGCCGCCAAGGGCAGGGCCTGGGTTCTCTCCTCTTCTGTCCCTTAGGCTGGGGACCCCCAAGGGCAGGGTCTGAGTCCTCTCTTTTGGCCCTCCAGACACGAGGATGTCGAGGCTGGGCCAGGATCCTGTCTCCCCTAGACAGGCACCCCCTCGAACAGGGCCTGAGTCACCTCCTCCACTCCTCTATCCTCAGACTAGC-CACGCTCCAGGGCTGTGCCGGCTCCTTTT--------CCTT--CTCTGTGGGCAAGGCAGGGCCCTGGGAAACTTGAGGAACGGGCCTGAGGCTGTCCTGGCCCCCGGCTTTGTGTCATCTTGTGGGGAGGGGTCTCACAACCTCACAGTTAAGTCTCCCTTTCC s mm7.chr11 54023569 1496 + 122091587 gttttggggactTCCAGTGACAGTCGTGGCATATGACATCTCTACCAGAGGCTAGGCATGCATCAACACTCTTTCCAAGGACTGGCTGCAGGGGAGGTGCTGCTTCCAACACCCGATAGGGTGGGGCCTGGCACATTGTG-ATGCTTG---AAGACCAGTAGTCATTACAGTTTGTCTATAAGGAAGAAGCCCTGCACATTATTCTTGGGGTTCCTAGACACTTCCTGGGCCAAGACTGTAAGCTCCCAGCCCAGCTTAACAATCAGCCACC-CACTGTCTGCATGAGGCTGTCCGTTTCTACTGGACTCTGGGTAAGGGAGACTCTGGAAACATAGGAGGGGCTCTGAGAGAACACAGAAAGGATCTACAAGCCCTTTCGTGAGGGCACCCCCACCTATATCACCAACCCCTGTACTCTTGCCCCTGAGGTACCTGCTAGGCAAGTTGTGGCCTGTACCTCCCCAGCTCTGTAAATCTCCC-AAATCCCACCCTAACCCAGGCTCAGTTACCCTGGCTCCGTATGTCTGAGCTCCTGCCACATGACTCTGGAGGAAAAAGGGGATTCCTC-----------TCTCCCAAATGGTCCATCAGGGGCCTGCATCTCCTCCCACCAAGTCCCCATCAGTGCCAAACAAGGCCTGGGCAGCCTCTGCTG-----------------ACGACTGAAGGCCTTTCCCTGTTGGACAGGCAGCCGCGTGGGCAACAGATGTCTTAGCTCTCAGCCGCCTCCAGCAGTCAGCCACGGCCACTGAGCCTGTCAGCGGCCTCACACCCAGGGTGCCTGGCCTGCCGGCTGGCCTAACACCCTCACCGTTCTTTCTTTGTAGATACACAG----ACCCAC-CAGGCAGACATAGATGCTC-TGCCCCCCCCCCCCCACTTCCCACCCCCAGCGGGGATCTCTAGGGAGAACAAGGAGATGAAAGTCACAGGGATGTGCTGAAGGCATACCTCACTTGGCCCCAGGGACCTAGTGGTAAAGACAGATGTTGGAAGCCTCCTAGGACAGCTGGTCCTGCCTGTCACCCAGGCCCCCATATAGAGGATTCCACAATTCCACAC-CCACCCAGTGACTACCTCTTCCCAAGAACTGAAAAAGAAATCTCGAAA----------GCTTAGCCCAGCCTTCAGGGCCAGAAGAAGCAGCAAAGTGG----------TTCTCCAGTCCCCCGACACACTTCCCCAAAGACTCAAGCAGCCTCTGTGGGGTGAAGGGATGTCCA----------------CATCT-GTCCCCTCCTTCTGGACCCAGAGCCACTAAGGGCAGAGCCTGGGTTCTCTTCTCTTTTGGCTCCAAGGCTGGGGAATC--------------------------------------------------------------------CCTGCCTC-------------------------AGGCCGGAG----CTCCTCC-CTGCTCTATCTTCAGACCAACTCCCTCTCCAGGGCTGTGCCCCCTCCTCTTTGCCTCTGCCTTAGATCTAGGAGCAGGGTATGATCCTGGGACCCGTGGGGAACTGGGCTGAGGCTGTCCTGGTCCATGGCTTTGTGTTGGTTTGTAAGGAGGGGGAACCATGCCTCATTGTC---TCCCCCTTGCC a score=13959 s hg17.chr15_random 422939 648 + 784346 CCTGTCTCCTGTTCAGGAGACTCAACATCTGATTGTTTTCCACCTCAGCCTGGAGCTGTCTTCCCACACTCTCTAGCTCCTTCCTTAGGTGGTTGGTCTCATCTTGTAGCTGCTCT---ACCTTAGATGGCCCTGCTGGGGGCTCTGGGGCCAGGGGTTCAGCTGAGAAAGCAAGCAG--AGAATAAGGGCCTCTGGATTCTCAAAAAAAAAAAAAAAATCCTCCCTTTGGTGCAC---------AGCTCCTCCTCTCAGGCTTCCCAAACTTGGCCTCACTGCTAATGACTCCTCACACCCGGATGGTAGACAATCTTCCAAGTCACTTTCAGATAG-------------AGAGCACTGTGGGTGGCTGACAATGGGCACTCctccctctttactgatggggacactgaggctcatg-gagatgacaagacttgtccTCC-------CCTGGCACAGACCTCTTTCCCTCTGCCTCAAAGCCCTTCCATCCACCCACCTCCCTGGGGCATTCTAAGTCACCCCCACAGCCCTCTAATGCCAGTCCAGCTGCCAGGTCATGCCAGCCCCATCTTACCCGTCTGGTTTTTGAGTTTGAACAAGCTCCTCCCAAGCTTCTGTACCAGATGTATCTCATGCTTCTTCTCCTCCTTAGATGTGCGAACCTGCCCAAAGCAAAGGGGG s mm7.chr2 150237211 620 - 182548267 CCTGCTCCCGGTTGAGGTGGCTCAGGCTCTCATTGTCCTGCACCTGAGCCCGTAGCTGTCCCGTCAGCCTCTCCAGTTCCTTGTGCAGCTGCTCGACCTCTCCCTGCAGCTGCTCTTCCGCCTCGGAGGGCCCAGCTGGAGGCTCTGGAGGCGGTGGCTCCTCTGAGAAAGGAAGTAGGCACAGTGAGGG---------------------------GGTCCTCTCTTGGCTCTACTGGGAGTCAGGCTCCCTGCCCCAAGCTC--------TGGCTTCTTTTCTGTCAGGGTCTCA------GATGAGCTA-AGTGTGTCAAGCTACTCTAGTATAGTTCTGTGGTGCTCAGTCACCTGCAGAGGTATAGCAGTAGGCATGCCACCCTGTTT---------TACACAGAGGGACATAAGAGATGACAAGGCGTGTCACCTGGTCAGTCCTGACAGAGACCTTTTGCCCCAT--TACAATGCTCTCACACCCCCTTGCCCCC--AGGGCTATGGAAG------CCACTGGCCTTTGA-GCCACTCCCGCTCTCAGGTCACCCTTGCGCTA-CTCACCCATCTGACTCCGGAGTGCGGCCAAGCTGGTCTCCAGCTCTTGTACCTGCCGTTCTCTGTGCTCCTTCTCTTCCTTCAGTGTATGCACCTGCCCAAGGCACAGGGGG a score=35001 s hg17.chr15_random 423619 1128 + 784346 TCCAGAGACAGAGTTTGAGAAAG--GCCCACCCCCCTTCTGCCAGTTTGTGATTTAGAAACGTGcattcattcaacaaacatttactgagcatgtacaggccaggtacagttcttcatagcagagatataaaacagcaaaggacagacaggag--cccttggccctgaggtttccattctaggggCCTTTAaatctctgact-ttcagagctaaccaagacctttgatactctctacctcctcca----gaaacacgagcataaagaggagagatggcttgtccagactcaaaaagcaaattagggactgaggcagggcagaaatatggacccctgacaaccagtcAGGCTAGTGCTTCCC----AGAGAGGTGACAACCCCAGGGCATGTGTGGCAAGGACTAGAGCAGGG-GTGTCTGGAGAAGAGAGAGTCAGCAAAGAGGGCAGTGCAGAAGACCCATGCTGCATGTTCTGTGCTCTGGGGTCCCTCCAGGTGAGACCTGGGTGCCCAGCTCCCCATTTGCCCTTGGCATCAGGGGCCCC-TAGCTCCTTTCTTCAGGGCCCCAAGAGGAAACTGGAGTCCAGGATTGACCAGCTGTAATCAGGGGACCCCACTGGACTCTTACCAGTGAATTGATGTTTTCAGTGAGTTGACTGATTATTGCGGAGCTTGAATCCAGGGCCACTGCTAGTTCTTGGTACTGGCTCTGAGGTGCATGCAGAGAGAAGGAGTTGGAGGAAGATTGTGGCGAGGGGTAGAGAGAATAATCATTAGGGCTGGTGGGGGTGTGTGGGCTGCCTCAGCTGGCAGAGGGGCAACAAGCCCCTGCTGTGGGAGGAGGTTGGAGGGCTGGCCTGCAGGGTCACTGCACCTCGGCCCAGGGCCTCTTACCTCCAGATCCTGCAGGGTAGTAGAGGATGCACGGCCCTCCCCGTAGATACCTGTTGCTGACTGCAAGAGATGAGAGTGCACATGGAGATGTTCTGTCCCCCCTCACTGTCTAAGCCCTCTGACTTCCTTTCTTCCCCCATCAACTGGCAAAAGCTTCTTTTCTGCCTATCTTGGACCCTTTTCCCCATAACTCCTTTGTGCCAACTTCTCTCGTGGTTCTTATCTCCCCACCATCCCACCCTGGGGCCC s mm7.chr2 150242557 1047 - 182548267 TCTAGAAACA-AGTGTGAGAAAGATGACTACCC----TCTGCCAACTTGGGACTTGGCAGAGTGTGTCGAATTAAAA--------CTGAGCGTGTCTTG--TGGGCACA-------------------------ACCAAGAGATGAATGGGAGAGCACTTGTTTCTGATGAGTCAAT-----GAGCTTTCCAACTCTTGCCTCTTCAGAGTAGACAGAGGTCTCTGACCCACTCCAAATCTGCTAACAGGAAACTCAAACCCAGGGAG------TGGTGTGGCCAAAATCAAAGAGCAAATGAGGGGCTAAGCCAATA---GGACATGGGGTCCTGACAACCAACTGGGGTTGTGTTCCCCTCTACTGGAGGCACCGAGCTCAGGACAAGTAGGGCGAGGACT----CAGGATGAGTCTGCAGTACAGAGTGGAGGCAGAGAGGAGAGC-CACAAGATCCATGCTGCATGCTCTATGCTCTGGG-TGCCTCCAGCTGAGACTCAAGCCCCAGGTTTTCCATTC-CCCTTGGTCCCAGGGGCCCCCTAGTCCCTTTCTTCAGAGCCCAAAGGGGAAACTGAAGCCCAGGACTGGC-AGCAAGAATCAGGG-ACCCCACTGGACTCTTACCAATTCCTCTATCGTGCTACTGAGTTGTTTGTTTGTTACATAGCTGGAGTCCAGGGCTACTGCTAGCTCTTGGTACCGGTTCTGAGGCGCATGCAGAGAGGAGGAGTTGGAGGAGGGATGGGGGGAAAGGTAGAGAGAGC-ATCATTAGG---GGTGGGGGTG-GTGGGCTGTCTCAGCTGGCAGCGGGCACCCAGGTCC---CTGTAGGAGGAGATAGGC-TGTTGGCGTAAAGGGTTGCTGGGCCATGAGTCCAGGCCACTCACCTCCAGTTCCTTCA---TGTTGGAAGATGTGAGGCCCTCCCCGTTGATGTAGGATGTAGACTAGGAGAGACAATACCTCACATGGAGATGCTCTGT-GACCCTCAATGTCTAATCCCTGCAGCCTCCTACTTCCCCC--TCAACTAGCAGAATCTCCTTTCCTGCTCA---------------CTCACACCCCCTTTGTGCCA---CTCCTTATGGCTCTTTTCCCGCCATGGCTCAACCTCGCCGCTC a score=4986 s hg17.chr15_random 426568 239 + 784346 ATTCAACCATGGAAG-TTCCTGGCACATACATCAGGTATTCACAATACCCTTTCTCAGGTGTTTGGTCACTGCTAGTGAGCCTGCCTGGATCAGTGTTTCCCAAATGGCAGTCATTTGCATCTTTGCATTTTTTTTGGGGGGGGGGTTGTGGGGGTATATACCATACCA-GATtttttaaaaattgacattaaaaatacatg-------------tataaaatgtgtaaag-------tgcactaatctaaagtgcactgg s mm7.chr7 71306233 248 + 141766352 ATTTAACAACAGAAAATGCCTGGTACAATCACCAGGCACTGATAATACTTTCTGTTAAATATTTTCATGATGGTAGTGACCTTGTCTGGATTAAAACTTCCCAAATGACAGTGACTTCCATTCTTGCAGTTTTT------GGCAGGTC-------CATATCTTGTATTACTATTTTTTTTAAACTGACTTTGAAATTATATGAAGTTAATCTTTTCATATAATTCTTTGAACATTTTCTTCATTCATATAATATACTTTGG a score=46348 s hg17.chr15_random 426807 2392 + 784346 atgtattttttattgatgtaca---------tacttttgt---------tatccatcacccaggtcaaaatacagaatcagcac-cacagagggttccctcctcctccttcccagccaataatcttctcctcctacctaaccaactgttcttacttcaagcactgtcaactagtattttacattcttgaactgcatataaaGTGTCTCAAGTTTCACTTAACACTTTTCTTGAAATACACTTGTTTTTTGCCACTTTTTATTTGACCTAAGAAGTAACATTAATGAAACAATGATTTGACGTGATAGGCAT-TTCCCTCCTAATGA-GCACTAAAACACTTAACTATTTGAAAAAAGAAGTTTCTCCGTGTACCAGCTAATATATTCTCCTCGGCCGCCGTTGGTACACGGACCACATTTTGTTTCTC-AAAGCAATCCGATGATTTCTGAGGTCCTTTGCAGCTTGAAGACGGAACGACTGTGGTGATCGAGTAGCCAAAAGTTCACGGAATGCACTGTCACAATTGTGATTCCGCCATAGCGCCGTGCATCCATCCAACACTTGTTTAATACCTATATTTAATACCTAATACCTTAGAGTGTCCTAGGCTGTGGACACACAAGACTAAACCCCACTTCCTGAGTTGAAGTGGGGGAAATAGAGGAGTAAATCATTTCACGATGTGTGGTTAAATGCTACAGCTCAGGTAACCACGAG-CACACAGAGAAAGGGCAGTTTCTAGAAACAGGGCGGAGAGGAGACCGTGAGTGGGCATTTCCCAGAGCAGTCTCTGCCAGCCACCCTGCTGTGATCACTTTGCCACAGAGCAGCCCCGGCGGTCAACCTCAGCCTCCCTTAGCAACCTGAGCGCCCCGCCCAGGTGCCTTACTATTGGTCTCGTGGAGCGGGATGGGCAGCTCTGCCGTGCAATCCCAGCTCGCAGCCCTTGCTCCGCGTGTACTCACGGGAGGACTCGCAGACGTTACTGCCTTCTTGCGTGCCCCGGCCACCCCCGGGCGGCTTGTAGCCGGTGCGCGGGGTGGCTGGGGCTACGTGCAGAGCTGTCGCGGAGCCGGAACAGCAGCGGTGAAGCCCCTCGGCTCGGCCGAGAccgccgtgcccattgctcgcctcggttgccgccgctttagccgcagccgctgctgccgccgccgGGGGAGAGGCAGCCTATTGTCTTTCTCCGCGGCGAAGGTGAGGAGCTGTCTCGGCTCGGCCCGCGGGGGAGCCCCGGGAGCCGCACGGTGAGAGCGCAACTTAGTTGGCGGAGTTGGGGGAAGTTTTGTGATTTGAGGAGGGGTCGGGATGCGGAGCGCGGCCCGTCCCCTGCGGCCGCTCGGTGGGGCGGGCCCCAGAGGAGGGTCGGGGGCTGCGCGGGGCTTCAGGGGCGGGCGGCACGGATGGGTAGCCGGGCGGCGCGGGGACCTCAGCTTTGCGGACCCCTCCTCCCTGCGCATCACCCTTCTCCCGCATTGTCTGCTTGGGGCTCGGCGCGCCTCCCACTCCGCAGCCCAACTTGGGGGCCGTCGCCGCTTTCCGGATggggggcgcgcccggcgg--cggATGGCCCCGAACCCTTG--CCCCGGGTCCCCGGGT---TGGCGCC-GCTGGGGCGGACTCACTCCTCCCCTGGGGCGGGCGGCCGCGGTGTGGAGTCCGCGCCGCGAACAAGTGCTGCGG--GCGCGAGGGAGCGGTTCCCCGGGGCCGACGCGGACGGTAAACCTGTCCGGCGGCGCCCGCCTGCTGGGGCCTCTCCGCTGTTTCTCGCGGGCGCGGCCCGGCTGAAACTGCGACCGTCGGAGGCGAGCGGCCCTCTGGGACCCGT---GCAGCCGGTCCACCTTGCAGCTATACTTTGAGACTAAACATTTT-------------TTTTTTTTTTTTTTGCAAAGGCAAACCGGTATGTGA---AGTTGAAAAAAGCAAAAACCCTCAAATTTTCCTTCTTTCTTCTTTTTTTTTTTTTTAAATCAAGAAAGGGGGTAGATAGGTTTGT-TTTGTTTTGGAAATAGTTTTTATAGCAGAGTGATACCGTCACATTTAATGATCCTACTGTGAATTCAAGAATTCACGATGAAAGTTGGATTGAGCGGTATTTTGGTG-TTCATTCTTTGCTGATACTCAT--TAATGAAGTTAGTTGGAGAATTTATTGC-TTCAGTACA-GTAAAAACCAGTGTGCCTTT-----------------------TTTTTTGTTACTACTCCCCCCTCCCCGCATTGTTTTATTTTTCGAAGAAGCACTTTATTCAGTT----------TTTCTAAGCCACGGGATTGCCCAGATGAGGACCAACGGTGCAGTTCTTGAAAGGTCATT-ATTGGCAAGTTTGTGAGGGAGCT----------AAGATGAGT-TGAGATAAACCA--GTGTTACTGTTCTTGTATTCTGTCGTGGACTCTTGGGGATTTGCAGGCTGCATT s mm7.chr7 71306656 2077 + 141766352 GGGTATTTatcttaggggtacagccacataatattttcatattaatatgttttgatcacctaaataaaaatgcaaggccagtactcgcagaga-ttccattctgttccttcccagtcaatacccttctcctcctaggaaactacct-ttcttacttcgaccacaataaa--------------tATTAAACTGCACAGAAAACCTCACATTTCTTGCGTAATATTCATAATCCCCGGCTCCCCCCCCCCCCAACTTTCTATT-GACCGAAAAAATAACAT----GTCAAAATAGTTTGGCATTATAGGCATGTTTTCCCTTAATAACACATTACAATATGTAACTATC---AAAAAGAAGTTTCTTTTTGTACCAATTAATGTAGTATCTTGGGTCACCATTGGAACATGT-CCATACTTGGTTTCTCCGAAGCAACTAGATGGTTTCTGAAGTCCATAGCAACTCAAAGGCAATGATTTTGTGGTGATCGAATAGCTCAAAGT----------CACTGTGACAATCTT--------------------CACCCATCCAACA---------TACTTG------------AGTACTTTGTGCCGCTCCA--CCTTGGACTCTTAAGA--AGACTCTATT----GAGTCTTAGCGT--------------------------CAACGTGTGGT-AAGTGCTCCGACTTAGGTAAGCACCAGGCGCACAGAGGAAGGGTGGCTTCCGGTGATGGGGCGGATAGGAGAAGGTGGGTGGGCATTTCCCC-AGCAGCTGCTGCCAGCCACCCGACTTTGATCACTTTGCCGCCTGGCAGCAGTGGCGGTCAACCTCATCGTTCCTTAGCAACCAGAGCCAACTGCCAAGAAGCCTTCCTATTGGGCTCACAGAACATGATGGGTAGTCTAATTGTCCAATAGAAACTTTTAGGCTTGGCTC-----------------------------GTT---------------GCACCGCCCACCCC-GGGCCGCAGGCGGCGCATGCGCGGG-TGGGCAGGTCTGTGTGCAGGGCGGTCGCAGAGCCGGAGCTGCTGCTGCTAAGCTCTTGGGCTCGGTTGAGACCGCCGTGC---TTGCTC------------------CTTGCTCCAGCCGTCACCGCCGCCGCCGAGGGAGCGGCCGCCTATTGTCCTTCTCCGCGGCCAAGGCGCGGAGCTGCTCCGGCTCGGCCCGCGGGGGAGCCCGGGGAGCCGCACGGTGAGAGCGCAACTTAGTTGAGGGAGTTGAGGGAAGTTTGGGCGTCTGAGGAGGGGGCG---CGCGCGCAGCCGCCCCTCCCCCTCGGCTGCTC--TCGGCCGCGC------------GCGCGAGCTGC---GGGACGCGGGGACGCGCGG---------------GCGCGACGCGGG----------TGGCGGACCCTTCTT---------------------AGCATCGGCAGCCAGGGG-------------------------------------------------------TGGATAGCGCGGCCGCCGATCCCGGCCTCCTCGGACCCACGTTCCTCTGCTGCCCGCTTCTGTGGCGCCGGCTGCGGC---------TCTCCTCTGAG--GGACGGCTGCTCGGTGGGGCGCGCCGCTCGAACAGAGAGTGCGGCTCCGGGAACGAGCAGCTCCCCGGGGCAGTCAAGCCGGGTAAACACTGCGCGCCCCGGCCACCTTTGGGGGC----------TTTCTCCCGAGATGGGGAGGG-----------------GGGCGCGGTGGGCGCCCCGGGAACGGTGGCGCATTCGACTC-CTCTGCCCCTCGAGCTCTAGTGCAAGCACTTTGAGAACTAGCGAATCACTGCTTTTCGTAAATAGGCTCGCTGACACTTAACTGGGGTGCGAGACGC----ACCCTCAG--TTTATTTCTCGCT---------------------AAGAAAG----------TGTCTGTCTTTCGGCTGAAAATATTGGCTAACTCTAAGTG-----------TCTA--GACTCTACTGTGAACTCAGGAGTTCACAATGAAAA-TGGATTGAGCAATCTCTGAGTGTTTCAGTCTTTGCTTTTCCCCTTCATAATGAAGTTATTTTGAGAGTTCATTGCGTTGAGCAGATTTACAAAGTGATGTGCCTTTTtgtctgtctgtctgtctgtctgtTTTTTGTTACTACCCTCA---------------TGATTTCCCGAAGTCAC---TTACTCATTTAAACCCCCACCCCCCAAACTTTTGGATTGCCCGGGTCAGGAGGAGCGCTCCAGTTCTTGAACGTGCATTCATT-----GTCTGTAAAGAAGTTCCTATCAGTCGAGATGACTCTGAGATAAACCAGTGTGTCACT----TTGTACACCATCAT---CTCTTGGGAATCATTCCGCTGCATT a score=24305 s hg17.chr15_random 429402 1205 + 784346 AAAAGGACTCAAAGCCATATACTAGTTCCCAATAGGCCTGCACAAGTTATTAGAACAAGCTGCTTTGCATTCTTGTGTGATCAGAACCAGTAACTAGA-------------TGGCAATCAGGTCTG-TTACTGAAGATGGAAAAACTATACTTAAGTTTGTATAAC----AATCTTTCATAACATGGCTTCACAGAAAAGAAGTATAAAAAGGATTCCTTGGTTGAAAAAGAGTGCTCTTTTCCCTTCATTATTTAAGATTAGGGCAAATTTATAAAACAGGA---AAAAAATAGCACAAATC------CCTTGGCAAACAGAGTAAAACATCTACTC-TGTTTTGCTTTTTTTCACTTCTTACACTCTCTTTCATAGGAAGTCAATTTACAGACTTCC-ATCAAGCCCTTAGAGACCTTTT---------TGTACTATCCATGACAAGCTCTTGATGTTATCTCTGCACTTTTGACAAATTCTTAGCAGTTAACTTACAAGGCAGTTAAGATTTTTGTTCAAGCACAATATAGCTAGAATAG-GCTCATACATTCAATAAAACAAATATTTACCAAGCATTTATTGAGTGGAAGATAAAAAGCACAAA-GCATAATTATGAAATATTTTCCCCTGCCACCAT----------AAAAAAATTAAACAGGCTTACAGAATACAGTGTAAGAAAACATGACCAAAGCAAAAATAGTAAGGACTAAAGAAGGGAGGAAGGGGAAATATCAACATGGACTGAATATGACCCAAAAGAGCCTTGATGGATGGTCAGACAT-GTAAAGGCAAATTGGTTAGGGTTAAGGGGTGGAGGTCAGGGCACGTTCTATAGGGAAACGGCAGCTGATACAGAAGCCTGAAAGGAAAAGCGGGCAGGGCACCTGGACAGGACTCTTCAGGAACGAGCACGCACGTGCGTGAAAAACAACTTAGTGAGGTACCGTCCACCCAAACATTAGAGAAACCGCGTAAAAATGCTTCTTGGTAAGCATGAAGAAGGCAGGGCTCGGCCTGTAGAAGAACTCAATAAACATTTGAACTGTCTAAAGAGTAAAAGTTAATGAATAGGCCAAACTCACTCCTTTCTTTGTTTTAAGAGCTACAACTTTAG--AGAATAACAAATCACAAACCCAGTAGA-CAGGTCCTGGCATTTGAAATCCAACCCCATTTTTCCCTTAATCTTTCCCCTCTGAGCAAATGGTATCGACATGAACAAGCCATGTTGATTTGATCAAGACA s mm7.chr9 68644147 1071 - 123828236 AAAAAAAAAAAAAGCCACATATTAGCTCCCAAAATGGCCATACTGGTTATTAAAATAAGCTGCTTTGCTTTGGACTGTGATTATAAC----AACTAGATGTTAGTGAAGACTGGCAACCAGGCCTGTTTACTGAAATGGAAAAAGCAATGCGTACGTTTATGTAACAGATAATCTTT-----CATGAGTCCACAGAAAACAAG-----------------------AAATAAAGACTCTGTGAGCTTCA-TATTCGAGAGTACAACAAATTTATAAAACAGGATGGAAAAAATAAACCAAACCAGCCCACTTTCCCTGGCCCAGGAAAGCAGACACTCATGTTGTGGTTTT----AATTCTGACACT-------------GGTCTTCCTACAGATGTCCTATCAAATCTACAATGACCTTTTAAGTATCTCTTTACTGCCCATGATA-----------------CTG----TCTGAGAAATTCTTACCAGCTATCTTTCAAGGCAG-GAAAACTTCCCTTCA-----AATATAACTACAACAGTGGCCATATAGTCAATAGAACAAGTATGAACTGAA------------AGAAAATATAAGGCACaaatttataattatataatatt-----CTGCCACTATTACAACTTGGAGAAAAGATAATCAGAATTATGAGTAAACATGGAAGAAAA----AAAAAAGCAGAAATCACAAGAACTA---AAAGGAAAAAGGGGAAATGTTATTATGAACTGCGCGTGACACAGAA-AGTCTTAAAAGGCAATCAACCATAGAAAAGGCAGGCTGGGACAGGGCAGAGGCGAGAGGCAGGAGCTCGTCCCACTGAGGAAGAACAGCTGATATAGAAGGTTAGGAAG-AAAGTGAGCAGTGTCCTCAG--AGGACTATTCAGAAGCTGGTCCACAAGTAC-------------------GATGCCATTCAC--------------------------ATGTTGCTTGG-GAGCTTGGAAA--------CCTGGTGTACAG-AGAGCTTAATAAATACT---GCTATGTAAAGAGGAAAAGTTCAAGAACGACTTAAGCCCACTACACTA--------ATGACCTACAACTTTGTGCAAAATAGCAGGTCACAAACCTAGTAGACCAGGCACTTGTATTTGAATTCCAAC---------------ATTTTTCCCTTCTGAGCAAATTACACCTATAAAAGCAGGCCCTATACATT--ATCAAAACA a score=3637 s hg17.chr15_random 431696 179 + 784346 ATGAAACA--CTTTCTTCCACCCACGGCTTTCTCTTCTCTCCCCATTTACAGCAATAAGACAGCCTAACCTGGGAAAGAGAGAGAGAGGGAAGCTACTTCCAAATGGATGCCTGTCCCCATCAGTAATAACCAAGTCTATTCAAGTGCTAGATGTTAACTTTAAAAGAAGGAAACATCAAA s mm7.chr7 70454855 161 - 141766352 ATGAAATAAACTTCTTCCTACAAACAGCTTCCTTCTCTCTTCC---TCAAAACAGTAAGCTAGGCAGGCC------ACACAACACAGGGACAATCACTTCCATGTGGATATCCATCCTTATCAGTATTAACTGTA-----------GCTCAGGACTAACTTTAAGACAAGCAAGCATCAGG a score=1589 s hg17.chr15_random 432193 45 + 784346 TAGCTTTGTCAGGAATGTTTTTACCCTCAGTCTGTAAGTGTGACC s mm7.chr7 70455016 44 - 141766352 TGGCTTGGTCTGGGATGTTTATCCCTACAATCT-CAGGTTTGATC a score=9091 s hg17.chr15_random 432600 263 + 784346 AGGTAAATATTTCTAGAATGTATCTACTCCATCAGCTAGTGTAAGTATTCTAAACTGTGCTAGTATAGCTGCTTTAAATCACTGCTTTCTTCTGCAAATGGTGGCACCTTTAAAGTGTTATCTTGAAGGGGAAGTGAGTGATTTGCTCATGTCTCTACTGAACTA---ACACTGTTAACACCCAGTCCAGTTCTACCTTAAACAAGTCGGAGAAATACAGACATAA-TCCATACTTGTTATTTGTCAAGACTAAGGTAAAATAAGGA s mm7.chr7 70455060 246 - 141766352 AGGTAAACAGTTCTAAAACTTATCTACTCTGTCTGGCACTTTAAACATTCTGAACTAAGTTGGTACAACTGACTTTAGCCACTGCTCCTCTCTGTAAATAGTGGCACTTGAAAAA--------------GCAACTGAGTGGTGTACTCGAGTCTCT---GAACTATGTATTCTGCTGACACTCCATCCCGTTCTACCTTGAGCAAACCTGAGAAAT---GTCATAAAGCCACAAATATTATTT-TCAAGACCGAAGTAAAACAAAGG a score=4177 s hg17.chr15_random 432898 223 + 784346 GTACTGAAAACAATCCATCTCTCACCATTTCCTAAATAGCATAGTCACAAAGAGCTCTACCCTACCAAGTACTCTGCAAGTCCCACTCTCAAAGGAAGACTCACAGGTGACTGAGAAGATAAATTTGCTATTGTTTCCATTATCCTTCAGTTCATCTGACACCTTTGAAGAAATGCATTTGGATAAGACTCACAAGTCTCAGGGCCCCTTCTTTATGAAAGAA s mm7.chr7 70455774 179 - 141766352 GTACTGAAAACAATCTCTCTCTTGTCATTTCTCACACTATACAGCTGTACAGATTTCATTCCTACCAAGGCACCTGGGA-TCCCACTC--AAAAGAAAGCTAACAGGTGAC----------AAAACGGTATAGCCTCTCTCATCCTTCTGTTCAGAGGACGTCTTTTAC---ATTTATTTG----------------------------TCTTTAGGGTGGAA a score=6510 s hg17.chr15_random 433140 305 + 784346 CAGAAGCATCAGACTTTTCAGAATGCTT-----AAGTCATGTAAAAACGTATCAAAATTATTATCATtacagctaccaggaaatagctacctactccatgttagatactgcagttaagtatctcacacagtttcactgattcctaacaacactgcaaagcatgttactaacccttaaggagtaggaagctgaagctctgagaggctatgcaactactcaatg-----------------gaaatgtggggatctgaactc-----tacctagctccaaagggcgtacttttttcTAAAATTTCTAATTTTTTTCCAATTTCACAATGGAGGC s mm7.chr7 70456071 301 - 141766352 CGGAACCCTCA---CTTTAAAAACACTTTTTAAAAGCCATGTAAAACCGTACCACAATGAT---CTTTTTAGCCACCAGGAAGCAGA----------ATATTGGACAGTGTA-CTAAGTCTCCTAGACCATTTCATGCATTCCTAAGAACAT-------AAtattactaccccttacaaggaaagaagc--aagctcc-agagtcaagtgcagtgctcaaggcttcaaaaccgtggaaggaaagctgaggatctgaactcagatttacataactccaaacag-ggaatttcttctaaactat---gctccctcccAATTTCACAATGAAGGA a score=1051 s hg17.chr15_random 433616 110 + 784346 GGACAGATTTCTAAATCGGAA--------------TCTCTTGTTAAAATCCTTAGAGCACTAGTTAAGCCCCACTTCTTTTCAAAAAATAACCGACAGA-----------------------------------------------TTAAAAAAA---AGGTTAGAAATCCTTT s mm7.chr7 70456434 174 - 141766352 GGATGCATTTCAAAACTGAAAAtttctttttttttttttttttttAAGTCCAGAGTGTACTCTTTAAATCCCAGTTATTTTCTAGAACAAATCAACAAAAAGAGTTTTTAAAGCTGGGAAAAGTGATACACACGCGTTATCTATCCCTAAGGAAACCAAGGCAAGGAAACCTTG a score=16206 s hg17.chr15_random 433726 755 + 784346 TAAAGTAAATTTCATCAGAGATCTGCAAGTGAATTGTCATTTTGGACAAGTCCCCAGAGTTGGTGGCCCTCTCCTGTGTACACCAGCTACCACTAGGCAGTAAAAGTAATTT-ACCCAATTCAAACACATACCGGGCCTGCACTATGTT----------------------------------AAAACCACTGGCAAAGAGGGTACAAAGTTAAATAAGGTCTATCACAGCCCTCAAGGAGTTAAAGGACTAGAGGAGGAGTCCATTTATAGTATAGTATGTGTGCAGTTACCATTTAGTCAAGGCAAACGAACTGTGAGAAATCCTACAACAATAGTACCTACAGTATAACATGCCATCACCGCCCACAGAAGGAAAGCAACTGGTGCCCTCGTCACGTTATGTTGTTAGTACTTGCTTACATGATGTCCCTCCCTGACAATCCCTTCCAACCTCTGTCAGCCTCCTTCCCCACAATCACACACACACACAAAACCACACTGCCAGGAAGGGAAGCCATTGAGTG--AGTATTGTGAATCCTACAAGTGGCTCTGTAGTTTAAAAGGGCAATGCCTGTGCCTGAAGAAAATTTGTCTTTAGCTTCATCAGGTGAAGAAAATTGGTTTT---ATAACACAAGGCCCAC--CAAACCAGAAAAGCCCAGGAAC-GCTTCTCCACAGGACTCACTTAGCACGAGAAATCACTCAGAGCAAACTGACGCACACAGTATTTGTCAAATTTTTCTTTTTCATTTAGCAGAAGGTAAGGTAAAGGACTACAACTGAAGTTAATA s mm7.chr7 70456816 688 - 141766352 TAAAGTAAATTTCACCACAGATGTGCAAGCTAATTGTCATTTTGTACAAGGCCCCAGAATTAATGGGTTTCTCCTGTGTACAC----TATCACTAGCCAGTGAAAATCACCTCACCTAAATCAAACAAAAGCTAAACACCAACTGTGTGGACTTTTCTAGaaaaaaaaaaaaaaaaaaaaaaaaaaaCAACACACACACAGAG--CATAGCAAAATACCACCCATCACAATCCTTAAGGTGTAAAAAGACTAGAAAAGA---CCATTTATACTACA-------CATAGTTCCCATTTAGTGAAG-CAAAT------------ACCCTAGAACAAAAGTAT-----GTGTAGCATGTTACCACAGTCCAGAGAAGG-----------TGTCCTGGCCACCCGATTTTGC-AGTATTTGTTTATATTATGTAACTAACCAATAA---CTCCCAACTTCTGTCCACCTCCTTTGC-----TCAC-CACACCCACC-----------CCAGAAAGGAAA---ATTAAGCACAAAGACTGTGAGTCCTG--------------------------AATCCCTGTGCCTTCAGAATATTTTTCCTTGGTTTCATCAGGTAAACGAAGCTGGGTTTCATACAAAGAAAAGCCAAAAACAAAACAGAAAACCCCACACACCACTTGTCCATGTTATTCACATAGAAAAAAAAA---------GCAAAATGCCATGAGCAGTAGCCTTCAAAGAAAAATTTA-AGTTTAACAAATGTCAA-----AGAAATACAACTAAAATTAACA a score=8694 s hg17.chr15_random 434492 506 + 784346 AGCCATTTTGATCATTTGTCACTATAAATGATAGACATTTAAGCTAGTTCCATCTGGGGAAGTGAAACAGAATCATGTTCATATAATAAGCCAGACGAACCAAATTCAGTGGAATACGTGCACCCAAAACTGGACCAGACTTGTACTTAATGCAGCCTGCAAATCCCCAAGAGTCCACGACAGAATACAAGAACAGTAACAC--TGGTTTATCTCA-ACTCATCTT----------AGCTCCCTCACAAACTTGCCAAT-AATGACCTTTCAAGAACTGCACCGTTGGTCCTCATCTGGGCAATCCCGTGGCTTAGAAA----------AACTGAATAAAGTGCTTCTTCGAAAAATAAAACAATGCGGGGAGGGGGGAGTAGTAACAAAAAA-----------------------AAAGGCACACTGGTTTTTAC-TGTACTGAA-GCAATAAATTCTCCAACGAACTTCATTA--ATGAGTATCAGCAAAGAATGAA-CACCAAAATACCGCTCAATCCAACTTTCATCGTGAATTCTTGAATTCACAGTAGGATC s mm7.chr7 70457534 464 - 141766352 AGGCATTGTG------TTTCAGTATGAATGATAGG-----------GTTCTCTCTTGGGAGCTAAAACTGAATTACCATTACAGCGCAAGTCTAGTCAACGAAATGCAGCGGAATG----------------------------------------------ATTCCCAAGAG---ATGATGGTGTACAA----AGTGACACACTGGTTTATCTCAGAGTCATCTCGACTGATAGGAACTTCTTTACAGAC-----AATGAATGCACGTTCAAGAACTGGAGCGCTCCTCCTGACCCGGGCAATCCAAAAGTTTGGGGGGTGGGGGTTTAAATGAGTAA---GTGACTTCGGGAAATCA---------------TGAGGGTAGTAACAAAAAacagacagacagacagacagacaAAAAGGCACATCACTTTGTAAATCTGCTCAACGCAATGAACTCTCAAAATAACTTCATTATGAAGGGGAAAAGCAAAGACTGAAACACTCAGAGATTGCTCAATCCA-TTTTCATTGTGAACTCCTGAGTTCACAGTAGAGTC a score=22499 s hg17.chr15_random 435166 1078 + 784346 AAAATGTTTAGTCTCAAAGTATAGCTGCAAGGTGGACCGGCTGC---ACGGGTCCCAGAGGGCCGCTCGCCTCCGACGGTCGCAGTTTCAGCCGGGCCGCGCCCGCGAGAAACAGCGGAGAGGCCCCAGCAGGCGGGCGCCGCCGGACAGGTTTACCGTCCGCGTCGGCCCCGGGGAACCGCTCCCTCGCGC--CCGCAGCACTTGTTCGCGGCGCGGACTCCACACCGCGGCCGCCCGCCCCAGGGGAGGAGTGAGTCCGCCCCAGC-GGCGCCA---ACCCGGGGACCCGGGG--CAAGGGTTCGGGGCCATccg--ccgccgggcgcgccccccATCCGGAAAGCGGCGACGGCCCCCAAGTTGGGCTGCGGAGTGGGAGGCGCGCCGAGCCCCAAGCAGACAATGCGGGAGAAGGGTGATGCGCAGGGAGGAGGGGTCCGCAAAGCTGAGGTCCCCGCGCCGCCCGGCTACCCATCCGTGCCGCCCGCCCCTGAAGCCCCGCGCAGCCCCCGACCCTCCTCTGGGGCCCGCCCCACCGAGCGGCCGCAGGGGACGGGCCGCGCTCCGCATCCCGACCCCTCCTCAAATCACAAAACTTCCCCCAACTCCGCCAACTAAGTTGCGCTCTCACCGTGCGGCTCCCGGGGCTCCCCCGCGGGCCGAGCCGAGACAGCTCCTCACCTTCGCCGCGGAGAAAGACAATAGGCTGCCTCTCCCCcggcggcggcagcagcggctgcggctaaagcggcggcaaccgaggcgagcaatgggcacggcggTCTCGGCCGAGCCGAGGGGCTTCACCGCTGCTGTTCCGGCTCCGCGACAGCTCTGCACGTAGCCCCAGCCACCCCGCGCACCGGCTACAAGCCGCCCGGGGGTGGCCGGGGCACGCAAGAAGGCAGTAACGTCTGCGAGTCCTCCCGTGAGTACACGCGGAGCAAGGGCTGCGAGCTGGGATTGCACGGCAGAGCTGCCCATCCCGCTCCACGAGACCAATAGTAAGGCACCTGGGCGGGGCGCTCAGGTTGCTAAGGGAGGCTGAGGTTGACCGCCGGGGCTGCTCTGTGGCAAAG-GATCACAG s mm7.chr7 70458135 865 - 141766352 AAAGTGCTTGCACTAGAGCTCGAGGGGCAGAG-GAGTCGAATGCGCCACCGTTCCCGGGGCGCCCACCGCGCCC-----------------CCCTCCCCATCTCGGGAGAAA----------GCCCCCAAAGGTGGCCGGGGCGCGCAGTGTTTACCCGGCTTGACTGCCCCGGGGAGCTGCTCGTTCCCGGAGCCGCACTCTCTGTTCGAGCGGCGCGCCCCACCGAGCAGCCGTCC--CTCAGAGGAGA---------GCCGCAGCCGGCGCCACAGAAGCGGGCAGCAGAGGAACGTGGGTCCGAGGAGGCCGGGATCGGCGGCCGCGCTATCCA-------------------------------------------------------CCCCTGGCTGCCGATGCT---------------------AAGAAGGGTCCGCCA----------CCCGCGTCGCGC---------------CCGCGCGTCCCCGCGTCCC---GCAGCTCGCGC------------GCGCGGCCGA--GAGCAGCCGAGGGGGAGGGGCGGCTGCGCGCG---CGCCCCCTCCTCAGACGCCCAAACTTCCCTCAACTCCCTCAACTAAGTTGCGCTCTCACCGTGCGGCTCCCCGGGCTCCCCCGCGGGCCGAGCCGGAGCAGCTCCGCGCCTTGGCCGCGGAGAAGGACAATAGGCGGCCGCTCCCTCGGCGGCGGCGGTGACGGCTGGAGCAAG------------------GAGCAA---GCACGGCGGTCTCAACCGAGCCCAAGAGCTTAGCAGCAGCAGCTCCGGCTCTGCGACCGCCCTGCACACAGACCTGCCCA-CCCGCGCATGCGCCGCCTGCGGCCC-GGGGTGGGCGGTGC---------------AAC-----------------------------GAGCCAAGCCTAAAAGTTTCTATTGGACAATTAGACTACCCATCATGTTCTGTGAGCCCAATAGGAAGGCTTCTTGGCAGTTGGCTCTGGTTGCTAAGGAACGATGAGGTTGACCGCCACTGCTGCCAGGCGGCAAAGTGATCAAAG a score=25335 s hg17.chr15_random 438307 1000 + 784346 GGGCTGGCTCAAGGTTACACAGTGAGTGTGGGGGCAGAGGCGGG----------------------CCCACTGTACCTCCCTTGTTGGGTTGTCTGAGGA----CCCCTCTGGCCACCCCCCACAGGAGATG--GAGGAGGACATCTGGACAGTGAGCAGGAGGCGCTTCGGCCCATGCCGAACATCCCAGGGGACCTGGAGAGCCGGGAGGCCATGGTGAGCCTGACTTT-CCCTGCCCCTACTTTGCCACCTTCCTCTGTGGTCCCTCCGAAACCCCCTTATGTTCTTGGTTTCCCCGCCTTCTGACTTCTGTGGACTTTC--TCTGCTTCTGGGAGCCAGTGGTCAGACACCATTTCACCTGTGACCAACAGGTGCACTCTGTGAGGCCCGAAATGAAGGGGCTATGCTCCATCTGCCTGCCCCAGTTGTTATGTGTATACCCCTACAAGA-ATACTCACCTCTTGTCTTCAGGTGGCATTTTTCAACTCCGCTGGAGCCAATGCCCAGGAGGAACAA------------------------------AGGGTGTGCTGCCAGCCCCTGGCTCACCCAGTGGCCTCGTCCCAGAAAAAGCCAGAGGTAGCGGCCCCAGCCCCAGAGAGTGGGGGTGAGTCTGTGTTTGGGGAGACCCACCGGGCCCTGCAGGGGGCCATGGAGAAGCTGCAGGTGAGTAGGTCCTGGCATCGGCCAACAAGGGGGGCGGGGGGGCAGGACAAGGCAGGTGACTCCTGACATGTGACCCCATTATTTTGGCTCCACAGCGACTTTATGGA--------AGGAGAAGGTGGACCTGAAGGAGCGGGTAGAGAAACTAGAGCTTCAATTCATCCACCTCTCAGGACAGACAGACACCATAGG-GAGTGAGAGGCTAGGGCACCGCTGGGGGGA----GCTGCCAGGCCGTCTGAGGG-GCCCCAGCATCTGAGCCATGTCCTCCTGC-------------AGGAAAGTACATC------------AGCCAGGGGGCAGTGTCAGAGACGCAGCACTGGGAGAGG----AGGACATCGTCAGGCTGGCCCAGGACCAGGAGGAGATGAAGGTAGGG s mm7.chr2 32312401 999 + 182548267 GGGCTGACCCCAGGGTATTCAGTAGG----GATACAGAGGTGGGGCTCTGAGCTCTCTTCCCCTAGCCCACTCAGTCTACCTGATGGGATTATTAGAGGAGACAACCTACTGTCTGCCCCC---AGGAGATGTGGACCAGGA-----GGAAGAAGATGAGGAGGTTCCTCAGTCGAGTCTGGCCATCCCAGAAGACCTAGACAGTAGAGAGGCCATGGTGAGCTGGGCTCTGTCTTGCCCCTTCTCTTTT--CTACCTCTGTGGTCC---------------------TCGGTTTCCT-ACCCTCTGACTTCTTTTGATTGCCACTTTGTGCCTGGAAGCCAGTGGTCAGTCTCCCTCTC------------------------------------------------TGC--------CCTGCCCCCTTTGTCCTGAGCATTTCCCTGAAAGGCACACCTCCCTCTTGTGTGCAGGTGGCATTCTTTAATGCCGCTATAGCCAGAGCAGAGGAAGAACAGGCCCGACTACGTGTGCAGCTGAAAGAGCAGAAGGCACGTTGCCGGAGTTTGTCTCACTTGGCAGCCCCAGTCCAAAGCAAGCTTGAAAAGGAGGCAGTGGTCCCCAGGAATGTGGATGACTCTGCATCTGAGGAGAGCAATCAGGCCCTACATGTAGCCATGGAGAAGCTGCAGGTGAGTTTGTCT--GTGGGGGCT------GGGAGTGTGGGGGCCAGCCAGGGCTCCTGAGTCCC----TGAGACCTC--TGTCTTGGCTCCAGAGCCGCTTCCTGGAGGTCATGCAGGAGAAAGTGGAGCTCAAGGAGAGGGTAGAGGAGCTTGAACATTGCTGCATTCAGCTTTCTGGAGAGACAGACACCATTGGTGAGGTGGAGCCCAGCCCAAGGCAGTGGGGGCTGTGCAGGGGGGTAGACTGGGGGAGCCACAGTGTCTGAGCCTTGTCCACCTGCCTGCCGTCTCCACAGGAGAGTACATTGCCCTTTACCAAAATCAGAGGGCGGTGCTGAAGGCTCGGCATTTGGAGAAGGAAGAATACATCAGCCGGCTGGCTCAGGACAAGGAGGAGATGAAGGTAGGC a score=18713 s hg17.chr15_random 439376 484 + 784346 AACACCCCTTCCTCCAGGTGAACCTGCAGGAGCTGCGGG-GCAGGTGTTGCAGCTTGTGGGAGACCACAAGGAGGGGCATGGCAAATTC-TGACCATTGCCCAGAACCCTGCTGATGAGCCCACTCTAGGAGCCCCAATAGCCCAGGAGCTTGGGTGTGCTGACGAGCAGGGTGGTGAGTAGAGCCCTCAGGCGGGGTGGGCAGGCAGGAGCAGGGGAGGC-TCACACTGTGCTCAGATTCCC-ACCCCCCCTCCCTCTCTCTGAAGATCTTTGTGAGGTGAGCCTCACTGATAGCGTGGAGGCTGCACCAGGAGAGGACAGGGAGGGTTCTCCCCACGACAACCCCACTGCACAGCAGATCCAGCAGCTGCTTCCTGTAATGCAGGACTCCCCAGGAGCACCCAGGCATGGGCAGCAACCCCTGCATGCCATTCTTTT--TGGGCTCCCAAGAACAGGGAGATAAACACCACCATCATCTGAGAGCCGG s mm7.chr2 32313453 485 + 182548267 AGCTCCTTTTTCTCCAGGTGAAGCTGCTGGAGCTCCAGGAGCTGGTGTTGAGGCTTGTGAACGAGCGCAATGAATGGCAGGGCAAGTTCCTGGCCGTCTCTCAGAACCCTGGTGACGTGCTCACCCCAGTGCCCACAGGCTCCCAGGAATTTGGTGCTGCTGACCAGCAGGATGGTGAGTAGAGCTGTT--GTCTCTTGGGAAGGCACAA--AGGGGAGGAGTCCCATGGCGTGCAGAGCCATGACCCCCTCCCCCTTTCTCTAAAGACCTCAGGGAGGTGAGCCTGGCTGACGATATAGAGCCTGCACAAGGAGAGGCAGGGGTACCTGCTCCCCATGAGAACCCTACTGCACAGCAGATCATGCAGCTGCTGCGTGAGATCCAGAAC-CCCCGGGAGCGGCCAGGCCTGGGTAGCAACCCTTGCATCCCCTTTTTCTACCGTGCCGATGAGAACGACGAGGTGAAGATCATGGTTGTATAAAAGACTG a score=57809 s hg17.chr15_random 439860 1828 + 784346 GAAGGGGAAGGCGTAGGTGTGGGCGTGG-CAAGGTTCCTGGAAAAGAGGGGCTGGAAGGGAAAGGGGAGGAAGATGGAGGGAGAAGCTAGAGCTTCATAGGTAGT--GCCTGGGGGCTGTGGCGGTCCTCCCCACCCCACACACACTGGCCTCTCTCATGGCACCCAGGCAGTCCACCCACAGTTCAGACCAATGCTCAACTCCCCCGGCTTCCCTCTTCTGTGGTCACCCCATCTTCCAACCCACTGGCCCAGGGCCACCTCTTGCTT-GGGGAGCCCCACCCAACAGCCACCAAGCCTGACAGAAGGAACACTGCTTGAACCAAAATGGTGAAGCTGTAAGGGATGGCTGGCTGGAGTGAGCGCCAGAGGCCCCTCTCTGGGCAGTCAGAAAGCCCAGGGTCCACTGAAGGGACCCTGGGGAAGGCAGGGAGGGCAGGTAGCTAGATGCCACTGCCCATAGACTTATAAGTCTAAGAGGGGAACCTCAACTGGTTGGCGGGGGGCTGCAGGTTGCATAGGTGAGGCTGGGCCCTTCCTGCTGGG-AAAAGCAGAAGAGGGAGACTCCGCGGCAGGAAAGGCAGGTGGG----------------------CTCGCTAGGCGGAGCTCAGCTGGGC---------CAGCAAGCACTGTGGTCTCCTTGGCTGAATAGCACAGGTGACCCCTAGGAGCAACAGGCCAAGGTCCGTGAGCCTGCTGGCTGGCAGTAGTGCTTCAGTAGTGCTGGCCAGGGACCCAGCCTTCAGTCACATGCTAGCAGCTGTGATGGTACCTGGGAGGGAGGGAAGGGGGCTGTGTGTCCTTGCATGGCCTATGAAGTGTGTTGTGGGATGACCGCGTGTATAGGACTCTCAGGCTTTTATCCTAGATCACCACTGGATTGCTGACAGATAGAGGACGTGGGACCGTGACTATCACCCCTAATCTGCAGTGGATTTGGCTCTCGGCACTCCCAGGCTGGGAGCTGGATACC--TGCCCTGGCAGCATGACTCAGACTGCATGACAGGTACGGCGTGCCCAGGATGATGTGCCCAGGCCTCTGGCCGCCTGAGTCCAGCCCCCCACACAACCCCCTCCAAGCTCCCAGCCCCTACACCATAAACCATGAGCTCTGTGCCCTCTCTGATGGTTCCACATCTGCCACCTTCGGCATGGAGCCTGTTGTAAGAGCCCCCAGGCTCAGCCATGGAGACCTTGAGCAGTGGCACTGAGTCCTGTGGCTGGCAGGGA-GGGAAGTGAGACAGCCAGCAGCACAAGGACAGAAAGAGGAAAGAGCAAGGCTGCAGCTCTAGAAGGGAGGGGCAGGCAGCCTGGCTCTGAGGCTCCAGGTATGCCCCCTGTGTGGAGCTGGGGCAGCGGGGCGGG---------CAGACCATTCATGCAGCAGGCAGTGAGGCATGTACCTACCATGGCTGATGCTCCTCAGGGGCCACTGATAGTGATTCTGAAAGACAGCATCAAATC-ACATGGCAGGTCCC--ATGCATGGGTGGGGCAGGCCTGGGGGTGGCGG----ACACACGCACACGCCAGATTGTGCACACACATGCTGTGAGGCCCCACGGCCC-GCATGCACACTCTA--ACACATGCCCACAAACAACACGCATACGTCGCCCTCTCCGCCACCTCCCGGTGCCCAACACCCTCACCAGCCGGCA---CGTGCCACATGGATCTGGGGCGTGCAGCCACTCGGCACACTGAAGCACATGCGTGGGCAGAGTCACAACACAGATGCTCACCCGCACACAG-AGGCATTTGCACCAGCTCCCTGCACACTCGTGCCTGGCGTGCTCAGAGGACCACCCATCCTGCTCAGGGA--GACAGGGCTTGCTCACTAATGTCCGGCT s mm7.chr2 32316462 1739 + 182548267 GCAGGGGCTGAGGCAGGTGTGGATGTGGGCAGGGTTCCCGGAAGAGATGCACAGTTGATGAATGAAAGGGAAGATGGGGTGCTGGGCCGTAACT-AGCAGGTAGTCTGAGTAGAGGCTG--GTGGCCCTCTCT-TGCCACACACAC-GGCCTCTCACACACCACCCAGGCAATGCACC-ACAG------------------------GGCCTCCCTCATTTTTGCTCACT--GTCTCTCATCTCACTGGCTCAGGGCCACCCCAAGCCTCAGGGAGTCCCATGTAACAGCCATGAGGCC----AGAAG------TGCTTGAACCAGGAGATTGAAGCTAAAGGGGATGGCTGG----AGGGAGCGCTGGAGGCCCCTC---AGGTGGTCAGAAAGTCAGGAGTCCTCTGAGGGGACCCTGGGGA-GGCTGGGAGG-CAGGCAGCC-GATGCCTGCGGCCACAGACTTATAAGTCTAAGAGGGGAGCCTCCGTTGGT---CGGGGGGCTGCAGGTCTCGTAGGTGAGGCTGGGCCCTTCCTGCTGGGGAAAAGCAGAAGGGTGAGCGTCAATGGCTGGGGAAG-AGTTGGGACAGGGTAACCGAGATCTGTGGCCAGCCAGGCAGAACTCAAGTTGACTTTCCCAGTCAGTAGACAATGCATTGCCTTCGGCTAAAAGGCACAGGTCACTCTGAA----AACAGGTCAAATGTTG-GAGCTGATGGGCTGGCTCTA---TGTCGG--GGGCTGACGAGG----TGGCTGTTAGCTACAGGTGTGCAA-------------TGTCAAGGATGAATGAGA--------TCCTCACCTTGCCTGCGAGCCCT--CAGGCGCTGGCAGAAAGGCAAAGGCTCTTAAG---TTGTCTAAAGTCACCA----------GTCAGAGCCTGGCTTTGCCAGCGCGATTCTCATGCTTGCCCTGTGGTGAATTTAG-TCGCCATGCTCCTAGGCTGGAAGGAGAAAGCTCTTATCTTGGCAGCATAGTTCAGAGT-------AGGTATG--------AAGAGGGGGTCCTAACGCTTCTGGCCCCTT-----CAGAGGCTGAAGACACCCTCTCCTAGTTCTTAGTCCCTACACTGTCAACAGTGG--TCTGGTGTCTCCAGGGAGCACCCACATCTACCGTCTTGGACATGAAACCTGTTCCAAGAGCCCTCAGTTTAAGCAA-GAAGGCCTTGAGTAGTGGCGCTGAGTCCCGAGGCTCACTGGAAAGGGAAGTGAGAGAGCCAGCTGGAAGAGGACAGGAAGAGGGA-GTCCAGAGCTGCAG---GAGAAGGAGGAGG-----GGCCTGGCTCAGGGGTCCCAGGT--GTCCTCAGCATGGAGCTGGTGCAGCGAGGAGGGAGGGGTAGACACACTGTTCATGCAGCAGGCTGAGAG-CATA-ACCTACCGTAGCTGACACTCCTCAGGGGTCACTGATAGTGATTCTGAAAGACAGCACGAAATCAACAGGGCAGTTCACAAACACACAGGTGGGCCAGGCTGGGGGTTAGGGGACACACACACGCACACGCCTGGGCGTGCACACACATGCTGTGAGGCCTTAAGGCCCTGCGTGCACACGTTAACACACATGCCCACA---AACACGCATATATCTCCCTC----CCACCTCCCAGTGCCCAGCACCATTGCCGGCCAATACGTCGTGCAGCACGGATCTGGGACATGCAGCCACTCAGCACACAGAAGCACACGCATGAGC--TGTCACAACACAGAAGCTCGCCTGCACAGAGAAGGCCTTTGCACCAGCTCCCTGCACATCCAGGCCTGGTGTGCTGACAGGGTTA-CCATAGGGCTCCGTAAAGGACAGGGCTTGCACTTTAGGATCCAGCt a score=8819 s hg17.chr15_random 442321 378 + 784346 gtgaagcagcatctctggactcccagtccagtgatcttgcccaatactttgcTGCTTGCCTATACCCCTCTAACTTGGTCAACAGCACATCACAGGGCAAGCCCCAATCCCTGCTTCATTTTTATATATGGGCGCTGGTCCCACAGCCCCACTCTCCAGCCATTTGGAAACAAAAACAGATGCTATTG-----------------TTCTTCCTTAGAGAACG----TGGCCAGTGGAGACGGCACA-------CTGGAAATCAGAGTGAATGTTCTTGAAAGAGGGTCACGGGTCAACAAGGCCCAGCCAAAGGATGCAGTAGAACCATTTTCCTTAGAAATCTTTGGGAGTGAAGTAGGCTTCAGCCACTCCCATCCCTGCCCTCGCGGCTACCACTACCCCATT s mm7.chr2 32318409 357 + 182548267 GTGAACCAGCATTTCTGGACTCCCAGTCCTGT----------------------CTTAACTGTTCC----------AGACATTAGAGTCCCACAGAGTAAGCCC--ATCCCTGCCTCGTTTA-GTGTATGGGGGCTAGGCCCCTAGCTCTGTCCTTCAGTCATCTAGATTCCCAGATAGATGCTTTTGGTCTATCAGATCATGTGTTCTTTCTCAGAGACCAGCCACAGTCAGCAGAAACAGGGCAGACTGAGTTGGTTACTAGAGTGAGCTTCCTGGAAGGCCAGTCATGGATAAAGAAGGCAAAGCCAAGGGATGAAGTATATTCCTTTTTCCTGGAGATCTCTAGCAGCAGGGTAGTCTTTG---------ATCCTTGTCCCTAC-----CCACCATCTGGTT a score=59316 s hg17.chr15_random 442758 1494 + 784346 CCAGGCTCCCTCTGTCCTAGCTCAGGTCTGGGTGCCATTCT-----TTACACTCGTGTGCTCGCTCACGCACACATCA-CACACCTTGCT-GGTCACACAGTCACAGACTCGCCTCTGCTCCTGTGGTCCAGTGGCCGGACA-CCCCCTGGGATGGCTCAAAGGAGTCAGGACTTGG--AAGTGGGGACATCAGGGTAGCT--GAAGGAAATCCACACACCCAGAGCATCTCGGAGTTCAGACTCTCAGACCTGAAGTAGGCGCCCCCGGGACTGGGCTAGGAGTTGGACGGAATGGAGGATGGAGGACAGCGAGAAGAAAGGAA--GAGAAATGCAACGTGTGGGCAGCCGCCAAGAG-----TGAAAATAGAGGGAAGTGTCATGCAAGTGCTGGACAGAAGGCGGCAGGTGGGACGAGCCCCACAGCCCCCTCCTCAAAAACGACCACCTCCAGGACTCAGTGATCCCTGGGGGGCAGGCTCTGCCAGCCCTCGGCCACACGTGGCTCCGGCACCCAT---GGTCCCAGTGCCTTGGATGGAGACGGCCAGTTCTGGCGGCCAGATGTGGTGCTCTGGAATCCAGTCCCATTTCCTTCCTGGCCACGCCTGTCCAGCGGCCTCTTCAGCCGCATTCAGCCCCTACTTACCTGGGGACCCC-----------GGCTGGGGCACGAGAGCACCAGGGGGGTAGGGCCCAAAGGGATCAGGGGAAGCCTCTGGCCTGGAGGGTATGGGGCACGCTTCCCCAAGGGCGGACCCGGCAGGAGGAAGCCCAGGAGCTGGGTCCTGCCGCCCAGGAGCTGGGCCCTGCCACCCAGGCCGGGCTAGGGACATGGCAGGGCCTGGGCAT-----CCTGACGCTGGACTTGGGCGACCTG--GGAGGCACAGGGAGGGGA-----------GAGATGGGCGACCCCGCCCCAGCGCAGTGCCGGCCACACCCCAAGGCGGTTGCCAG------AGCTTAAGCCCCGCCCCCAGCAGC----------GAGAACATCCCAGCTCCACACACCCCCCCCCCCCCCGGCAGCCAGTGCTCCTTGT---------------------------------CAAGCTCCCCCCGTCACTCCAGGTGGGAGCCACCCCGGTGAGGGGGTGTGCCACT---TGCCCCCAGGGCACTCCTCTGG-GCATCCCGGGT-GGGGGATTTTGGGGCCGTGGGGGGCAGTCTTTGGTACCTGTGTTCGTCAGGGATGCTCTG-----ACAACCAGGTGTCGTCCACGGGCGGGGGCATGGGCATGGTGACAGTGGTCCTGTTGATGTCACCGATGATGCTGAGCGCCTCCTTCAGCGCGTGGTGCATGTGCAGCATCTCGTCATGCTGCTGTGCCTGCTCTGCCAACTCCTCCATCAGTGTGTTCTGGTTCCCACATGAGTACATATTGGCCAGCGGCTCCGAGATGATGAACTCCGGGGTCTGAGAGTGGGCAAACAGGGAA-GAAGGTGGGACCTGGTGCCTGTGCCGCCCTGGGTGCCTTGGTGGGGCCTTCTGGGACTGTGCGCTGGACTTGGAGCCCCTTGGAGTATGGGTTTTCACATGG s mm7.chr2 32318805 1549 + 182548267 CCAGCTGCTTTCTATCCTAGTCCGCACCTGGGTGCCGATCTCACATTCACACCCGTGTGCACGCCCACATACACATCATCACACCTTGCTTGGTCACACAGTCACAGCCTGGCCT--GACACTGTGGGCCAGAGGCTGAACAGCATTCTGGGACAGCTCAAAAGAGTCAGAGCTGGGGAAAGTGGGG-CATCAAGGTAGCTCTGAATGTAACTGA-------AGAAAACCACACGGTTCAGAAACCTAGACCTGAGTTAGGCTCACCAGGAGCTGGGCCGGG---TCAGTGAAGAGTGGAATGGAGGAGGATGGAAGGCAAGGGTTTAAGAAATGCAAAGTGTGGG-AGCCACAGAGAGAAAATGAAAAAAAGAGGGAAGCGCCATGCAAGTGCTGAAAAGAAGGGGGCAAGTGGTTTGAGCCCCAGAGCCCCCTTCCCAGAAACGACCACCTCCGGGACTCAGCGCCCCCTGCGGGGCAGGACC-GCCTGCCCGTGGCCGCAGGTCCCTTGGCCTTGCATTACGACCCCAACGCCTAAGATGGAGAGGGTCGCTTCTGCTGCTAGGCCGAGGATCT-----ATCCGACTCTACCTCCCTCCGGGTTACGCCCGCCTGGCGGCCTTTCCCGGGGCTTTAAGCCCCTACTCACCTGGGGACCCCAGGCGGGGCGCGGTTGGGGCGCGAGGGCACCTGGGGAGGGGGGCC-AAAGGGGTCAGGGGAAGCCCCCGGCCTGGAGGGCACGGGGGGCGCCCCCCCCAGGGCGGATCCAGCAGGCGGAGGCCCAGGAGCAGGG---------------------CCCCGCGATCCGGGCCGGGCTGGGGGCACGGCGGGGGCTCGGCGCTGCGGCGTGGGGCTGGACGTGGGCGATCTACCGGCGACAAGAGCAGAAGAAGCGCGGAGCAGAGATGAGCGGCTCCGCCCCAACAGAGACCCCGCCCTCAGCCCAGGCTGTCCCCGCCCATGCAGC--AAGCCCCGCCCACAGCGGCCTTAGCGTGGGAGCCTAAGCCGGATCCCCAGCGGCGCCACCCACCCTGCAGCCAGCGCTCTTGGCAAGCCCCGCCCCGCAATAAGCCCCGCCCTCTTCTAAGCTCCTCCCCTCGCTCCAGGTGGGAGCC--CCCGAGACCCCGGCGCGCCACTGCCTGGTCCC--GGCCCTCCTCCCGCGGGCCCCGGGTTGGGGGGCTTTGGGGCCGTGGGGGCCGGCCCT-GGTACCTGCGTCCGGCCGGTACGCTCTGCACCTGCAGCCAGGAGTCGTCCACGGGCGGGGGCATGGGCGTGCTGACGGTGGTCGTGTTGATGTCGCCGATAATACTGAGCGCCTCCTTCAGTGCGTGGTACATGCGCAGCATCTCGTCGCGCCGCTGAGCCTGCTCGGCCGATTCTTCCATCAGTGTGTTCTGGTCCCCGCAAGAGTACAGGTTGGCCAGCAGCTCAGAGAAGATAAACTCCTTGGTCTGTGCACAGAGAAGGAAGGAAGGAAGCTAGAACCCGAAGACCCTGCCACCTTG---TCGCAGGCCAGACCTGCTGGATCTGGGTACAGAACTGGGAGC----TGGGGTTTGGTATTTCAGATGG a score=3875 s hg17.chr15_random 444369 86 + 784346 CAAGCTTTATTATCAAGGAGTCTTGTGGCTCCTACTTGAGTCTTACCCCATACCAGGAAGAGTTTAAGAACCCAGGGTCTTAGTCC s mm7.chr9 56911892 86 + 123828236 CATGCTTTAAGACCAAGGGGTCATTTAGCTGTCTCTTGAGTCTTCCCCCTAATCATAAAATGTTTAGGAATCCAGGATCTTAGGCT a score=2804 s hg17.chr15_random 444627 222 + 784346 CCATCTCTTTCCACACCCCAGTGGGA--AGAGGACTAGGGCTTGGTCAGTCTGCTGCTGTCATTGCTGCTCATTGCCACAAGGTGTCACTGTTGAACACCTATGTGGTGCAGTCTGGTGCTGATGGCTGTTGAGCTCTGCAGGTAGTGATGCCACATCCCTACAGAGATGCACCATACCAGGACTCC-AAGATCATGGTTCTTAGTGTTCTGCCTCTGCAGTTCC s mm7.chr9 56911983 189 + 123828236 CCATCTGCTTTCATGCCCCATTGTGACTGAGAGACCCTGGCCCTATCATCCTACAGCTGCCATGGCTTCTAGATGCCACAAGTCGTCACT-TTGAGC----------------CTGGGCCTG---------GAGCAGCAGATACAGTAGAGTC---------CATAGATGCTCCATGCTTCGGTTCCTAAGATC-TTGTACTTGGCCACCACCCACTCCAGTTCT a score=229512 s hg17.chr15_random 444994 4678 + 784346 ttttttCCCAGAACACAGAGCATCTGCCTGGGCTCCCTGTCCCTGAACAGTTAGCCTGGCTTCCTTCAGTGACCTCGAGAAACTTTGCCAAACTTAGGGGGACTGATCAACGGATTCTCAGTTACCCATTATTCC-AGGGGTGAAAT--CTAGATTCCAAGACAATATTTCTGGTGCTTCTCACTCAAGGAAAGAGGAGGAGAATTTAAAAATACAGGTTGGGTTTCTAGAAGAGCATCTTGCTATAtgtcagttccttgtgggcaaggaccacatctgattcacaccagggtccccagagcccatccaggcctggcccagagtttcctttggtgagtgtttggaggatgaataaaGAGATGGCAGGAAGGCAAGAGGAGTGGCACCAGAGGCCCTTGTCCTAGGTTTTCTGCTCTGGGGCCCCCTGTGGGGAACCCACTGTGCTTTTATAAGGGAAATGATGGATTCAAAGTGCTGCCCCCCATCTCCCATTCCCCGTCTCTCCTCAGGTCAGGCTTGTCCTGGGCCAGGAGGAGCTGAGGCTGCAGACCCCAGCAGAAATTCTACTGAGTGGCTCCGTCCCCCACACCACAGTTCTGACTGTCTCAGAGGACTGGCCCACATTGTCAGTCAATGGGTTTCTGAATGCCTCCTCTGTAGTCCTGGGAGC---CCCCCTAGAAGTCCCCTATGGGCTCTTTGTTGGGAGCACTGGGAGACTTGGCCTGCCCTACCTGAGGGGAACCAGCCATCCCCTGAGGGGTTGCCTCCATGCAGCCGCTCTCAATGGCCGCAGACTCCTCCAGCCTCTGACCCCCAATAAGCATGAGGGCTGTGCTGAAGAGTTTTCTGCCAATGATGATGTGGCCCTGGGCTTCTCTGGGTCCCACTCTCTGGCTGCCTTGCCTGCCTGGGGCACTCAGGATGAAGGAACCCTGGAGTTTACACTCACCACACAGAGCTGGCAGGCACCCTTGGCCTTCCAGGCAGCAGGCTGGCATGGGGACTTCATCCATGTGGACATATTTGAGGGCCACCTGTGGTCCATGGTTGAGAAGGGCCAGGGTACTGTATTGCTCCTCAACAGTGTGCCTGTGACTGACGCACAGCCCCACAAGGTCAGCATCCACATCAACATTCACCAGCTAGAAATCTCCATGGACCAGTACCCCACACG-------AACTGAGGAGTCCTCAGCTACCTGGAGCCACGTGACAGTCTCCTTCTTGGGGAGCTGGTTGCAGAGGCCTCTCATCACCTCCAGGAACACCGCTCAGGCCTGACACCAGGGGCTGCCAATGCCTCCCTGCTGGGCTGGCTGCATGGAAGACCTCAGTGTCAATGGCTAGAGGCAGGGGCTGTGGGAAGCCTTGCTGACGCACAACATGGTGGCTGGCTGCAGACTGGAGGAGGT---------AGACAATGCCTATGGCCATTATGAAGCTTTCTCCACCCTGGCTCCCAAGGCTTGGCTGTCCGTGGAGCTAGCTGAGCCATGCGTGCCTGAGCCAGGGCTACCTCCTGTCTTTGCCAATTTCATCCAGCTGCT----ATCAGCGCAGTGGTGGTGACCGAGGGTGGCACAGCCTGGCTTGAGTGGTGGCATGTGCAGCCCATGCTGGCACTGATGGAGGCTGAACTGCGTAAATCCCAGGTGCTGTTCAGCGTGACCTGAGGGGCACACTACAGCGAGCTCGAGCTGGATGTCCTGGGTGCCCAGGCATGAAAAATGTTCACCCTCCTGGACGTGGTGAACTGCAAGGCCCGCTTCATCCACGATGGCCCTGAGGACACCTCTGACCAGCTGGTGCTGGAGGTGTCAGTGATGGCTTGGTTGCCCATGCCCTCATGCCTGCGGAGGGGCCAAACAGACCTCCTGCCCATCCAGGTCAACCCTGTCAATGACCCACCCCACATCATCTTCCCACATGGCAGCCTTATGGTGATCCTGGAACACACACAGAAGCCTCTGGGGCCTGAGGTTCTCCAGGCCTATGACCTGGACTCTGCCTGTGAGGGCCTCACCTTCCAGCTCCTTGGCACCCCCTCTGGCCTCCCCGTGGAGCACCGAGACCAGCCTGGGGAGCCGGTGACTGAGTTCTCCTGCTGGGAGTTGGAGGCCGGCAGCCTAGTCTATGTCCACTGTGGTGGCCCTACACAGGACTTGACATTCCGGGTCAGCAATGGACTGCAGGCCAGCCCCCCGGCCATGCTGAAGGTGGTGGCTGTCCAGCTGGCCATACAAATCCACCGCAGCACAGGGCTGCATCTGGCCCAGGGCTCTGCCATGCCCATCTTGCCTACCAACCTGTTGGTGGAGACCAGCGCCGTGGGGCAGGATGTGACCGTGCTGTTCCGTGTCACCGGAGGCCTGCCGTTCAGGGAGCTGCAGAAGCAGGGGGCTGGTGGGGTGGAGGATGCTGAGTGGTGGGTCACACAGGCGTTCCACCAGCAGGATGTGGAGCAGGGCCACGTGAGGTACCTGAGCACTGACCCACAGCACTACACCGAGGACACCGTGGAGAACCTGGATCTGCAGGTGCAGGTGAGCTGGGAAATCCTGAGCAATCTGTCCTTCCTAGTGACCATCCAGAGAGCCACTGTGTGGATGCTGCAGCTGGAGCCACTGCACACTCAGAACACCCAGCAGGAGGCCCTCACCACAGCCCACCTGGAGGCCACCCTGGAG------------GAGGCAGGCCCAAGCCCCCCAACCTTCCACTGTGAGGTGGTTCAGGCTCCCAGGAAAGGCAACTTTCAACTACAGGGCACGATGCTGTCAGACGGTCAGGGCTTCACCCAGGATGACGTACAGGCTGCAGAGGTGACCTATGGGGCCATGGCACATGCCTCAGTGGCAGTGGAGGACACCTTCTGTTTCCATGTCACAGCTCCACCATATTTCTCCCCACTCTGTACCTTCTCCATCCATATTGGCGGTGACCCAGACATGCCTGTC---------------CTCGTGGTGCCCGAGGGTGGTGGGTGTGTCCTCTCTGCTGACCAGCTCTTCATCAAGAGTCTCAACAGTGCCAGGTACCTCTATGAGGTCATGGAGCAGCCCCGCCATGGGAGGTTGACTTGGCGTGGGACACAGGACAAGATCACTATGGTGACATCCTTCACCAATGGAGACCTGATGCATGGCCAGCTGGTCTAGCAGCATGATGACTCCGAGATCACAGAAGATGATATCCCATTTCCTGCTGC-CATCAGGACCAGAGCAGTGGTGACGTGGCCTGGGAGGAGGTATGGGGTGTCTTCTGAGTGGCCATCCAGCCTGTGAATGACCACGCCCCTATGCAGACCATCAGCTGCGTCTTCCACGTGGCCTGGGGTAGGTGGCGGCTGCTGACTACAGACAACATGGCCTTCAGCAATGCTGATTCGGGCTTTGCTGAGGCCCAGCTGGTGCTGACCCACCAGGACCTCCTCTCTGGCAGTATCATGGCCACGGATGAGCCCATGCAGCCCATCTGCCGCTTCATCCAGGAGGGGCCTCAGGAAGAGGCGAGTCCTGTTCACACACTC--AGGCTGACCACGGCTGGATCCCGCTGCAGGTGTCCGATGGGCAGCACCAGGCCATCACGGTGCTGGAGGTGCAGGCCTTGGAGCCTTACCTCTGTGTGGCCAATGGCTCCGGCCTCATGGTTCCTCAAGGAGGCCAGGGTACCATCAACATGGCCGAGCTCCACCTGGGCACCAACCTCAACATCTGCAGTAGGGATGAGGCCCACTACCACGTCACAGACAGCCCTCACTGGGGACAGTTGCTCCAAGCCACTCAGCCAGCCACAGCCTTCTCTCAGCAGGACCTGCTGGTTGGGGCTGTTTTCTATGGCCACAATGGCAGCCTCAGCTCCCGCAACACCCTGGCCTTCTCAATGGATGTGGGACCAGTGCACACAGATGCCACCCTACAAGTGACCATTGCCCTAGAGGGCCCAGTAGCCCCACTGAAGCTGGCCCAGCACAAGGAGATCTACATCTTCCAGGGAGAGGCAGCTGAGATCAGAAGGGACCAGCTGGAGGTGAGGAGCTGGAGGTGGTGAGCGGGGTGTGGACCAGGTAGAGGGCCTTCCTCCCAGCCTCCATGCCGGGAACACATGTGACTTGGGCTGTACCTGTGGTGGTCCCAG-CTTGTGTGTGTGCACGTGCCTCAGATGTGCTCCCATATATGTTGTGTTCCCAAGAGTTTCTGGGGAGCTTGCTGTACACCCATCCTCCTGGGAGTGGTGTGTGCCTCTAGAGCTGGTGTCCACTCATGTCCATGGCATGGCTGAGCATGcagattcctggacgccacccagccctacagaatctctgaagtggagcccgagaatctgcattgcagtca-gttccctggGAGGGCATCACGGGTCCTGAACTTTTGGGATTGCTGGCCGTGGAGACAGGCCGCTGCCTCTCAGACCCCTGTGTACCCCGCTCTCTTCTCAGAGCCCAGACCAGGACCAGGAGGGTCTGTCAAGGGCTTCTGCTCACCCAGGAACCCCACAGAGCAGCCACGGGCCTTCCAGAGATCTGACATGCCCTGTGACCTCAGGCCAGTCCTTGCCCGCTCTCAGCCTTACTCTTCCACACTGCTTATTTCGGAGACCCTTCTGGTCT---GCATCTGGAGCTTGGG---GCCCATGGTGAGCCAGCAgatctggcatcaggaa--ggcctcatgggaggaggcag s mm7.chr9 56912506 4495 + 123828236 TTCAAAAGGAGAACACAGACCATCTCTCTGGGTTCTTAGCCT----ACAGTGAGCCAAGCT--------------------ACTTTTGCGTACTAAGGGGG-TTCATTGGGGGATCCCAGAGTGCACATTACTCCCAGAGGTAGTTTTTCTAGAGCCCACAGTAGGTTTTCTGGCACTGCTCACTGGAGAGAAGAGAGGAAGAAGGAGACCAGGCAAAGTATTGCTTCAGGGGAGAACCTTGCTTTGTGTAAATCCCCAG-GGTCAGGGACAGTCTCTGAGCGACACTGGGG------------------------CCTTGACTCTCCCCAGTTGAA----------------------ACAATAGGGAGCTAAGGG-------------------TGTCCCAG---------TCCGGG---TTCTGAAGGGGGCTCAGTGTG--------GGGTAGACAGAAGTGTCA----GCCACTCCCACCCCTGACCTCTCTGTCTCTCTTCAGGTCAGACTTGCCCTGGGACAGAAGGAGCTAAAGCTGCAGACGCCAGCAGACACCGTGCTGAGTGACTCTGCCCCCCACACTGTAGTGCTCACTGTCTCCGACAGCTGGGCTGTGCTGTCTGTTGACGGAGTGTTGAACACCTCTGCTCCCATCCCAAGAGCATCCCACCTCAAGGCCACCTACGGGCTCTTCGTGGGCTCCTCTGGAAGCCTTGACCTGCCTTACCTGAAGGGAATCAGCCGACCCCTAAGGGGCTGCCTCCACTCAGCCATTCTCAATGGCCGCAACCTCCTCCGTCCGCTGACCTCCGATGTTCATGAAGGTTGTGCTGAAGAATTCTCTGCTGGTGATGAAGTGGGCCTGGGCTTCTCTGGGCCCCACTCACTGGCTGCCTTCCCTGCCTGGAGCACTCGGGAGGAAGGCACCCTGGAGTTTACGCTCACCACTCGGAGTCAGCAAGCACCCCTGGCCTTCCAAGCAGGGGACAAGCGTGGCAACTTTATCTACGTGGACATATTTGAGGGCCACTTGCGGGCTGTGGTTGAGAAAGGCCAAGGTACCATGCTACTCCGCAACAGCGTGCCTGTGGCTGATGGGCAGCCCCACGAGGTCAGCGTACACATAGATGTTCACCGGCTGGAAATCTCTGTAGACCAATACCCTACGCGTACTTTCAACCGTGGGGTCCTCAGCTACCTGGAGCCACGTGGCAGTCTCCTCCTTGGGGGTCTGGACACAGAAGCCTCTCGCCACCTCCAAGAGCACCGTCTGGGCCTGGCACCGGGGGCTGCCAATATCTCCCTG----GTAGGCTGCATAGAAGATTTCAGTGTTAATGGCAGGAGGCAGGGCCTCCGGGATGCCTGGCTGACCCGTGACATGTCAGCAGGATGCAGGCCTGAGGAGGATGAATATGAAGAAGAGGTCTATGGCCCATATGAAACTTTCTCCACCCTGGCACCAGAAGCTTGGCCAGCCATGGAACTGCCAGAGCCATGTATTCCTGAGCCGGGACTGCCTGCTGTCTTTGCAAACTTCACCCAGCTGCTTACCATCAGCCCCCTGGTGGTGGCCGAGGGTGGCACGGCCTGGCTTGAGTGGCGGCACGTGCAGCCCACCCTGGACCTGACAGAGGCAGAGCTGCGCAAGTCCCAGGTGCTGTTCAGCGTGAGCCAGAGTGCACGACATGGTGACCTGGAGCTAGACATCCTGGGAGCCCAAACCCGGAAAATGTTTACCCTGTTGGACGTGGTGAACCGTAAGGCCCGCTTTGTTCACGATGGCTCTGAAGACACCTCTGACCAGCTGATGCTGGAGGTGTCTGTGACTGCTCGGGCACCTGTGCCCTCCTGCCTGCGGAGGGGCCAAATTTACATCCTGCCCATCCAGGTCAATCCTGTCAACGATCCACCTCGCATCATCTTCCCCCACGGCAGCCTCATGGTGATCCTGGAACACACACAGAAGCCTCTGGGACCGGAGATTTTCCAGGCCTACGACCCGGACTCTGCCTGTGAGGGTCTCACCTTCCAGCTCCTTGGCGTCTCCTCTGGTGTCCCTGTGGAACACCGAGACCAGCCAGGAGAGCCAGCAACTGAGTTTTCCTGTCGGGAACTGGAGGTGGGCGACATAGTCTATGTCCACCGTGGTGGGCCTGCACAGGACCTAACATTCCGGGTCAGTGATGGGATGCAGGCCAGTGCTCCAGCGACACTGAAGGTAGTGGCCGTCCGGCCAGCCATACAGATCCTCCACAACACAGGGCTGCACCTGGCCCAGGGCTCTGCCGCAGCCATCTTGCCTGCCAACCTGTCAGTAGAAACGAACGCGGTGGGACAGGATGTGAGCGTGCTGTTCCGAGTCACTGGTACCTTGCAATTCGGGGAGCTGCAGAAGCAGGGGGCCGGAGGGGTCGAGGGCACCGAGTGGTGGGACACACTGGCCTTCCACCAGCGCGATGTGGAGCAAGGCCGAGTGAGGTACCTGAGCACTGACCCACAGCACCACACCCAAGACACAGTGGAGGACCTGATCTTAGAGGTGCAGGTGGGCCAGGAGACACTGAGCAATCTGTCTTTCCCAGTGACCATCCAGAGGGCCACAGTATGGATGCTGAGGCTTGAACCTCTGCATACACAGAACCCTCATCAGGAGACCCTCACCCCAGCCCACCTAGAGGCATCCCTGGAGGAAGAGGAGGAAGAGGGAAGCCCACAACCTCATACCTTCCACTATGAGTTGGTTCAGGCCCCCAGAAGAGGCAACCTCCTGCTTCAGGGTACAAGGCTGTCAGACGGCGAGAGCTTCAGCCAGAGTGACCTGCAGGCCGGTCGGGTGACCTACAGGGCCACAATGCGGACCTCTGAGGCAGCCGATGACTCCTTCCGTTTCCGGGTCACATCCCCACCCCATTTCTCCCCGCTCTACACATTCCCCATCCACATTGGTGGTGACCCAAATGCTCCCGTCCTCACTAACGTCCTTCTCATGGTCCCCGAGGGAGGGGAGGGCGTGCTGTCTGCCGACCACCTCTTCGTCAAGAGTCTCAACAGCGCCAGCTATCTCTATGAGGTGATGGAGCAGCCTCACCATGGCAAGTTGGCTTGGAGGGACCCAAAGGGGAAGTCCACCCCAGTGACATCCTTCACTAATGAGGACCTACTTCATGGCCGACTGGTCTACCAGCACGATGACTCTGAGACCATAGAGGATGATATCCCGTTTGTGGCCACACGCCAGGGAGAGGGCAGTGGTGACATGGCCTGGGAGGAGGTGCGTGGTGTCTTCCGAGTGGCCATCCAGCCTGTGAATGACCACGCCCCTGTGCAGACCATTAGCCGTGTCTTCCACGTGGCCCGGGGTGGACAGCGACTGCTGACTACAGATGATGTAGCCTTCAGCGATGCTGATTCAGGGTTCAGTGATGCGCAACTGGTGCTGACCCGCAAGGACCTCCTCTTTGGCAGCATTGTGGCTATGGAGGAGCCCACGAGGCCCATCTACCGGTTCACCCAAGA-GGATCTCAGGAAGAAGCAAGTCCTGTTTGTGCACTCGGGGGCCGACCACGGCTGGCTCCAGCTGCAGGTGTCTGATGGGCAGCACCAGGCTACTGCCATGCTGGAGGTCCAAGCCTCAGAACCCTATCTTCACGTAGCCAATAGTTCTAGTCTCGTGGTTCCTCAAGGAGGCCAGGGCACCATTGACACTGCTGTGCTCCAGCTGGACACCAACCTGGACATACGAAGTGGAAATGAGGTCCACTACCATGTAACCGCTGGTCCTCAGTGGGGGCAGCTGCTCCGGGATGGCCAGTCAGTCACCTCCTTCTCCCAACGGGACTTGCTCGATGGGGCCATCCTCTACAGCCACAATGGCAGCCTCAGCCCCCAAGACACCCTGGCGTTTTCTGTGGCAGCAGGGCCAGTACACACTAACACCTTCCTACAAGTGACCATTGCCCTCGAGGGTCCCCTGGCCCCACTGCAACTGGTGCAGCACAAAAAGATCTACGTCTTCCAGGGGGAAGCGGCTGAGATCAGAAGGGACCAGCTAGAGGT---------AAGGCAGTGCACGAGGCCTG--CCAAGCTGAGGGT----------ACTTCCATGAGGGGGGC----------------GTTCCTGTGGGGATGCAGGTCTTAGGAGTAT-TACA-GCTTCAGTAGT-CACCTGTATGTGTTGTAGTTCTGCATGTGTCTAGGAA------CATACACCTACCTGTT---AAGTGTCACGCACCTCCAGAGATCACATATACATGTGTCCTTGCTATGGATAGCCGTGTAAAAT-CTGGGTTCCAGCCAGATCCACAGAATCTCTGAAGCAGAGACCAAGAGTGTATATC-CTGTCACAGTCCCTATGAGGTTACCATGAGGGGTGACCTTTAGGAG---------------------CGCTGCCCCTCAGATCCACAGGTCCTTAGCTCTTTCCCTAGACTCCACAACAGAACTGTGAGGGCCTGT-GATGGTGTCTGTTAACTCAGGGAGCTCACAGCGCA-------------------------ATGC----TGACC-------------AGCTGGCTCACTGCCTTACTGTG----AAGGCCCAGTTTTGAGGCCCTTCCAGTTCTGAGTGTTTGGACTTTGAGAAAGACCATGACTAAACA----------TGTCAGGAAGTGTCCACACCAGAGGAGGCAg a score=31085 s hg17.chr15_random 450491 579 + 784346 AGATCAAGGCTGTTCTGGCTGCTTAGGGCCACAGTGGGCCCCTCTGAGACCCCTCTGCATTCCCTTGTGAGTCCTCATGACCTCTGTTAACCAGGTAGCCCAGGAGGCAGTGCCGCCAGCAGACATCGTTTTCTCAGTGAAGAGCCCACCGAGTGCCGGCTACCTGGTGATGGTGCTGCGTGGCATCTTGGCAGATGAGCCACCCAGCCTGGACCCCGTGCAGAGCTTCTCCCAAGAGGCAGTGGACACAGGCAGGATCCTCTACCTGCACTCCCGCCCTGAGGCATG--------CCTTCTCGCTGGATGTGGCCTC-GGCCTGGGTGCTCCCCTTGAGGACGTCAC-GTGGAGCTGGAGGTGCTGCCTGCTGTCATCCCCACTGGGGGCACAAAACTTCAGCAGTAGAGGGGGCACAGTCGCAGCTGCACCCTGGCCCCTCCACTGCTCCGCGTTGCCAGGTCCTGCTTCCCCACTCTCCCGGGCCTTGGCCTGCAGGTGCTGGAGCCACCCCGGCATGGGGCCCTGCAGAAGGAGGATGGGCCTCAAGCCAGGACCCTCAGCACCTTCTGCTGGAGAGAGGTACGG s mm7.chr9 56917647 565 + 123828236 CGACCGAGCCTGTTCTGCCACCTGAGGTCCACAACAG-----CCTGTGACCCC-------------GTTTGTCCCCATCGTCTCTGTTGACTAGGTGGTCCAGGAGGCAGTGCTGCCTGCCGACATCATGTTCTCGTTGAGAAGCCCCCCGAACGCCGGCTACCTGGTGATGGTGTCCCACGGCGCTTCAGCAGAGGAGCCGCCCAGCCTGGACCCTGTGCAGAGCTTCTCCCAGGAGGCAGTGAATTCAGGCCGGGTTCTCTACCTGCACTCTCGCCCTGGAGCCTGGAGTGATTCCTTCTCCCTGGATGTGGCCTCGGGCCTGGGTGATCCTCTTGAAGGCATCTCTGTGGAGCTGGAGGTGCTGCCCACAGTCATCCCC-CTGGATGTTCAAAACTTCAGCGTTCCCGAGGGCG-----GCACCCGGACGCTGGCCCCTCCTCTGGTCCAGATCACTGGGCCTTACTTCCCCACGCTGCCAGGCCTTGTCCTGCAGGTGCTAGAGCCACCGCAGCACGGGGCCCTGCAGAAGGAGGATCATTCTCAAGATGGGAGCCTCAGCACCTTCTCCTGGAGAGAGGTACCG a score=19237 s hg17.chr15_random 451553 757 + 784346 ggtccccattttccaccaatggaagctgaggccctaaaagggtcagtctcttcctgcacccaaaggcaGAACATGAAGGGTACT-------------------------------GCTGGGGCCTGACTGCCAGCCCTGGGCCTGCCCCTAGGTGGAAGAGCATCTGATCCAGTACCTGCACGATGGGAGCAAGACACTGACGG----TTTTGTCCTGATGGCTAATGCCTCTGAGATGGACCGCCAGAGCCATCCTGTGGCCTTCACTGTCACCATCCTGCCTGTCAATGGCCAACCCCC-GACCTCA-TACAAACTCAGGCCTGCAGGTGAGCATATTCCTGGGACCACCCCCCATGTCTGCTTTGAGAAAGAGGCCAATGTCCCCTACTTCCCGGCACAGATctcccccactctgagcctcagtttcctcctctgcaaaatgaggacactactgtgtgcctcacgcagttgttggaaggagagatgtgagattgtgcTG-AAATAGAACACAGGTGGGAGGTTTTGTTATTGGACATTTGCAAGTACGGTAGGCAGACTTCTGAGCAGCCATGGGTGGCTCTG-------CTGTTC----------CTTCTCCTGTGGCTTAGGACCAGAACACCTGAAAGAATCACTTACAAGCCCTTAAGGGCTGGCGTCAGGGTGGGACCGTTAAGCTTCCCACCTTCACCCCAGCAAGTGGAGGCCTCAGCTTGGCTTCCCAAACTCCTGCCCCTTGTCCACAGCAGAGCAGGGcccccatttggcaaaggtggaagttgaggcccagagatggg s mm7.chr9 56918508 688 + 123828236 CATACACACTTCTTACCTGTGGAAAT--GTGTTCTAAAGGGATCTGTC---TCCTGTACCTAACAATGGGACGTTAAGGGTGCTGGTCCCAAGATCCCTGTTGAGTCTTGGGCTAGCTGAAGCCTGACAACCAATCCTGGGTCTCCTCATAGGTGGAAGAGCAGCTGATCCGCTACGTGCATGATGGAAGTGAGACACAGACAGACGCCTTTGTTCTGCTAGCTAATGCCTCAGAGATGGACCGCCAGAGCCAGCCCGTGGCCTTCACGATCACCATCCTTCCTGTTAATGACCAACCCCCTGTTCTCACCACAAACACAGGCCTGCAAGTGAGTTCACTCCTGAACCTA--TCCCATCTCTGGTCCCAGAAAGAGACTAGagtccctt------------------------ctctctggctcagtgtcatcctctgtgaaatgggttcactaccacaaac------------ttggaaggagagatgtgaTACAGTGCTGAAAACAAAACGCAGTTGTGAGGTTTTGTTACTGGGCAGTCTTGGTTTAGAAAGACCATCCT-----TGACCTTGCCTGTCCTTGGACCCACCTGTTCACAGAAAGGTTTTCCCTCATGTCTCAGGCCCAAAATACCTAAAGAAATGTATTATAAGTCCTGTATTGTGGGCTGCAGGTTGGGAGCTCGAGGGT------------CACAGCAAATAAAGATCACAACGAAGCTTC----------------------------------------------------------------CCTATATATAGG a score=503 s hg17.chr15_random 452437 36 + 784346 CTGAAGGTTCCGCAAGAGGGCTGACTTGGGCTGTCT s mm7.chr9 56919196 29 + 123828236 CTGAGGGT----CTAGATAACTAA---GGGATGCCT a score=59110 s hg17.chr15_random 452579 3256 + 784346 AGGCTGGGATGGCTGTGTGGCAGTGCGGCCACCAGGTGGTGCCATCTACCCGTGTTTG-TTCCGGGAGCCCAGTGATGGGGCCCTGCCTCCCACAGTATGGCCCCTCTTGCCAAGGCTCGGCCTGAGGGCTCCCTGCGGCCAGGGGAGGAAGCCCAGGAATGCCAGAGGGCTGTTTTCTGGGCATGTGAGTCCCACTGCAGCACTGCCCACAAGTAATTGACCCAGCAAGAGTGGTACCAGGACCTCAGGAACGGGTGCCTGTTCTGCTTGCTAGTGGGAGGCCTGAAAAGGGGCCCCCTTTGCCCAACACGAGGAGGGCCCGTAACTGCTCTGGAAGCACCTGGGCCCATCCCAGCACTGCTTCTGTGCTGCAGGACAGTGCCAACCATCAGGCTTCAGCTCTCTG-----CGCCTCCCACCCCTCCCTTAGCTGGAAGGAGTGCTCGTTTCTAAA------------------ATCACTGTTCCCA-CCTGTGCCCAGCCCCTGCCA---GGCACA---CATGGAGGGTCTGAAAGGAGACTGCTGCCCCACCAGTGAGCTAGATTAAGGAGCACTGTTGGTCAGCGCTGGGGGTTTCTGGGGGTGAGAACTTGGTGACGGTAAGAGCTAGGGCCTTCCTGGGTTGG-GTACACAAGCTGGTCTTGAGGGACACACAGGACTAGGACAGATGAAGAGCAGGGATGCTGGGCCTGGAGGGTGGCCTTCCCTGGGGTGACAGGGAAGGTGAAT--GCAGGGAGGCCATTTGTGCAGGGGAGCCACAGCAGCGCCAGCCTTGATGCCACCTGAGGGCCTGAGCCTCAGTGGGGTTGGAGCCCTGGTGGCAGCCCAGGGCCGGGGAGGAAGGGGTGGGTAAGTGTGGCA------GGGCAGAACCTTCACAGGCCTGTGTCCCCAGATGTGGGAGGGGGCCACCGTGCCCATCCCTACAGAGGCTCTGAGGAGCATGGATGGTTACTCTGGGCCCAAGGACCTGGTGTACACCATTAAGCAGCCCAGCAATGGGTGGGTAGTGCAGTGGGCGGTGCCGGGCACTGAGGTGCGCAGCTTCAAGCAGACCCAGCTGGATGGTGGGCTCGTGCTGTTCTCACACAGAGGTGGGTGCTGAGGGCCGAGCCCCAGGTTTCTGCTGCCCAC------GGGGGCACCCTGAGGTG-GGGAGCCAGTTCAGGCCAGCTGGACCCAACAC------CCTTGTCCCCAGGGGCCCTGGACGGAGGCATCCACTTTGGCCTCTCTGACGGTGAACATACTTCCTCCAGACACTTAGCTTCTGAGTGACGGCCCAGAAGCAAGTGCTTCACTCGCTGGAGGGCAGCCGGACACTGA----CTGCCCAGGTGGGTGTGCTGATTGTGGGCGTTCCTGGGTGCGGGGGGCTGGGGCAGAGCTGAGGGTGGCATGCCAGGGTCACACTGCCTCTCTGCAGCCACAGGCCTCGGCCTGGATCACAAAGGCTGATGGCCCCTTTTGCCTCTGGCAGAGTCCGTCCAGCCACTCAGCAGCCAGAGCCTCAGAGCCAG--------CAGGCACCGACCCCCAGCTCCTGCTCTACCATGTGGTGCGGGGCCTCCAGCTAGGCCGGCTCTTCCACGCCCAGCATGACAGCACAGGGGAGGACCTGGTGAACTTCACTCAGGCAGAGGTAAGGGCCCCACTCTGCAGCCACCACTCAGATGC--GCCCAGCCTCAGGTGGCCACTGTGCCATGGACATCATGTGGACATGGGCACCAGCTCCAGCATCACCGGCAGCAGACACTCCCAGGCCTGCCATGGTCCAGGACCTGGTGTCCTGCCCTCTAGGAGTCATCAGGCTGGCAGGGCAAGTTCATGTTCCCAGAAGGAGGGAGAAGAATGCAGGAAGTCGGGGATACAGGGCCCCAGAGCAGGGCTGGGGTCTTGGGGTGTGGCTTCCCGAAGGAAGCTAGAGCTGGACCCAAGGGTCTGGAGAGGGAGAACCATGTAGGGGCACTAGTGGCACCCCAGCAGCTGGTGAGGGGCAGTGCTTGGTGGGGGATGGAGTCGGAGGTGAAGCAGCTGCTGGGGCCTGTGGGCAGAGGTGTGAGCCTCGGGCTCAGATCAGGTGCCAGCCAGAGGAAGAGTGGATCCTAGGAGCAGATGAGCTGATGAAAGGCAGC-TGAGTCGGCCAAAAGGG----GGAAGCCACTGTTC--ATCTG---TCCTGG---------TGGCTTCAGAGAAGAACTAGAGCTCTCAGCCATGGGTAGTGGCAGACT----CTCTGTGGTAACTGTGCCACGGGGGCCAGCCCACTCATGGTTTAAATGAA----CACCTCTCCCCAAAGGCAGAATGGGAGTTGTTCCATAgcaggg--cagggcagggcagggcagACTCTTGTGGGCCGCCCT-GGGCAGGCAGCACACCTGATGCTCCCATCAGGAGGCTGCGTGAGCATCTGGACCCAGCACATGATCACAGTGAGTTCTCGGCAGGGAGCGGTCTTGTGGGGCGCAGAGCTGACTCTGTCACTCAGGAGCCACGGCAC-ACAGCACTGCCCCAAGTACCTCCAGAGGGGATCCCTGTCAGCCCTTGAAAATGGCAGAGCCCACC-CCAGCCCCCTTTTC---------AAGCTCCCTTGCTTCGGCAAGGACCTCCTGAGCCTG---------GCGCTCTCCCTCCTGAGAGGT--------------------------------------GCAGATGGTACTCAGCAAGT----------GCAAAGCCG-------------------AGGTTTCTTGGGCCTCTCACATC-AGCACCTCCCAGACCTCGGTTCTGTATTTCCCTGGAGCTCCACTCCTGCTATGGT----------GCCCTTCCCACAATGAGATATTCATCAGGCTGGTGTCTACAGCTGCTGCGTACCCTCAGTTGCTGGGAGCCTTTGTCAAGAATGCCCAGGAATGAGGAGGGCACAGGACCCAGACCATCAGCAACCCTCTTGCACTCTATAGTCCCATGTTACTCAGAGCTTCCCCATGCTCCAGCAAGATGAAGGACTAGATTGAATGGGCACCAGG--------CTGGCAGTGCCACCCAGGAAAGCTGGGAAGAGGCTACATG-----GGCTACCTGGCCCACTCAGGGAGG-AGGGCAGGACTGGGTATTGTCTT----GACAGCAACCCTGTcccacaacactgaactgggcagggaaggggtcaggtgtcctcatttttcagataagaaaactgaagctccca-gagggcaggtaaa-tgtattcagagcacatggcgagtaagaggcaaaTCTTCTGCCAG---CAAGTCCAGGATTTTTTTCACCAGAGGACATTGCTTGGTCCCCAGAGCTCAGGACCCTGTGTTTTGTCTCACTCCCACCCACAGAGC--TCCTGTATCCAGGCATCAAC s mm7.chr9 56919225 2989 + 123828236 AAGTTGGAAATGATGTGTGGTAAATTGGCCACTAGGTGGCAATATCCACCCATGTTAGCCCCCTGGAGTCCAACACTGG-------------------------TTTTAACTTACTCTCGGACTCTGGG-----------AGGGAGAAGCAGCTCCTGGGTTTTAGAAGGACGTTTTCTGAG-ATGAGGGCCTCGTACCCAGAATGGCCTC-AGTGACTGGCCCTGTGCCACATGGAACAGGG-CTCTGGAAGAAGACCTTGCCCTGCGTG--GGTGGGTAGCCT---ATGGGGCCTCCCCTGCACTGCACG-GGTGGATTCCTAGCCGAT---------------------TCAGC---------------TAGGA-----------ATCAGGAATCAGCTCTCCGCTCTCCGCCTCCCTCCCGAGCTTCAACTGGCAGGAGAGCCTATTTCTAAGTGTTCTGCGCTGGCCAACACCATTGCCTCTGTCCTGTGCCCA-CCCGCGCCAGATGGTATATGCCATGGCAGG--AGGAAAGGGAAGGCCCCCCCACCAGGG----AGACCCGGCAGCACCTTTGGTCAGGGACAGGGATCTCT-GAAGTAAGGACC------------AAACAGGAACATTTCTAGGCAGGAGGTTGTGGTCTGGCTTTGAGGTACAATTAAGATCAGGGCTGGTGGAGA--AGGAA-------------------------CCTGCGTGACAGAAAAGGAGAATGAGAAAGAAGGC----------------TCAGAATGGCACAGGTGTCCATGACAGCCGGG---CAGAGC-------AGGTTGGGGGCCTGGTGAAAGTCCAAGGGCCAGGAGGAAAGGGATGGAAAG---GACACAATGTGGACAGGACTTTCAC-GGTCTGTGTCCCTAGATCTGGGAGGGGGCCATTGTGCCCATCCCTCCTGAGGCCCTCAGGGGAACAGACAATGATTCGGGCCCAGAAGACTTGGTCTACACCATCGAGCAGCCCAGCAACGGACGGATCGCCTTGAGGGTGGCACCAGACACCGAGGTCCACCGCTTCACACAGGCCCAGCTGGACAGTGGGCTTGTGCTGTTCTCACACAGAGGTGGGTGCTGAG-----------AGGGTTCTCCAGCCTCCTGGGGTGGGGGTACCTTGAGGGGAGGGAGCTACCTTGGGCCAACAGGACCCAGCTCCACCCACCCTGTGCTCAGGAGCCCTGGAAGGAGGCTTCCACTTCGACCTCTCTGACGGCGCACACACTTCTCCTGGACATTT--CTTCCGAGTGGTGGCCCAGAAGCAGGCACTCCTCTCCTTGGAGGGCACCCGGAAGTTGACCGTCTGTCCAGGTAGGTCTGC------------ATGCTGGCT------AGCCGAGGCAGAATGGAGGATGGTAGCCCAGGACC------CTTGTCTG--------GGCTCCTGT--------CAAAAGCTAACAGGCTCCTCCATGCTTCACAGAGTCTGTGCAGCCGCTCAGCAGCCAGAGCCTGAGCGCCAGTTCCAGCACAGGCGCTGACCCTCGTCACCTGCTCTACCGGGTGGTAAGAGGCCCCCAGCTTGGCCGACTCCTCCATGCCCAGCAAGGAAGTGCAGAGGAGGTCTTGGTGAACTTCACCCAGGCTGAGGTAAGGGCCTCACTCCTCAGCCACCACACAGACCCCAACCTTACCTCAGGTGGC-----TGCCA--------------------GCTGGAGCATCCACCTCACTGGCAGCTAGCTTCTCTGG------------------------ATCCTG---------------------------------------TCCCAG----------------------------------------------------------CTCAGGGTTAGGCCTCCAGAAGGAAGCCACAGCTGGATCCCAGAGGCTGACAAGGG---CCCAGGAAGGAGGGCCAGAGGCACCCCAGCGGCTGGTGAGGGCATGAGCTCACTTAG-------------------------GCTGGACAGTTTGGGATAAAGT-TGAGCTTGGGACTCAGGAAAGATGCCAGAGAATGTAAGCAAG----CTGGATGCAGATGAG----TCCCAGGCAGAGTGGGCCAGTCTGAGGGACACTGAGATCTACTCTTCGGAGCAGAGTCCCTAGGGCACACCAGGACCACCGATCAAAATTATAATTTCCAGCCGCATGTTGAGGCTGACTGAGCGGCTGAGATGCCAGGGCTGTCGGTGCTAAC-------TAGTGTGAGCCAGCAGTCATCACTCTTCAC-----------GGATTGGTCCCCA-CAGGGTCTAAGGCACTGT-GAGCAG-CTCCTCTGGGCTACGGTAGAGCAAACAGCATGCTTGGTGCTCCCACCTAGAGGCCACGTGGTCA--------CAG--CATGACCCCTATTCTTTCTACAT---GAGCAGGATCCAAGAGAACATGGCTGGCCCTGCCACT--GGATCTGCAGCACTATGGTGCTGCTCCAAGAACTTTCCAACAGGGCTTACCCTGACCCTTGAAAAGGGCAGGACCCACCTCCGGGTCCCTTTCCAGCACTCAGAGGCCTCCTGGGCCCCACAAGTTCCTTTCTACCCCATCAGGGTGTGCGCT---CCTCCTGAGAAGTACTGGAACACAGAGGGGGGAGGTGCGGGGTGTGGGGGAGCAGCTCCCACCCAGCAGGTAGCTCAGAGGAGGAAGCTGCCTTAAAGAGGGTCAAGTAAGATTCCTCAGACCCTGCACTTCTTTTGCTTCTTTGGCTTCTGTTCTCACTTCTCCCAGGCCCTAGCATCTACCATAGCCCCTTTCTGACCCCTCCCCACAATGAAATCT-------GCCAGTGGCTAGGGCAGCTGTATGTCCTGAGTCACTGGGAGCC-TTGTTATCAGAGTCCTGGAAGGAGGAGAGGCTGGGA--CAAAGCCACGGTGCCCCTCCCCCACCCAGCAGCACA----CACACACCCCCCCCCCATGCTCCAGTAACACGAAGGACACAAGGCTGTGGCCACCAGGGGGCCAGACTGGCAGTGCCACCCAAGAAGGCTGGAAAGAGGCTACGTGGCACAGACACCCTCCTCCCCTGGCAGAGGTCAGGCAGCAGTAGGCAGTGGATTGACAGACAGTACCACTGCCCTTCAAGAC---ACTGGGC-TAGAAGGGCTCAGGTAACCTCAGTTTGTAGATAAA------GAAGTGCATATGCAGTCTGGTGACTTTTATTCAGTAT-CATGGCTCGTAAGAAGCAAG------ACCAGGATTAAGCCTTGAGTTCCCTTCACCTAAGGATACT-----GTCCCCGCACCT----GGCCCGAGTTTTGCCTTTTGCTCGC---TAGGGCCTTCTCGTACAGGAGCACCAAC a score=48688 s hg17.chr15_random 456118 1367 + 784346 GAGTAGACAGGTGTCCTCTTGGCATGATAAGTCTTAAGTCCCCTCCCAGATCtgtgacatttgacaggtgtcttttcctctggacctcggtgtccccatctgagtgagaaaaggcagtgggGAGGTG---------GATCTTCCAGTCGAAGCGGTA--TAGAAGC--CCATGTGAAAAGCCATACTCCAAGGGGCTCCAAGTCCAGCGCACAGTCCCAGAAGGGC---CCAGCAAGGCAGCCAGGGCGGCACAGGCACCAGGTCCCAACCTTCTTCCCTGTTTGCCCACTCTCAGACCCCGGAGTTCATCATCTCGGAGCCGCTGGCCAATATGTACTCATGTGGGAACCAGAACACACTGATGGAGGAGTTGGCAGAGCAGGCACAGCAGCATGACGAGATGCTGCACATGCACCACGCGCTGAAGGAGGCGCTCAGCATCATCGGTGACATCAACAGGACCACTGTCACCATGCCCATGCCCCCGCCCGTGGACGACACCTGGTTGT-----CAGAGCATCCCTGACGAACACAGGTACCAAAGACTGCCCCCCACGGCCCCAAAATCCCCC-ACCCGGGATGC-CCAGAGGAGTGCCCTGGGGGCA---AGTGGCACACCCCCTCACCGGGGTGGCTCCCACCTGGAGTGACGGGGGGAGCTTG---------------------------------ACAAGGAGCACTGGCTGCCGGGGGGGGGGGGGGTGTGTGGAGCTGGGATGTTCTC----------GCTGCTGGGGGCGGGGCTTAAGCT------CTGGCAACCGCCTTGGGGTGTGGCCGGCACTGCGCTGGGGCGGGGTCGCCCATCTC-----------TCCCCTCCCTGTGCCTCC--CAGGTCGCCCAAGTCCAGCGTCAGG-----ATGCCCAGGCCCTGCCATGTCCCTAGCCCGGCCTGGGTGGCAGGGCCCAACTCCTGGGCGGCAGGACCCAGCTCCTGGGCTTCCTCCTGCCGGGTCCCCCCTTGGGGAAACGTGCCCCATACCCTCCAGGCCAAAAGCTTCCCCTGATCCCTTTGGGCCCTACCCCCCTGGTGCTCTCGGGCCCCAGCCG----------GGGTCCCCCAGGTAAATAAGGGCTGAATGCCGCTGAAAAAGCCCCTGGACACGCGTGGCCAGGAAGGAAATGGGACTGGATTCCAAAAAATCACATCTGGCCGCCAGAACTGGCCGTCTCCATCCAAGGCACTGGGACCATGGGGT--GCCCGAACCACCTGTGGCCCAAGGCTGGGCAAAACCTGCCCCCCAGGGATCACTGAATCCTGGAAGTGGTCCTTTTTTAAGAAGGGGCTGTGGGGCTCATCCCACCTGGCACCTTCTGTTCAGCACATGGATGACACTTCCCTCTAATTTCA-----CTCCTGGCGGCTGACCACACATTGCATTTCTC--TTCCTTTCTTCTCGCTGTCCTCCATCC s mm7.chr2 150227750 1427 - 182548267 GGGTAGGCAGTTGTCCTAGTGACAGGCTATATTCTGAGTTTCCTCCCGGATCTGAAGCCTAGGGCAGGTGACTTCCCT-----ATCCCGCTGTGTATTCTTGTCTGAGAAAAGGACATTAAGATGGGATTTGAAGAGACCTGCGAATTTAGGCATCAAGCAGAAGTAGCCATCTGAAATACCAAACCCCA----GCTCCCAGTTCTGTACCCAGATCCAGCAGGTCTGGCCTGCGA------CAAGGTGGCAGGGTCTTCGGGTTCTAGCTTCCTTCCTTCCTTCTCTGTGCACAGACCAAGGAGTTTATCTTCTCTGAGCTGCTGGCCAACCTGTACTCTTGCGGGGACCAGAACACACTGATGGAAGAATCGGCCGAGCAGGCTCAGCGGCGCGACGAGATGCTGCGCATGTACCACGCACTGAAGGAGGCGCTCAGTATTATCGGCGACATCAACACGACCACCGTCAGCACGCCCATGCCCCCGCCCGTGGACGACTCCTGGCTGCAGGTGCAGAGCGTACCGGCCGGACGCAGGTACC-AGGGCCGGCCCCCACGGCCCCAAAGCCCCCCAACCCGGGGCCCGCGGGAGGAGGGCC--GGGACCAGGCAGTGGCGCGCCGGGGTCTCGGG--GGCTCCCACCTGGAGCGAGGGGAGGAGCTTAGAAGAGGGCGGGGCTTATTGCGGGGCGGGGCTTGCCAAGAGCGCTGGCTGCAGGGTGGGTGGCGCCGCTGGGGATCCGGCTTAGGCTCCCACGCTAAGGCCGCTGTGGGCGGGGCTT--GCTGCATGGGCGGGGACAGCCTGGGCTGAGGGCGGGGTCTCTGTTGGGGCGGAGCCGCTCATCTCTGCTCCGCGCTTCTTCTGCTCTTGTCGCCGGTAGATCGCCCACGTCCAGCCCCACGCCGCAGCGCCGAGCCCCCGCCGTGCCCCCAGCCCGGCCCGGATCGCGGGG---------------------CCCTGCTCCTGGGCCTCCGCCTGCTGGATCCGCCCTGGGGGGGGCGCCCCCCGTGCCCTCCAGGCCGGGGGCTTCCCCTGACCCCTTT-GGCCCCCCTCCCCAGGTGCCCTCGCGCCCCAACCGCGCCCCGCCTGGGGTCCCCAGGTGAGTAGGGGCTTAAAGCCCCGGGAAAGGCCGCCAGGCGGGCGTAACCCGGAGGGAGGTAGAGTCGGAT-----AGATCCTCGGCCTAGCAGCAGAAGCGACCCTCTCCATCTTAGGCGTTGGGGTCGTAATGCAAGGCCAAGGGACCTGCGGCCACGGGCAGG--CGGTCCTGCCCCGCAGGGGGCGCTGAGTCCCGGAGGTGGTCGTTTCTGGGAAGGGGGCTCTGGGGCTCAAACCACTTGCCCCCTTCTTTTCAGCACTTGCATGGCGCTTCCCTCTTTTTTTCATTTTCTCTCTGTGGCT-CCCACACTTTGCATTTCTTAAACCCTTGCCTTCCATCCTCCTCCATTC a score=26519 s hg17.chr15_random 457825 869 + 784346 CTCCCACCCTCCTGCAGCTGCAGTACCTGATGAGCAGGATGGCAGTGTCATGCTGCAGGGGGTGGGCGTCTCCCTTCATGTTGATGCTTTTCTGCCACTTGCAGAAGCTCTTCAGGGTGTTGTCTGCATGGTGCATGATCTTTAGGTCCTCCTGGGGGCAGAGAGAGTGACTGCTCATGCCTC-CCCTGAGTTCCAAGAAGGTCAGGCCCAATTCTCCCCCATACAAAGGCAGGAGACAGAGGCCCAGCAGGGCAGTGGGAGGCCCGCAGGC--ACCAGTCCAGCTTCCGGCCTGACCATCCCTCCTGTAGGAACCTCCTGCAGGAGACCTGGGACCTGAGAGAGGGTCAGTCAGGAACCAGGGAGTGGCAGGGGACACAGTCCAGTCCAAGGAGGCCTTCACTGTGCCCTTCCATACAGAGCAGCACAGGTCATGGGGCAGGAGGGCTCTGGCAGCCGAAGCCATTGCCAGGCAGCGTGGGACCACATGACCGCTCACCTCCTCATCTTCCAGAAGGACCAGGAGCACAATGGTCATGTGGATGGGGTTCCCAATGCTGGGGTCGTGAAACAGGCCAGCCACCTGCCCAAGAGATGAGGGG------GTCAGGCTGTCACCAGGATGAAGGATACAAGCAGCCAATGCCCACCCCAAGCCACCCACCCACCCAGGGCAATGCACACCTGTGCTCACACACAGGGACGCTCACACGGGTGCACACAGGCTGCACAGCGGATAGGCAATGCACATGCACCAATGCATGAGTGTCCCCACACCT-CACACGCACTGCCCCAATGTGGCAGCAGCAGAACCTACAGAGGACAAGAGGCCTCCGACGCCCCTTCCCAGACCACAAATCTTTCCTagaccacag s mm7.chr9 34021208 799 - 123828236 CTCCCACCCTTC--CTGGTGAGATACCTGGTGAGCAGGATGGCAGTGTCATGGTGCTGTGGGTGGTCATCCCCCTTTATGTTAATGTTCTTCTGCCACCTACAGAAGTTCTTCAGAGTCTCTTCGGCATGGTGTGTGATCTTTAAGTCCTTCTGCAGAGGGGAAGAATAGTGGCTCAGGACTCATACTGAGCTCT--GGGGATTAAGCCCAATCTACTCCCACACCATGACAGGAGTCAGAGATTAAAGAG---------------ACAGACTGACCAGGC---CTCCCAGCCT--CCACCCCT-CTGTTGTAACT----------------GGAC---AAAGATTGTC--TCAAGGA-CAAGAAGTATCAGAGGACACTGTCAAGGTCCAGGAGGCCTCTACT-TGTCCTTCC---TAGGGCA-CTCAAGGCACAGAGCTGGAAAGCTTC-----------CTGTTG-GGGACAGCTTGGGACTATGTGACCTCTCACCTCCTCGTCTTCCAGTATGATAAGGCGCACAATGCTGATGTGAATGGGGTTCCCAATGCTTGGATCATGAAAGAGTCCAGCCACCTATCCAAGAGGGGCGGGGAGAGGAATCAGGTTACAACTAGGATATAAGAAAT-GGAACCCAGTACCCACTCCAG---------CCACCCGGGACCATGCACATCTGATCACACAAATGTGATCACACAAGGGAGGGCATACCAGCTGCACACATTACTGCAGACATGTATGCACTAGTGCCTGCACATCTCCATACCTGCACTCACACTGCCCCAAGCCGGCAGTGACAGATCACA------ATCAAAATCCTTCCAGGTTGCTTCCTAGGGCTCTGGCCTATTCTGGGCAATAG a score=5895 s hg17.chr15_random 461118 331 + 784346 AGGTCCCAATAATAGAGGTTAGTTATTCTAGGGTGGGAGCAGGGTGGCATGGGGAGG--GAGGTTCCTGGCTAATGGCCCTGTTGGAGCTGGGCATGGCTCACCTGGTCTGGACACTGGAGGGAGAATGGCTGGCAGAGCCAGG--TGCCATAGGCTTGGTGGGGAGGGAGCAAGAGGGAGGTTGAGCCCCAAGGTGGGAGAAGTAGGTGAGATGGAGAGAGGGAGGTCAGTCTAGGGGACTGACTGGGACAGGCCTGAAAGGCAGAGGACACAGTCTTGTGGCACAATTAAGGGCACACGCTATAGTGATGTATCCGTCTGTCTGTCTGTATCC s mm7.chr9 34025087 300 - 123828236 AGGCCCCAATAGTACAGGTTGGTTAGTCTGGAGTCAAAGCAGG-----AGAGAGAGGCAGAGGGTCCTTACCAGTATCCCTGCTAGAACTGACTATAGGCAGCCCAACC-----ACTGGAGAAAGAATGATTGACGGAGTCAGAGACACCATAAGCAATATGTAGAGAGAGTA---GAGGAATTA----TCAACGTGGACAAGGAAGATGAG-TAGCAGTAGGAGGGCTAGTC-------CTACCTG---CAGAAGCGTCAAGCCCATGCCACAGGTTAATGGAACATCAAAGA-------CTAGGGTGGTATGTCTGTTTAAATGTTTGTGGCC a score=41981 s hg17.chr15_random 461449 1933 + 784346 TCTGGTCTAAGGGACACCGAGCATGGGCATGTTACGAGGGGCTTCTAGAAAGGCC-----CCTTCATGT---CCCCAGGCCTAGCACCTGCCTGAGAACTGGGAGTAGAAGAGCATACCTTGCACCCCACAGGTACTTGGAGCACTGGAATCACCCCGCTGTGCCAGCCTCTCCGGGGCCGGATGCTTGTACACCACATGGGGCTGGGCATGGCTGGGCCAGGCTGGGGCACCGTCCAGGGGCTGAATGAAGTAGTCCTTGTTGGAGAGCAGGAACACACCTTTCTAGGGAAGAAGCACCAGGGTCACACAGGGAGGGCTGGCCCTCAGCTGCTCTTCCTGCACGTCCCAGA---GGcccatcctgctcagctgagcccccactgcccacatcatctgtgactgcccacagacaccc--tgcactttccgcctgctgggcctttgctcactctgtagcctccatctggaaagcccttctctgccatttcacacacagccaaac-cttcaaagcggagctc-----------agaagcctc------cgcccctggggatgctgcccCACACACCCACCCTATTAGGAGAGGAAAACGGGTCTGCACCCAAATCTGACAAAATGGTGTCTTCCAAAGTCCCAGACAGCTGTCCTGAGCAGGGCAGCTTGTGCCCAGGCCTCCAGGCTATTCTGCGTCTTCTCTGCAGGCCAGCCATTTCCAGC-ACTGTGCTCCCTCCCAGCTGGCCAGGGCTTCTGACCTTC--CCTCTATCTCCCTAAGGCAATGAATCACTCCAAAAGCATCCACACCCACACCCGAGTGGCGGAGATGCCCACGGCCACCAGGACACCCTGTTCTCTGGGCCCAGGGCTGCCCAGAGAAGGGAAGCTGGCAGGAGTGTCTTGGACATGTCCGCC-AACATTCAGAGTCCAGGGAGGGGAGGGGCCCCAGGAAGCATCTATGATGCCCACTACCTCCTGAGGAAGCTCAGGGCTCCAACAGGAAAGAAGGTTTTACATCCCTCGGACTTCCCCTCATAGGCACCAATTCTGCCCCTTGAGTCACACAGGACCAGGGGGCCTGGAGGGAGGGCtggagagtgcatcagctcttgggtctggagacctgggtatgaatgcgaagtccccccctcccgcccaccactcactgaatgactaggtgagcctgggcaagttcccctctgagcctgtttcctcatctgtgaaatgggaatgatgccccatgtgcacagctgtggcacaggctcaacaagatcaattgtacattaagggacaggcacagGCTCCATAAATGGGAATACTGTGCAGGGCAGATGGGCCTTCAAAGGTCCAGACGTTGTGCAGCTTGCGTTGTGGGCTGCCCTGTCATTAGGCCCTGTGCGGCCACAGCCCATGGTTTTTGCCTGAGCAATCTAAGCTGAGGGCCTCCTGGGAACAGTGGACG-------CTGAGAGTGTGCACACATCCCCTACTCCTCCCAAACCCCCACCCTCCAGAGCTGGGAGAGTGGGGCTGGTCACCTGAACACGAACAGAAAGGGGCCCTACTCTGCCTGGAGTGGAAGCTGCTCTAATCAGCACCCAATCAGGGAGCAATTAGGGCTGCAGTAGCCAGCACCACCCTTCAGCCAGTCGAAACCAGGAAGCTGAGGCCTGCTTTTCCCGGAGCTCTGATCCGAGCAGAGG--GGCTGAAAGGGGTTCCTCACCACACCCTGCAGAATGGCTACAGGGTGAGGGGTGGCTTT--CCTGGA--GAAAAGC---AGCCTAAAGGGACC----TGTGAAGGAACAGTCATAACTGATGCCCCAAGG-AAGAGAAGTCAACTGCTTTTTCAGTT-------ACTTAGTCCA-----GTCAAAcagaggttctcaaaatgggatctctggacctgcatcttcaatattacctgagacgttttcagaaatccaagtgtttgggcgccattccagacctaccctgcaaa s mm7.chr9 34025619 1752 - 123828236 TCCAGTCCAAGGGA-GCTGGGCATGAGGGTGTTCAGAGAGGTTTCTAGAAAGGACATGAGTCTCCAGGTAGTCCCCAGACACAACTCC---------GCAGGGGG-----GTACATACCTTGCATCCCACAGGTGCCTGAAGGCCTTGAGTCACCCTGCTGGGCCTGCTTCCTAGAGCCTTGGTGCTTGTATACCACATGGGGCTGGGCATGTCCAGGCTGAGCTGAAACTCCATCCAGAGGCTCAATGAAGTAGTCCTCATTGGAGAGCTGGAACACACCTCTCTGGGAAAAATTCACCAGGGTTACCGGTGGAGGGCTGGCACGTGCTTGCCTTTCC-ACCTACccctgccctgccctgccctgcccAGTTGAGCCCC----ACCTCCACAATCTG-GACCCACAATAGACAGATAGGGCAACTCCTTCCTTCTCGGCTGTTGCTAATTTT----------------------TTCCTTGCCATTCTACACA--GCCAAGGGCTTCAAAGCAAAGCTCCAGCCCTTACTAGTAGCCTCTTGAAACATCTCCAAGGATTTGGCCCAGCACACAC----CATTAGGAGGGAGAAAGAGATCTGCATTGGAATCTGAAAAGATGACATTTTACACAGTCCCAGACGGCCCTCCTGAATTGGGTGGCCCATATCCATGCCCCCAGGATGTTTTGCATCTCCTTTGAATGCCAATCTTCTCCAGCCACCATGCCCCCTCCCAGCTGGCCATTGCTTCTTGTCAACGTCTTCAGTCTCCCTGAGGCAATGAATCACTTCAAAAGCAGCT-CTGTCACACCCAAGCCACCCAGTTGCC-ATGACCACCAAGATATCCTGCTTCTCCAGTCCACAGCTGGCCAGAGAAGGGAAGCTGGCAGAAGCACTTTGGGCACATCTGCCTGGCATAGATAAT----------GGAAGGTCATGAGATGCATTCAGGAAATCCACCAGCTCCGTAGCAAGCTGGAGACTCCAATAGAGAAGACGGTGTCACCGTCTTTAGACTGCCCACTA---GCACTGATTAGACCCCTTGGGTCACACAAAGCTAAGAAACCCACAgta----ctgaaaactacacctgctttagggaatacagaaggggctttgaatcag-----cctccatccc-------------tgaatggt--ggtgaccttaggcaagtctgctg--gaaactgtttcctcatctatagaacaggaaGCTCTCCTC---TGCTCAGCTGCCATGCAGGCTCAATGAGAGGAAGTGCAC-CTAAGAAGCAGACACAGGCTCCTTAACCAG-AATAGATTACTGCACAGATTGGCCT-CTCAGGCCTACACACTGAGCAGCTCAGGGTGCAGGC-ACCTTGTTGCTGGTCTC----------------ACGGATTCCACCTGAGCCAT-TATGACGAGAATCCTTTGGAAGCAGCGGATGGCTGTGGCTGTGGCTGTGTAT-----CCCCATTCCTGCTATACACGC-------------------------TTGGGCACTTGACGGTG--CAGAAAGTAAATGAGTGCTACCTAAACTGTAGGC-ACTGTAGCC--------------------TTTGGGTAGTGGCATCCCACG---------AGCAATTAGAAAC-------------------TGTCTTAGAGG-------CTAGCAGAGGAAGGAAGAGAGGGGTTTCT---------------------------------GGTGTCTCTAGTCTGGACTGTAAGGCTAAAATACAAAGGGTTCAGTTTGCAGAAAATCACTCCTAACTGGCACCCCAGGGGAAAAGGAGCCAACGGCTTATTTAGCCTCTGCAAACTCTTTCCATGGGGGGGGGGGGGGGGTT--------GCGGTCTCTGGGGTAGCAGCTTCCTTCCTACCCAGGACATTTTCAGAACTTCAAGAATTGG------ATCCCAaaacaaacaaacaaa a score=23769 s hg17.chr15_random 463642 642 + 784346 GTCCTAGAGATGAAcgaggcctgcgttgtcactccca----ctttacaggcgtgaataccgaggctggcagagaaaaagtgcactgggcaaagccaccagacaagtgcgtggcaaggctagagccaatctccacatcccACCACCCGAGACTGCCCCAAGTATACATGTCCCAGCTCACTCACCAGGCCGTCGCAGGCGCTGATGGCCGCCAGGCCACCCTCGAGCTCGGAGTCCTGCACCTCGCCAAGCAGGTGGCAGGCGGGGGTGTGGGCCCGGATGTGCGCGCGACCCAGGGCGCCGCGCCGCGGCATCTCGCTCACAAAGCCGGGCGCCAGCAGGTGCTGATTGGCGGTCAGGTTGAAGCGCAGCTCGCGCCTGCGGTATTGCAGCGGGTAGAAGGCGGGCGCGTCTCGGCGCACAGATACATCCCGCTTGCGCAGTGCGCGGGGCCGCAGCTCACAGGACAGGAAGGACCCCCCAGCGTCCACGCGAACCTGGTGCACGATATCCGGTGCCGCCCGGCCCTCGGTTACACTTCCTGCAGGGAGGGAACCACAAAGGCCTTAGGCCCAGGGCAGAC-CGGGGTCCTTGCTGGTGGCCAGGGACCAGAGGGGag-cggccaagag-------------------------------------------------------------------------ggggctgctggagtcagag s mm7.chr9 34027527 686 - 123828236 GTCCTTCAGAACAAGGAAGTCTACACTGTCATTTCTGTCTCCTTTA------TGAACACAGAGG-TGACACAGGAAAGGTATACTGAGCAAAGCCATCAGACA-----------------GAGTCAATGTTGTTACACCA--ACCCCAGCCCTCCCCACGAGCA----TCCCAGAAAACTCACTAGGCCATCGCAGGCGCTAATGGCTGCAAAGCCTCCTTCCAGCTCCGGGTCCTGGACATCACCAAGCAAATGGCAGGTTGGGACACTGGTTTGGATGTGCGCATGGCCTAAAGTGCTGTGACGTCGAATCTCACTCACAAAGCCGGGAGCCATCAGATAAGGGTTGGTGGTCAAGTTGAAAAGCAGTTCCCGCCCTTGGTACTGCAGCTGGTAGAAAGCAGACGAAGCCTGCGTGGTGGACACATCGCGCTTGCGCAGCACCCGTGGCCACAGCTCATAGGACAGGAAGGAGCCTCCAGCATCCACTCGCACCGGGTGCACGATGTCCAAACCCGCCCGGCCCTCAGTCACAAGACCTGCAGAGAGAAAGTAACA-----TTCAGGTCCAAGGCAGACTCAGGGTTTTAGCCGATCACCAGAAACTAGAGAAGGGTCAGCTAAGAGATGGCAGGATACTTAGATGCAAATTCCTATCATGGCTAAGCATGGTGAAGAAAACTTGTAATCACAGCACTCAGGAGCTTTAGGAGACTGAG a score=4440 s hg17.chr15_random 464312 67 + 784346 tctactaactctgctatttcatctttccgtgcctcagtttctccatctggattgttgcagtaactcc s mm7.chr9 34028512 67 - 123828236 tttaccatctttgctgtctcatcattccatgcctcagtttctccatctgaactcctacagtaactcc a score=7160 s hg17.chr15_random 464749 313 + 784346 accccaggtgcccctcccctcatgttttcaatatagcagccagagtcattcaaaaccagcctgatcatggtccttctctgctcaaaatcctgcaatggtgcccatctcactc-gagcaaaagacaaagttc------tggcctgtatgagacgctaggcaaggtgacctgtccaatctcatttccagctacaccttcttagttccctccactccgcccactggcctccttgcagttcctccacaggccagacatgctgctgcttcaggattttgcattgctgttccctacacctgcaacactcttccctctgttttccac s mm7.chr9 34028605 288 - 123828236 acatcaggagtcctttatcaactcatttcaacatagcaaccagaaggagcca---------tgatcttaa-----ctgtgcctatgacactgcggctacccccatcccacttagagtgcagtgcaatattccatcagtggc--acatgaggccctaggcaaggaggtctctccaatctcatctccaac-------------ttccctctgctagacctcccagcct-cgagatgttactcagcaagccagatgtgtccccacctcagg-ttttgcattgttgttccctgtgtgtg-aacaacctaccctcTATCTTCCAC a score=9732 s hg17.chr15_random 465062 245 + 784346 gtggctaaaccac-----tcacttttgagttcttgctcaaatgtctccttctcaatgaggcctcctataatgactttattttaaaattgcaactccctggctctccgtatccctcttccttgctttatttttccccatagcacttctgacataccatatcacttagcattttcattattttttctatttatttgttttctccctcccctcccaatgtag--tctaggaaggcaaaaatctttatattctttg s mm7.chr9 34030057 238 - 123828236 ATAGCTCACGCATGATATcctccttaaagcccatgctcaaacatctc----tctgtgaggcctctcttggccattttattttaatagtatgactcactggctttccatgcccccctcccctgctttatttccccccatagcaat---gacacaccctgtcacttaacatttttgttatgtgtccc-----tttgtttcctccc--ccctcccaaagtcacttctaggaaggtaaaaatcttcatattgtttg a score=11224 s hg17.chr15_random 465785 555 + 784346 TTGA-AGATTTAAGTGTCAGAGGAAGTGTCCAGAACTTAGTCCTTTTTTGG----TATTTGTTGAATGACtctgtagaatgtggataaccacagcacttacactcttgatgctgctgtgaggattaaaccaggtgagctactccacatttagcagtgcctgaaccactggttgaatatgatggcaattatgattgttatgattattattAGCCTGATGGATTTAAAAATGTGCTCTCAGGTGCGTGAGCATTCTGCAAGTGTCTCCAGGCCTCCTGGAATGGGGAGACAGAGAAAGACCACCCCAGTGGGGCTGCCTGGCCCCTAACTGCC--ACTTCAACAGAGTGGCTCTGGTTTCTTTCTTTTACATGGAAGAATTCATTTAAAGAAAG-GTTCCAGGGATGGAAAAAATTGGCAGACCTCTGCTCAGGCCCTTGCAGTTTAAAAACCCCTCTCTGTTGCTCTGTC-CTCTAGGATTTCCCAATAAGG------------CCTGG-----ATTCTTATCCTTTTTTG----CCACAAactccttctcagaacaatattttgaaatgcagaaaataaaataca s mm7.chr9 34030295 541 - 123828236 ttgacggatttaagtgctagagg---cgtttagaacacagttgtctttcaggaaatgtttgttgaatgaatgTGTAGAATG-GAATAACAGCAGAACGTACATTTCAGGGGCTCTTCTGAGGGCTGATCACACTAAGCCAC-AGACACACAGCAGCGCCTGGCCCACTAGACTCAGCAGAC----------ATTATTGGGATTGTTACTAGCCTGGTGGG-------GTGTGTCCGCAGATGCCTGTGGGATATGCACATATCCATTGCCCTCCTGGGTTAGGGAGG------AGAACCATCTAGATGGGGCCCTCTGGTGTCTCTCTACCCTGTCTCAGTGGAGCACCTTTGACTTCTTTCTTT-----GAAAGAGTCCCTGTGAAGCAAGAGCTTATGAGCCAGAGAAAGCCTGAAGACCTCAGCTTAAGCCCTGAGGGGTTGGAAATCACTCTCT------CCATCACTCTTAGATTTTCCAGGAAGGAAAAACATTCTTCATGGTGTTTATTTGTCTCTTTGTTTGTTTTCCATGCATTGCTTTTTAGAAAACCATTTGTACATGCC-----TAAGATACA a score=1461 s hg17.chr15_random 466662 53 + 784346 aggagtaccaaggaa-------attgattatattgaaatacagttatcaaaataatttaa s mm7.chr9 34030836 60 - 123828236 AGGAAGACCAAAAATTATATATATCCACCATATGGAATTACAACTCTCAAAATAACCTTG a score=1778 s hg17.chr15_random 467055 60 + 784346 aaagtagggtgtggaattata-------------ctttaaacaagattttctggcaaattaaacaactatggt s mm7.chr9 34030896 73 - 123828236 AAGGTGGAGTGAAGAATTGTGTGGTCATAGAAGTCATTAAGCAAGCTCTAATGGCAACACTAGCAACTGTGGT a score=1404 s hg17.chr15_random 467415 87 + 784346 aactacggaaattttgaagtagtgatgaacgtaaaccttatttcaagatacatgcaacaactgtaatgagata-gaaaaatatttggt s mm7.chr9 34030969 73 - 123828236 AATT--------TTTGAAGTGCTGATGAGCA-AAAGCTCACTCCAAAGTATCTACATCAGC------GAGACAAGAAAACTACTTGCA a score=8279 s hg17.chr15_random 467533 417 + 784346 gttgggatttgctaataatattcataattgag------------------------------------------------ggaaatactaaatttcattgagaggttacaaaaagtaaatatgtaatattttcccattcaagctcatggatcccctcagttcacggt-cccttaggctgtggaccccaggttaggacacctgCAGTAGGGTGT-CCAGACTGCTTCCTAGGTGAGAgagcaaagggaggctcagagaggtggagagattggcctagagccacacagtgacagtgagagtggcagtgctgagactgggactcaagtcccccaaatggtttcagtctcttcagtaacattgctttatattctcaacagtccatcccttactgggcctcagtttccccatcgttaatgtgaaagagttgaattagatcacgtttctca--------------------------aatctc------------------------------------------------------------ttTGGCCACCAGGTCT s mm7.chr9 34031741 519 - 123828236 GTTGGGATTCACTGATAATGTTCCTAATTAAATATTCATACCTCATAAATTAAGTGTGTTAATCTTATCTATAATCAAAAAAAAATGCTAAATATCACTT-GAGGTTATAAAAGTTGTGGGTGTTATATTTTCCAATCCAGGTTCATTGCTTCCTGGAATTTGTGGTTCCCTCAGGCTGAAGACTCTAGGTTAGGGCACCAAGAATAAGGTATATCAGACTGCCTGCCAGGTAAGAGAGTAAATGAGGACTCCGAGAGGCAGAG----TAAGCTAAAGCCACACACTGAGAATGAGGG----AATG--AAGACCTGACCCT--GTTTCCCAAATGGCTTC----TCTTCAGTACTATCCATCTATACTCTCAGACAGCTGTCCTTT-------------CTCGCCATCGGTA---TGAAGAAATTTGACTAGA-CAGGTTTCCTAGAAGTCCATAGCTAGCCTTCAGAAGGAATCTCAgggatacggctccgacggcagagtgatggatagcatgcatacaagtgtgtgagcctgagtgtaatcaccagcttt a score=40357 s hg17.chr15_random 467950 1520 + 784346 AGTCTCAAAAG------------AAATCT-CATGTGCCGGGGGTGGGGGAGCCCTGGCATCCATGCTTTTCCCACTCTTTTCCCTCTCTGCAGTTCCCAGGCTCTAAAGAGCACAGTTAGGGAACTTGGCAATCTGGAGTTTCTCGATTGGGTTTATACCCAGCTCCCAGGATCCTGGCTGTTCACGACAATAGACTCCACGGGCTCACATGAATG------CCTGAGTGCCCTGCTGACATCCCACCAGGATTCCTTCTGCTGCTGCC---------------------CAGCCCAAAGCTCCATCCCAG--CAGGCTGCGGAAACCAAACCCGCCCTCCAGTCTGTCCCCTGCCAAACTGCATGTAGAGTGCCCTGCACACGTCAGTGCTGTGCCCCTGCTGAGAGCATCTCCCACTGCTCACAACTGCCCCAGCAGTGCCGGCCTCAAAGAGCTTTCTCTGAGAGTCAGGAGGTTGGATGGGCTGGGGCAACGTGCTATGTGGCTCTGAGCAAGTCTTCCTCATCACTGAGCCTCAACGGGCCACTAGTGCAAGGATTTTCCAGATCTCACAGAT--gagtttcttaaaaacaaattcccaggccccatcccagactcactataccagcatttccaggaaactaggactagggactaggaagctgtttt-----------------------taccaagaacctccgggagctgtgatcctcaggaaagttaggaaatcCCCCACTGGGAGTGaacctggctggtcatcagcagtacgtggagagctctgaaaaactgcagatgcccaggacccagcccagagattctagttccacagatccagggctctgggggccctagaatgtgtattttctgtgtttttctagaccttcccagggattctgatctagccagttcagaggctggcattcagaaaccaccggactggatgatttaaggtgacttcttgctctgacatcctaATAAGGACATATGGGACTACAACTCCTCAACCACAGCGTGCAGATTTGCTTGTGTTGATCAGTTATTGATTTTTtggtttgttttggctgacacaaatattgaaaaatgttttagtcaattgccaatgtttaggaatcacatgatct-------tgtaca-----aaaatctcaattttcagcttttcttgaaaagtcttatcatccatccatgtcaggcttaaattgctccctggcagaagtggctggggtggagcagtgagttccctttaggaagggcctatgctccccggt--cctcagtccccaccactccctattcattcccagcactgtggctg----caagtaggctccctttcc--catcatgcttgtgtttcctttcactcagtaaagaactgagtctctaacaaaagtgggaaaa-caagagatgggccaagaagccccatgtttcaggaaaaatCTGTCtccctacccacctcgtttgctcatttatgttac---ctgcctagtccatggcatttggtatgtgacccttgGCTACTAACTGTGAGGGGGCACTAGGTGCTCCAAAGTCCAGGACAGTGGATAAGACACCATCCTTGCCTTCAAATGGAGAAATg s mm7.chr9 34032378 1448 - 123828236 actctcaaaaaCTTTTTTTCTGCACACCTACCTACATTGGTGCTGGGAGCCCCCTGATCTTCCCTTGTCCCCTAGCCCTTTCCCTCTCCACAGTTCCTAGACTCCAG---GCACAGCCAGGAAACTTGCTGCTCTGA-----TTCACTGAGGTTTTT---CAGC---CAGATACCTG-----------------ACCCCTCAGGCCCAGAGAAATGTTCTGGCCCAAGTATCATGCAGACATAGCCTGAG----CTCTTTGCTGCCACCTGCCAAGTTGGGAGACTAAGTCTACCCAGAGGCTCAACTATGGCCATGTTACAGAG-TCAAGCCCTCCCTCCA-----CCTGCTGCCAAAACTCACACAGGGTGCCACTCACATGCCAATGGTGCGCCCCTACTCAAGACCTGGCCCTTTGCCCACGGCTGCCCTGAC--------------------CTCTCTGAGAGTCA--CAGACGAGCGAGCTGGGAAGAATCGCTGTGTGGCTCTTAGCAAGTCTTTCCAATCAATGAACTTCAGGGGGTGGGAAGTGCAAAGAGTTCCCAGACTTCCTGGACAAgaatttcttaaaaacaaattcccaggccccatcccagactcactgaatcagcatctcCACAAAG--------GAGGATGAAGAAGCttttttttttttttttttttttttttttATAGCAAAAGCCTCAGGGAACTG-GACTGTGGGGAAAGATA-GAAATCTCTCACTGGGAGTGAACTTGACTGACCTTCAGTGGTACCTACAGAGCTTTGAAAAGCTACAGGCACATAAGACCTAGCCAACAGACTGCTCTACTGTAGGTTTGGGGTTCTAGGGTCCCATGA---TGTATAGGCTGTGTAATCGT--ACCTTCCCAGGGGTTCTAACTGGGTCCTTTCAGTGGCTAGCAT--------------------------------GCTTGCTGCCCTGGCACCCTAATAAGAGTATTTGAGACTACTACCCCTTGACCATAGACTGCAGGCCTGTT------------CTATTTAT------------------TGGCACATATATTGGGAAAAA--TTAGTTAATTTCTAATGTCTAAAAATTATATGATCTTTACCCCTGCACACACACACAATTTCCATTCCAAGCCTTCCTTG--AAGTTTTGTTATCTACACACATCAGACCTAAATCCATACCTGTCAAAGGGGGCTGGAGAGAAGCAGTGAGT--CCTTTGAAA----CCTGTGCTCCCCATCTGTCTCTGTCCCCACTACTTACTACT-GTGGCAGACACTGAGGCTGAGTATAGACAGGTTGCCTGTTCAGTATCGTGCATGTATT---------TCAGTGAAGAACTTCATCTCTAACCAAGGTGGAAAAAGCAATAAACGGGCCAAG-AGCCCATTATCTCTAAACAAATCTGTCTTTCCACCAGCCTTGTTTGCTCATTTCTGTTATGAAATGCTGGGTTCACGACACCTGGCGTATG--CCCTGGATACTAACTGTTTGGAAGCATTTGGTGTTCCAAAGTCCAGGGAAATGCAAAAGACACTACCCTAACCCCATCAAAGAGAGAGG a score=3930 s hg17.chr15_random 469799 114 + 784346 AGACCCCCACTCTGGCACAGTGCTGACAAGGTCCAAGCAAGGGGAAGGGATGGCACCTTAT--------GAATGCGTTGGAATGAAGAAAAGTTTCATCAAGGAGGATGCATTTGAGATGTC s mm7.chr9 34033844 122 - 123828236 AGCCTCTCACCCTGGCACAGTATAGAGAAAGTCCAAGCAAAGGATGGAGACACTGCCTTGCTTAGACTGGAATGGACTGGGATGAGAGAGATCTTCATCAGAGACAGCCCATTGTAAACGTC a score=1335 s hg17.chr15_random 470795 138 + 784346 tataacaatatgtggtgagcttttaaacaatattttaaatatttctgattta-atttctagtgataaataccaatagatataccctacataaaccaaagctccttgggacctcaatgtatttttaagagtgtaaaggaa s mm7.chr9 68639813 101 - 123828236 tataaaaatgttt-------tttaaaaatatattttaaatacatagaattagtatatattgtaatacatataaatatattta-------------------------------agtatatatGTAAAAGTGCAGAAGCA a score=4923 s hg17.chr15_random 470983 132 + 784346 TTCTCTAGAATTTCTTCCTTGGAAGAAACA------------TCCCTTTGCCATTCTATATTAACTTACATAGTTCCACTGAGGCAAGTTTTGCTACCTCCCTCCCATCTTTCCACCTCTCTCTCAACACAAAACCTGACCAAA s mm7.chr9 68640111 126 - 123828236 TCCCCTAGCCTTTCCTCCTGGGAAAAAAAAAAAAAAACACCTCCTTTTCTCCATTCTCCATTAACCTACAT-GTTCCTTTGGGGCTGGTTTTGATACCTCCCTCCC-----------------TTGACACAAAACCTGACCAAA a score=3897 s hg17.chr15_random 471115 304 + 784346 GCATTCTACCAGCCCACCCCATTTCCAGTGATTAGCTGTCAGGTGGGCTAAGCCAAACAAATCTGGGTTTTCCCTGAGACTAGACCTCTCTTTCTGGGAGAGATGGAATC----ACAGGGACAAGGTTGGCCACCTTGGGGTAGTGAGAATTCATCCTGCCTAAACAGGGAGAATTCAAACAAGTTTCTAGAAAGCCAAACTACTTTCTAGAAAGTCAAAGATAATTATATTTTTTGCCATGACTGTAAGAATGCCCATTTCATTGCACACTTTCTAACATTTTTACCAATCTGATAAA--TAAAAGCTG s mm7.chr9 68640590 248 - 123828236 aCATTCTAAC---------CATTCCCAATAATGAGCTTTCAGGTGGGGGGAGCCA--CAAA-----GTCTTCTCTCTGACTG----TCCTGTTGTGGGACAGTTGGGGTCGGTCACAGGTA-AATTCTGGCTAGTGTGGAGTACTCAG----CGTTCTGC---------GAGAACGCA------------TGAGGTCA------------GAGGGCTATAGATAACTATACCTCCTGTC-TTACTGTGGTGAT-CTCACT-CAGTACCCA-GTGCTAACATTTTTACCCATCTGATAAAACTGGAAGCTG a score=5343 s hg17.chr15_random 471745 330 + 784346 AAGTTCCCATA-----CAATATAATTTCTTCCATCTCTGGAAACAAATTCAGCAATGAGAACTGAAAGTCACCACGTGGAAGGTTTCAAGG--ATTTAC--------------GTCTACCTACTGATGTCTAAAGCATTAGTTAAGTTACAAAAAAATacgcacacacgcgcacgcacacacacacatacCCGTATGtattcagtaccagaaaacatgactgactacatggtaaagtcatccaacagaa-agcacacaataactgaaggcaatgtagaggagtaagttataacatggatctacaatactgttgagtgaaaaagcagattacaaacaaatatc-----tgatttttaa s mm7.chr9 68640844 309 - 123828236 AAGTTTCTATATAGTACAATATAATTTGTTCTACCTTCAGAAACCAAATCTGCAACAAGAATTAAAAGCAACCTATAGGAAAACTTCACGGGCATTTCCTATGTGCACTAGGATTCCATCTACTGATGCTCAGAGTGCTACTTAAAATAGGAAAACAGATGCA-------------------ACAGCCACCTGCATG--GCCAATATTAGGAGACAGAACTCGCTAGATGGATTTATCGTATCATAGAAGAGCAAACAACGA--------------------------AAGATACAGAGTCACAACACTGTTAAGTG-AGAAGAATATGACAAAACAATCCCATTTATCATTTTTCA a score=7075 s hg17.chr15_random 472075 234 + 784346 gggagaggaaacatatacaagcacaggagaaaagaggtgagcagatgactggaaagatac-------aaatttctgacagtggcaccttctgagtggtagaattacataggtaatattttctagttttgcctaaaagttttctaaatttcttaaaataagaaggttttgttttccatattacaaaaTA---TCCATCACCCCA--GGAAATTTAACCTTTGGCACAAACTCTACAACATGTTCAAA s mm7.chr9 68641301 219 - 123828236 AGGGGGGGAACCGCATA-AAACAGAGGGGAATA-----------ATGACTAGAAAGATACTAATCCAAAATTTATAGCAG----------TGAGTAGTATAATTAGAGAGGTTGTGTTGTTTTGTTTTGCTTCTCTGGTTTCTAAATTTTTCGCAAC---AATGTTTTGTTTTCAATATTACAAAATACATTCCACCACACTACTGGAAA--AAACTTTCAACACAAACTCTGCATCATATTCGAA a score=6302 s hg17.chr15_random 473686 260 + 784346 AAAATGCTTACGTATTCAA---AGACAGCAA-TTGTAGCTACTGAGAACATCATTGTAAG-CAAACTGAGGCAGAGAAAACAAACGTGCTGATGAGGATTTGAAACACCTAAGCTGCAGAAACCCACTGGATGGTTTCCTAGGTTCCGAGTTGGCATTATCTTTCAGAACGATCTTCTAGAAGAGATCACATAACACTGTTACAAAGGATCTGGAGAAAGGGACCCTGGCTTCATCACTCTGGCTCTCCAGTCATGCTTTACATT s mm7.chr9 68641520 253 - 123828236 AAGTTGCTTAACTAGCTAAGGTAGAGAACAAATTACATATACTCAGAATATTTTTCTAAAATGAACTAAGGCAGATAAAATAA------TGAAATTGATCTGAATCAACTAGGCTGCAAATTCCC-CTGGATGATTTCTGTAGCTCTGATTAGCCATTGTTTTTCATAATTATCTT-TAGAAGCTATTAGAGACCACTATTACAAAAGCCTTGGGGTAGGGG---CAAGCCTTGTTG-TGTTTCTCTCCTGTAATGTTTTATAGT a score=9835 s hg17.chr15_random 473946 525 + 784346 TTCACTTCTTACACTCTCTTTCATA-GGAAGTCAATTTACAGGCTTCCACCAAGCCCTTAAGTGACGTTTTTGTACTATCCATGACAAGTTCTTGATGTTATGTCTGCACTTCTGACAAATTCTTAGCAGTTAACTTACTAGGCAGTTAAGGTTTTTGTTCAAGCACAATATAGCTAGAATAG-GGTCATACATTCAATAAAACAAATATTTACCAAGCATTTATTGAGTGGAAGATAAAAAGCACAAAGC-ATAATTATAAAACATTCTCCCCTGCCACCATAAAAATTTTTTTAAAGCCTTA-CAGAAT-----------ATAGCATAACATAACCAAAGCAAAAAT----AGGACTAAAGAGGGGAGGAAGGGGAAATATCAGCATGAATTAAATATGACCCAGAAGAGCCTTGATGGTCAGACACGTAAAGACAAATTGGGTAGGGTTAGGG----GGTGGCTGTCAGGGGCACATTCTACAGGGGAAAAACAGCTGATACAGAAGCCTGAAAGGAAAACCGGGCAGAGCACCTGGACAGGACT s mm7.chr9 68644462 490 - 123828236 TTTAATTCTGACACTGGTCTTCCTACAGATGTC--CTATCAAATCTACAATGACCTTTTAAGTA---TCTCTTTACTGCCCATGATA-----------------CTG----TCTGAGAAATTCTTACCAGCTATCTTTCAAGGCAGG-AAAACTTCCCTTCAA-----ATATAACTACAACAGTGGCCATATAGTCAATAGAACAAGTATGAACTGAA------------AGAAAATATAAGGCACaaatttataattatataatattCT-----GCCACTATTACAACTTGGAGAAAAGATAATCAGAATTATGAGTAAACATGGAAGAAAAAAA--AAAGCAGAAATCACAAGAACTAAAA---GGAAAAAGGGGAAATGTTATTATGAACTGCGCGTGACACAGAA-AGTCTTAAAAGGCAATCAACCATAGAAAAGGCAGGCTGGGACAGGGCAGAGGCGAGAGGCAGGAGCTCGTCCCACTGAGGAAGAACAGCTGATATAGAAGGTTAGGAAGAAAG-TGAGCAGTGTCCTCAG--AGGACT a score=4030 s hg17.chr15_random 474474 204 + 784346 ACCTGCTGCATCCAGGGTACAATGCGCCTTTCCAGAACACAGCAGCG--------ACCCGGGGTAGAGGGATCGCTCAAA--CAGCACCAGAGGCTGCATTCCAACTTTTCCTCCATCAACGAGTCCGTTTTCATTGTTAGTTTCTCCTT--------AAACACGA-------TTGGCTGAACATGCGGGAACAAGGA-----AAACCTGACTGAAGAACGAGGCATTTAAGCT s mm7.chr9 68647529 227 - 123828236 ACCTGCCGCGTGGAAGGTTCCATGAGCTTTTCCAAAACACGTAAGCGCAAAGCCAGGTCAGGGCTAAACGATGGTTCCACACCATCCCCCGGGGTTGCGTCCTAAACTTTT-TCCTTAAATACGTAGGCTTTCAGTGTTCGTTTGTCCTCGGAGACCAAAACACAAACGAGAACTGGTTGAACAAGCAAGGACGTGGGTTTTGGAACCCGATGGGAAAACGAGT------AGCT a score=27539 s hg17.chr15_random 475142 907 + 784346 AAAACCGAAAATCTTAAAGGCCTTTCCCCTTCCCTCACTGGGCTCAAACAACAGCGGGAGCCGCCCTGCCACGCCC-CGTCGCGGTCCAGGGGAGCAGGCTAGCTGACTGAGGGCGATCATGGGCCCCAACAGGTCTGCGGGCGACGCGGGCTCCCACCTCAGGGCGCAGCGACTGGGGCGAGAGGTGCCGGCAGCCCCCAAGCCAGCCCCGCGGCAAGGAGCCAGAGAGACGCGCCCTCCCCCTCCTCCCACGCAAGC--CTCACACAGCGGGGCGGGCCAGACGCGGGAGAAAGGGGCGCGCTCGCCCCGCCTGGGGAACCGGGGCCTCTCCCGGGCAGGCTCCCCTTTGTCCCGGGACTCTGGGCGCCTCCTCTCCGCCCTCGCCCTGGCCCGTGAGGCCGCCACTGGGCGCCTCACCGTGATGTTGCAGTGGAGCGTGAGCTGTGGCGGGGGC------------------------------------------------------------------------------------------TCCTGGTTCTTGTGGAAGATAGAGGCCAACAACCTCAGCTTGGCCTTGAACCCTCACACGGACATTTTACTCTCACCTCTGGCGGGAGGGGCGCGGAAGGTGAGCC--CGTCGGGAGCCGCTGTCACGGCCGCAACCA-CCCGCGGGACC--TCTCGGCGGCGCTCTCCCAGCTCCGCCTCTCCCTGCTGCCTCAACTCTATTCGGAGTAGGGCTGGAAAATGGCAAGGGGCACCGAGGCCTCTGCGGG---------GAGC---------------TGTGTGGCGGCCTGGGCGGCTGCTCCCCTTGTAACAGACTCCACCGACAGGAGGCGCTGCTCCTGTCAAGCCGCAGCTTAAAAGGGCAACAGCACCACAGTCCCCGCTACCGCCTGGGAAAGGGCTGCCCCTACCCCGCTCCCGTCCCTCTCGCCCCTCACA----CCCGTCGCCCCTCACCCCTCAACCCGCGCGCCCCCTGCGCACC s mm7.chr9 68647756 946 - 123828236 AAAACAGATA--CTTGAGAGCCTTTCCACCTGAGCGACTGA-------------CAGGAGCC-------CACGGACGAGCCGCGGTCCCCAG-AGCAGGCCGGCTGC----GGGCGGCCATGG-------------------------------CGACCTCGGGGCCCGACGG--GGGCCGCGAGGGGCCAACAGAGCA-AAGCCGGCCC-GCGCCGTGCTGC------GACGCGCC-TCCACCTCCTCCCGACCAGGCAGCCCGAGCTCCCGGCCGGGCC-----CAGGGCCCAGCCGCCAACCGGCCGTGCCCGGGACACCGGGGG-TCTCCCGGGCAGGCGCCC-TTTGTCCCGGGACTGCGG-CGCC-CAGGTCCGCCCCCGCCCGGCCCCGAGGGGCTACGACCCGGCGCCTCACCGTGATGTTGCAGTGAAGTGTGAgcggcggcggcggcgaaagcgagctgcccggcggtggtggcggcggcggcACCAGGAACTGGCAGTGCAGCTCGTCCAGCTTCCAGCTGACGATGCGGAATCGCTCGTGGTTCTTGTCGAAGATGGACGCCAGGAACTTCAGCTCGGCCTTGAGCCCTGACACGGACATCTTCCCCTCATCTCCAGCGGGAGGGGTGAGGAAAGGGAgccggggccgggagccgccgtcacggccgcgaccgccccgcggggccggcccgggccgcgcTCTCGCGGCTCCGCCTCTCCCCGCCGCCGCGACCCGCGTCCGAGCGCGGCTGGAAAATGGCGAGGAGCG-CGAGGCCTCGgcgggcgggcgtgcgagcgagggagcgagcgagcgtgcgGGAGCCGGGCCGGCTGCTGCCTTTGTAACCGACTCCACCCGCAGGAGGCGGTGGCC--------CCGCGGCTTAAAAGGGCAACAGCGACGCCGCCCCCACCGCCGCCTGGGAGAGGGctgcccccgccccggcgcgcgcccgcgagctccgcgcgcgctcccgaccgccccctcctctcatgacccagcccctttccgcccc a score=17013 s hg17.chr15_random 476243 900 + 784346 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCTCCCAAGGGAACAGCACTGCTGAGTTCAGGC----TATCAGCTCATGGACTGTCAGCAAAATACAGTCACAAGAAGGCTATGTGCTGTTTTGTCTCTTGCAGTGACGTCATGTTGCTCATGTTTTATGTTTTTCAGAGTTCATTAGT------TTCTGTTTGCTCTCAGTTAATATCCAGCTCAATAGATTGTGTAAGTAGAATACCCCCAAACTGAAAGTCACCTACATAAAATATAGTGAAAAATATGTCACCCACTTAAACTATAGTTGAAAATATGTACTCATTAGTTTTGTGTAGCCAACACTGG-----ataatgggtaaggggaaaggatcccagggctagactgcctgggttcaagttccgattt----cctgctggctgtgaaatacttgacagcgttcagcctctgtttcttTTCTTTTTTTTTTTTTTTTTTAGCTTAATCCCAAATATGATAGTAAGTCTCAGTTTCTTGATCTGAAAAACAGAAATTATTCAAT--GACAGTCTATGTGAAAACTTTAAAGTTTTCAAAGCCACTATCTAGCTTAGGAAAGTCCTCAGCTTTAGGGGTTAAAGTTTTTAAAACCACTGCCTGGTTCAGGAAAGCCCTCAGCTGTAGCCATTATTAGCTATGATTATTATTGTGGTGGCTACACATACATTAATGAGGCAGGAAAATGCTCAAGGATAACAAGCAAGTATCCAGATTATCTCATCAGACCAAGACAGATGCATATGCATGCATGATCATGTTTTAGCTCAGAGCCATTTGTCTAAAAGGCTCTTGAACTCAGAGGCCCAGGAGTATCAACTTTGCTTTGCAGTGGAGCCATCGCTTTTGTTAATCAATGAAATTGACATAATGCTCTTCT s mm7.chr9 55159929 697 + 123828236 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCCCAATGAACAGGCACTGCTGGCTACAGGCAGATTATTAGCTCACAATCTGCTGGCAAAAGATGTTCACGAGAAAGCCACATGCTGCCTCATCTCTgg-agtgacatcgtgtggcttctgttgta-------caaagatcattAGGGTTTTGTTCTTGTTGTTCTCAATCTAATCTAATTTCAATGGATTGTATAAGTAGAATTCTTCCAAACTCACAGTCACCTAC-----------------------------TTTAGAC-ATAGTTGAAAACACACACCC--CAATTTTGTATAGCTGACTCTAGATTCTATAATGACCAAGGGCATAGGAT----------------CTGGGCTCAGATACGGGCTCAGCACACACAGGCTGTAAAATACACAACAGCT----------------------------------------------------TATG-------GTCTTAGTTGCTTAGTGTG--TAGCAGGGATTATTAACTGAGACAG---GTGTGAAAA----------------------------------------ATCAGC-----------------------ACACTCCCTGGTTCA-GAAAGCCACAAGC-----------------ATGATCACTACCATTCTGACAACACATACATTAGTGAGACAGAAAAGTACTC----ATAACCA-CAG-----CTGAATGTGTGTTCACGGTAGG--AGGAGCATACATCTACATGCTCTTGCCTTAGCTCAAAGCCCTGTTCTAGCAAGGCTCTTGAACTCAG-TGCTCAG----------TTTGCATTACAGCACAGCTGTCACATGGCCTGATAAATAAAGTTGACATAACACCCTGCt a score=1854 s hg17.chr15_random 477143 68 + 784346 TTTTTT----TTTCCTTTTTAGCACCAACCATGTGCCTAGAGCTAAGTGTGTTAAGAAGAGCATGCTTCAAG s mm7.chr9 55160908 62 + 123828236 GCTTTCTATGTATCAGTTTCAGCAGTAACCATGTGTCAGG----------GTCAAGAAAAGCGTGCTTCAAg a score=108700 s hg17.chr15_random 478102 3472 + 784346 AGCCGGACATTAGTGAGCAAGCCCTGTC---TCCGTGAGCAGCATGGGTGGTCCTCTGAGCACGCCAGGCACGAGTGTGCAGGGAGCTGGTGCAAATGCCT-CTGTGTGCGGGTGAGCATCTGTGTTGTGACTCTGCCCACGCATGTGCTTCAGTGTGCCGAGTGGCTGCACGCCCCAGATCCATGTGGCACG---TGCCGGCCGGTGAGGGTGCTGGGCATTGGGAGGTGGCGGGGAGGGCGACGTATGCGTGTTGTTTGTGGGCATGTGTGTTAGCGTGTGCATGT-GGGCCGTGGGGCCTCACAGCATGTGTGTGCACACTCCGGCATGTGCGTGTGTGTGTCCCCCACCCCCAGGCCTGCCCCACCCATGCAT--GTGACCTGCCATGT-GATTTGAAGCTGTCTTTCAGAATCACTATCAGTGGCCCCTGAGGAGCGTCAGCCATGGTAGGTACATGCCTCACTGCCTGCTGCATGAATGGTCTGCCTGCCCC---------GCTGCCCCAGCTCCACACAGGGGGCATACCTGGAGCCTCAGAGCCAGGCTCCCTGCCCCTCCCTTCTGGAGCTGCAGACTTGCTCTTTCCTCTTTCTGTCCTTGTGCTGCTGGCTGTCTCACTTTGCTC-CCTGTGAGCCACGGGACTCACTGCCACTGCTCAAGGTCTCCATGGCTGAGCCTGGGGGCTCTTACAACAGGCTCCATGCCCAAGGTGGCAGATGTGGAACCATCAGAGAGGGCACAGAGCTCATGGTTTATGGTGTAGGGGCTGGGAGCTTGGAGGGGGTTGTGTGGGGGGCTGGACTCAGGCGGCCAGAGGCCTGGGCACATCATCCTGGGCACGCCGTACCTGTCATGCAGTCTGAGTCATGCTGCCAGGGCAGGTA--TCCAGCTCCCAGCCTGGGAGTGCCAAGAGCCAAATCCACTGCAGATTAGGGGTGATAGTCACGGTCCCACGTCCTCTATCTGTCAGCAATCCAGTGGTGATCTAGGATAAAAGCCTGAGAGTCCTATACACGCGGTCATCCCACAACACACTTCATAGGCCATGGAAGGACACACAGCCCCCTTCCCTCCCTCCCAGGTACCATGATAGCTGCTAGCGTGCGACTGAAGGCAGGGTCCCTGGCCCCTGCTGAAGCACTACTGCTGGCCAGCAGGCTCACGCACCTTGGCCTGTTGCTTCTAGGGGTCGCCTGTGCTATTCAGCCAATAGTG---------CTGCTGGC---------CCAGCTGAGCTCCACCTAG--------AGAGCTCACTTCCCTT-------------TCCTGCCGCGGAGTCTCCCTCTTCTGCTTTTCCC-AGCAGGAAGGGCCCAGCCTCACCTATGTAACCTGCAGCCCCCCGCCAACCAGTTGAGGCTGCCCTGTTAGACTTAGAAGTCTATGGCCAATGGCATCTGGCTACCTGCCCTCCCTGCCTTCCCCAGGGTCCCTCAGAGGACCCTGGGCTTTCTGATGGCCCAGAGGGGCCTCTGGCATTCACTCCAGCCAGCCATCCCTTATAGCTCCACCATTTTGGTTCAATCAGTGTTCCTTCTCTATCAGGTCTGGTGGCTGTTGGATGGGGCTCTCCAAG-CAAGAGGTGGCCCTGGGCC-GTGAGTTGGAAGACAGGGTGACCAGAGAAGAGAGAAGCCCGAGGGGGCTGAGCATTCATCTGAACTATGGGTGGACTGCCTGGGTGCCATGAAAGAGGCCAGCGTGTGTGGGGTGGGGAGGGCCGCCGCAGTCCCCAGGCACTACCTATGAAGCTCCGGCTTCTCCCTCCATCTTCCTCCCCTTTCCCTTCCAGCCCCTCTTTTCCAGGAACCTTGCC-ATGCCCACACCTACGCCCTCCCCTCCCCGGCCCTCCACAGCTGCTGCAGCGCACCCATACTCTGCACTTGCCTCACCAGCTCT---GGCTTTTCTCTAACCCGTTTTCTCTCTGCTTTCTCTCCAACTGCCAGCTGATTGGGTCAGGCAAGTCCATCCCATCCGGGGAGCCCCAGGCCCCACTTCGACCTCTAAACAGATTCCTCCT-CTTCTCAGAGACCTCCCTTTCCAAGCCTGCCTGGGTGGGTGTCCTGTGACTTGACAGTGGCTCCCCCAGCCCCAAAGCCAGCCC---CCTTCTTCTGTGACTTAGTCTGTTGTAGTGGTGAGCTGACACGTCCAGGTTTGACCGTTGCTGAAACTTGTGCCCCCTCTGTGGTA-TGCCCCTGCCCTGTTCTATAAATAGCTATAAATTCTCTCTcacacacacacacacacacacacacatatatacaTATATATACGTGGCCAACTGCCTCGCCTCTAGCACTGGGAATCAGTCCCCGTGCTGTGCTTGTGGAGTCTTGTAGCCCAGCAAGAGGAAGCTGTC-TCCTGACATCGCCCCTCCAAAGTGCACCACCTCCAGTGAGCTTCCGGGACATGCGCGGCCTGTGGACAGCCAGCCCCC--GCCATCCCTCCCGCCCTTCTGGCCAAGCATGGCGGTGCTGT-GCAG--GCAGCTGTGTGGCCTGACAGTCTCTACCAGTCCTGCTGTCCCTTGGCTGAG----AAACCCATTTCTGGATGACAGAGAAT---GTGT-CCTCTGCTGGCTGTGTTCTCTATGGAGCTCAGGGGAGGGAAAAGGCCAAGCCATTTTTAGGGTGCTG-TTGGGAGCAGTGAAAAGGTCACACCCTTTTCAAGGGACACTTTTCCTGGAAAGTCCCTGGAGCTTAGCTGGCTCTTACCCTGTGAAGCCGGCTCTGGCCACTAGGGGACAGGGCCCTGAACTCAGCCTGGAGGGAACCTGCGGGGCAGCCGGCACTCTGGAGGGACAGACAGGCCACCCGGTGCAGACAGGAGAGGGAGGCAGGGGGACAGAACGGAAGACACCTGGGGTGGATGGAAGTCAGTGCCCTTGGGCACTGGTATCT--GTCTTCCCTGCCACAGCTAGA--TCAGGCT------TCTCAACCAGTTGG------CTGTCAGGGCCAGAGTGTACTCCGTAGGCGCCATGGCAGTCCCCATGAAATCCACCAGGTGTCACCAGGCAGCATACAGGTAACAGG-----------CCTGGAAGGT---------------CCCCA-ACAGCCCAGCTGGACATGCTGAGACACTCTGGG--------GCTCCTCATTCAG--------TGGGACAAACTGCAGGACCCAGTGAGGGAAATGG-GAACATACCAGGCCGAGCAGTATGGCTAAATCCATTTA-TTCCAAAATCAAAAGCAAAAAAAAAAAAAAAAACAGGAGTCCCATCACCAGGGAGCCATGACCCCATCCCCGCCTCCTTCC--TCGCTCCTATGCTAGCAATAAATAAGTTTCCCAGTCGCGAATAATTATAAGAACCTCTTCCTCATATGCCAGCTGCAACCTCCGCTA-GGTACG---------------------ATACAGAATGTTACACAGCTACAGTATGTACACGGGGGAAGGGG--GGCCAC----CCCCAGCAGCCTGTGCCCTGGCCTGGTCTACAGTTAACTCCACTGT----------------------CCCGCCTCAGCTGCCTCTCTGAGT-----AAGAAGATGGGAGCCCCCCTGAGGGAAAAGTTGCTTTGGTGAG s mm7.chr2 150230066 3371 - 182548267 aGCTGGATCCTAAAGTGCAAGCCCTGTCCTTTACG-GAGCCCTATGG-TAACCCTGTCAGCACACCAGGCCTGGATGTGCAGGGAGCTGGTGCAAAGGCCTTCTCTGTGCAGGCGAGCTTCTGTGTTGTGACA--GCTCATGCGTGTGCTTCTGTGTGCTGAGTGGCTGCATGTCCCAGATCCGTGCTGCACGACGTATTGGCCGGCAATGGTGCTGGGCACTGGGAGGTGG----GAGGGAGATATATGCGTGTT---TGTGGGCATGTGTGTTAACGTGTGCACGCAGGGCCTTAAGGCCTCACAGCATGTGTGTGCACGCCCAGGCGTGTGCGTGTGTGTGTCCCCTAACCCCCAGCCTGGCCCACCTGTGTGTTTGTGAACTGCCCTGTTGATTTCGTGCTGTCTTTCAGAATCACTATCAGTGACCCCTGAGGAGTGTCAGCTACGGTAGGT-TATGC-TCTCAGCCTGCTGCATGAACAGTGTGTCTACCCCTCCCTCCTCGCTGCACCAGCTCCATGCTGAGGACA--CCTGGGACCCCTGAGCCAGGCCCCT--CCTCCTTCTCCTGCAGCTCTGGACTC-------CCTCTTCCTGTCCTCTTCCAGCTGGCTCTCTCACTTCCCTTTCCAGTGAGCCTCGGGACTCAGCGCCACTACTCAAGGCCTTC-TTGCTTAAACTGAGGGCTCTTGGAACAGGTTTCATGTCCAAGACGGTAGATGTGGGTGCTCCCTGGAGACACCAGA--CCACTGTTGACAGTGTAGGGACTAAGAACTAGGAGAGGGTGTCTTCAGCCTCTGAA-----GGGGCCAGAAGCGTTAGGACCCCCTCTT--------CATACCT-------ACTCTGAACTATGCTGCCAAGATAAGAGCTTTCTCCTTCCAGCCTAGGAGCATGGCGA-CTAAATTCACCACAGGGCAAGCATGAGAATCGCGCTGGCAAAGCCAGGCTCTGAC----------TGGTGACTTTAGACAA---CTTAAGAGCCTTTGCCTTTCTGCCAGCGCCTGAGGG--CTCGCAGGCAAGGTGAGGAT--------CTCATTCATCCTTGACA-------------TTGCACACCTGTAGCTAACAGCCACCTCGTCAGCCCCCGACATAGA------GCCAGCCCATCAGCTCCAACAT-TTGACCTGTT----TTCAGAGTGACCTGTGCCTTTTAGCCGAAGGCAATGCATTGTCTACTGACTGGGAAAGTCAACTTGAGTTCTGCCTGGCTGGCCACAGATCTCGGTTACCCTGTCCCAACTCTTCCCCAGCCATTGACGCTCACCCTTCTGCTTTTCCCCAGCAGGAAGGGCCCAGCCTCACCTACGAGACCTGCAGCCCCCCG---ACCAACGGAGGCTCCCCTCTTAGACTTATAAGTCTGTGGCCGCAGGCATC-GGCTGCCTGCC-TCCCAGCCTCCCCAGGGTCCCCTCAGAGGACTCCTGACTTTCTGACCACCT-GAGGGGCCTCCAGCGCTCCCTCCAGCCA----TCCCCTTTAGCTTCAATCTCCTGGTTCAAGCA------CTTCT------GGCCTCATGGCTGTTACATGGGACTCCCTGAGGCTTGGGGTGGCCCTGAGCCAGTGAGATGAGAGACAG--TGAGCAAAAATGAGGGAGGCCCTGTGGTGC--------------------------ATTGCCTGGGTGGTGTGTGAGAGGCC-GTGTGTGTGGCA-AGAGAGGGCCACCAGCCTCTACTCAGACTACCTGCTA-GTTACGGCCCAGCACCCCATCTTCCCTTTCATTCATCAACTGTGCATCTCTTCCGGGAACCCTGCCCACATCCACACCTGCCTCAGCCCCTGCCT------------CTGCTGGAGGTGGC--------TGCTCTTGCCTTACCAGCTCTCCTTCCTTTTCTCTCTTCCGTTCTCTCTCGGCTTTCTCTCCAACTGCCAGCCGATCGGGTCAGGCAAGTCCGTCCCGTCCTGAGAGCCCCAGGCCCCCCTTCGACCTCTAACCAGATCCCTCCTACTCCTCGGAGACCTCCCTTACCAAGCCTGCCTGGACAGCTGTTCTGTGACTTGACAGTGGCTCCCCCGGCCCCAAAGC--GTCCTATTCATCATCTGTGACTTAGTCTGTTGTAGTGGTGAGCTGACACATCCAGATGTGATGTTGGTGAAAACTTGTG-CCCCTCTGTGGTATTGCTCCTGCGACATTCtataaatatctataaat----------------atacctatatatacatatatatacatatatatGGCTGAC--ACAGCCTCGCCTGTAGTG-TCAGAATCAACCACCATGCTGTCCTTGTGGAGTCTTGTGGTCCAACAAGGGAACGCTGTCATCCTGACAAC-CCCCCCTCCAGTGTACCACCTCCAGTGAGCCCCCCTGTCCT-CCTGGCCTGTGAACAGCCATCCCCTTGGCCATC---CCAACCCTGC------AGCAAGGGGATGCTGCAGCAGCAGCAGCTGTGCAGTTCTCTGGTAGCCACCAGTCTTGCTGTCTCTTGGCTGAGAATAAAACCCATTTCTGGATCATGGGGAATTGCGTGTACCTCTGCTGGTT-TGTATTCTCTGGGGCTGAGAGGACGGTGTAAACT------------GGGCACTGAATGGAGGGTGAGGAAAGG------CCCTTGCTAGGG-TGCTTGT---------------GAGTTTAGCAGGTCCTCATCCTACGAATCCTGCTTACACCACTAGGGGGCAGTATCATGAGCTCAGCCAGGATG----CTGTG--------AACAGCCTAAAGAACAAAACAGGTC-TCTAGTGTGGACAGACTAAGGGG---AAGGGTCGGAATGTAAGAGGCCTG----GCCTGGAAGTCAGCGCCCTTAGTTGCTGCACCCCGAGTCCCACCTATGTATACTATATGTCAGGCTTGACTCTCTTACTCAGTAAGGAAGCTCTGT---------------CCCTGTA-GCCCCATGGTACTCCCCCTGGGGTCC-CTAGGCTTCAATAGGCAGTGTATAGGTGATAGGTGTCAATCAGCCCTGCCAGGCACTTCAGACCTTGGGCTCCATACAGGCCAG--AAGCCTGCT----CTCTCCAGGCAGGACACATTCCCTGCTCAGTGCCAGCCTGAGGCTAACCCCAGAACC----------AATGACGAACACCCTAGGCCCAGCAGTATGGCTAAATCCATTTATTTCCCAAGTAAAAAGCAAAATAAAG---------AGGAGCTGCATCAGCAGGT-GCCACAACCTTGTCTCCGCCTCCTGCCCTCTGACCTAACACTACCAATAAATAAGGTTCCCAGCCCAAAGTGATTATTAGAAGCTCTTCC-CATTTGCCAGCTCCAACCTCCACTATGATACAGGGGTGTCCCTACCCCGGTATATACAAAATAGTACACAGGTACAATATGTACACCGGGGGAGGGGAAGGCCACCCTGCCCCAGCAGCCTCTGTCCT-GCTTGGCGT--AGTTACCCCAATTGTCATAAGGCCTGAGAGAATGGTACCCACTTTCCCTG--TCCCAAAGTGCCTCAAAAAGATGGAAGCCCTCCAAAGTGGGA---TGCCTTCCTGAG a score=26128 s hg17.chr15_random 482029 630 + 784346 AGTTTGTGTTCTTTTAATAAACACACTTACATGGTTA-----CAATTTTGTAAGAATAAAAACCGATTATCTCATGCCAAGCATGCCCAGCATTTGCACAGTCTCAATACCTTTAATACTATAGTTTTCAAGACACACAAAAT-----TTTTAGGCAAA-ACAGCACCTTGAAACAATCTAATAATTTATTACATTACAGTAGCATCACAGAAGCAGTCAATAATGCCACTTTAGACAAAAA---TCAGTATTTCCATCATGCATTCTGTGTATAAGAATTCATAAATCGGTAAAAGTCGTTCTAAGAAAACTTGGCAAATACAGCTTTGGACTGGAATTGGCATTTCTTTCTCTACTTTTCCTTC---CCCTAGATTCTTTGTTTTAAGCTACAGTAT----TCGtattttaaaatgttttaaattattttaaGACATTAATTTAACAGTTACATTTTTGAATAGTTATTTGAAAGTGACTGTAAGATAAAGTTTTAGAGAATCTATTTTGGATAGGGTTGATTTACA-TTTTCACATTTTCTAAAA-ATCAGCTTTGGTTTTAGAACTGATTGTTTTTCATTTCAGGAAAACCTATCAGGTTTAATCTATTACTTTAAAAATAATTATCATATATTGCAGTCTTTAAATAG s mm7.chr12 113202207 609 - 117814103 AGTTTGTGTTCTTTTAATAAACACACTTGCATAGTTATATTACAATTGTGTAAAAATAAAAACAGATTATTTCATGCCAAGCGTGCCCAGCATTTGCACAATCTCAATACCTTTAATACTATAGTTTTCAAGACACACAAAATAAAAATTTAAGGCAAATACATCACTTTGCAACAAGTTAATAGTTTATTAcatcacagcagcatcacagcagcatcTAATAATGCCA-TTCAGGCACAGGGTCTCAGTA-TTCTGTTACGTATT-----TACAAGAACTCATAACTTGGTAAATTTCA-TCTAAGAAAACTTGGCAAATAAAGCTTTGGACTGGACCTGCCATTTCTTTCTCTGCCTTTTCTCTCAGCCCTAATCATTTTCTTTTGAACTCTAGTATCGCGTTGTATTTTAAAAC------AATTACTGT----------TTTAAGTATTACA-----------TTATTTCAAAATTTCTCAAAGAATCAG----AGAAAGTATATGATCAATAAGGTTAACTTTTAGGTTTTAAATTTTCTAAAATAACAGCTTTGGCTATA-----GCCTTTTCTTCACTGCTGGAACACCCATCAAGTTCAAGTGCATGCTTTAGAAATGCCTGTCACACAGTGTGCTCTTAAACTGG a score=25900 s hg17.chr15_random 482766 1557 + 784346 CAGAAAGAGGACAACCCAAGCCTCATTTCAGAGCAAAGTCTGGTATACGCTTGGAAACCTATGTGTCTGTCACCCCCAAGTACATTAATGCATTTT----CTCAAGAGAATCAAGGGAAAATGATGCTTCA-GAAAGATGTCCCGCATTTATCCTGTGGCACTCAAAGTACCCCAGGTTGAGACGATAT---GAGGAAGATTCAAGCTGTCAAGTTCAGTTTCCCAAGATCTATTCCACAGAAGATGAGCAAATCTCACTTCAGAGGCCACTGACTGAAGGGCAGTCTGGTCCCAGAACCGTGGAGAACTCAGAAAAAAATGTTAAAGTCTCTCTGGAAAGTAGAAGCCTGGGAAAAAACCAAACCAAACCCATTCTCCCATTGCCACCCAGAGATACTGTGAACATTTTGAGCTCACAGGGGAAGTGTAGGCTTTTCCCACTGTCAATGTCTATGTTAAGGGAGTAAGGCAGCCTGAAACCTCTTGCTCCTAGGTCCCATAGTCTCCACTCCCCTTCCAGCTGGAAATTTGTGCTGCAACCAGAGGAACCAGAAATGGGGTGAGAAAACTTAGGGGACTGGGTTGTAAGATCAAAGGCTGGTCTTGCAGCAGTAATGACAGTTCCTAGGGGC-ACTGTGACATCATTGCATTCCACTCCTCCCAGGGGAGGGGACCACATCAGCGCGATGCCCGAGTCGCTGCTCCACGATGGGGGAGGGAAACACACGGTTTCGACCCAGGTCCTCAGAGACGCCAGCCCAAGAAGCCTAGGGAGGTCGAGCTTGGGGCAGCAGGAGGGGAGGGCAGAGTCTGCAGTAGGGAGCCCCGGGAGTCACCAGCCCAAAGCCACCCAGGGATGACTGGTGAGGGCAGGGCCTGGGGCTGGGGGACCCAGGTCCTGGGAGACGCAAGCCCAAAGAGCCCAGGGAGGTTGGGCTTGGGGTGGCAGGAGGTGAGAGCTGATTATGGAGCAGGGAGCCCCAGGAGTCACCTGCCCAAAGTCACCCTGGGGTGATTGGCAAGGGCAGGGACTGGGCTGCTTGCTGAAGGGGTGGGGCTGACTGACTAGGCTTTGGTTGGGGGAGCCCAGAGGGGCTGGGGTTGGGGGGCCCCATCTGGTATGCCTCAGGAGTGGTATGGACTCTGG-CACAGGTCTTGTCATCGGAGGGGATCTGTGGCTGGGTT--GGGGGCCATGACCTGGTGTGTTTTACCTTTTTCTTGGCTGCGGCCAATTTCCCCTGTTGTGTTTTTTCTGACATCGCGGGGTGGGGAGGGAGGCGGGGTTGGGGCCACATCAGCGAAATACCAGTGAGCACTGCTCAATGCCTCCAGTCACCTACCAGGCAGCTGTGCAACTGAGCCACAGGTGGCGTAACCAGGGCACCAATGGAACG--CAGAATAGGGGCGTGGCCTTAATGCTCCAAGCCCATTGGTCAGTGAGAAAGATGAAAGGGAAAGGAGGCGTGGCCAGGCAGCAGCATGTCCAGAGGGACCTGTGGCATC-ATAAGGAAAGCTGCCCATGCAACCGCTGTCCC------CGCCCACTCAGAGAAAGGGGAGGGGCCGC s mm7.chr2 150251692 1225 - 182548267 CAGAAAGGGCACAGCCCTTG--TCATCGCAGAGAGAAGTCT---------CTACAAATCTATGAAAATGCCAAACCAGA---CTTTTATGGTTTTTTTCTCTCAAAAGAAGCATGGGAAAGTGATGTTTCCCGTGAGATGCCTCACCCGCATCCCGTGCTTCTCAC--CACCCCAGTTGGAAAAGACATTCTGGCTGAATTTTAAGTT---AAGTTCAGTTCCCCAAGA-------CAC------TGATCAA----------------CACTA--TAACATGCGTTTTGCTCC----------------------AGAGAGATTACAGTCTCTCTAGAGAGCAGACAACC-----AAATCCAAACCAAACCAATCCA-----TGTCAGCAAGGGGTGCTG--ACAGTGTTGTGCTCACA-------------------------CTAATG-CTAAGTTAAGGGAATGCGGGCGCCTACAGCGTCTCCGCACTAGATTCCACA--CTTGGGCTCCCTTCCAGGTGGAAATGGGTTCT-CCACCAGAGAAACGGGAAAAGGGGCAACAACA-TTAGGTGAGCAGGTGGAGCAATCCAAA-CCAGACTCGGAGTAGTAATGACAGTTTCGAGGGGGGACTGTGACGTAACTACATTCCACTCC------------ATACTAC-------CAACGCCCGAGTCGC--------------------------------------------------------------------CTA----------------------------------------------------------------------------------------------------CAGGGCC---------AGGACCGAGGACCTTGGAGAC---------AGGTGCCCTGGGAGGTCTGGATTGGAGCGTCCGGAGCCGGGGGCTAA------------GAGACCCTGT-GTCAC-TGACCAAAGTCACCTAGGGGCGACTGA-GAGGGCGGGGGCTGGG----TTGCTGAGGGGGCGGGGCTGGCTGAGAAGACTTCA-CTGGGGGAGCCCAG-GGCGCTGAGG----GGTTCTTCTACCCGTGTGTCTCGGGAAAGACTCGGACTCTGGTCATGGGTCCTGCCGTTGGAGGAGCTC---GGGTGGGGTCAAGGGGCCGCGACCCGGAGCGCTTTACCTTTTTCTTGGCCGCAGCCAATTTGCTCTGCCTGGTTTCTTCCGACATCCCGGGGCGGGGAGGGGGGAAGCGGGGGGGCCACATCACCACGATCCCGGCAGCCACCGCGAAACTGCTTCCGGAAGCTAC--GGCTTCTCTACAA--GGGCCAGAGAAGGCGGGTGCAGAGCGCCCCTTGGACGCTCGGAAACCCAGCGTGACCTACCTTCTCCAAGCCCATTGGCTGATGAGAACGATGAAC-GACAGGGAGGCGTGGCCACGCGGTCGCGAGGCCTGAGCGACGGGTGGAGTTAACGACGAGAGCTGCGCGCGCAGCCATGACCCCTCACAGCGGCCTATGGGAAGCAGGGGCGGAACCGC a score=4761 s hg17.chr15_random 488555 239 + 784346 ATTCAACCATGGAAG-TTCCTGGCACATACATCAGGTATTCACAATACCCTTTCTCAGGTGTTTGGTCACTGCTAGTGAGCCTGCCTGGATCAGTGTTTCCCAAATGGCAGTCATTTGCATCTTTGCATTTTTTTTGGGGGGGGGGTTGTGGGGGTATATACCATACCA-GATtttttaaaaattcacattaaaaatacatg-------------tataaaatgtgtaaag-------tgcactaatctaaagtgcactgg s mm7.chr7 71306233 248 + 141766352 ATTTAACAACAGAAAATGCCTGGTACAATCACCAGGCACTGATAATACTTTCTGTTAAATATTTTCATGATGGTAGTGACCTTGTCTGGATTAAAACTTCCCAAATGACAGTGACTTCCATTCTTGCAGTTTTT------GGCAGGTC-------CATATCTTGTATTACTATTTTTTTTAAACTGACTTTGAAATTATATGAAGTTAATCTTTTCATATAATTCTTTGAACATTTTCTTCATTCATATAATATACTTTGG a score=46861 s hg17.chr15_random 488794 2541 + 784346 atgtattttttattgatgtaca---------tacttttgt---------tatccatcacccaggtcaaaatacagaatcagcac-cacagagggttccctcctcctccttcccagccaataatcttctcctcctacctaaccaactgttcttacttcaatcactgtcaactagtattttacattcttgaactgcatataaaGTGTCTCAAGTTTCACTTAACACTTTTCTTGAAATACACTTGTTTTTTGCCACTTTTTATTTGACCTAAGAAGTAACATTAATGAAACAATGATTTGACGTGATAGGCAT-TTCCCTCCTAATGA-GCACTAAAACACTTAACTATTTGAAAAAAGAAGTTTCTCCGTGTACCAGCTAATATATTCTCCTCGGCCGCCGTTGGTACACGGACCACATTTTGTTTCTC-AAAGCAATCCGATGATTTCTGAGGTCCTTTGCAGCTTGAACACGGAACGACTGTGGTGATCGAGTAGCCAAAAGTTCACGGAATGCACTGTCACAATTGTGATTCCGCCATAGCGCCGTGCATCCATCCAACACTTGTTTAATACCTATATTTAATACCTAATACCTTAGACTGTCCTAGGCTGTGGACAC---AGAAGACTAAACCCCACTTCCTGAGTTGAAGTGGGGGAAATAGAGGAGTAAATCATTTCACGATGTGTGGTTAAATGCTACAGCTCAGGTAACCACGAG-CACACAGAGAAAGGGCAGTTTCTAGAAACAGGGCGGAGAGGAGACCGTGAGTGGGCATTTCCCAGAGCAGTCTCTGCCAGCCACCCTGCTGTGATCACTTTGCCACAGAGCAGCCCCGGCGGTCAACCTCAGCCTCCCTTAGCAACCTGAGCGCCCCGCCCAGGTGCCTTACTATTGGTCTCGTGGAGCGGGATGGGCAGCTCTGCCGTGCAATCCCAGCTCGCAGCCCTTGCCCCGCGTGTACTCACGGGAGGACTCGCAGACGTTACTGCCCTCTTGCGTGCCCCGGCCACCCCCGGGCGGCTTGTAGCCGGTGCGCGGGGTGGCTGGGGCTACGTGCAGAGCTGTCGCGGAGCCGGAACAGCAGCGGTGAAGCCCCTCGGCTCGGCCGAGAccgccgtgcccattgctcgcctcggttgccgccgctttagccgcagccgctgctgccgccgccgGGGGAGAGGCAGCCTATTGTCTTTCTCCGCGGCGAAGGTGAGGAGCTGTCTCGGCTCGGCCCGCGGGGGAGCCCCGGGAGCCGCACGGTGAGAGCGCAACTTAGTTGGCGGAGTTGGGGGAAGTTTTGTGATTTGAGGAGGGGTCGGGGTGCGGAGCGCGGCCCGTCCCCTGCGGCCGCTCGGTGGGGCGGGCCCCAGAGGAGGGTCGGGGGCTGCGCGGGGCTTCAGGGGCGGGCGGCACGGATGGGTAGCCGGGCGGCGCGGGGACCTCAGCTTTGCGGACCCCTCCTCCCTGCGCATCACCCTTCTCCCGCATTGTCTGCTTGGGGCTCGGCGCGCCTCCCACTCCGCAGCCCAACTTGGGGGCCGTCGCCGCTTTCCGGATggggggcgcgcccggcgg--cggATGGCCCCGAACCCTTG--CCCCGGGTCCCCGGGT---TGGCGCC-GCTGGGGCGGACTCACTCCTCCCCTGGGGCGGGCGGCCGCGGTGTGGAGTCCGCGCCGCGAACAAGTGCTGCGG--GCGCGAGGGAGCGGTTCCCCGGGGCCGACGCGGACGGTAAACCTGTCCGGCGGCGCCCGCCTGCTGGGGCCTCTCCGCTGTTTCTCGCGGGCGCGGCCCGGCTGAAACTGCGACCGTCGGAGGCGAGCGGCCCTCTGGGACCCGT---GCAGCCGGTCCACCTTGCAGCTATACTTTGAGACTAAACATTTT-------------TTTTTTTTTTTTTTGCAAAGGCAAACCGGTATGTGA---AGTTGAAAAAAGCAAAAACCCTCAAATTTTCCTTCTTTCTTCTTCTTTTTTTTTTTTAAATCAAGAAAGGGGGTAGATAGGTTTGT-TTTGTTTTGGAAATAGTTTTTATAGCAGAGTGATACCGTCACATTTAATGATCCTACTGTGAATTCAGGAATTCACGATGAAAGTTGGATTGAGCGGTATTTTGGTG-TTCATTCTTTGCTGATACTCAT--TAATGAAGTTAGTTGGAGAATTTATTGC-TTCAGTACA-GTAAAAACCAGTGTGCCTTT-----------------------TTTTTTGTTACTACTCCCCCCTCCCCGCATTGTTTTATTTTTCGAAGAAGCACTTTATTCAGTT----------TTTCTAAGCCACGGGATTGCCCAGATGAGGACCAACGGTGCAGTTCTTGAAAGGTCATT-ATTGGCAAGTTTGTGAGGGAGCT----------AAGATGAGT-TGAGATAAACCA--GTGTTACTGTTCTTGTATTCTGTCGTGGACTCTTGGGGATTTGCAGGCTGCATTAAGTACAAGTCTGGTCCAGTTTTGGGTGCACGTATTCCACTGAATTTGGTTCGTCTGGCTTATTATATGAACATGATTCTGTTTCACTTCCCCAGATGGAACTAGCTTAAATGTCTATCATTTATAGTGACAAATGATCAAAATGGCT s mm7.chr7 71306656 2162 + 141766352 GGGTATTTatcttaggggtacagccacataatattttcatattaatatgttttgatcacctaaataaaaatgcaaggccagtactcgcagaga-ttccattctgttccttcccagtcaatacccttctcctcctaggaaactacct-ttcttacttcgaccacaataaa--------------tATTAAACTGCACAGAAAACCTCACATTTCTTGCGTAATATTCATAATCCCCGGCTCCCCCCCCCCCCAACTTTCTATT-GACCGAAAAAATAACAT----GTCAAAATAGTTTGGCATTATAGGCATGTTTTCCCTTAATAACACATTACAATATGTAACTATC---AAAAAGAAGTTTCTTTTTGTACCAATTAATGTAGTATCTTGGGTCACCATTGGAACATGT-CCATACTTGGTTTCTCCGAAGCAACTAGATGGTTTCTGAAGTCCATAGCAACTCAAAGGCAATGATTTTGTGGTGATCGAATAGCTCAAAGT----------CACTGTGACAATCTT--------------------CACCCATCCAACA---------TACTTG------------AGTACTTTGTGCCGCTCCA--CCTTGGACTCTTAAGAAGACT---------CTATTGAGTCTTAGCGT--------------------------CAACGTGTGGT-AAGTGCTCCGACTTAGGTAAGCACCAGGCGCACAGAGGAAGGGTGGCTTCCGGTGATGGGGCGGATAGGAGAAGGTGGGTGGGCATTTCCCC-AGCAGCTGCTGCCAGCCACCCGACTTTGATCACTTTGCCGCCTGGCAGCAGTGGCGGTCAACCTCATCGTTCCTTAGCAACCAGAGCCAACTGCCAAGAAGCCTTCCTATTGGGCTCACAGAACATGATGGGTAGTCTAATTGTCCAATAGAAACTTTTAGGCTT-----------------------GGCTCGT---------------------TGCACCGCCCACCCC-GGGCCGCAGGCGGCGCATGCGCGGG-TGGGCAGGTCTGTGTGCAGGGCGGTCGCAGAGCCGGAGCTGCTGCTGCTAAGCTCTTGGGCTCGGTTGAGACCGCCGTGC---TTGCTC------------------CTTGCTCCAGCCGTCACCGCCGCCGCCGAGGGAGCGGCCGCCTATTGTCCTTCTCCGCGGCCAAGGCGCGGAGCTGCTCCGGCTCGGCCCGCGGGGGAGCCCGGGGAGCCGCACGGTGAGAGCGCAACTTAGTTGAGGGAGTTGAGGGAAGTTTGGGCGTCTGAGGAGGGGGC---GCGCGCGCAGCCGCCCCTCCCCCTCGGCTGCTC--TCGGCCGCGC------------GCGCGAGCTGC---GGGACGCGGGGACGCGCGG---------------GCGCGACGCGGG----------TGGCGGACCCTTCTT---------------------AGCATCGGCAGCCAGGGG-------------------------------------------------------TGGATAGCGCGGCCGCCGATCCCGGCCTCCTCGGACCCACGTTCCTCTGCTGCCCGCTTCTGTGGCGCCGGCTGCGGC---------TCTCCTCTGAG--GGACGGCTGCTCGGTGGGGCGCGCCGCTCGAACAGAGAGTGCGGCTCCGGGAACGAGCAGCTCCCCGGGGCAGTCAAGCCGGGTAAACACTGCGCGCCCCGGCCACCTTTGGGGGC----------TTTCTCCCGAGATGGGGAGGG-----------------GGGCGCGGTGGGCGCCCCGGGAACGGTGGCGCATTCGACTC-CTCTGCCCCTCGAGCTCTAGTGCAAGCACTTTGAGAACTAGCGAATCACTGCTTTTCGTAAATAGGCTCGCTGACACTTAACTGGGGTGCGAGACGC----ACCCTCAG--TTTATTTCTCGCT----------------------AAGAAAG----------TGTCTGTCTTTCGGCTGAAAATATTGGCTAACTCTAAGTG-----------TCTA--GACTCTACTGTGAACTCAGGAGTTCACAATGAAAA-TGGATTGAGCAATCTCTGAGTGTTTCAGTCTTTGCTTTTCCCCTTCATAATGAAGTTATTTTGAGAGTTCATTGCGTTGAGCAGATTTACAAAGTGATGTGCCTTTTtgtctgtctgtctgtctgtctgtTTTTTGTTACTACCCTCA---------------TGATTTCCCGAAGTCAC---TTACTCATTTAAACCCCCACCCCCCAAACTTTTGGATTGCCCGGGTCAGGAGGAGCGCTCCAGTTCTTGAACGTGCATTCATT-----GTCTGTAAAGAAGTTCCTATCAGTCGAGATGACTCTGAGATAAACCAGTGTGTCACT----TTGTACACCATCAT---CTCTTGGGAAT----------------------------------------------CATTCCGCTGCATTTCGTTGACTAGACTTGCGCTGTAATGGTAATTCAGTTTTAGCTCCCAAGAGAGAAC-----------CCTATCATTCATACTGAAA------CACAATGCCT a score=16206 s hg17.chr15_random 491346 755 + 784346 TATTAACTTCAGTTGTAGTCCTTTACCTTACCTTCTGCTAAATGAAAAAGAAAAATTTGACAAATACTGTGTGCGTCAGTTTGCTCTGAGTGATTTCTCGTGCTAAGTGAGTCCTGTGGAGAAGC-GTTCCTGGGCTTTTCTGGTTTG--GTGGGCCTTGTGTTAT---AAAACCAATTTTCTTCACCTGATGAAGCTAAAGACAAATTTTCTTCAGGCACAGGCATTGCCCTTTTAAACTACAGAGCCACTTGTAGGATTCACAATACT--CACTCAATGGCTTCCCTTCCTGGCAGTGTGGTTTTGTGTGTGTGTGTGATTGTGGGGAAGGAGGCTGACAGAGGTTGGAAGGGATTGTCAGGGAGGGACATCATGTAAGCAAGTACTAACAACATAACGTGACGAGGGCACCAGTTGCTTTCCTTCTGTGGGCGGTGATGGCATGTTATACTGTAGGTACTATTGTTGTAGGATTTCTCACAGTTCGTTTGCCTTGACTAAATGGTAACTGCACACATACTATACTATAAATGGACTCCTCCTCTAGTCCTTTAACTCCTTGAGGGCTGTGATAGACCTTATTTAACTTTGTACCCTCTTTGCCAGTGGTTTT----------------------------------AACATAGTGCAGGCCCGGTATGTGTTTGAATTGGGT-AAATTACTTTTACTGCCTAGTGGTAGCTGGTGTACACAGGAGAGGGCCACCAACTCTGGGGACTTGTCCAAAATGACAATTCACTTGCAGATCTCTGATGAAATTTACTTTA s mm7.chr7 71308848 688 + 141766352 TGTTAATTTTAGTTGTATTTCT-----TTGACATTTGTTAAACT-TAAATTTTTCTTTGAAGGCTACTGCTCATGGCATTTTGC---------TTTTTTTTTCTATGTGAATAACATGGACAAGTGGTGTGTGGGGTTTTCTGTTTTGTTTTTGGCTTTTCTTTGTATGAAACCCAGCTTCGTTTACCTGATGAAACCAAGGAAAAATATTCTGAAGGCACAGGGATT--------------------------CAGGACTCACAGTCTTTGTGCTTAAT---TTTCCTTTCTGG-----------GGTGGGTGTG-GTGA-----GCAAAGGAGGTGGACAGAAGTTGGGAG---TTATTGGTTAGTTACATAATATAAACAAATACT-GCAAAATCGGGTGGCCAGGACA-----------CCTTCTCTGGACTGTGGTAACATGCTACAC-----ATACTTTTGTTCTAGGGT------------ATTTG-CTTCACTAAATGGGAACTATG-------TGTAGTATAAATGG---TCTTTTCTAGTCTTTTTACACCTTAAGGATTGTGATGGGTGGTATTTTGCTATG--CTCTGTGTGTGTGTTGtttttttttttttttttttttttttttCTAGAAAAGTCCACACAGTTGGTGTTTAGCTTTTGTTTGATTTAGGTGAGGTGATTTTCACTGGCTAGTGATA----GTGTACACAGGAGAAACCCATTAATTCTGGGGCCTTGTACAAAATGACAATTAGCTTGCACATCTGTGGTGAAATTTACTTTA a score=798 s hg17.chr15_random 492101 110 + 784346 AAAGGACTTCTAACCT---TTTTTTTAA-----------------------------------------------TCTGTCGGTTATTTTTTGAAAAGAAGTGGGGCTTAACTAGTGCTCTAAGGATTTTAACAAGAGA--------------TTCCGATTTAGAAATCTGTTC s mm7.chr7 71309744 174 + 141766352 CAAGGTTTCCTTGCCTTGGTTTCCTTAGGGATAGATAACGCGTGTGTATCACTTTTCCCAGCTTTAAAAACTCTTTTTGTTGATTTGTTCTAGAAAATAACTGGGATTTAAAGAGTACACTCTGGACTTaaaaaaaaaaaaaaaaaaagaaaTTTTCAGTTTTGAAATGCATCC a score=6510 s hg17.chr15_random 492382 305 + 784346 GCCTCCATTGTGAAATTGGAAAAAAATTAGAAATTTTAgaaaaaagtacgccctttggagctaggta-----gagttcagatccccacatttc-----------------cattgagtagttgcatagcctctcagagcttcagcttcctactccttaagggttagtaacatgctttgcagtgttgttaggaatcagtgaaactgtgtgagatacttaactgcagtatctaacatggagtaggtagctatttcctggtagctgtaATGATAATAATTTTGATACGTTTTTACATGACTT-----AAGCATTCTGAAAAGTCTGATGCTTCTG s mm7.chr7 71309980 301 + 141766352 TCCTTCATTGTGAAATTgggagggagc---atagtttagaagaaattcc-ctgtttggagttatgtaaatctgagttcagatcctcagctttccttccacggttttgaagccttgagcactgcacttgactct-ggagctt--gcttctttccttgtaaggggtagtaataTT-------ATGTTCTTAGGAATGCATGAAATGGTCTAGGAGACTTAG-TACACTGTCCAATAT----------TCTGCTTCCTGGTGGCTAAAAAG---ATCATTGTGGTACGGTTTTACATGGCTTTTAAAAAGTGTTTTTAAAG---TGAGGGTTCCG a score=4768 s hg17.chr15_random 492760 169 + 784346 TTCAAAGGTGTCAGATGAACTGAAGGATAATGGAAACAATAGCAAATTTATCTTCTCAGTCACCTGTGAGTCTTCCTTTGAGAGTGGGACTTGCAGAGTACTTGGTAGGGTAGAGCTCTTTGTGACTATGCTATTTAGGAAATGGTGAGAGATGGATTGTTTTCAGTAC s mm7.chr7 71310422 156 + 141766352 GTAAAAGACGTCCTCTGAACAGAAGGATGAGAGAGGCTATACCGTTTT----------GTCACCTGTTAGCTTTCTTTT--GAGTGGGA-TCCCAGGTGCCTTGGTAGGAATGAAATCTGTACAGCTGTATAGTGTGAGAAATGACAAGAGAGAGATTGTTTTCAGTAC a score=9296 s hg17.chr15_random 492964 263 + 784346 TCCTTATTTTACCTTAGTCTTGACAAATAACAAGTATGGA-TTATGTCTGTATTTCTCAGACTTGTTTAAGGTAGAACTGGACTGGGTGTTAACAGTGT---TAGTTCAGCAGAGACATGAGCAAATCACTCACTTCCCCTTCAAGATAACACTTTAAAGGTGCCACCATTTGCAGAAGAAAGCAGTGATTTAAAGCAGCTATACTAGCACAGTTTAGAATACTTACACTAGCTGATGGAGTAGATACATTCTAGAAATATTTACCT s mm7.chr7 71311046 246 + 141766352 CCTTTGTTTTACTTCGGTCTTGA-AAATAATATTTGTGGCTTTATGAC---ATTTCTCAGGTTTGCTCAAGGTAGAACGGGATGGAGTGTCAGCAGAATACATAGTT---CAGAGACTCGAGTACACCACTCAGTTGC--------------TTTTTCAAGTGCCACTATTTACAGAGAGGAGCAGTGGCTAAAGTCAGTTGTACCAACTTAGTTCAGAATGTTTAAAGTGCCAGACAGAGTAGATAAGTTTTAGAACTGTTTACCT a score=1589 s hg17.chr15_random 493591 45 + 784346 GGTCACACTTACAGACTGAGGGTAAAAACATTCCTGACAAAGCTA s mm7.chr7 71311292 44 + 141766352 GATCAAACCTG-AGATTGTAGGGATAAACATCCCAGACCAAGCCA a score=3737 s hg17.chr15_random 493955 180 + 784346 TTTGATGTTTCCTTCTTTTAAAGTTAACATCTAGCACTTGAATAGACTTGGTTATTACTGATGGGGACAGGCATCCATTTGGAAGTAGCTTCCCTCTCTCTCTCTTTCCCAGGTTAGGCTGTCTTATTGCTGTAAATGGGGAGAGAAGAGAAAGCCGTGGGTGGAAGAAAG--TGTTTCATg s mm7.chr7 71311336 162 + 141766352 CCTGATGCTTGCTTGTCTTAAAGTTAGTCCTGAGC-----------TACAGTTAATACTGATAAGGATGGATATCCACATGGAAGTGATTGTCCCTGTGTTGTGT------GGCCTGCCTAGCTTACTGTTTTGA---GGAAGAGAGAAGGAAGCTGTTTGTAGGAAGAAGTTTATTTCATG a score=7616 s hg17.chr15_random 495490 353 + 784346 attatagcttgctgactggatgtaccatgctgcctctttttataaatgaagttttattggaacacagccacacccattcattt-acatattgtttaacagagaccatatgacctacagaccctaaaatatttaccactttgcgcttcgcaggcattttgctggctactgCTGTGGACACCAATTTTAATTTAGGTAGATAAACTTTTTTGTAGCTTCTGAGGTTTTGCATTAATTTGCTCAGGCATATAGGTTGGTGGAAGTGCTTTCTGTTCC-----TTCTCCCAAACCAATCACACAGCCATATAACTTCATGCCTGAGTTTCTGTGTGGTCCTCTATAGTGAGTGAGTTTTTACA s mm7.chr7 71382909 321 + 141766352 ACTGTAAATGGCTTGCTGGATG-ATTCTGCTGTTTCTTTCTATAAATCAAGCTTCCATA-AATGCAGATGTATCTATTAATTTTACATATT--CTATCAGAGAC---ATGAACCATAAAACTTCAGATATTTGCAACATGGTCTTTAAACAGTGTTT--------------GTGGACACTAGATTTATTT---GTTTGTAATCTTCTT-GTGGCCTTTAAGATTTCTCACTCATTTATGCAACCACGT-------------TGTTTCCTGTGCCCCTTTTCCCCTCAGGTCAGCCTTACAGCCATAGAATTTCATGCCTTAGTTCCTGTGATATCTTGTATAATCATTACATTTCTACA a score=6296 s hg17.chr15_random 495857 148 + 784346 AGCATGAATTTCAAAAATCTCAACGCTTTTGCTCTTGCTAATCTTTGTAAACTTTGTACACCCAGTGCTGGTACATTCTGATGATAGTGCCCACACTGCACTCTATGAAGAAAAGACTGATGATTGTTTATATTAAAATGCAGGAAGA s mm7.chr7 71383297 146 + 141766352 GGCAATAATTTCAAAATTTCCAAAATGTTTATTATTGTTTATTTTTGTAAACACTGCACACCTAA--CTGTAGCAGTCTAATCATGGTGTCTGTACTGTACCCTATGAAGAAAATACTGGGAATAGTTTACATCAAAGTACAGGAGAA a score=13381 s hg17.chr15_random 496206 369 + 784346 TGGAGAACACTTTAAAAATAATAACAAACATTATTATAAACTAATATATGTGAGAGTACTTAGTTGAAACAAAAAGGAGTTTTAGTAGACAGTATTATACTACATTTGAAAATCAAGGAGCAGTTTATGCAACGTAAAATGTTTACAAACTGCAGCGCAATCTACTGTTTGTGACTGTCAAAGTGTCATGAGGAAAGTGTCTATACAATCACAGAGTTATATTTCCTCACAAAGTTCTTTACGAAGAGTGAAATATGTTTTTATACCTCTCAGTTTCAGTTAGAGGCATATTTTGTGTAATATTTATG-----------GCTTAAAATGGACTAAAGGTCCTGTTCTTGCCTTG---------------------------------------------------------------TCTGAACTTGCCGCTTTTGCATTCTT s mm7.chr12 4609871 418 + 117814103 TGGAAAGCACCCTAAACATAATAG---ACATTATTATAAATTAATATGTGTGATAGCACTTAGCTGATAT------GAGTTTTAATA--CAGTATTAAACCATATTTGAAAATCAATGAACAGTTTATGCAGTTTAAAATGTTTACAAATTGCCGTGCAATCTACTGTTTGTG-------AAATGTC---AGATAGGTGTATATACAAT--TAGAGTCCTA-CTCCTCACAGCATTCTTTGAGAA-AGTAAACCATGCTTTTATACCTCTCGCTTTAATTTAAAGGCATATTTTGTGCAATATTTATGTTAATGTGCCTATATATAATGAATGAATTATTACAATCGTGCATTGCCTAAATCATGACTTGAGGGGAAAAAAACAACAGTTTAGTTACAGTTTTACAAAACCCAAATATCTGTACTGGAAACATTCACATTCTT a score=1127 s hg17.chr15_random 496575 183 + 784346 TGAGTTCAGTTTAAAGAC------------------------------------------ACTTACTTTAA--------CTCCATTTTA---------------------------------AACCCTCGGGCT-------------------------------------------------AGAAATCGTACCACTGTTAATTAGCCACGTTATTTGGTCTA--ACAGTTTTTGTTTATCATTCTGAAACTGAGCTTATCTAATACATTGATAAATTATTTCAAAGGTATTTTTATAGTTCAAATCGCTTCACTT s mm7.chr12 4610406 316 + 117814103 TAATTTCAATTTACAGATGGGTAAGAGAATTGCCTGCAGTCACTAAATGACAATGCAAAGACTGATTTCAAACTGACTTTTCCACGTTATATAGATCACCTGATTTTTCTTTTTGTCTCATCAACATTCTGCCTTTACCTCCTTAAATGCCACGTGTGGCCAGCTGCTCTCTATGCTGAGCTCAGAAAGC-CAGCCCCACTAACTAACTGCATTGTTTCATAAAGTACCTTTTTTCTTTATAATTTTTATTTGGGGCTTCTCTACTATACTTATAAATTTATCCAAAAGTATTTTTATAGGTCAAATCCCTTGACTT a score=34066 s hg17.chr15_random 496773 1061 + 784346 TAAATGACTAGGAATGACCTTCAGATAGCGTTTAGCAACTGTAACCAATCTGACAATAATGTGTTCATCAGGTA----CCTGTGGATTAAATCACATACTGGC---ATATTTAAGCTGAATGTCAGTCTGAAAAATAAATGTACTATATTAATTCAAATACGACTCTTTGTGTAGGTATTTTGTCATATGTTTAAGAAAAAGCT-----AAAGAGAATGGAAATCCTATGACAATAACTCAAGTCTTTCTTCAAAGTGCATGCAGTCTTTTGCAGTACCTCATTCAGCCAAGTATTTGTTCTCTACCTCATTCAGTATAAGGCAGCCTTTAATTTGCTTAGAAGGCAACATTAGAAGGTTAGAGTTCAGCAGGAACATAGAATTTTAAAATGTGACTTCAACTGAATAAATTTGAATTTCTGTAGGGAGTAAAGAATCAAAACACCTATTTAAAGACTGCAAAATATGATAATTATTTTTAAAGTAATTGATTAAACCTGGTAGGTTTTCCCAAAATGAAAAACAATCAGTTCTAAAACCAAAGCTGAT-TTTTAGAAAATGTGAAA-ATGTAAATCAACCCTATCCATAATAGATTCTCTAAAACTTTATCTTACAGTCACTTTCAAATAACTATTCAAAAATGTAACTGCTATATTAACGTCttaaaataatttaaaacattttaaaatatGA----ATACTGTAGTTTAAAACAAAGAATCTAGG---GGAAGGAAAAGTAGACAAAGAAATGCCAATTCCAGTCCAAAGCTGTATTTGCCAAGTTTTCTTAGAATGACTTTTACCGATTTATGAATTCTTATACACAGAATGCATAATGGAAATACTGA---TTTTTGTCTAAAGTGGCATTATTGACTGCTGCTGTGATGCTACTGTAATGTAATACATTATTAAATTGTTTCAAGGTGCTGT-TTTGCCTAAAA-----ATTTTGTGTGTCTTGAAAACTATAGTATT--GGGTATTGAGACTCTGCAAATTCTCGGCATGCTTGGCATGAGGTAATCGGTTTTTATTCTTACAAAATTG-----TAACTATGTAAGTGTGTTTATTAAAAGAACACAAACT s mm7.chr12 4610898 998 + 117814103 TAGATTCTTGGAACTGGCATTCAGGTTGAGCTCAGCATCTGCAATCAGTCTGAAAATA---TGTTTAACAGGTAGGTGCCTGCGGAGTAAGTCACATACTGGCCCAACAATCAAAGCAAATGTCAGTACAGCAAGTAAACTCACTGTGCTAA-CCGACTACTACTC------TAGGCATTTCATCATA--CCTGATAGAAAGCTGCAAGAAAGGAGATGAGTGACAT---ACAATCGTTTACATTGTTCTTATAAGTGCATGCAATCTGTTGCAATCCCTCATCCAGCCGTGTGTTTGCTTTCTTCCTGATTTAAAGTAAGGCAGCTTCTG--TTGCTTAG--------------------GACTTTCTTGGAGACAT--AATTTACACATTAGAACACAG-TGGATCAACTTGAACT--TGTAGG-------------ATACACCAGTTT-AAGAGCACACTGTGTGACAGGCATTTCTAAAGCATGCACTTGAACTTGATGGGTGTTCCAGCAGTGAAGAA-----AAGGCTATAGCCAAAGCTGTTATTTTAGAAAATTTAAAACCTAAAAGTTAACCTTATTGATCATATACTTTCT----CTGATTCTTTGAGAAATTTTGAAAT-----------AATGTAAT-------------ACTTAAAACAGT---AATTGTTTTAAAATACAACGCGATACTAGAGTTCAAAAGAAAATGATTAGGGCTGAGAGAAAAGGCAGAGAAAGAAATGGCAGGTCCAGTCCAAAGCTTTATTTGCCAAGTTTTCTTAG-ATGAAATTTACCAAGTTATGAGTTCTTGTA-----AATACGTAACAG-AATACTGAGACCCTGTGCCTGAA-TGGCATTATTAgatgctgctgtgatgctgctgtgatgTAATAAACTATTAACTTGTTGCAAAGTGATGTATTTGCCTTAAATTTTTATTTTGTGTGTCTTGAAAACTATAGTATTAAAGGTATTGAGATTGTGCAAATGCTGGGCACGCTTGGCATGAAATAATCTGTTTTTATTTTTACACAATTGTAATATAACTATGCAAGTGTGTTTATTAAAAGAACACAAACT a score=71112 s hg17.chr15_random 498287 2389 + 784346 CTCACCAAAGCAACTTTTCCCTCAGGGGGGCTCCCATCTTCTT-----ACTCAGAGAGGCAGCTGAGGCGGG----------------------ACAGTGGAGTTAACTGTAGACCAGGCCAGGGCACAGGCTGCTGGGG----GTGGCC--CCCCTTCCCCCGTGTACATACTGTAGCTGTGTAACATTCTGTAT---------------------TGTACC-TAGCGGAGGTTGCAGCTGGCATATGAGGAAGAGGTTCTTATAATTATTCGCGGCTGGGAAACTTATTCATTGTTAGCATAGGAGCGATGAT--GGGGGTGGGGATGGCGTCATGGCTCCCTGGTGATGGGACCCCTTttttgttttgttttgtttttttgtttttgttttggttcgctttTGATTTTGGAATAAATGGATTTAGCCATACTGCTCGGCCTGGCATGTTCGT-------------GTTTCCCTCA--CTGG-----------------GTCCTGC-----------AGTTTTTCCCACTCAATGAGGAGCCCCAGAGTGTCTCAGCATGTCCAGCTGGGCTGTGGGGAATCTTCCAGGCCTGTTACCTGTATGCTGCCTGGTGATACCTGGTGGATTTCACGAGGACTGCCATGGCGCCTCTGGAGTATAGTCCGGCCCTGA--GAGCCAACAGGTTGAGAAGCCTGATCTAGCTGTGGTCA-----GGAAGACAGATACCAGTGCCCAAGGGCACTGACTTCCATCCACCCCACGTGTCTTCCATTCCGTCCCCCTGCCTCCCTCTCCTGTCTGCACCGGGTGGCCTGTCTGTCCCTCCAGAGTGCCGGCTGCCCCACAGGCTCCTTCCAGGCTGAGTTCAGGGCCCTGTGCCCTACTGGCCAGAGCCGGCTTCACAGAATAAGAGCCAGCTAAGCTCCAGGGACTTTCCAGGAAAAGTGTCCCTTGAAAAGGGTGTGACCTTTTCACTGCTGCCAA-CAGCACCCTAAAAATGGCTTGGCCTCTTCCCTCCCCTGAGCTCCATAGAGAACACAGCCAGCAGAGG-ACAC---ATTCTCTGTCATTCAGAAATGGGTTT----CTCAGCCGAGGGACAGCAGGACTGGTAGAGACTGTCAGGCCACACAGCTGC--CTGC-ACAGCACCGCCATGCTTGGCCAGAAGGGCGGGAGGGATGGC--GGGGGCTGGCTGTCCATAGGCCGCGCATGTCCCGGAAGCTCACTGGAGGTGGTGCACTTTGGAGGGGCGATGTCAGGA-GACAGCTTCCTCTTGCTGGGCTACAAGACTCCACAAGCACAGCACGGGGACTGATTCCCAGTGCTAGAGGCGAGGCAGT--CGACCACatgtatatgtgtatatatatatatgtgtgtgtgtgtgtgagtttgtgtatgtgtatatatatgATAATTTATAGCTATTTATAGAACAGGGCAGGGGCA-TACCACAGAGGGGGCACAAGTTTTCAGCAACGGTCACACCTGGATGTGTCAGCTCACCACTACAACAGACTAAGTCACAGAAGAAGG---GGGCTGGCTTTGGGGCTGGGGGAGCCACTGTCAAGTCACAGGACACCCACCCAGGCAGGCTTGGAAAGGGAGGTCTCTGAGAAG-AGGAGGAATCTGTTTAGAGGTCGAAGTGGGGCCTGGGGCTCCCCGGATGGGATGGACTTGCCTGACCCAATCAGCTGGCAGTTGGAGAGAAAGCAGAGAGAAAACGGGTTAGAGAAAAGCC---AGAGCTGGTGAGGCAAGTGCAGAGTATGGGTGCGCTGCAGCAGCTGTGGAGGGCCGGGGAGGGGAGGGCGTAGGTGTGGGCAT-GGCAAGGTTCCTGGAAAAGAGGGGCTGGAAGGGAAAGGGGAGGGAGATGGAGGGAGAAGCCAGAGCTTCATAGGTAGTGCCTGGGGACTGCGGCGGCCCTCCCCACCCCACACACGCTGGCCTCTTTCATGGCACCCAGGCAGTCCACCCATAGTTCAGACGAATGCTCAGCCCCCTCGGGCTTCTCTCTTCTCTGGTCACCCTGTCTTCCAACTCAC-GGCCCAGGGCCACCTCTTG-CTTGGGGAGCCCCACCCAACAGCCACCAGGCCTGATAGAAAGGGAACACTGCTTGAACCAAAAATGGTGAAGCTATAAGGGATGGATGACTGGAGTGAGTGCCAGAGGCCCCTCTGGGTGGTCCAAAATCCCAGGGTCCTCTGAAGGGACCCTGGGGAAGGCAGGGAGGGCAGGTAGCTGGATGCCACTGGCCATAGACTTATAAGTCTAAGAGGGGAGCCTCAACTGGTTGGCGGGCGTGGGGCTGCAGGTTGCATAGGTGAGGCTGGGCCCTTCCTGCT-GGGAAAAGCAGAAGAGGGAGAGTCCATGGCAGGAGAGGCAGGTG----------------------GGCTCGCTAGGCGGAGCTCAGCTGG---------GCCAGCAGGCACTGTGGTCCCCTTGGCTGAATAGCACAGGCGACCCCTAGGAGCAACAGGCCAAGGTGTGTGAGCCTGCTGGTCGGC s mm7.chr2 32314830 2302 + 182548267 CTCAGGAAGGCA---TCCCACTTTGGAGGGCTTCCATCTTTTTGAGGCACTTTGGGA--CAGGGAAAGTGGGTACCATTCTCTCAGGCCTTATGACAATTGGGGTAACT--ACGCCAAGC-AGGACAGAGGCTGCTGGGGCAGGGTGGCCTTCCCCTCCCCCGGTGTACATATTGTACCTGTGTACTATTTTGTATATACCGGGGTAGGGACACCCCTGTATCATAGTGGAGGTTGGAGCTGGCAAATG-GGAAGAGCTTCTAATAATCACTTTGGGCTGGGAACCTTATTTATTGGTAGTGTTAGGTCAGAGGGCAGGAGGCGGAGACAAGGTTGTGGC-ACCTGCTGATGCAGCTCCTCTTTA--------------TTTTGCTTTTTACTTGG---------------GAAATAAATGGATTTAGCCATACTGCTGGGCCTAGGGTGTTCGTCATTGGTTCTGGGGTTAGCCTCAGGCTGGCACTGAGCAGGGAATGTGTCCTGCCTGGAGAGAGCAGGCTT--CTGGCCTGTATGGAGCCCAAG---GTCTGAA-GTGCCTGGCAGGGCTGA---------TTGACACCTATCACCTATACACTGCCTATTGAAGCCTAG-GGACCCCAGGGGGAGTACCATGGGGCTACAGGGACAGAGCTT---CCTTACTGAGTAAGAGAGTC---AAGCCTGACATA-TAGTATACATAGGTGGGACTCGGGGTGCAGCAACTAAGGGCGCTGACTTCCAGGC----CAGGCCTCTTACATTCCGACCCTT---CCCCTTAGTCTGTCCACACTAGA-GACCTGTTTTGTTCTTTAGGCTGTT--------CACAG----CATCCTGGCTGAGCTCATGATACTGCCCCCTAGTGGTGTAAGCAGGATTCGTAGGATGAGGACCTGCTAAACTC---------------ACAAGCA-CCCTAGCAAGGG------CCTTTCCTCACCCTCCATTCAGTGCCC------------AGTTTACACCGTCCTCTCAGCCCCAGAGAATACA-AACCAGCAGAGGTACACGCAATTCCCCATGATCCAGAAATGGGTTTTATTCTCAGCCAAGAGACAGCAAGACTGGTGGCTACCAGAGAACTGCACAGCTGCTGCTGCTGCAGCATCCCCTTGCT------GCAGGGTTGG---GATGGCCAAGGGGATGGCTGTTCACAGGCCAGG-AGGACAGGGGGGCTCACTGGAGGTGGTACACTGGAGGGGGG-GTTGTCAGGATGACAGCGTTCCCTTGTTGGACCACAAGACTCCACAAGGACAGCATGGTGGTTGATTCTGA-CACTACAGGCGAGGCTGTGTCAGCCatatatatgtatatatatgtatatataggtat------------------------------------atttatagatatttataGAATGTCGCAGGAGCAATACCACAGAGGGG-CACAAGTTTTCACCAACA-TCACATCTGGATGTGTCAGCTCACCACTACAACAGACTAAGTCACAGATGATGAATAGGAC--GCTTTGGGGCCGGGGGAGCCACTGTCAAGTCACAGAACAGCTGTCCAGGCAGGCTTGGTAAGGGAGGTCTCCGAGGAGTAGGAGGGATCTGGTTAGAGGTCGAAGGGGGGCCTGGGGCTCTCAGGACGGGACGGACTTGCCTGACCCGATCGGCTGGCAGTTGGAGAGAAAGCCGAGAGAGAACGGAAGAGAGAAAAGGAAGGAGAGCTGGTAAGGCAAGAGCA--------GCCACCTCCAGCAG------------AGGCAGGGGCTGAGGCAGGTGTGGATGTGGGCAGGGTTCCCGGAAGAGATGCACAGTTGATGAATGAAAGGGAAGATGGGGTGCTGGGCCGTAAC-TAGCAGGTAGTCTGAGTAGAGGCTGGTGGCCCTCTCT-TGCCACACACAC-GGCCTCTCACACACCACCCAGGCAAT--------------------------GCACCACAGGGCCTCCCTCATTTTTGCTCA--CTGTCTCTCATCTCACTGGCTCAGGGCCACCCCAAGCCTCAGGGAGTCCCATGTAACAGCCATGAGGCCAGA------------AGTGCTTGAACCAGGAG-ATTGAAGCTAAAGGGGATGG----CTGGAGGGAGCGCTGGAGGCCCCTC-AGGTGGTCAGAAAGTCAGGAGTCCTCTGAGGGGACCCTGGGG-AGGCTGGGA-GGCAGGCAGCC-GATGCCTGCGGCCACAGACTTATAAGTCTAAGAGGGGAGCCTCCGTTGGTCGG-------GGGGCTGCAGGTCTCGTAGGTGAGGCTGGGCCCTTCCTGCTGGGGAAAAGCAGAAGGGTGAGCGTCAATGGCTGGGGAAG-AGTTGGGACAGGGTAACCGAGATCTGTGGCCAGCCAGGCAGAACTCAAGTTGACTTTCCCAGTCAGTAGACAATGCATTGCCTTCGGCTAAAAGGCACAGGTCACTCTGAA----AACAGGTCAA-ATGTTGGAGCTGATGGGCTGGC a score=9304 s hg17.chr15_random 501011 602 + 784346 GTGTGTGGGTCAGGAGCAAGTCGACAGGCCCTGCTCCTTACCCCTTGGAAGGGACTGCCACCAGGGGCAGTTCTGACTAAGGCCTGGGAACCCATGACTCAGAGCGTGGGTCCCCAGG-TCTTGCTGGGCCAGCCTGGCTGCTGCAG--ACAGACAGGAAGCACGTCTGAC--GCTCCTCCACCCTCGGTCAGCACAGCGGGGCTGGGACTCACGCTAGCCTTCCCAGGAACTTGCTTTCCTGCGTGAACTCTGGCAGGCTGCCCTCTCTGTGCAAAGCCATAGCTGGGGCCTGCTTGGGGCCCTCTCCCTCTTTCACCTGCTCAGAGTGGCCTGGAACTTGGAGGTGGGCAGTCGGCGCCTAGGA-------TGGGCctgtgtcactagggcatgtgtccttgggccagttacttcctcttagggccttgggctcctcctctga--gaatggggcgtgttggtgtgaaatgaGGTGAGCATGTTGATTTGAGGAGCAGCAGGACA----GACACCTGCAGGCAGCCCCCCTGGCCACATTCCCCTCCCTCCCTTC-----CAAGTCCTGGGACAGACGCTCTTCACCAA-GGGGTTCAGCCTC-TGATGCTCTTTCTTGGTCTCAG s mm7.chr9 33998093 560 - 123828236 GTGTACGAGTCTTGGGCAAGGAAAT-GGCTCTGCTCCC--ATCTTTGTGAGGAGTTGCCAT-GGGAGTGGATTAGGCAAGGTTATAGGAAGCCATTACTCAGAG--TGGATCCCTGGGGCCTCTTTGGGCCCACGGGGCTGTTGCAGGCACAAGTAAGCAACAAATCCAATAAGCTTCTCCACCCAC----AGCATGGTAGTGCCTGGACGCACACAAGCC--ACCAGGGACTTGCTCTCCTGAGTGA--CCTGATAGACTGCCTGACTTTGACCGAGCCATG---------TACCGGGAGCCC--------------------AGAATAG-----------GAGGTAGGGGTTCAAGGTTTAAGAGCTATACTGAGCCTGTACCTCCTAGGTATGTACTCCTGGGCCAGTCCCTTCCCTCCA---CTGTGACCTTCTCACCTGTTTGACT--------TCAGGATGAGATGGCAGGAGCATATGGAACCCAGAGCTGGGTGAACATCTTGACCCCTGAGAGCGCCAACCCCCACTCCAGTCTCCCCACTCCTAGGTAGAGCAAGTCACAGGACAGGCGTAA--CACTGACTGGGTCCACCCCCCTGATGCCCTTTCATAGTCTCAG a score=2192 s hg17.chr15_random 501940 314 + 784346 GGAGTGATTTTCAGTGGTGTCCTCTCCATCCCCAGCATACACCCAGCCCTGAGTGGCTGCGGCTGCCACATGCAGGCTCCAGGGCTACATTTGCCTTTCGTCCAGGGTTGTCATACGCTGGAGAGTAGAATGTGAGAGGTGACCCCTGTAGGCTGCAGGGtggcctctctgaaccttagtgtcccccacctgtagaaggggc-gtaacaccttccagggggagggctgaggaggaaatTGTCAACGGCTGAGTCTAAGGCTCACAGCCAGAGGCCAGGGTCGGATCCAGGGCTGGGCCTGGGCCTGGGAGGACAG s mm7.chr9 33998653 213 - 123828236 GGAGCGACTTCCAGTG------TGCCCAT----------------GTTCTCAGTGGCCGAG---------TGC---CTTCATGCTTCCACGTGCACCTC---------------ACTCTGGCAAATAAAATGGGACAGGTGCCCCC------CTG---------------GAACCTCAGGGCCTCAAACTTGGAGGAGGACCCATAATGCCATCCAGAAG-----------------------ACTCCTGAAGAT--GGCTCACAGCCAGAAGGAAAGGGCAG--TCAGGG----GCCTAG-CCTGGGAGGAAGG a score=2891 s hg17.chr15_random 502291 41 + 784346 CCAGGACCCTCTTCAAAGCACCTTCATGCCCATCTGTTCCC s mm7.chr9 33998892 41 - 123828236 CCAGGATCCTCTTCAAAGTACCTGCATGCCCAGCCGCTCTC a score=31616 s hg17.chr15_random 502694 1254 + 784346 TCAATCCCTGTGGAACA--GGTCTCTGAGGACCACAGAGTGGGGCCCCAGGGAAGGCTGGGAGCCTGAGCTGAAGG-----CAGG--CAGCAAGTAAGG---------------GCCAAGCTGTGCC-CCTGCCCAGAAGACCTTCCTGCCCCCAGAACCCCACCCTCTGCAGACAG-GCCTCCCTGGGCAGCAGCCCCCTGGCTTCCGAGGCCTTCCGTGCCT-CACCAGATGCCATGCTCT-CAGGGACTC---GTTTGCTACGCTGCCCCCTGCAGATCTGCCCC-AGAGGAGCAGGTGAAAAGCCGC----------GCCTGCCGA--GGTGCTGCAGCGGTGGAGTTTTGGGCAGAGG--GGTCGGGGGAAGAGTTTCTCACTTTTAAGATTCCCCAAATCCAA-GATGAAGTCACACTGTGCTTTAGAATGGTAGATGCTCATTTATGTAAAATCATAATAAATGTTACACAAACTGTTAGAATAAAAAAATACCTTTTTCGAGGGGGA-GGAGCTCCCCAGCCTGCCGCTGGGTAGTGAGAGGGGGTTAGCACCATTAGGGCGTAGGGGGC-GGGAGCTCCGCCACAGCCCGTGGTGGG-CACTGAGGTCTGTC-------GGTCGGTCTGTGCATCCT---GGCACCGTCAGTGG--------CGGGTGACCCGCTGATGGCCTCGGGAGGGGGAGCCGTGGCTGGGCGGAGAGCACGAGCGGCAGCACTGGGTGCGGACGGTGGGCAGCTGGCAGCGGCCCAGTAGGCGCAGTGTCTCACAGAACCCGAAGGACAGGCGGTCCCGCTCACAGCCTGGAGTGGGG-GGTCAGAGAGGCA--------------TCAGAACCAGTGGTTTGGGGTATCCAGAACCTGGCT----------------------------CCCCACCCCAACCACCTCAAGGAGGCTCCAGCAGCTCCCCACCAAGCAGAGAGCCCCAGTTTCTGGAG--CGGCTCCCAAACTGGACTTGCAGGTCTCCAACTGTTGGTGTCTCTGTCCCACCTACTCACGGCCGACCCCAGGACTCGAGAACGGGCGCTGCTGGG-CTGAGGTTTCTGGAGGAAAGGTCCTGAGACCGCACCCTG-ACCCCCTCACATGCCTGTTAAAGAGCCTGCCCAGGGCGACG----CCCTGCCATCCCATCTCCATCCTTGCTCACCCCTGGTGTTCCCCGACAGATCCTGGCACAGAACTGCGGTCCCGGGGCCTC-----CTGCCAACCTGCAGCGGCCTCTGCCCCCGACTCCCGCCACCGCCCCCTGCCCCA-GTGCATCTGTCCTGCCAGACCTCCGTGACCACCTCCAGCCACAGGGGCTGTACACAGCCTC s mm7.chr9 33999020 1275 - 123828236 TCTATTTCTGTGAAACACAGGTCTCTGAGGACC------------TTCATGGAAGA-TAGCAGGCAGAGGTGAAGAATGATCAGGGACATTGAACAGGACTCCCTGGATCTCTTGCCAACCTGTACCTCCTGC---AAAGACCTTCCTGCTCATACCATGTAACCCTCTGGGGATACCGCTTCCCTAGAAGCCACCTCCACCGCCTTCAAGACCTTGCGTGTCTACATTAGGC----TGCTTTTCATGGCCTCTGTGCTGGTTATGCTG----------ATTTGCCCCCAAAGAAACAG---AGAAGCTGCTGACTGCTCTGACTTCCAACAGGGGACAGGGTAGTAGCCATTTGACAAGAGGTGGGTAGGGCGGGG------TCACATTGGAGAGTCTCCAGATCCAAAGACAAGGCCAAACCA--CTCTGAAAGGGTAGATACTCATTTATGTAAAATAATAACAAATGT---GCAAACTGTTAGAATAAAAAAATACCTTTTCTGAAAGGAAAGGGGGTCCCCAGCCTGCCACCGTGCAG--GGGTGGGGTTAGCACCGTTAGGGCACGAGGAGCAGGGGGCTCCACCGCAGCCTGTGGTGGGGCACTGAGGTCTGTGTGTCAAGGGTCAGTCTGTGCATTCTAATGGTGCCTTCCTCGGTTTACCGTCTGGCTACCCGCTGATGGCCTCGGGAAGGGACACCACGACTGAGTGGGGGACATGAACGGCAGCACTGAGCGCGGATGGTGGGCAGCTGGCAGCGGCCCAGCAGGCGCAGCGTCTCACAGAAATTGAAGGACAGGCGATCCCGCTCACAACCTGGGATGGGAAGGGAAGAGAGGAGAGGAGGTGCAGTGGTCAGAATCAGTGGGC-ATGGCCTCCAGAACCACACTTTGTCACCCCGTGATTCAACTGAAAAGCCCCTTTCCCTATTGCCTTAGGAAGAAT--AGCA-------ACCAACAAGAAA--CTGGGTTTCTGAAGGATAGCCCCAGAATCAGAACCCCAGGTCCCCAGCTCTTG---TCCCTGCCTCACCTGC-----------CCTTGAACT-----ACTGACAGTGTTGGGACTTAGCTTTCTGGAAGAAAAGTTCAAAGACCCCATCCTTTACCACCTCAGAAGA-TACCCAAGAGCCTACTGGCAGCGATGTAAACCTCTCGGCCCCATCTTTCTCCCTGCTCACCCCTGGTA---CTGGACAGGATCAGGCCCACCACT----TGTCAGTGTGTCAGACACTGTTAATATGCA------TCCACTCTACAGTCT-GCCACCTCCATTGGTCCCACATGCCTTTG--CTGTCATCACTGC---CCCACCCCCATACACA-------CACACACCCTC a score=20524 s hg17.chr15_random 503975 1196 + 784346 CAGGCCAGCCTCCCACTTCCCAGGTGGGCCAGGAAGCCTAGAGAGAGTG----------GGCCCTACAGGCTGTCAGCGGAAACCAGGGACTAAGCCCAGGCCCAGTGGGGAGGG---------AGGCCGGCTGCAGGCTGTGGTTGTCA-GGGCTGAGGCTTGGCTGGGCCCTCCTGCCCCGTGGTTATCAGAGCTATTTTGGGAAGTGGCTTGTCTCCAGCCTCCTGGCCTTGCTCCTGATGCCACTGCC-----------ACTGCTGACAGCCCCCACCTGCCGCCTGGGCCCTGCTTACTCCAGCAGACCTCCCTGGGGAGGAAGAGCAGGAGGACAGCAGCCAGCCCTGTGCCAGGGACATCCCTCAGGCCCGGCAGAGGGCACGAGGCAGCAGGCAGGCTCCTCCACCCCAGC-TCcaggcag-agctccaaagtgcacatctgcaggcctgcatcctggtcgcccggggtgacctcagacaagctgcttcacctcttgggccttggttccctcctctgtcaaC----CCCACCTCCACAGCAAATGG-ATGTGGCC--------ATGCTGTGTCACTGCAGCGACCGCACACTCTGGAGTTTCCTGGCTTTCCCC-CGTCCCGCC-AACTGTCCCACAGACCAGCAAAACATCCTGGGAATTCCAGGT-CTCAAAGTCCAAGACACCTTCCCAGCTG--CCCCTCCACT-----------------------GTTCACTGGTGGCA---GAAAACTCCTCACTTAGGACAGCTTCTAGTTCAGCCACCTAACCAGCCCCCATAGCCCACTCCCTGCAGCCCATTCATACCCGCCCCTGGGAGACCTTACAAGCCCAGAGCCTCCTGGGCCATCTGTCCTTGGTTCTAGGCCCCCAGGGGCCTCAGTTCCTGTTCTCTGCTCCATCTGGTCCTCATCCCCTGGGATCATAACCACCCCACTCCCTGTGGCCAGCTCT-----------------------------------------AGCCATGAAGGCGAGAGATGTGATGCCAGCACCCAGCTCAGGCAGCACACAGGAGTG-CTCTGAGATGCTGGCTGGGTGCGTGCTGAGGGCAGGCAGGACAGGGTGGGGGCACTGCCACTTGGCCTTGAGGTAATGGGGTTTGTGGCAGGAAGGCCACCCCTGCCAGAGGCAGGGTAGCAAGGCATGGCAGCGAGGCATGGCAGGGGCCACTCTGAGCCCAAATGAGGGCTGCCCAGGAGCCAGC-GCAGGTAGAGAAGGCGCATTGGATAAGGGGAGAAGGCAGACTGGGG s mm7.chr9 34000337 1171 - 123828236 CAGGACAGCCT---ATTTT---GTTGGGTGGtgaagcccagaaagttggacttggccaaggccacagagatcatcagtaggaaccaaagcctgggtcaggcccctggtGGCAGGGCACAGGGAAGGGAGAGTCGTCAGCCCTAGTTGTCACAATCTGAGGCCTGGCTGG------CTCTCCCGGG------AAGACTATTTTGGAAAGTGGCTTGCGTCCAGACCCTTGGCCTTCCTCCCAGTGCTACTGCTTTGCTGTTGCTGCTGCTGAAG--CCACAGCTGCC--CAGACCCCTGCTTACTTCTGCAGAT-TCCCTAGGGAGGAAGCACAGGAGGGCAGCTGTGGGCCCTG-GTCTGGGACATCCC-CAGGTGCAGCGGAGGGAACAAGACAGCAGACAAGCCCCTCCACCCTATCCTTTCGGCAGCAACTCCAAACTG---------------ACACACTAGTTCCCCTGGGTGACCTCCAGCAGACCTAAGCAC----TGAGTGAAGGTTTCCTCTT--GATAACAGCCCCCACCTCCCTGGGGAAGGTCACATGACCCGGCATGTGAGCTGCCTTGCCACGGTGATCACACACCCTGGAGTTTCCAGGATTTCCAAATGTCCTGTTGAACAATCCCACAAACCATCAAAACATCCTGGAAGCTCCAGGAACTTGCGATCCTAGAGTCTTCCCTGATTGGCTCCCTTTACTTGAGAGGGGGAGGGTGCTGGGAAGGCGGGTAGGGGCACAGGGAGGCCCTTCACAT-GGATAGGCTTTGGGTC--------------CCTGCTAAGCCCACCCTT-----CCCATTC--------CTCTTGGAGACCTTGCAAACCCACAGCCTCCTGAGCCACGCTATTTCGGAT-----------AGAGCCTGAATTCCTGCCCTCT-CCCTATCTG-----CACCACCTGGGACCATAGCTACCGTATTCTCTG---CCAACCCTGAGCTTGACGAGAGAAACAGAAGAGAGCCATAGACATTATCAGCCCCAAAGGCAAGCACTGTGGTAT-AGCACCCAGCTTAG-CTGTGC---TGAGTGTCTGTGGGAAAAATGGAAGGAG-ATGATGAGAGAGAAACAGGCAGGGATGGCTTAACATCTCCCCGGCATGAGGCAATGGGATT------------------------------------------CAGAGCAGAATGGCAGAGCAGAAGTTGCTCTGGTCCTGAGCCAGTACCACC-AGGAACCAGCTGCTGGTAGTGAAGGCT--GTGCAGAGCAGGGAGAAGCAGATCGGGG a score=82469 s hg17.chr15_random 505220 4078 + 784346 CTGTCCTAGGGTCAGGGGGCAGACAGCCAATAGCACAGGGGCC--GCAGCTCTTCAGGCCACAGCTCCTGGATTCCTTAGACTGGCA-GGGTCAGCCCCAGGCCCTCTCCCTGACCTTGCAATGGGGGATGACAGTGGCTTT---------GCGGGAGGGGAAAAAGCCGCCTTCCCTGAGCACCACCTGGATCCCCACGCAGTGCTGTGCCCTTCATGCCCAGACCTCACTTAtgcaaggatggggcttggcagcccctttattca---gcacatgaaggccctgagagggaaatggagcccaaggccacacagctggtgaggggagcccaggtgacactccagggccaccccatttcctgccctcAGCACTGCTGAGAGCAGCTGGGGCTGCAGGAAgtgtgtgagtgtgtgtgtgtgtgtgtTGGAGGTGGGGGGTTGGGATATCCAGAACCACCTCTAGCTCAGGCCCTTCCACCAG---GACCCAGCTGGCCAGGAAACCCCCCACCACTGGGATTAGCAGGACCCTGGAAGGGAGGCCCTTCCTGTGGTTCCATTGCTCACTCTAGGCAGTCCTCTGGCCAGGGAATGGACAGgctagggctggggaggggacagggactcacccaggcccagttttcacacagcttcagggacatccctggtctcactatgggaagactgagacccagaggggaaagagcttacccaggttcacacagc--aaatcaggggccaagGCCACTCCCTCTACTCACCGGAGGTCAGAAAGCTGCCTGCGGGATG-TTGTGTAGCTGGGACTTCTCTTGACTGACTCCCAGCACAGCCAAGCCTCCAGCATGGGATCCTGTGGCATCAGGAT-----TTTCAGTGGCTCCTGAGCCCAGACTACAGATGGAGCCAGCCGGTGCCGTGGGTGCAATGGTTTGAAGACCCAATTTCCCCATCACCCTTCCCGCCCCACCTCACTTCAGCAGAGAGCTTGGGGTCGGGGGACTCACGGGGAGGCTCGACGGGCTCACAATCCTCGGTGCCACACAGCCGGGAGCTCACAAGGCCAGGCCTCGTGGCCACACTGGTCACTGTCTTCCTCGGGTAGCCCCGTCTGGGTGTTGACACACTTGACCAGTGTGTGACCACTGGATGCCACCACCACAGGGGCCTGAGCACTGGGGGGAGCAGGGGAGGAATGAGTGTCTCCAGGGCCAGCCCTAGCAGTGGGGG----------------CAGGGACACCTCCTCTGGGAAGCCGTCCCTGCGCCCTGTGCCTGACTGGCCTGCCCTTGCTCCCAGCCGCCCTCTCAGTGCCTCCTGGAGGACCTGTTCCCATTCCTAGAGCCCACTTGGTGCTGGAACCCCACTCTCACTTGTGGGATCGGCTGCTGCAGAGGGAAGGGGCATGAGAACCATGGGACAGCCCTTGGGGCGGCAGGGCAGTGAGCCCCTCACACGGGACATGACTGAGAGGCCTGGGCAGGGGCCCCGGGATGGAGCCCTGATGCAGCAGTGAGCAGAGACGTGGGCGAGACACCGCTGTGCCCGAGGGACAGGGCAGAGGACCTGCCGCAGCCCATGGGCAGGAGGGGTGGAGACAATTTCACAGCCGGGG-CCCAGCCC---GCCAGGCTTTGTTGTTAACAGGTGCAGGTCTGAAAGCCCTAAACATgtgctgagtctgtgccagtgtcgtgctgtgcccggccctgtgctttgttgcgttcctccatttaatcctcctgaccctcctctcccaaagc-gtcccaattttacagatgag------aaaactgacccagcaaagcaaagcaacctgcccagagtcactcagcagccagtcggacagactcaaacgctggcccagctgactcccggacccagctcAGGGCCCAAATCTGAGATTTCTGAACCCCTCAGTTCCAAACAGGCCCAGCAG-AAGGTGTCCTGCCC-------------------Atacgaggcccctcttctgcccccttctgccgc--tggcctttgctgggctccctgatctccccaagctcatcattcctgcctcagacttcacacctgctgtcccctcgatccctgtccttggcatcactgactcctccctcgggtctcaacccca-gacccctcctcggaaggccttccctgacatcacagCACACATGCCCtttccttgtctgtttctccctgtcaggtgtgagcaccagcatggcagggctttgtccagtgactgctgcatgtgcaggggccacagacagcctggctcacagcacacactccacaGCTCCTTCACCCAA-CCCAGGACTGACCAGGCGCTACCAAGCAC---TTGCTCCCTGCTCCCCCCC----GCAGCCTGGCTCACCTGGCCCCAGGGCCCCACCACCCACTGTGTGCAGGGGTGGGTGTTGCAGGGCCGGGTGGTGTTGGGTCTCAGTGCCTCCTCGCAGAGGTCTGGCTCTGGGCAGGTCACCAGACGCTGCTGCTCACCACCGCCACAGGCCTCGGAGCACTGGGTGGGCAGGGAAGGAGTCAGGGCACAGCCAGGGTCTGAGGGTGTCCCC--TCCCCCCAACTCAACGCCCAGGCCTCACCTCCCTCCAGGAAGACATGTACCAGCTGAGGCAGGGCTGGGCCCCGCAGGGCCAGTGCACAGGCAGCTTGGCAGGTCCAGGCTGACAATGGAAGGGCCACAGTGGCCAGAGGGCCCATGTGTCCACATGCTGCATGTCCCACACTGAGGAACCTCTGCCACAGCTGTGGGAGCACTGGGGACCGAGAGAC--TTGTGTGGACACATCCC---CACGTGCAGGCCCACAGGCGTGACCCCGTGAGGCGTGTGGCAGGA--AAGGCATCAGACCCACGCCCCAGCCGGGGGCAAATCCCTGAAGAGCCCCAGCGAGAGGCCAAGGCTGGCAGGCCCCAGG--CAAAA--GGTGGCATGGCCAGGGGCTGCCATGGGCTGGGACAGACAGAGAAAGGGAGGAACAAGTCCAGATGGGGTCAAAGATACAGAGGAAAGG-----AGACAGGCCAAGCCAGACAAAGATGA--GATGACTCCCAAGAGATTCGGAATCCGGTGCGATCAGGCACATAGACATGCAGCCTGGAGCCCTCCCCTTCCCTGCCGCTCTCGGAACACAGGCCGTGGGGAACCAGGGCTCCACCCCATGCCCTGGGGATGCCTGTCCTGGCTCCATCCTCATGCACCTTACTCCAGTTGCCTGAGTGCCAGGTGGCACAGGGCCACAGGTGGCAGCGGCGGGCAGGCTGGGGCCGGCCAGCGGGGTCGCAGTCCTCATCCCGGCTGGAGCTACAGCACACCGGCCTCCAGAGGGCACCCAGGCCACAGGTGGTGGAGCACTGCGGGGCACAGACCCGTGAAAGCCAGGCAGAGCCCATCCTCGCCAGGCCTCCACAGCCAGGAAACTACccacctaggctagcaagacctcagcaagacaggggccctcttctgggcctcagtttccttatttgcaaaataggctcctccacccacctcccaggaagaccatgagaatgaaaAGTCAAATCCCCCCAGCAACCAGCCGTCCCTGCTCACATGGGACAAAGGGCCTGTGTGCCAGTGTCATTGGTGCAGAGGTTCGGGGGAGGAGACCCTGTGGGCACCCCTGACCAGCTATCCTGACCAGCCTCGTCGCTTCCCAGAGGCACCAGGGAAGGAAGGCTGGGTCCTGGTACCAGCAGCCAAATCGCTGCCTATCCCCGCGCAAAACAAGCCCTGTGGGCCTCAGCCTGCCCCTTCCCACCCCAAAATTAGGAATCTGAACAGAAGCTTGCTTCTCCTGCAGTGACCATCTGGGGACCCAGGGAGGGGGCACTAGCCAGCTTCTTTC-ATGCAGCTCAGACGTCTGC-AGGTCACTGCCAAAGGAGGGTGGAGCCACTGAGGGCAGAGCCAGGTAGCAGTGGGCTGAGTCCAGCCTGGAGGAGCCAGACAGAGCCTCAGGGAAGCTGCTG------CCTGCTGGGCAGGACTGGGCCTGGTGGCCAC--ACAGGGACCCTCCCCACT-GCACAGCTGTCTGAGCCAG----CTCCATCCTGGGGCATGCTGTGCTGCCAGAG---------TGTGCCTGCCC------CTGCCTTCCCTGAGGCCCCC----TGTGCTGCCCAGGAATGG s mm7.chr9 34001526 3448 - 123828236 CTGTCCTGGGGACAGGTG-CATAGAACCAGTAG-GTAAATGCCAAGCA--------------AGCTCTTAGGTTCCCTCAGGTGTCAAGGGGTGGCCTCAGAC--TCCCCATGCCTTTGCAATGGAAGACAGTAATGGCTGCCAAAAATGGGAGGGAGGGGGTAAAGCGGCCTAGCCT---------------TCACGGGCAATACTGAGCCTTTCACCGGTAGACCCCACTAATACAAGAATAAGGATTGACCATCCCTTTATGCATGAGGAAATGACAATCCAGATAGAGAAACAGAGCCCGAGAC---------------AGGTACCCAGGTGTGACTCAAGGGCCACACAGTTTCCTGTGTTCGGCACTGCTGGGGACAGCTGGAGCTTCAGGAAG---------------------------GAGGTG----------ATTTCCAGAGCTACCTCTGGCTCAGACCTTTCCTCCATAATGGCCCAGCTGGCCAGGAAACACAGCA------GAAGCAACACCACCCTGGGAAAGAG-TCCTTCCTGTGGC-CCACTGCCACCTCTGGACAGTTATCCT-CCTAGGAATAGGCAG------------------------------------------TGCCCACAGCC-CAAGGACATCTCC--CTTCACTGTGGG--GACTAAGACCCCAAGGGAGAAAAGCTTGCC---------ACTGCTGGAGTCAGGAG--------GCTCCTTCCACTTCCCGAGGCTACCAAAGCTGCCTACAGGATGCTTGAATCTTTGGGATTCCCCTTGGCTGAGTCCCAGTTTAG---GACCT------TGGCACCCTGTGGCCTCCCAGTGACGGTGACCATGGGGTTTGAGCC--AACTGTAAACAA---CAGCAGCTGTTCTAGGACCGACGATT------CTCTAGTTCCTAGCCATCCTCCCC---TTATCCCACCATCCCTAAGAGTAAGGAGAC-----ACTCACGTGGGGGTTCAACCAGTTCACAGTCCTCAGTGGCACATGGCCGTGAGCTCTCA-GGCCACGCCTCATGGCTACACAGGTCACTGTCTTCCTCTGCCAAGCCGGTCTGAGTGTTCACACATCTGACCAGAC----GCCGCTGAACACCACCACCGCAGGGGGCTGAGCACTGCATAGGA---GAGAGGAGAGAACGTCTCCAGGACCAGCCATCACAGTCGGGGACTGCCCATCACTGGACAGTACCACCCTCTCCAGGAAGCCATCCCTGA----------------------------------------------------CTAGAG--------------CCTAGTGCTGACCT----------CCCCACTGTCACTGGGGGTATCTGTTCTTGCAATGAG----GGCAAGATACAAGTAAGA--------GGAGATGCGAAACA----------CACACAGGAT-----------GCCTGCACAG----------------------------AGAAGGCAGACCCTGAGATGAGGCACCATGGTACCCATGAGACA---CAGAAGGTGTG--GCTACC-------AGCAGAGAGAGAAAGCGTGTCTCAGGTGTGGTCCCCACCCTGAGTCAGCCT-----GTTCTCAGGT---------------------------TTAATCTCTGCTGGCACAATACAGGCTCTGCCGTTCAGATTTGTC-------------------------CACTCCTCGCTCCATGCTGcccccaatttaaagatgaagggggaaaaaacagcccagcaaggcaaagca-cctgcccagagtcattcagcagccagtgggtca---------------------------------------agcacccaa---tgagcttcttgaaccagtcagcacccagtaggctcagcAGCAAGctgccctgccctgccctgccctgccctgccctgTGGGGcctctctact---cccttctgccagagcggtctttgctccattccctgaacaccccg------tcattcctgcctcaggctcggcacttgctgttctctttatccctcactttagcatcactgacgcct---ttagatgtcaacccaaagtcctctcctcagaggactttccccg----catggc-----cactttTCCTCTATCTGATATTCCCTGGCAA-----AGTACAAG--------GACTTGATCAGGGCACAACTGAATATTTAGTGGCCCCAGA--GACCAGCACACATCACACAC--AACAACTCATCCTTCTAAGCCCAAG---GACCAGGGTCTATCTGCCAAGGGTTGCTGCCAATTCCTCCCCACAAGCAACCCTGCTCACCTGACCCCAGGGCCCTACCACCCACTGTGTGCAGGGGTGGGTGTTGCAGGGCCTGCTGTTGTTGGGTCTCAGCGACTCCTCACAGAGCCCTGGCTCTGGACATGTCACCAGTCGCTGCTGTTCACCACCACCACAAGCCTCGGAACACTGGAAGAACAAAGA-GGCATCAAG-TATAGCCGGGGTCCAAGGGTGTCCTCAGTCCCCACTTCCCCAGGCCCAAACCTCACCTCTCTCCAGGAGGAGGTGTACCAGGGGAGGCAGGGCTGGGTCCCACAGAGCTGACGGTTGGGTGGCTTGGTAGGCCCGGGCTGGCAGTGAAAGGGCCGCAGTGGCCGGAGGTCCCGTGTATCCACACACTGTACATCCCTTGTAGAGGAACCTCCACCACAGTTTCGAGAGCACTGGAGTGCAAAGAATAGTCACATAGAGACATTCTATGCACATGAATGC-----AACATGAT---GTTTATCATACAGCAGGGTTAAACCTTCTGGCCTAGACCAAAG---------AGTCCCAGTAGA-CTTCAACACCAGG-------TGGCAAACCCAGGGGACAAAACAGATGGAATTACTAGGG-------TGAGCTGGTAAGAAGAGTCCAATGGTGGG------------TGGTTCGAA--CACAGAGGAAGTACAGCAACGCAAGCAGGGCCAGGCCATGCTGAATGAAGATCTCCAAGAGGGATGAGAACAGGACCGGATCAGAGTACAGAC-TGTGGCATGATATTC-ACCCTGCCCTGCTGGTCTTCAAATCACAGCCACAGG-ATCCAGGGCTCCC----------------TGCTT---------------------ACCTTACTCCAGTTGCCCGTGCGCCAGGCAGCACAGGGCCTCAGATGACAATGGCGGGCAGGCTGGGGACGGCTAGCGAGGGTGCAGTCCTCGTCATTGCCAGAGCTGCAGCTCACTAGCCTCCAGATGGCGCCCAGGCCACAGGTGGTGGAACACTGTGGACCATAGATAC-TGTAAGCCCAGCAG--CCCACCC---------------------------ACCCACC---------AGCACCTCAA----------ACCCGC----------CAGCATCTTTATCTGCAAGACAGACTCCTCCCCCCACCTCCCGAGAAGACTGTGAAAGAAAAAAGTCAAATGTCACCAGCAGTTAACTATCTCTGCTCCCA--------AGGGCCCGC------------TTGG-----------------------------------CCCACCTACCTACCCTG-CCATCCT-GTGGCTTCTCA------CCAGGGAAGT----CGGGGCCCTAATCCACGCAGT-------------------GAGTGAAATGGG---TAGGAATGTCATCCTGCCTCTCTCCCCAC--------AGACTATGGAC------------CTCTTACAATGACAATTT--------AGAGAAGGAGAACTGGTCATCTCTTTCCCATACAACCCAGACTATTATGAGATCCCTAACAAAAGCGGG----GACTTTGAAGG---------GTGACAATGG-TTGAAAC--ATCTGGAGGAGTCATACTGTGCCTCAGCTATAC--CTGTCCGACCCTCCCAGGCAGCACTGGGTGTGGGAGCCATGGAAAGAGGCCTTCCTTACCCATACAGCTAGCTAAGGTATGATTCCCATTGCTGGGGCATGTAGGCCAGTCTGAGCACTTGATTTGTAGCAGCTTGATTTGCTGCTTTC--TGAAGCCTTCCTTCTGTGTGGCCTAGGAATGG a score=101438 s hg17.chr15_random 509298 2934 + 784346 GCCCCAGGTCCCC-------TCATTCCCCTAATCCTGGGAACC-------CCCGCCCCAAGGAAGGCGAGACAGACGGCGCCTGCGTCCCACTCTGCTCATTTTCAGATGAGGAAATAGTCACCAAGGTCCTGCGCAAAC-TCCCTGCCCGCCCAG--CCCACACCACTTGCCTCGCTCCAGTTTCCCACTTGTCAGCCGGCGTTCCTGACAACCAACGGGTCCGTGGGGGGCCCCGCTTCAGCCAGGCTGGGAGGCAGTGGCTGGGTCTCAGGGGCTCTGTGGCTGTTGGCGGGGCTGTCCCAAGCTGGCATGGACAGCAGCCTAGAGCTCAGGGGCACCTCAGGGCTGAGGGACTCAGGCTGACCCTTGGGTCCTGGGTTCAGGGCAGGCTCAGGCGTGTGCCCGAGGCCAGTCAGGGTTGTGGGGAGGAAGGTCCCCCACACTGCCACAGTCTGCAGGTCCCATGAGCCTGGTCCTGGGGTTGGGAAGGTGGAAGTCCCCGGCTGCAGGGGACTGTCCTTGCCCTTCATCTCTGGCAAAGGGGCTATGGGAGGAGGAGGGAGAGAAGCCACCCTAACAGTGGGCCACAGTTCACTGTCCACAGGCCCCAGGCCACCCTCCAGAGCTGACTCCCAGGCTACTGTCCCTCCTGTCCACAGCTCCGCCACGTCAGGACTAGGAGAGGAGTGGGTGCTGCTGACCGGGTACAAAGTGGGCAGCGTGGGGCTGGGTCTCGGGGGCAGGTGGGGTGCTCCGCAGCCCTTGGGTCCCTCATCATTTGAAAACCTCGTTGGTCCTGTCCTGCCATGGAGAGGGCAGCTGGCTCTGGCTGTCCTTGCCAACTGGGAAATCATTTTGGCTCTCAGGGGCGGCAGGCGTCTGCAGGCCATCAGTGGAAACCCTGGGCCAGGGCAGGCTGGGGAGCCCAAGATCTGGGGCCCCTATGGGGGTGTCTTCCTCAGGCAGGAAATTGATCAAAGGGTTCCCAGGGGTCTGCTCTGAGGGTGGGGGTGGGGAGCGGCCGGCCTGGCTAGGCCAAGGGCTCGGGGACCAAGGTCCCGTTGCCCCTTCCTCCTTGGCTGCAGGAGGCTCTGTGGCAGGCACAGGGCTACCCGTGGAGGGCGCAGCAGGACGGCTGTGTGGTGGGGGCGTCCGATCCCCTGTCCCCGCCAGGTCTAGATCAGGCTCCTCAGAAGGCCCGTAAGGACAGATCCTCGTGGAAGCTGATGAAATTGTAGTCGTAGTAGAAGTCGTCCACAAACACGGGCCCCGGCAGGTCCAGCTTTGGAGCCTCCTCCTCAATGGCGTTGCCCATGGTGCCTGGCTTGGGTGATGAGGCGGGTGAAGGGCGTGGGGCCAGGTGGCGCGGGATGAAGTCAGCCTCGTTGAAGAGCTCGTGGCTGGAGGAGCCGCTGCCTGAGCCTTCAGGGCCCAGTGTGTCCAGGGGCCACCAACAGGGTGGCAGAGAGCAGGTGACTTCGCTGGCTGGCTGCTGGGCCTCGTCACAGGGGACACCGGTGTCACTGATGCAGAGGACATTTCGGTGCTGAGTCCCTTCCTCATATGTCACTGAGCACTGCAGGGGAAGCCAGGGTGAGGGGCTTAGCCTGGGAGGCAGGCTGCCAGGGGACGCTGGGGCAAGGCTGGGTAACCTGTCCACTGCCTGATGTCAGAGTGGCAGAGACCCCAGCCAGCCCTCTCTGGCCCTTCCCAGCTCAAGGCCATGAC-TGTGGCCAT-GCTTGCCAGGGGCTTCCTGATCCCTGAGGCTTTAGAGTCAGGGGCTGGACCCTGGAATGCCC---AGGTTCCCTCCCAC-------------CCACAAGGTCTCCAGGAAGGCTGTCTGCCTCCCTGTAGCTGAAGACCAAGGGTGGGGCTGGAGGCGGGCACCTTCCCA-TCCCACACTCACCTGAGACCAGTTCCCCACAGCCTACGTGGCCGGACAGGGCACATGGTGGTTGCAAGGGGTTTCAGTAGGGGGCCGGGGAAGGTGTTCACAGGCGGGTGGCTTCAGGGCGCTCTGCTCATCCAGCCCCACGCTGCGGATGCAGAGCACAGCCTGGCAGGAGAGGCCCCCAGGCCCGCAGGAGCTGGAGCACAGCTGCCACTCACCTGCCCACCACCTGCTGAGGGCACACAGGTGTCATCAGTATGGCATCAGACAGGTGGCATTGAC-AGGCTCACCAGCAGGGAGGGCCAGGC----TGGGTTTCCAGGCCCTCGGGGTTTGGGCAGTGCCAGAAGCCAGTGGATGATTCTCCAGAGCTCCAAG-CTCAGGTAAGTGTCCTGCCCTCAAAGTCTGGTGACAAGGCACAGCCCCTCCACTCCTGCCA-----CCTTCCCCTCAGGGAAACTGAGCATGACCTGAGGCCTATTTCCACATCCAGGGACCCAAAGAGGAG-GACCATAGGTGTCCAGGCTGGCCCAGGCTGGGGTGAGAGGTGA---CCGG----GGGTTGGGGCTTCAGCCTTGGGAAGAGAATGAAAGCCCGGCTCCCTCTGCTCCTCCCTGGGGCCTCTGGGGACC-CAGATGTAGGGGCCTGTGGCAGACCCAGGATGCCTGGGGGTGGGGAGT-TGGTAGGGGATGGGGGCGGGCTCACCTGGCAGGGCAGGGCTGCTGGCTGCACTTCCTCTGGCAGTCATCGGGCCGGCCCAGGGGGTCACAGTGCTCCTCGTCCACGGGCCCTGCCTGCCGCTCCGAGCAGTACACACTCTGCCTCTGCACACCTAGGGGCCATGGCG--TTCAGCCTGGGACTGGCACCCAGGTGCCCACCGCCCAAGACCCAAAGACACCCTCTCTGCCAGAACCCTCCCAGAACAGCGCCTTACTGCCCATGTCAGGATGCCTTACTGCCCATGTCAGGATGAAGGCAGACCTCCACCGTCGCCTCCTTGCTGTCCTCCTGGTTCTCACCC----ACCCCCTCTCCTATGTAGCTTCCCCTCTGACTGCCCCTGGAGGGGTGGC s mm7.chr9 34005089 2795 - 123828236 GCCTCAGCCCATCATGGCTGTCAGTTGGCTCATCCCAGGAACCGTTACGCCACTCTCCAAGGATGA----ACAG-----GGCTGTGTCTTGCTCTGCTCA------------AAACTGAGTCGCAGGGTCCTGCTCAAACGTTCCCACCATCCCTGGCTCTACACAACTCACCTGGCTCCAGTTTCCTACTTGCCAGCTGGCATTCCTGGCAGGCAGTGGATCTGCGGGGTCACCATCCTCCTCTAGGCTGGGCTGCAAAGGCTGGACCTCGGGGTCCTTGCTACTGTTAGTTTGAGTCTCCCGAGCTGGTGTAGGCAGCAACCCAGGGCTCTGGGTTCCCTCAAGGTTAGGGGTCTGTGGCTGGCCCGATGGTCCCGGGCTC---------------------CTCAGGTCAGTTGGTACTGTCAAAAGCAAGGTCCCAGGCATTGTCAGAGTTTTTAGGTGCTGTGAGCTCAGTTCTGGGCTGGAAAAGGTAGGCGTTCCTGGTTCAAGAGGGCTGTCCCTGCCCCAGATGCCTGGCACAGTGGCCATGGGAAGAAGTGGAGGAGAAGCCACCTCCACAGTGGACGGCAGCTCACCGTGTCCGGGCTTCAGGTCAGCCTCTAGCACAGGGTCCCAGGCCGCATTCCATCCTGTCGACACCTCCACCACATCAGGACTCGGAGAAGCTTGGGTAGGACTGATGGAGGGTGGAGAGGGCTGTGTGGGGATAGGGCTTTGGGGCAGGGCAGGGGATGTATGACCCAAGGGGTTACCATCTGTAGAAAGT----TTGTTCCTATCAGACCATGGAGTGGATGGTGGGCTCTGCTCATCTTCTTTCACTAGCAACTCATCAGGGTTTCCAGGGCCAACAGGTGTCATCATATCATCAACTGAAGCAGGGGGCCAGGGCAAGCTGGGGAATCCAAGTTCAGGGGCCCCCATGGGAGTATCTTCCTCAGTCAAGAAATTGGCCAGGGGGTTGATGGAGGTCTGCTCTAATCCTGG---TGGGGAATAGCTAGCCTCACTGAGTAAGGGGCTAGGAGACCAAGATCCCTGAATGTCTTCTGCCTCAGCTCCAAGAGCCCCTGCAGTAGGTACTGGGGTATCTGAGGGAGATTCAGTGGGTCTGATGTGAGGTGGTGCTGTCCAACCCCCATTATCAACCAGGTCTGGATGGGGTTCTTCAAAGGACCCATA-GGACAGGTCTTCATGGAAGTTAATGAAATTGTAGTCATAATAGAAATCATCCACAAACACGGGCCCTGGCGGATCTAGTT------CCTCCTCATCAATAGCGTTGCTGATGCTGACCGGCTTGGGTGAGGATGCTGGGGAAGGTCGTGGGGCCAGCTGGTTCGGGATGAAGTCAACCTCATTGAAGAGCTCGGGGCTGGAGGAGCCGCTTCCAGAGGCACCTGTGTCCACTATGTACATGGGATACTGGCAGGGTTGCAGAAAACAAAAGGTCTCAGTTATTGGTCGCTCAGCTTCATCACAGGGGACATCAGTGTTGTTGATGCAGAGGACACTTCGTTGCCGAATGCCAGCTCCACATGTCACAGAGCACTGCAAAGGAGGTCA-------CAGCTCAGGCCAAGATG-GGGCTTCT-GGGAAAGCTGGGGCACGGTGGCAGAACGTGCCCGCTG-CTGGTGTCTTAGTGACAGAAGTCTCAGACAGCCCTCTATGGCTATGCTCGCCTCAGGATGATAGCTTACAGTCATAGCATGCCAACGAATCCCTGACCCCCAAGGCTCTGAGAACAGTG--TTGTCCCAGGAATGCCCCCTAGGCTCCCTCCCACTTCGGGTACCAAGCAGTAAGGATTCCAGG------------------------------CAATGGTAGTACCAGAGGCAGGTCCCCTTTCACTTCTACACTTACCTGAGACCAGTTCCCCACACCCCAAGTGGAAGGACAGATTACATGACGGTTGCACGGGGTTTCAGCCAGGGGACGGGGAAGATGTTCGCAGGCAGATAGCTCAAGAGCACGCTGCTCATCCAGCCCCATACTACGTATGCAGAACACAGCCCGGCGAGAGAGGCCTTCGGGCCCGCAGGATCGGGAACATGGCTGCCACTCCCCTGCCCACCACCTGGTAAGCGGTAACAGG----------GTGACATGA-ACACCTATCATGAGCAAGGTTCACGAGCAAAGATGCCCATGCCATACAAGGCTCCAGGCCAATGGGGTGCAGACAA-ACCTGAA--TGGAGGA-GAAACCCCAGCAAGCCAAGTCCCAAGTCAGTGCCCTGCCCCTGAAACCCAGTGGCAGAGC----CCTCTTCACTACCACCAACAACCCTTACCCCCTGGGA-------CCTGGCCAAGG-----------TATCCAGAGATCCAAAGACAAGTTATCAGGGGCATCTAGGCTGGT-----ATGGGGTGCCCAGTGCACTCCAGAAACAAGCTAGGTCCATGGACTTGGGAAAAG-----AAGCC--ACTTTCTCTTCTCCT-----GAGCTACCAGGGTCTGCAGAGGCAGGAG-------------CAGGATGCCTAGGAATTGGAGGTCTGGTTGGGGAC---AGTAAGCTCACCTGGGGGGACAGGGCTCCTCACTGCATTTTCTCTGGCGTTCATCGGGCCGATTTAGAGTGTTACAGTATTCCTCAGCAACAACCCCAGCCTGCCTCTCCATGCAGTATAAGCTCTGCCTCTGCACGCCTGGAAGCCACGGGGAATTCAGCCTGGGCCCGGCACCAGAATGCCC----CAAGAGACATACACACAACCTCTCTG-CAGAGACCTCACAAAACAG----------------------GGTTCCACTGCCTCTGTCAGGGTGAAGGCAGGCCTCCA---TAGCCTCCT--CTGTCCTCCCAGCCTTCCCTCCGTGACACCCTATACTGTA-GGTGGCCCACCTTGCTGCTTCT-TAGTGGTGGC a score=7590 s hg17.chr15_random 512662 138 + 784346 GATTGGCTTGGGTGATGAGGCGGGTGAAGGGCATGGGGCCAGGTGGCGCAGGATGAAGTCAGCCTCACTGAAGAGCTCATGGCTAGAGGAGCCGCTGCCTGAGCCTTCAGGGCCCAGTGTGTCCAGGGACCACTGACA s mm7.chr9 34006353 138 - 123828236 GACCGGCTTGGGTGAGGATGCTGGGGAAGGTCGTGGGGCCAGCTGGTTCGGGATGAAGTCAACCTCATTGAAGAGCTCGGGGCTGGAGGAGCCGCTTCCAGAGGCACCTGTGTCCACTATGTACATGGGATACTGGCA a score=122004 s hg17.chr15_random 514953 5368 + 784346 TCTCACCTCTGCCACAGGTGACTGTACACTTGGTCCAGGGCCCACAGTGCCAGGAGAACTCGGGCGGCGGGACCTCGCCGTGGCCACCTGCCTCCCTGTGGATGGTGTACTCGTAGTGCACCCCAGGGTTGCTCTCCTGGAACAGCAGCTGGG-TGGGCAGGCGGGGGCCCGTGAGCACGAGGTGTCTTCTCCATCCACCCAG-------TCTTAAAGGAGCTGACCCCAGCCACCTCTGTGAACTGCAGCTACACAGTTGGGCCATCTTAAAGATGGGGAAACCGAGGT--------AGAGGCCTCAGCAGGAGGGTCTGGCTCAGAGCCAGGCTCTGTGACTAACCCAGGGCTCACTCCTCCAGGACGAGACCTACCATGGGAGGTGCTGGGCCTGGGGACTCCGCCTCTGCTCCCCACGCCTGGGCCTCGGGAGGCAGGCACCTGGATCCAGACAGGCTCCTTGGTGGGACCCGGGGACGTGAGGTTCTCCCAGTTGCCCCTGCGTGCGTATGTGACGGTGGTCCCTGCCACCTGGTAGTCCCCGTTCTACTGGATGGTCCAGCCACCATTGAGGAAGTACTTCTCCGGGTCCTCGCTCTGCAGTGCCAGGAAGTTGGCAGCCTCAGCCACCTCCTGGATGCGGACCTCACGTGTGCTGGCTGGGATCAGCCCCACGTCCACATACCCTGTCAGGCAAG--------GGTTGTGCCTGGGGTGAGAAGCTTGCTTATCC--CCACCTGCTCCCCTCACATCTCTCCCCACTTGCCTCCGCCTGCTGATGCCAAAGATTT--CGCCATTAGCTTTAAAGTCTGAGCTCCCC--------AAATTGC-----TCGGATCTGTCATGGGTCACCAAAACCTTGCGGAGGTGCCACAAATCCTGACCCCGTGGC-CATGCCCCGTCACTCCTCTCTTGGGGACC-------TAAACTGGTC-TCATCA-TAAGGCTGGATCCATCCCCTACTCTAAGGGCCGGCTGGCATTCTCTTTCTAAAAAAAACCAAAGTGCCCAGGCCTTTCTCC----TGGGACACC------CTCCTCATCC-CCACGCAGCCTGCTTTTATTCATTCACTTCCATCAcacccatcacgtgccgggcactactctcagcacttcacatgtgtaagctcatgggtaatggccctatagcatggtactattgttaaccccattttacagatgagcaaagtgaggcagacagggagagtaacg----tgcatgagcgtcctgctgcaatataagcagcctccagggccagtgctttatccaccacactgcactgcatctctgGGATGAAATCTAAGCTTCTCAGCCTGGCACTCAAGGCCCCATAGCTGGCCCTGCCTTCccttcttgcctccagggctctggcgcaagctctttcctccatttggaatg---cccattccatctcttctgagttttatgattcagctcaacttccgcctcctgcaggaaaccttccctgacttc-----------------cccaggccaggaccttcttcttcagtgctcccacagccctctgggcctccc--tccactgcactgatcacaccagaaggttctgtcccccttcaggactgagcgcttcacCTGCATGTCCTCATCACCTAG--------CACACAGTCAGTACTTCAGCAACATGTGCAAAACAGACC-AGAGGTGAGGGCATGGAGCTGGGGGTCTCAGAAGATTCAGGAGGAGACGACCATTCTTTGAAAGGCCCAGGGGCCACACACAAGTCGGGGTGGCCCTGCCTGGGGTCTCTGGGACAGGAAGACTCCCCATGGGGACAGGTCTCTGCGTGTGGGCCAGGGGTCCCCTGACTCCTGCAAGAATCC--ACCCCAGCAAGCC------CTCCCTGCTTAGCCATCTCTAGGCTGGGTGGGGGCCACGAGGCCAAGGACAGGGGCCCGGGGGAGATGGGGAAGGGGCCACCAGGTGAAGAGCACAC-CCCTCCCCACAGTGGTCCCACCCCATACCCAGGCCCTCGGCCTCCTCGAAGGTCCCACTCACGGTGTGGCAGGTGGAGCCGTTGCCGTGGCACACGCCACAGCGGTCCTCCATAGTGCCAGAGTCAATCTCAAAGTCACAGCCCCACGTTCTGCAACACACGAGGAGGGGAGGCCCCTGGTGCTGGCGGCCAGCCCTCTGTGGCCCCAGCCCCgggggccagccagggtcaggagaagaaagctgggagtgggggtcgggaggcctctctctggccctgccccaccccagctgtgcctc----tgacccaggtgaacttctctacctccctgagcctcagtttcctcagatgtga------gacagggagacccacccctcccttaaaggcatgtcatgagcatcacaagagacaagagaagggaagagttctgca---aagcctgCGGGCAGGCAGGGGATCTGACACGCCACGGGCTCCTGAGCAGCGCGTGCAGGGAATTTCAACGTCAAAGGCACTGGGGGTTGGCACCTCCCTCCTGGTCCTCCTCGGAGCCCAGGCCTTGATACCCCAGTGGTTTAGAGGGCAAGAAGCAAGGACAAGTAGGTGGCTGGAGACATGGGTAAAGAGGAGAGGCCATCGTTGTTATTAAAAATAAGAATATAAATTGTTACCAAACACTGAGGCCTACTCTTCG-GGGCTCAGAGCCCTTCATGTCACCTGTGCCACCTCATTTAACCCCTCTATCAGGGAGCAAACCACTGCCTGGGGTCAGCCAGCCAGCAagaggtcaagccactgcctggggtcagccagccagcaagaggtcaagccactgcctgggctccggtttcctggctGGGGCGGTGCTGGTGCAGGCATCCAAGGAGACGCAGTGG------GGCGAGGCC-------------------TGACTGG----------------GGGGGGTCCCCAGTGCCAGGAGGCGTGG----TAGGGGCTTTGCCTTAGAGGTCATAGAGGGTAGGGGCTGGGAAGCCCAATGGTAGAGCATGGGGAGGGTGGCCCGAGGAGGACCAGGAGAGAACCTGGGGCCCGCCAGTGGGGCTGGGGGCAGGCAGTGCTGGGAGAGCCTCTTCCTAACCAGGCACACCTTACAGATGCCATTGATGCAGAGGTCCCGGCTGGCTCGGACCTGGTAGCAGGGGGTGCCATCAACCACGGCGTCCCGCAGCTTCTTGGCAAAGTACTCATTCGCGGGCCGGCAGTGCAGCTCACAGGGGTTCACTGGGGGCCCAAGTAGAAGAGTCAT-CAGCAACAGCTGGAGCGGG-AGTATGGAGGCCACCAGGAAGACCCCTCCGTGACACACATCCATGGCAGGCTGGAGGCTCCCAAGCAGCACAAACATGCTGGAGGCTCCGGCTGGGCTGGTAGCTATCTGCAAGGCTGCAGATTGGGGAGCTAGGGGCGAGCAGCAGCCCCAG--GGGACAGTGGGAGTGGCCCAGGCTTGGGGTGGAGACTGGGTCTCCTGCTTGCATCACAGGGTAACCTTGGACCCACACCCCGCTCGCCGCCCTCTGAGTCTCAATGTTTCCATGGGAGGCAGCACTCACCGTCATTGACCATGGGCACCCATGTGTGCAGCTGGCCCTCGTAGAGCATAGCGTCAAAGTGGCTGCACTGGACGTGGCGGAAGGAGGGGCGGCCAGCGGGGCAGGCCTGCAGGTTGCAGAGGCGGAAGCGCTTCCGCTTACCCACACAGTATCTGCCTTTGTATCTGGGCCTGTGGGGAGAACCGGGGTGGACCCCAGTGAGGGCCCAGTGAGTGCTACTGCATGGCCACAGCCCAGAGCAAGCAGCTTC-----CTCCTGCACCCACACCCCAAGATCCCTGC----TGCCCAGCTTTGT--GCACGCTGCTTCCCTCCCTTGGGTTGCCCACCCTGTGGCCCAGACACACCCTCCCTGTCTGTAGGGACCTGTGGGGAGGTGGCAGCAGgaag--cctgagctctgcccccaacctgctgtgtgatcgtggacaagtcttcggccaccctctgggcctcagtttcctcatgtataaagtggggttggggctgcccctgcagagggctgttgagaagctgggacaagctgcaggcatgACTGGCACTGGCTGGAGGGACTAATCCGAGTCTCCAGCCCATGACACCAGCATCCTAACGAGCCCTTGAGTCCTCAGCCTTCCTCCTGGTGGCAGTACCCCCAGCCTGGGTCTAAAGGAAGCGCCCAGGGCCCCAGCCAGCTGAAAGGTATGATGGAGCACAGCTCCTGAAATCCTCCACATTTAGGCCAGGGTCGCTGGCCTCCACTCAGCTCAGACCTGGAGGCCAGGAGGCAGGGA-------GGGGCACAGGCCA--GTCTTGGGTAAGCGCAGGGCCCTGGGTGGGGCCGACTGTGAACCCCATGCCTGCCCCGGGTGGCCTCCTGAAGTGAAGA--TCAGCCGGGTAGTGCC---TCGGTCTACAGTACCACTGGCCTCTGCTtctcaccagatcttcacaccccctgcgcccccccatttagatggggaaacagagatccagagaggtgaagtcactc--acctcaggccacCCCTTCAGTGCTGTCCCATCCTCCCAGCTGCTCCATCTCATCTCAGGCCCTTGTTGTGCCTCTGAGGCCACCAAGCCCCTCCtgctgagtgcccactacagatgagctgcagggctgaggggctggcctgcataaactgcatttgcccctgactacaactttactggatgggcactgctattatacaggtg-gggaaacggaggcccagagaaggggtgaag-----------------------aggggattcgaaccctgagccatctaaggtccagggcccatgctcttccccactgccctctcctgcctccttccagccagcagctg-ctttgccacgtggcctctgctgagtctctccagtctctgggcctcagtgtccccctttctgcaaaggggTCAGCAGTGGGGACCCTGTCAGCCCTCAGAACACTCCTTGAAAGTGACTCAAGGTGGCCTGGACACTCAGACTGACCATTATGAGGACACTTCTAAGAGCCAGGGGCTGGCACAGAGCCAAGCTCCTGCAATCGGCTGACTGC-CTGGGTCCCTCTGTCCCATTGCCCAGGGCACCCTGGGCCCCACACTCACATAGGCTGCATGCACTGCTGCTTGGCTCTCTGTATGCCCACGCCACAGCTCCGTGAGCAGATGGACCAGGCGCTCCAGCCAGACCAGCCACCATCCATGGCCTCGGGCTGGAAGCCCACAGGTATGCACTCCCCATTGAGACACCACTACCGAGACAGACGGAGGTAGAGCCACCCCACCCCCAAGCCTATCAGTCATCCTCACCCTAGTGAGAACAAGGTGTGTGAGAATGCTGCAAAAGGCACAGAGGGGAAGGATGGAAGGTGAGAGAGGCCCCCTCGCAATCATCACAATCATCTGTGACCCAGGCCACATGGAGGCGCTGAG------CAGGGAGTAAAACAGCCCACGTGCTGACTCAGCT s mm7.chr9 34008003 4784 - 123828236 TCTCACCTGTGCCACAAGTGACCGTGCACTTGCTCCAGGGCCCATAATGCCAGGAGAACTCAGGTGGTCGGACTTGATCATGGCTG------TCCCTCTGGATGGTATACTGGTAGTGTACCCCAGGGTTCTTCTCCTGGAACAGCAGCTGGGACAGGCAAATGGGGGCCAGTGAGCACAAGGGCTCTTCTCTATCTGCTCAGAACCTGCCCCTA---GGGTCATCTCCAGCCATCTCTGTGAACTA-AGCTGTACTGGAGACCTACTCTAGAGAGGAGAAAACTGAGACCGAGACTCAGAGACCCCAGCAGCTGAGCATAGCTCAGAATCAGATCCTACAG--AGCCCTAAGGTTTCCCCCTTGATAT----CCTACCTTGGG---------------GACCACCCCATTTATTCCTCCCATCCTGGCCCCTAGAGGCAGGCACCTGGATCCAGACAGGCTCACTGGTGGGGCCTGGGGATGTGAGATTCTCCCAGTTGCCCTTCCGTGCATAGGTGAAGGTAGTGCCTGCCACTCGGTAGTCTCCATTCCACTGGATGGTCCAGCCTCCATTGAGGAAGTACTTATCTGGGTCCTCACTCCGCAGGGCCAGGAAGTTGGCAGCCTCAGCCACCTCCTCAATAAGAATCTCTCTGGCTCCGGCTGGGATCAGCCCTATATCCACATACCCTGT-GGGCAGGATGGTACAGTTTGGTCCCCGGGT-----------TTAATCAGTCAGTTGCCCCC----CACCTTCCTGCACTTGCTTCTG-CTGCTGAAGCCAACGACTCCACACCATCAGTTCATTATTCTGAGTCCCCTCCCCCAAAAAAATATAGGTATTGTATCCACTCTGGGTCACCAAGGCTTCAGAAAGGGCCCACAGATCCTTCCCCTATGGCTCATAGCCCACCATCACTGTCTGGGAAACTAGGAAAATGAACTGATCATTATCAGTTGAGCCTGATCCATCATC----------------------TCTCCTGTCCTGGAAAGCCA-----CTGGGGCCTTTCCTTGCAATGGGTCGCCTGAATTCTCTTTTTCCATTAAGCAACC--CTGTTCTTGGGT---------------------GTGCCCAGCactactc------catgacat------------------------------aagacactgttgttagacccactttacagatgaggaaa-tgaagcactgaggtaggttaGTTGTTCCGCATAGGGCTCCTGTGGGGATACAAGT---------------------------------------CAGCCCTAGGAAGAAATGCAAACTGTGGAGCCCAGCAGT-ATAGCCTCACAG-----CCTACCTGCCTTACATGGGC---AGGCTGTACCACAAG--CTTGCCTCTAGCTGGGATTCTCCTCACCCAATCTCTGGAGTCATTCATCATTAGGCTCATTCTCCACGTCCTATGAGAAGCcttccctgatttccctgacttccctgacttcccAGGTCA-GACCTTCTAGCTTGGTGTTTCCTTCTCTCCCTGAAATACACAGCCTACTGCCTTTGTCACAGT-GAAGATTCTGTCACCTG-------TAAGCTCTTCACCTAGGTGTCCC-----CCCAGAGTTAAATCACACAGTTGGCACTTAAGCAATATGTGTGACTCAGACCTCAAGGCTGGGACATGGTACT----------AAAACTTCAGAAGTCAACAGCC---CTCAGAAAGGACTACCCACCACTCACA----------------------GTCACT-----CAGAAGAACCCCTAAGAGAACAGGTCTC-ACTTGTGA--CAAGGATTTACTGACTGCTGTGAGGATTAGGACCCTGGTCAAACAAGGAGTGCTCTGAT--GCTATGTCTAGTCTAGACGAGGACCCGAGGACC----ACAGGGGC------------------AAGCAACAGGATTACAAGCATACATTCACAGCCCAGCAGCCCCA-ACCATACCCTGGCCTTCAGTCTCCTTGAAGGTCCTGCTCACAGTCTGGCAAGTAGAGCCATCCCCCCGGCACACGCCACAGCGGTCCTCCTCAGCACCAGAGTCAATCACAAAGTCGCAG-CCCACGTTCTGTAATA------GAGAGGAGGCCCTTTGTGCTGGCTGCCAACCCCCTGAG----------TATGTGCCAG---ggctcaggagagagaccatagga--ggaggtcaaaagcctttgcttgggtccagtcccatcacagtcatcctgcctgatgac-----taagctctttttc--ccctgatcctcagtttctctagatgagaaggggggagggggacatcatttcATGCCTTAAGAG--TGTTAAGAACATCCCAGGAGACAGGAGGCAGGACGTGCCTCTCACATAAGACTACAGATAAACGTGGACTCTGGCACACCGTGGAATTTT------TCTATAAATAGGA-TTCACTATCAAAGACACT--GGGTTAGCCCCTCTTTCTTCAGCCTCCTTTAAACCCAAGCTTTAAAA-----------------GCAAGAAGCAAGGTAAGGAAGGTGGCCGGGGCCCTGGGCATGGAAGAGCAGGAAGC------ACTAGAAATCGGAA---GAACTATTACGAAGCACAG-----TGCTATCTGCAGGCTCGGAGCCCAGCATACCACCAGGACCA-GTCTGCCAACCCCTT-----------------------------------CCAGTGAGAGAGGAGGCAGTTGCCTG----CATCCA-----------------------CCTAGGC-----TTTCATGGCTGGAGCTTTATAGGT--AGGCATGCTGGGATAAGCAGTAGGAAACTGGTGGAGACAAAGTGGGTAAGGTGATAGTGACTGACAAGTTGGTGCTAACTGTGGGCTCTCCATTGCCAGAGACAGCAGGGCACAGAGGCTGTGTCTTAAAAGTC--AGACAGCAGGGGCTCAGATGC----------AGCCTGGAGAAAG----CCAGGAAGCCCTGGCAGTGGGCCCAGGGCCTGCCA----------------GCAGGACTAGGCGAACCTCCTCCTCTCCC-ACATACCTTACAGATGCCGTTGAGGCAGATGTCACGGCTGATGCGGCTTTGGTAGCAAGGGGTGCCATCCACCACAGCATCCCTCAGCTTCTCTGTATTGGAGGAGTTGGAAGGCCGGCAGTGCAGCTCACAGGGGTTGTCTGATGGGGCAAGGGGAGGACTCATGGAGCGACACCAAGAGCAGGCATTACAGAGGCCACCAGGAAGACCCCTGCGT------CCTCCATGACA--------------------CACA--------------------------------------------CGCAGACTGAGGAGCTAGAGATGAGCAGCTCTCCCAGCAGGGACA----------CCAAGGCCTGA----------GGGTCCTATG------TCA---------CTGCGGTCCATACATC-CTCA----CCTCTGGGCCTCAACATCCGTGTGGGTAGCATAACTCACCGTCATTGGGCACAGGCACCCATTTATGGAGCTTGCCCTTGTACAGCATGCCATCAAACTGGCTACACTGGGTGTGACGGAAAGAGGGACGGTCCGGCGGGCAGGCTGGCAGGTTGCAGAGCTGGGACCGCTTCCTCTCCCCCACACAGTACTTGCCTCTGTTCTTAGGCCTGTAAGGAAAGCCATG--------------GGGCTATGAGTATGCTATTAGCT--------CCCATGCCAATCAACATCTACATCTTCTGCACCCA------GAGTCCCCTGCCCCGCCCCCACCCTCCCCATCATGCTGCTTTGCCCTTGGGGGCTG-------------CCATATACACCCTCCCTGTCTCCAAGGATCTAAAGACgagtggcagcaagaagaccctcaggctcagcccagagctgctgtgtgaccatgagcaaatgcactgccatgttccggacctcagtctccttctctctaaaatggagttggaa-tgcctcta-agagggctactaagaggCTAGAACATGTAGTGGGC----------------TGATGGGCTAG---------------------------------------CCTTGGGTTGTTAGAGTTGTTCCTGGGTGCAGCATACCTGGGCCAGGTC-AAAGGAAGCCTCCA-GGCCCCAG--------AAACTACCTTG--GCTTGGCATCTAACCTGTACCCCATCCAAGCCAA----GCCAGCCCCACATTGGCTGAG----------CTGGAGGCAGGGACATGCTGGGGATAGGGACCATGGGCCTGGTGAAGTACCATCCCTCAGATGGAACTGGCTGTGAATTCCA--CCT--CCCTGGCAGCC-----AAGCAAAGAAGTTTGCCCAGTGGGGCCAAGCCAGTCTGC-----------CCCTTG--TTTCATTAAGTCT-------CCTAAAGCCCCC---TTTAGATGAGAAGGC--------------------TCACCCGAAGCTACAGCCACCCCACCAGTACTGCCCCATTCTCTCAGCTG---CAGCCAATCTCAGATAC--------AATCTCAG------------CTTGTGCTGGGCGTTTCCCGCAGCACAA--GGAAGGTTCCGTGCCTTCCCCATATTACCTGACTTTACCC--AATGACAACTTGACTAGGAAGGCTCTGCTAGTACCTATTAGCACCAAACTGAGGCCCAGAGGAGCCATGGAGAAGGAAGGCACTTGTGTGGGGACAGAGGACCTAGACCCTAAGCCTCCCTGGTTCTAAG---------------CATTCACCTTTGCATCCTCCTCCCTG-CAGCCACTGCCTTTGCAGCAAGGTCTCTG-TGCATCTCCCCCGGCTCTTGGA--GAGCACTCCCCTCTTGGCTATCGTGTCAGCTCTGAGCAAC------GCTTCCAGAACACTCCCTGGGAGTGGCCCGTGGTGGCTTAGACACTGGACTTGACCATTCCAAGGACACTTCTGAGAGATGGAGGCTGAAACAGAGGCAGTCT-CTGCTCTCAGCTGGCTCCATTCGGATCCTCTCTCCCAG------------CCTGGGCCCCACACTCACACAGGCTGCGTGCACTGTCGTTCAGAACTCCGTACACCCACGCCACAGCTCCTCGAGCAGTCAGACCAGGCACTCCAACCGGACCAGCCACCGTCCACCGCCTCGGGCTGGAAGCCCTCAGGGACGCACTCTCCTTTGAGACACCACTACTGAGACATATGGGGGGCAGAC-------CCCCGACACCTGTCAATCATCCTCACCCCATTGAGATCAAAGTAGGTAAGACAGTGTCAAAAGACA-----GAGGAGGATGGAAGGTGTAAGAG----------AGACTTTATGGTCACCCACAACACAGACGCCATGGTGAAGCTGGGTGACCATAAAGAATAAAATAAAACCCATGTTGACTGGGCC a score=37366 s hg17.chr15_random 520436 2023 + 784346 GGCCCGGTCACAGCAGGAGGTCTGGCCTCTCA---CACATCCACTGCCGGGACTG-GGAACATCGCCTACCTTATTCTCCCCACACCGGATGCCGTCCACGGCTGCATCCAGCTTGGAGTGACAGGTGGTCCCCACAGAGCACCAGAGTGTGTGGCAGACATTCTGCGAGGAGGAGGGCATGGGCCATAGCCTC--ACCCCCTCCCCAGTGCCGCCACCCACCCTGCCCCCCTCCCTGTCCCCAAGGGT-CCCTGGGCACCCCTCCACATGGCAGGGGCCCACAGACCCCCAGAGGTCCCTTCTTGTGTGT--------------CTGCTCCCACCTTCCTCCCCAGACCACGTGGTGGTGTGGGGCGCCC----GGGGCTGCAC---------------TGCTCAGAGTGGTCCTCAGCTGTCCACACCTCTCCCGGCCC--AGCGCCTCCTCTGGAAACACTCCTGTTAGAAGATCACTTCAGGCGATCTTCGCCAGGATAAATAGACCCTC-----CCCACAGGGG-------TTCCTTTTCCCTCTTATGAGCCagctccagagaggcgaagggacttgcccgaggggtcacagtcggtccatggttgacccagaattcagagctgggtctgtggccgcccatc-cctggcctctcccacaggccactTGACGTCTCACAGTGTCACTCAGGGGCGTAG---CCCAGCCCAGGCGAGGTTGCTCCCAAGCTGGCATCCACAGGCTGGTGAAAGCTGTCCCCTAAGCCCTCCTGTCGGGTCCCCACACCCCCACACCCACACCGGCCCCACTCACATCCATGTCCTCGCAGAAGGCAGAGTAGGCCCCATACTGGAGGTGGCACTGGTGGCTCACATCATAGAGGACCCCAGGCAGCACTGATGGGAAGTCAATGATGTCCTTGGCAGGCGGGTCATCCAGGCACAGGCTCCACCCATGGCTAGAGATGGGACGGGAGGATGG-----------------AGGG---GGGCGCAGCCTGTGAGACCCATCGGAGAAGCCTCGGTGGGGCCAGGAGAGGAGGAGAGGTGGGAGGGGGCACAGAGCCCTACAACTGTAGGAAACTCCAGCCTCCCCGCTCGGCTCAGCCGATCCTCCACCTGCAGCCAGTAGCACAGGCCCTCCCAGCCAATCTCATCTCACCTCCTGGGCACTCCAGCTGGCTAAACA--ACCCCAACCCCAATCCCAGGCCTCTGCACACGCTGC------------CAGGGCCCTTCCCTCAGAAGGCCTCCTGGACCGCCAAACCCTCATGTGGCCCTGCTCTCCGACCCTGCAGCCTCCGTGTCTGAGCCCAGACCCTGGAGCCAGGCCCGACAAGGATCCGGAGAATATCACATCACAGTTGACACAACAGAGCCTCCGACGGCCCCACCCAGGCAGAGACCTCGGGTCATCTGTGGAAGGGCAAGGTCTGGAAAGCAGCCCCTCCCCTGGGAGAGAGCCTAGGGCATCCGTGCCTGTCCCCTGTTTCCCCCACTCCCCAACAGGGCTGGCCTCCAGCCTCTGTCATACCCTATCTACTCCTGCCTTCCTCCAGCTGGCATTCCCTGGCAGCGGTGGCGGGGAAACTGGCAGACACGAGCAGGTGCCATCTGTGTCCACCACACGCTCCTGCTGCTGCGGTGTGGCGAAGACAAGGCTGCCCAGACCACCACGAGGCAGCGAGCGTGGAGTC--CGGGGC-CCTGGGGAGGGCGGCCCAGGCCCAGCTGGCACCTGCTTCTGCCCCTGCCTCACTCTGTACAGCCCTCAGGCATGCTACTGCTTCTGGGACCAGTGACCAGCCTGCTGTACCTGCTGGACCTTAGGCGGCCACTACAACGGCTTAGCAGCAGGAGTGCCCTGGCATGCTGACCAGCCCACCCACAGCTCATTGCT--GTCCT---------GGAGGAAGGTTTGGGGCCCTCTGTGGGGCAGCAGTGGCTGGGGAGAATTGAGCCATGCAGACATGCGGGGCTGGGGATGACCCAGGCAGCCACGACTTGGGCAGAAGCATGGAAGGAGGCAGGACCCATGGGACCTGGGG--------------CCTCTAGCCAGGCAGGGGAGATGGGGAGGCAAAATCCCTCC s mm7.chr9 34012890 1791 - 123828236 GGCACGGGCA---GAGGAAAGACAGCCTCCCAGACCCCATACTCCGACAGGCTTGAGGTTTCCCACGCACCTTATTCTTCCCACAGCTCGTGCCATCCACAGCCGCATCCAGCTTGGAGTGACAGGTGGTCCCCACAGAGCACCATAGTGTGTGGCAGACATCCTGCAAAGA----GGCACATACATTACCCTCAGACACGTTCCCCAGGGACAGCACCCGCTCTG--TCCCTACGGTCCCCCAAGAACACCCCGGACACATTTCCACAGGG---------ACAG------------CCCATCCTGTGAGTGTGCAAACTCGAGACTCCTTTGGCCCCTCTCCCTCAGTCACATGATATCATGGGGCCTTTGAAAGGGGCTGCCCTCCAGGCTGGGTTGGTGCAGACAGCTGTCTCCAGCTGGC--CACCTCTTCCAGCCCCAGGCTATACCTCCTGAAACATTCAAGATAGAAGGTCAGGTCA---TATTTTTACAAGAAC-------CTCTCTGGGACCCTGAAGGGCTGATTTTTTTTTTCCCTTCTTCTATGCCaagtccagaga-gctgagggacttgt--------tcaaagtcacctaagggttgacatagaatccagacctgagcctgtgcccatccaaagccAGGCCTCGGCCACAAGTCACATTAGGTATTACCATGCCCCTTGAAGGCACCACCCCCCAAGCCAGGCAGAGTTTCTCTGAGCCTGGCATTGTCAGATTGGTGAGGGCCACCCGCCTATGCCTCTCAT----------------------------GCCCTCACTCACATCCATGTCCTCACAGTAGGCAGAGTGAGACCCATACTGAAGGCGGCACTGGTGGTTCACATCATACAGGACACCGGGCAACACCGAGGGGAGTGCAATGACATCCTTGGATGGACGGTCATCTAAGCACAGGCCCCACCCACGGCTGGAAAAAAAAAAGGAAGAGAGAATAACTTGAGGTCCCTAGGGCACGAGTGCAGCC--TGAGACCCATGGGAGAAGCCTGGGT--------------AGAAGAGCTAGGAAGGACTTGTGAACCTGGTG-----AGAAAATGACAGTCTTCCACCTAG--CCAGCAGGTCATGTGACCCCAGCCTTCCAAGGTGGCCCTGAAGACCTCTCTCATCTGGCC-----AGATCTCCAGCCAGCTGACAAATACCCCACCCCCACAGGCAGGCCTTGGCACGTGCCCCACCACAGAGACTCTGGCACCTATCTTCCAAAGG---CCTGGTCCACCCAATCCTCAAGTGGTTATGCTCTTAGCTCCTGCAGCTCCT--------GCTGGGACCCTTGGGCCAGGC----------TCTGGAAACTGTCACACCTCAGCTGCCACAACA-------------------------AGAGACC--------TCTGAGGAAAAGCTACCC-----AGCCACCTCATATCCT------GACCCGAGGG-------ACCAGCCCTCTGCTT--CTTACTGCCCA----------------------------------TTTCTTCTGCCTTCCCCTAGTCAGCATTCCAGGACA---GTGACAAGAGAATGGGCCAGCATGAGCAGGGCCAGCCCATGACCATCACACACTCCTTCCGATGTAGTG-----------------------CCGCCAGCAGGCAAGGAGCAAGGGGGCAACAGGGCTCTTGGGAATGGCCTCCCAAGTCCCACC--CAACCATCTCTGCCCT-------------------------------------------GACAGTGA------GGTTGT-----CTGGA----------------------------AACGGGAGAGTAGGAGCATGCTG-CCAGCCT-CCTGGGGCTCGTTTTTTGGTCCTTCTGGAATGGGAGGAGGGTCCAGGGCC-------------CAGAGCCTAAAGAGAATTGAGCCACAGAAACAGGC--ACCTAGG--TCAACCAGGCAGAAAGGACTTGGTTGGAAGCA---GTGGAGCTAAGATCTGTGGGACACAGTGAGAGATAAGGACAACCCCAAGCCA-----GGGAGACTTGGGGACAAGATTCATCC a score=8934 s hg17.chr15_random 523726 247 + 784346 CTTGGGAGTCAGAAACTCAAGGTGGCCGTCAGCCAGCCCTTCCTTCCTCTGGCAGGCTGACTGCCAGGTTCTCTGCACTGCCG---ACACACCCGGATCCCCCAAACCATCAGCCCTTCCCCTCCACGCCCCTCCTGAAGCTAACTATAGCAGGGCTGGGCAGTCCCACAAGAGGTCAAAGCAGACAGTAGGTGACTCCAGTCAGAAGCTTCACTCTCACCTCAAGACTGCAAAGAGCTGCCCACCACTG s mm7.chr9 34015105 233 - 123828236 CTTGGGA-----AAAGTCAGAGGGGGCG-------GCCGTTCCTTCCTCTGGCTGGCTCACTGCCAGGCTCCTCCCACAGCCGGACACACGCCAAGGTCCCCACACCCATCAGCT-GTCCCTTCAGGACTCTTCCTTGTGCTAATTATGGCAGGGCTGAGCCACCCCACATAGGGTCGGAATAGACGAGTGGTGACTC----GAGAAGCCTTACTGTCACCTGGATATAGCAAAGAGCTGTCTATGCCTG a score=16492 s hg17.chr15_random 524262 952 + 784346 GGCCAGT--CTAGGTTCTTAACCACCAAACAAAACTCTTC----TCTGCTTCCAATC-CCACCCCCCACCCCAGTAATCCCTCTTCCACTGGAGGCCAGTATCCTTGCTCTTACATCCCTAATGGACCTGGTCACATCCCTGCTTAAGCCCCACAGT---GAGTGgacttctagaaaaacatggcacattgagcagacagatttatcgctgcttccttccaagactccactataatgacagtagaggaaataaacaaggcataaatccat------------------aaggggtgatgatgagtaatgaaggatgtcaacaagattctggaagctgggaagcagatggccaggcagtagctgacttgctagagtgatgaaagctgagagtcagattcctgcaggggggaaccacccagaagcagaagcccgaaaaggctcaggaactgagtttgcagggactcctcagggccttacggccaggagggctgaagacagtagggctgaaagtctgtaagaaccgatcagaccctagatcccctccccaaccctgagtagccaagtgacggccacctgccacccagcagagggccagggatcactccctggggagggtgaaccaggaggctctggcccaggaacggtggacacacatgaaggcccaaggcagaaggacctacagagaaaaggggac-aagcaaaagtctacacattgaagggtaagaaacacgccaagcccctttcccacttggatgctggaatgctgcagc--------cagacat-acactctcccaggaaaagtcgagaggattcctctcaggaaa--ctgaatcactcagaaaaatgacctcagatagtgacattagaggat----------------------ctccccaaaatagccccatctgaaccagtccttcagcagtgacttggaaaagtcctgcccaagtccacaaactgcccaattag----tgtctct-gcatctccttgctatatatgaaatacag s mm7.chr9 34016635 874 - 123828236 GGCCAGTGTCCAAGTT-TTAGTCACCAAACTCAACTCTCCAAACTCAGTCTCCAGTTGTCACCCCTCACACAA---ACCACTCTTCCAGGGGAGACCGGTGCCCATGCTCTCACTAGCCCGGAGGCCCTAGGCACGCATCAGGCTA----CCACCGTGCGGAGTGGGCTTGCAGAGAACCACAGCACACTGAGCAGGC----CTGtctctgct-------aaagcttttctaccctgacatttgagg-aataaacaaaacataactccacccggagaagaggagaagagggaagcgatgacagcagatgagagatgtcgacggaattctagaagctggaaagcagatggccaatcggtagctgacttgggaaagtgacagaagctgagagctaaa-gcctgtgaggagaaatgatggagaagcaGAGGACTG-GAAGACCCGGGATCTCA--------GAGCACCTTATCTATCTGGGGCCAGCAGAGCTAA----------TCTGAAGGTTTCTA--------------------------CTCCAAA-------------------------------------------------------------------GACCCAGGTAGATCTAGCCTAGGAAGCCCAGTCACAGGC-AGGGCCCATAGTGGAGGATCCTACAGAGAAAGGGACACTAAGTGTCCCTTTGCACAGTGAAGACTGGGTCAC-CAGCAAGCCC--TGCCCTATCAGATA-TGACAGACAACAGCAGATGTGACAGATGTGACACTCTCCCAGGA------GAGTAGCGTCTTCTCTGGGTATCCTGAGTCACTCAGAAACATGAAGTCAGTTTCTAGCATTTAAGGATGCTCTCACTTCCCCCCCCCTCCCCCCACAGAACAGACGCACCCCAGTGAGCTCTTCATCGGTGACTCGGAAAGGCATAGCCAAAG-CTATAGATCTCCCAATAGGAAGCTGTTTCTCCCCTCTACATTCTGTATGTGAAAAGCTG a score=18359 s hg17.chr15_random 578357 590 + 784346 CTCCTCACATGGGTTTAAACGTGTTGCCTTT-TCCCCCTGATACATTTTGTTTAAATCCATGGTCATCTTGCCATTTAGTGGTGTGGTTTAATTGCATATTTGGGTTAGTCTGTATGTAA-ACATTTAACATAGGTGTCTCTGGGTTAAACAGGAATCCTATTCATCTTCTTCACCGATATGGTCTGTGGACTCTGATGAGCCAAATCTGACATCAGTTCTGGAACGTCTAGAAGATACTAAGGAGAACAGTTCGGTAAGGAAAGAAACCAAGCTATTTTCTCTTTTCCTCATGAACATTATATTTAGAAATTAAATGTTAAGTGATAATATTATATAAA------------------------------------------------------------------------------------AACATGATTAATAACTATAATCTTAGAGGAATTAAAGTCTGGGTATTTTAAGTCCTCCAAATCTTATTTACTACCTGGTTTCTCTTTATTATTTCCCACATGTATAATCTTAGTTTAGATTAGCAATTCGGGATCTCTTTT--TCCCTGAATTCTAACCATTAAGCCAAGCAAGCATTTTGGGTGGAGACCACTAGCCAAGGTGGGAAGTAGAAAGAAGACCAAGGTGG-AAGTGAAGGGAGAGATGGGG-------AGAAT s mm7.chr9 55193134 631 + 123828236 CTCTCCACATGAATTTCAA--TGTTGCCTTTCTTCTTTTAATGAACTTTATGCAGATC-ATAATTACCT-GCCCCTTAGTGGTATGGTTTAGTTGCATCTCTGGGTTGGTCTATTTGTAATATGTTTCACCTAGTTGTCTTTGT----AACAGGAATCTTACCCATCTTCTTCACCAATATGGTTTGTGGACTCTGATGACCCAAATCTGACATCAGTTCTGGAACGCTTAGAAGATACTAAGAACAACAGTTCGGTAAGGAGATGAACCAGACTTTCCTTTTTCCTTCTCATGGTC-TTATGCAGAAACATTAAATATTAAGCAGTTATATGATAAAAAATTTATCATACTAAAATTTACTCCATTTATTTCCTTTTCCTGATAATTTTCCATCCCTTCTAAGATCGTAATACAAGTTGTTATAGCATGATTAATAATGACAATTTTAGCAAGGTTACAGACCT----TTTGAAGTCCATC--------------------TCCCTCTTT--------CTACATGTACATTCT--ATTTACATTAGGAATTGAAGTTCTTTTTTCCCCCCTTCATTCTTGCCATTAAACAAAGCAAACATTTTTGAT--AGACTGTTGGGTGAGGTGAGAA--------AGGACAAAGATGGTAAGTGA--GGTAACATAGGATAGCATCAGGAt a score=2968 s hg17.chr15_random 578947 80 + 784346 GACACCAGAACTAGTGGAGGGGATTGCCTTTTTTCTTTCAGGGTCTGTAAGTCTGCAGTAAAAGTCAAAGGTATTCAAAA s mm7.chr9 55193951 79 + 123828236 AACATCAGTGTTTGTGTTAGGGAATTCCTTTGCTAGTT-AAGGCCCACAAGTCTGCAGTAAAAGCCAAATTTATTGAAAA a score=16865 s hg17.chr15_random 579901 554 + 784346 AAAAAATGCTTAAGTATTCAA---AGACAGCAA-TTACAGCTACTGAGAACATCACTGTAAG-CAAACTGAGGCAGAGAAAACAAACGTGCTGATGAGGATTTGAACCACCTAAGCTGCAGAAACCCACTGGATGGTTTCCTAGGTTCCGAGTTGGCATTATCTTTCAGAACAATCTTCTAGAAGAGATCACATAACACTGTTACAAAGGATCTGGAGAAAGGGACCCTGGCTTCATCACTGTGGCTCTCCAGTCATGCTTTACATTTGGCAGTGACTATCTCCATTCAACTCAATTCCCTAACCCTAAACTAGCTGACATTTATCAAATACTGCCCTTTACCAGGTCTAAGTAAGTTTAACTCCCCCCACCCC-----CACCAAAAAAAAATCAAGATACTAAGGGATAT-ACTATTCACAAAAGGGAAACCTGTCTCCTCTTCATATACCTGTTCCTTTCAAGGAAGGGTATAAAAATGGGGATGAGGGAGGA----TAACCACTAGGAATTTGACCCTATATTATAAATTGGTCAGATAAATGAAAATAA----TTCCTCTGGACTCAAA s mm7.chr9 68641518 536 - 123828236 AAAAGTTGCTTAACTAGCTAAGGTAGAGAACAAATTACATATACTCAGAATATTTTTCTAAAATGAACTAAGGCAGATAAAATAA------TGAAATTGATCTGAATCAACTAGGCTGCAAATTCCC-CTGGATGATTTCTGTAGCTCTGATTAGCCATTGTTTTTCATAATTATCTT-TAGAAGCTATTAGAGACCACTATTACAAAAGCCTTGGGGTAGGGG---CAAGCCTTGTTG-TGTTTCTCTCCTGTAATGTTTTATAGTTAGCATT--CTGTCTCTACTC----------CCT--CCCTCGATTACCTGACACTTATCCAACACTACTCCTTGCCAGGTCTAAGT----TTAAC-ACTCCCACCCTGCAGACATCACCAAAAACT-----TACTAACGTATACCATCATTCATAAAAAGGAAACCCA-AGCCTCTTCATAATCCCATTTCTCTCAAGAAAGTGCATTAAAATGGAGATAGAGAAGGACAGATAACCACATGGAATCTGACCCTGTATTATTAACTGGTCAAATAAATGAAAACAATGAGTCTTTCTAATCTGAAA a score=7841 s hg17.chr15_random 581040 396 + 784346 TTTTAATCATAGT-----------------------------------------AAAAATGAGAAAAATGCAAGATGAAGTTAACAGCATTGCTTTATTTCCCATGAAAAGCTGTTATAAAGCA----------TTCT-------------------------------CAAAATAAA-----CTGTTATTCAGCCACAAAT------------------GACACCATCACTTTTTTATTC-----ATAGGGCACAGTATCGCTGCCAAAGAGCTTTCCTCTATATGCTCTCTTGCAGGGCAAAAAATATTATCTATGTTATACAGAAACACAGTAAAAAAAGTGATTTACTTAAGGTCCCAACTACTAAATAAAAGCTAAACTACTCACTTCCTCCTAGATTCAGAGAGAGCTCCAACATTTTCTAAAATTTGGTATCTTGTTGTTGGGGTAGGCACTTTTTGGCAATAATGAATAGACATTTAATTAGCCAATCAAAAAAACTt s mm7.chr9 68642178 473 - 123828236 TTTTGTTCATAATTTCCTTTGTACAACTTCAGCCGAATGACTTTGTATCAGTACACAGACTAGAAAAGCAAAGCATGAAGTTAACAGCATTGCCTTATTTGCCAAGAAAAGATGTTACAAAGCAGATAATTTATTTCCTTCCTTTGTACTGGGTCTTGCATACACTAGGCAAAGTGGAGTACTCTACCACTGAACTACCAGCTCAGAGTATTTTTAAGTAAAGGTTATCACTTTCCCATTTGTACAGTATAGTACAATACTGTTGACAAGAAGCTTTCCAATACATCC-------CAGGGCAAAGGGGGAC-----TGTTTTATGAAGAAACAATAAAAGAAA----TTATTTAAGATCCTAAATATTAAGTAATGCTTAAAGTTCTC----CCTCCCAGATTCAGTG------CTAATATTTGTT--AATTTAGTAGCTTGCTTTTGGGAAAGGTGTTTTTTAATAACAAAGAATAGA-----AATTAGCTAAACAAAAAGTATT a score=5908 s hg17.chr15_random 587925 315 + 784346 ctccctccctcccttccttccttcctTCGACTTCTCCAGCTCC---------------TTTACTTGCTGCTCCAACTGCAGTGTGCT---------CTTGTTCTCGTTGTTCTGGACAGAAAGAAGCAATCAGTGGCCACCCACTAAAACTGGAGACCCCAGAACTTATTGTCTGC---CTCCCATGGCACCGGGAAGGGTGGAGGCAGGTTAGAAAAATATCCCCTCTCTCCCACAGCCATCAGAGCAGGGCTCTGGCTC-ACAGATGCCTTTAGAAGTACCATTTCATGTGAAGGCTACAATGcccc--------attttacaggtggggaaacaaaggccttgagGGC s mm7.chr2 150236704 325 - 182548267 CTCCTTCAGCTCTCCCAGTCTCTCCTGCAGCTCTCCCAGCTTCCGGGCTAGCTCTTTCTTGACATGCTGCTCTGACTGCAGCGCACTGGTGATCTCCATGTTCTCATTGGTCTGGACAGAAGGCAGCAGTCAGTAGG-ACCTAATGTGGCAGGGGTCCCCAGAATTGCATGTGTGCTCCCTCCCACAGAGCAGGGAAGACTGCTGGA-------------------TCATTCCCACA--CACCA---CAGGTCTCTGGATTGAGAGGTGCTTTGACAGCTAGCACCTCATGTGAGGTGGACAGCACCCTTGAGGGTTACATTCCCTGTGAGCAAG-GAGGGCCTGCAGGAT a score=13273 s hg17.chr15_random 588347 887 + 784346 TCTCCTCCTGTTCATGTAGCCTCTCCTCCTGTTCATGTAGCCTCTCCTCCTGTACACGTAGCCTCTCCTCCTGTTCACGTAGC----CTCTCCTCCTGTTCACGTAGCCTCTCCTCCTGTTCACACAGCCTCTCCTCCTGTTCACGTAGCCTCTCCTCCTGTTCACACAGCCTCTCCTCCTGTTCATGTCGCCTCTCCTCCTGTTCATGTAGCCTCTCCTCCTGTTCACGTAGCCTCTCCTCCTGTCTCCTGTTCAGGAGACTCAACATCTGATTGTTTTCCACCTCAGCCTGGAGCTGTCTTCCCACACTCTCTAGCTCCTTCCTTAGGTGGTTGGTCTCATCTTGTAGCTGC---TCCACCTTTGATGGCCCTGCTGGGGGCTCTGGGGCCAGGGGTTCAGCTGAGAAAGCAAGCAG--AGAATAAGGGCCTCTGGATTCTCAAAAAAAAAAAAAAAAAATCCTCCCTTTGGTGCAC---------AGCTCCTCCTCTCAGGCTTCCCAAACTTGGCCTCACTGCTAATGACTCCTCACACCCGGATGGTAGACAATCTTCCAAGTCACTTTCAGATAG-------------AGAGCACTGTGGGTGGCTGACAATGGGCACTCctccctctttactgatggggacactgaggctcat-ggagatgacaagacttgtccTC-------CCCTGGCACAGACCTCTTTCCCTCTGCCTCAAAGCCCTTCCATCCACCCACCTCCCTGGGGCATTCTAAGTCACCCCCACAGCCCTCTAATGCCAGTCCAGCTGCCAGGTCATGCCAGCCCCATCTTACCCGTCTGGTTTTTGAGTTTGAACAAGCTCCTCCCAAGCTTCTGTACCAGATGTATCTCATGCTTCTTCTCCTCCTTAGATGTGCGAACCTGCCCAAAGCAAAGGGGG s mm7.chr2 150237029 802 - 182548267 TCGCACCAGCCTGACGAAGCCGTTC-TGCAGCTCGGCCAGCTGCTCCTTCAG---------------CTCTCGGTTCTGTGACAGTGCTCTGCTGATGGTGGTGCGGTCACTCTGCATGCTCTC-CAGGATCTGCTTGCGCTC---------CTCGGCCTGCTCGC-----------TCCAG-------CGCTGGGCCTCCCG---------------CTCCAGCTCCAGCAGACGCCCCTCCTGCTCCCGGTTGAGGTGGCTCAGGCTCTCATTGTCCTGCACCTGAGCCCGTAGCTGTCCCGTCAGCCTCTCCAGTTCCTTGTGCAGCTGCTCGACCTCTCCCTGCAGCTGCTCTTCCGCCTCGGAGGGCCCAGCTGGAGGCTCTGGAGGCGGTGGCTCCTCTGAGAAAGGAAGTAGGCACAGTGAGGG-----------------------------GGTCCTCTCTTGGCTCTACTGGGAGTCAGGCTCCCTGCCCCAAGCT--------CTGGCTTCTTTTCTGTCAGGGTCTCA------GATGAGCTA-AGTGTGTCAAGCTACTCTAGTATAGTTCTGTGGTGCTCAGTCACCTGCAGAGGTATAGCAGTAGGCATGCCACCCTGTTT---------TACACAGAGGGACATAAGAGATGACAAGGCGTGTCACCTGGTCAGTCCTGACAGAGACCTTTTGCCCCAT--TACAATGCTCTCACACCCCCTTGC--CCCCAGGGCTATGGAAG------CCACTGGCCTTTGA-GCCACTCCCGCTCTCAGGTCACCCTTGCGCTA-CTCACCCATCTGACTCCGGAGTGCGGCCAAGCTGGTCTCCAGCTCTTGTACCTGCCGTTCTCTGTGCTCCTTCTCTTCCTTCAGTGTATGCACCTGCCCAAGGCACAGGGGG a score=35001 s hg17.chr15_random 589266 1128 + 784346 TCCAGAGACAGAGTTTGAGAAAG--GCCCACCCCCCTTCTGCCAGTTTGTGATTTAGAAACGTGcattcattcaacaaacatttactgagcatgtacaggccaggtacagttcttcatagcagagatataaaacagcaaaggacagacaggag--cccttggccctgaggtttccattctaggggCCTTTAaatctctgact-ttcagagctaaccaagacctttgatactctctacctcctcca----gaaacacgagcataaagaggagagatggcttgtccagactcaaaaagcaaattagggactgaggcagggcagaaatatggacccctgacaaccagtcAGGCTAGTGCTTCCC----AGAGAGGTGACAACCCCAGGGCATGTGTGGCAAGGACTAGAGCAGGG-GTGTCTGGAGAAGAGAGAGTCAGCAAAGAGGGCAGTGCAGAAGACCCATGCTGCATGTTCTGTGCTCTGGGGTCCCTCCAGGTGAGACCTGGGTGCCCAGCTCCCCATTTGCCCTTGGCATCAGGGGCCCC-TAGCTCCTTTCTTCAGGGCCCCAAGAGGAAACTGGAGTCCAGGATTGACCAGCTGTAATCAGGGGACCCCACTGGACTCTTACCAGTGAATTGATGTTTTCAGTGAGTTGACTGATTATTGCGGAGCTTGAATCCAGGGCCACTGCTAGTTCTTGGTACTGGCTCTGAGGTGCATGCAGAGAGAAGGAGTTGGAGGAAGATTGTGGCGAGGGGTAGAGAGAATAATCATTAGGGCTGGTGGGGGTGTGTGGGCTGCCTCAGCTGGCAGAGGGGCAACAAGCCCCTGCTGTGGGAGGAGGTTGGAGGGCTGGCCTGCAGGGTCACTGCACCTCGGCCCAGGGCCTCTTACCTCCAGATCCTGCAGGGTAGTAGAGGATGCACGGCCCTCCCCGTAGATACCTGTTGCTGACTGCAAGAGATGAGAGTGCACATGGAGATGTTCTGTCCCCCCTCACTGTCTAAGCCCTCTGACTTCCTTTCTTCCCCCATCAACTGGCAAAAGCTTCTTTTCTGCCTATCTTGGACCCTTTTCCCCATAACTCCTTTGTGCCAACTTCTCTCGTGGTTCTTATCTCCCCACCATCCCACCCTGGGGCCC s mm7.chr2 150242557 1047 - 182548267 TCTAGAAACA-AGTGTGAGAAAGATGACTACCC----TCTGCCAACTTGGGACTTGGCAGAGTGTGTCGAATTAAAA--------CTGAGCGTGTCTTG--TGGGCACA-------------------------ACCAAGAGATGAATGGGAGAGCACTTGTTTCTGATGAGTCAAT-----GAGCTTTCCAACTCTTGCCTCTTCAGAGTAGACAGAGGTCTCTGACCCACTCCAAATCTGCTAACAGGAAACTCAAACCCAGGGAG------TGGTGTGGCCAAAATCAAAGAGCAAATGAGGGGCTAAGCCAATA---GGACATGGGGTCCTGACAACCAACTGGGGTTGTGTTCCCCTCTACTGGAGGCACCGAGCTCAGGACAAGTAGGGCGAGGACT----CAGGATGAGTCTGCAGTACAGAGTGGAGGCAGAGAGGAGAGC-CACAAGATCCATGCTGCATGCTCTATGCTCTGGG-TGCCTCCAGCTGAGACTCAAGCCCCAGGTTTTCCATTC-CCCTTGGTCCCAGGGGCCCCCTAGTCCCTTTCTTCAGAGCCCAAAGGGGAAACTGAAGCCCAGGACTGGC-AGCAAGAATCAGGG-ACCCCACTGGACTCTTACCAATTCCTCTATCGTGCTACTGAGTTGTTTGTTTGTTACATAGCTGGAGTCCAGGGCTACTGCTAGCTCTTGGTACCGGTTCTGAGGCGCATGCAGAGAGGAGGAGTTGGAGGAGGGATGGGGGGAAAGGTAGAGAGAGC-ATCATTAGG---GGTGGGGGTG-GTGGGCTGTCTCAGCTGGCAGCGGGCACCCAGGTCC---CTGTAGGAGGAGATAGGC-TGTTGGCGTAAAGGGTTGCTGGGCCATGAGTCCAGGCCACTCACCTCCAGTTCCTTCA---TGTTGGAAGATGTGAGGCCCTCCCCGTTGATGTAGGATGTAGACTAGGAGAGACAATACCTCACATGGAGATGCTCTGT-GACCCTCAATGTCTAATCCCTGCAGCCTCCTACTTCCCCC--TCAACTAGCAGAATCTCCTTTCCTGCTCA---------------CTCACACCCCCTTTGTGCCA---CTCCTTATGGCTCTTTTCCCGCCATGGCTCAACCTCGCCGCTC a score=14015 s hg17.chr15_random 590436 571 + 784346 TTCTCATTGGCCTGGCTTCCCCTTGAGACTGGGGATGAGGAAAATCAaacagcaacgaccatttcctcagtgtcctgggtgtttgcagcaggccatgtactaagg--attcacataaaagcaacaataacgaatctcatttaaacttcacaaatggaagtcaaaaaataccacctctattatacagatgtgaaaagagaggcccaaagacctcaagcaacttgccctaaa----tcatat-gctaatcaat-------------------------------------------------------------------------ccctaatcaattcttagcagacggagaggcaggat-tcaaatccagaattcttaaccagtaCCCAACAGTCCATCTACAATCTTAACAATTACCCTCTACTGCCCCTTGGGCCCCCTGTCCCCAGGAGCCTGGCCCGCCGAGACTCACATCCCCAGGTGAGTGGTAACCACCAGAAGTGGCTGTGTCAGGGCTACTGCCATT---GACTTTCTTTTTCCTGTTAGCTCCTGCTGGAATGCCAGGGCTCTTCCTCTGCCAATATGCTTTTAACTGTGGGAAAGAAGAGCAGTAACACTCATGAGAATGATCAGCCCCTACAGCCACATCCTC s mm7.chr2 150248287 633 - 182548267 TTCCCTCTGGTCTGATTTCTACCCCAAACC-------AAGAAAATCAAGCGGTACC---TATTAGCTCACTGTT----AACTCCACAGCAGACCCTCCACTAGGGGAATTAATAGAAAAACAACCGCAATAAacttcacttaatctttatagatacacattaaaaa-tattaccgctattgtacagctatgtaaaaagaggctcagagagtttaaccaacttgccctaaagttatcatattgccaactgatggagagatagaattcagactcagatttAATTTTTCCTGTGCTGAGATAAAACCCAGGGCCATTGTGAGATGAGCCCTAGTTCATTACCATTGAACTAGGCAACAAGCCCTCAAAGCCAGACTTTTTAACCAGCACCTGACATTTCCACTTGAACCACAGCCCTCCCCGCTTCTTCCCACCTG--CCCCCATTCCACAGGACTCTG-TTGGCCAAGACTCACATTCTCTGGTGACTGACAGTCACTGGCAGTGGGTCTCTCTGGGCTATGGCCATTTTTAATCTTTTTCTTCTTCTTTGCTCCTGCAGGAACACCCGGGCTGTTCTTCTGCTGATACTCTCTCAGCTGT-GGAAAGGAGAACAGAGAGA--AATGAGAGCCATCTGCCTC-ACACTCACAGCCTC a score=3216 s hg17.chr15_random 591022 250 + 784346 AAAATACCCTTATATAC---CATCTGATGTAATGCCACCAACAACTGTACAAGGTGTTGTCACAATCAGTGACTG--AGAGGGATTCATATCATGGATAGAAAAAAAAAAA-------------------------------------------------------------------------------------AAAGAAAGATCAAAAAAGGCAATACTGGAACTTAAACTC-AGTCCTCTGACTCCACGCTCTGGGGTTTTGCCATGAATCAGCAGCTTCCAGGGACCAAAA-CCAGGGGCAGAGGTAGAAAAGCACACATTAAGCAGGCAGGAACTG s mm7.chr2 150249370 326 - 182548267 AAAATACTCTTATGTACGTAAGTCTCATGTAATGGTACC-ACGAGTCTACAAGATATAATAATGACCTCTTAATGGCAGAAGAA---ATGGCATGGCTAAAAAGGTAGTAATTgggttgggaatgtagctcagtggaatacttggctagcattcaagaggccctaaattccattccagcaACATACACACATGCCCATACACATACACACAGAGGCAAACACGGAATCTAAACTCAAATCTTCTGATGCCCTGCTCTGGGGTTT------------GCAGCTCCCAAAGGGAAAAATCTAAAGGTAGAGACCAGAGAGTAAACATTTAGTTGGCAGGAATTG a score=9232 s hg17.chr15_random 591298 458 + 784346 TCCTCACAGGTCTGCTAGCGTGAAGAAGCGTACCAGTACCTCTCACACTTTCATATCAATGTGTCCTCATGGCAGAAGGC--AGCTTTTCTATTAAATCTGGGAATTTATCAGAAAGAGGACAACCCAAGCCTCATTTCAGAG-CGAAGTCTGGTATACGCTTGGAAACCTATGTGTCTGTCATCCCCAAGTACATTAATGCAT----TTTCTCAAGAGAATCAAGGGAAAATGATGCTTCAGAAA--------GATGTCCCGCATTTATCCTGTGGCACTCAAAGTACCCCAGGTTGAGACGATATGACGAC-TATCAAGCTGTCAAGTTCAGTTTCCCCAGATCTATTCCACAGAAGATGAGCAAATCTCACTTCAGAGNCCACTGACTGAANGGCAGTCTGGTCCCAGAACCGTGG---------------------AGACTCAGAAAAA-ATGTTAAAGTCTCTCTGGAAGTAGAAAGCCT--GGAAAAACCAA s mm7.chr2 143567563 468 - 182548267 TCCTAACACATTTATTAGAATAACAA--CACACCAGTACTTCCTGAATCCACATATC---------CCACGGGGAGAGGCCCAGCCTT------AGAGCTGTGGG---AGCAGAAAGGGCACTGTCCAAGCTTCATTTCAGAGACAAAGTCC-TTATAATCTTCCAAATACATGCAAACTCCACCCCTAACTCCATTAATATGTATCATGTCTCTGGAGAATCAAAGATAAAAGCTGCCTCAGAAATGCCTCATGGCCTCCCCC-----CCCCCCGGCTCTCTCGGCACCTCAGGTTGAGATGATCTGGGGAAGTTTCAAGCTGTGAAGTTCAGTTTCCCAGGAACTACCCCACATTATAGATGCAG--TTCATCCCAGGGAGC-CTGACTTGG-GACACTCTGCTTCCCAAGTAGTAGGGAGTACAAGTGCAAAGTTCAAGATTCTGAAAAAGACTTCAGAGTCTCTCTGGAGAGTGGAAACCTGAGGAAAAGCCAA a score=20828 s hg17.chr15_random 592600 677 + 784346 GGACCCAGGTCCTGGGAGACGCAAGCCCAAAGAGCCCAGGGAGGTTGGGCTTGGGGTGGCAGGAGGTGAGAGCTGATTATGGAGCAGGGAGCCCCAGGAGTCACCTGCCCAAAGTCACCCTGGGGTGATTGGCAAGGGCAGGGACTGGGCTGCTTGCTGAAGGGGTGGGGCTGACTGACTAGGCTTTGGTTGGGGGAGCCCAGAGGGGCTGGGGTTGGGGGGCCCCATCTGGTATGCCTCAGGAGTGGTATGGACTCTGG-CACAGGTCTTGTCATCGGAGGGGATCTGTGGCTGGGTT--GGGGGCCATGACCTGGTGTGTTTTACCTTTTTCTTGGCTGCGGCCAATTTCCCCTGCTGTGTTTTTTCTGACATCGCGGGGTGGGGAGGGAGGCGGGGTTGGGGCCACATCAGCGAAATACCAGTGAGCACTGCTCAATGCCTCCAGTCACCTACCAGGCAGCTGTGCAACTGAGCCACAGGTGGCGTAACCAGGGCACCAATGGAACG--CAGAATAGGGGCGTGGCCTTAATGCTCCAAGCCCATTGGTCAGTGAGAAAGATGAAAGGGAAAGGAGGCGTGGCCAGGCAGCAGCATGTCCAGAGGGACCTGTGGCATC-ATAAGGAAAGCTGCCCATGCAACCGCTGTCCC------CGCCCACTCAGAGAAAGGGGAGGGGCCGC s mm7.chr2 150252270 647 - 182548267 GGACCGAGGACCTTGGAGAC---------AGGTGCCCTGGGAGGTCTGGATTGGAGCGTCCGGAGCCGGGGGCTAA------------GAGACCCTGT-GTCAC-TGACCAAAGTCACCTAGGGGCGACTGA-GAGGGCGGGGGCTGGG----TTGCTGAGGGGGCGGGGCTGGCTGAGAAGACTTCA-CTGGGGGAGCCCAG-GGCGCTGAGG----GGTTCTTCTACCCGTGTGTCTCGGGAAAGACTCGGACTCTGGTCATGGGTCCTGCCGTTGGAGGAGCTC---GGGTGGGGTCAAGGGGCCGCGACCCGGAGCGCTTTACCTTTTTCTTGGCCGCAGCCAATTTGCTCTGCCTGGTTTCTTCCGACATCCCGGGGCGGGGAGGGGGGAAGCGGGGGGGCCACATCACCACGATCCCGGCAGCCACCGCGAAACTGCTTCCGGAAGCTAC--GGCTTCTCTACAA--GGGCCAGAGAAGGCGGGTGCAGAGCGCCCCTTGGACGCTCGGAAACCCAGCGTGACCTACCTTCTCCAAGCCCATTGGCTGATGAGAACGATGAAC-GACAGGGAGGCGTGGCCACGCGGTCGCGAGGCCTGAGCGACGGGTGGAGTTAACGACGAGAGCTGCGCGCGCAGCCATGACCCCTCACAGCGGCCTATGGGAAGCAGGGGCGGAACCGC a score=8008 s hg17.chr15_random 596342 468 + 784346 ATCCTACAACAATAGTACCTACAGTATAACATGCCATCACCGCCCACAGAAGGAAAGCAACTGGTGCCCTCGTCACGTTATGTTGTTAGTACTTGCTTACATGATGTCCCTCCCTGACAATCCCTTCCAACCTCTGTCAGCCTCCTTCCCCACAATCACACACACACACAAAACCACACTGCCAGGAAGGGAAGCCATTGAGTG--AGTATTGTGAATCCTACAAGTGGCTCTGTAGTTTAAAAGGGCAATGCCTGTGCCTGAAGAAAATTTGTCTTTAGCTTCATCAGGTGAAGAAAATTGGTTTT---ATAACACAAGGCCCAC--CAAACCAGAAAAGCCCAGGAAC-GCTTCTCCACAGGACTCACTTAGCACGAGAAATCACTCAGAGCAAACTGACGCACACAGTATTTGTCAAATTTTTCTTTTTCATTTAGCAGAAGGTAAGGTAAAGGACTACAACTGAAGTTAATA s mm7.chr7 70457109 395 - 141766352 ACCCTAGAACAAAAGTAT-----GTGTAGCATGTTACCACAGTCCAGAGAAGG-----------TGTCCTGGCCACCCGATTTTGC-AGTATTTGTTTATATTATGTAACTAACCAATAA---CTCCCAACTTCTGTCCACCTCCTTTGC-----TCAC-CACACCCACC-----------CCAGAAAGGAAA---ATTAAGCACAAAGACTGTGAGTCCTG--------------------------AATCCCTGTGCCTTCAGAATATTTTTCCTTGGTTTCATCAGGTAAACGAAGCTGGGTTTCATACAAAGAAAAGCCAAAAACAAAACAGAAAACCCCACACACCACTTGTCCATGTTATTCACATAGAAAAAAAAA---------GCAAAATGCCATGAGCAGTAGCCTTCAAAGAAAAATTTA-AGTTTAACAAATGTCAA-----AGAAATACAACTAAAATTAACA a score=18038 s hg17.chr15_random 596821 1422 + 784346 AGCCATTTTGATCATTTGTCACTATAAATGATAGACATTTAAGCTAGTTCCATCTGGGGAAGTGAAACAGAATCATGTTCATATAATAAGCCAGACGAACCAAATTCAGTGGAATACGTGCACCCAAAACTGGACCAGACTTGTACTTAATGCAGCCTGCAAATCCCCAAGAGTCCACGACAGAATACAAGAACAGTAACAC--TGGTTTATCTCA-ACTCATCTT----------AGCTCCCTCACAAACTTGCCAAT-AATGACCTTTCAAGAACTGCACCGTTGGTCCTCATCTGGGCAATCCCGTGGCTTAGAAA----------AACTGAATAAAGTGCTTCTTCGAAAAATAAAACAATGCGGGGAGGGGGGAGTAGTAACAAAAAA-----------------------AAAGGCACACTGGTTTTTA---CTGCACTGAAGCAATAAATTCTCCAACTAACTTCATTA--ATGAGTATCAGCAAAGAATGAA-CACCAAAATACCGCTCAATCCAACTTTCATCGTGAATTCTTGAATTCACAGTAGGATCATTAAATGTGACGGTATCACTCTGCTATAAAAACTATTTCCAAAACAAA-ACAAACCTATCTACCCCCTTTCTTGATTTAAAAAAAAAAAAGAAGGAAAATTTTGAGGGTTTTTGCTTTTTTCAACT---TCACATACCGGTTTGCCTTTGCAAAAAAAAAAAAAAAAAAGTTTAGTCTCAAAGT---------ATAGCT-----GCAAGGTGGACCGGCTGC---ACGGGTCCCAGAGGGCCGCTCGCCTCCGACGGTCGCAGTTTCAGCCGGGCCGCGCCCGCGAGAAACAGCGGAGAGGCCCCAGCAGGCGGGCGCCGCCGGACAGGTTTACCGTCCGCGTCGGCCCCGGGGAACCGCTCCCTCGCGC--CCGCAGCACTTGTTCGCGGCGCGGACTCCACACCGCGGCCGCCCGCCCCAGGGGAGGAGTGAGTCCGCCCCAGC-GGCGCCA---ACCCGGGGACCCGGGG--CAAGGGTTCGGGGCCATccg--ccgccgggcgcgccccccATCCGGAAAGCGGCGACGGCCCCCAAGTTGGGCTGCGGAGTGGGAGGCGCGCCGAGCCCCAAGCAGACAATGCGGGAGAAGGGTGATGCGCAGGGAGGAGGGGTCCGCAAAGCTGAGGTCCCCGCGCCGCCCGGCTACCCATCCGTGCCGCCCGCCCCTGAAGCCCCGCGCAGCCCCCGACCCTCCTCTGGGGCCCGCCCCACCGAGCGGCCGCAGGGGACGGGCCGCGCTCCGCACCCCGACCCCTCCTCAAATCACAAAACTTCCCCCAACTCCGCCAACTAAGTTGCGCTCTCACCGTGCGGCTCCCGGGGGCTCCCCCGCGGGGCCGAGCCCGAGACAGCTCCTCACCTTTCGCCGCGGAAAAAAAGACAATAGGCTGCCTCTCCCCCCGGCGGCGGCAGCATCGGCTGCGGCTAAAGCGGCGGGCA s mm7.chr7 70457534 1200 - 141766352 AGGCATTGTG------TTTCAGTATGAATGATAGG-----------GTTCTCTCTTGGGAGCTAAAACTGAATTACCATTACAGCGCAAGTCTAGTCAACGAAATGCAGCGGAATG----------------------------------------------ATTCCCAAGAG---ATGATGGTGTACAA----AGTGACACACTGGTTTATCTCAGAGTCATCTCGACTGATAGGAACTTCTTTACAGAC-----AATGAATGCACGTTCAAGAACTGGAGCGCTCCTCCTGACCCGGGCAATCCAAAAGTTTGGGGGGTGGGGGTTTAAATGAGTAA---GTGACTTCGGGAAATCA---------------TGAGGGTAGTAACAAAAAacagacagacagacagacagacaAAAAGGCACATCACTTTGTAAATCTGCTC-AACGCAATGAACTCTCAAAATAACTTCATTATGAAGGGGAAAAGCAAAGACTGAAACACTCAGAGATTGCTCAATCCA-TTTTCATTGTGAACTCCTGAGTTCACAGTAGAGTC--TAGA-----------CACTTAGAGTTAGCCAATATTTTCAGCCGAAAGACAGACA----------CTTTCTTAGCGAGAAATAAA---------------CTGAGGGT----GCGTCTCGCACCCCAGTTAAGTGTCAGCGAGCCTATTTACGAAAAGCAGTGATTC-GCTAGTTCTCAAAGTGCTTGCACTAGAGCTCGAGGGGCAGAGGAGTCGAATGCGCCACCGTTCCCGGGGCGCCCACCGCGCCC-----------------CCCTCCCCATCTCGGGAGAAA----------GCCCCCAAAGGTGGCCGGGGCGCGCAGTGTTTACCCGGCTTGACTGCCCCGGGGAGCTGCTCGTTCCCGGAGCCGCACTCTCTGTTCGAGCGGCGCGCCCCACCGAGCAGCCGTCC--CTCAGAGGAGA---------GCCGCAGCCGGCGCCACAGAAGCGGGCAGCAGAGGAACGTGGGTCCGAGGAGGCCGGGATCGGCGGCCGCGCTATCCA-------------------------------------------------------CCCCTGGCTGCCGATGCT---------------------AAGAAGGGTCCGCCA----------CCCGCGTCGCGC---------------CCGCGCGTCCCCGCGTCCC---GCAGCTCGCGC------------GCGCGGCCGA--GAGCAGCCGAGGGGGAGGGGCGGCTGCGCGCGC---GCCCCCTCCTCAGACGCCCAAACTTCCCTCAACTCCCTCAACTAAGTTGCGCTCTCACCGTGCGGCTCCC-CGGGCTCCCCCGC-GGGCCGAGCCGGAG-CAGCTCCGCGCCTTG-GCCGCGG--AGAAGGACAATAGGCGGCCGCT-CCCTCGGCGGCGGCGGTGACGGCTGGAGC--AAGGAGCAAGCA a score=56392 s hg17.chr15_random 598354 1606 + 784346 TCCTACACAATTCATTTACTTCATTTGAATGTTAGAGCCACttatgtttatttgtgtttctaatttatagtttaaatttatttgtgtttctaatttataatttaaatttatttgtgtttctaatttatagtttaaatttatttgtgtttctaatttataatttaaatttatttgtaAAAAGTTAAATGAGAGTGGGTCTTT----------CTCTCATGTTCACTCTGGCATCTTTTAGCATTTTTTT-----------AATTTGATAATTATAGGACGTTAGCATGCATATCGAGTTTGCCCTTATGTGGTGGGAGTTCAAACACACAAAGACCCACTGTATGCACACAACTGTTCTTGCTGGTTTGGGATAGGCTGCCATGCTTTTTTAATGTTAGTACAGCCTGTATATTCATTACGGAATTCAGATAAAATTTCCTTATGTTCTGCTGTTATGTTTGATCGAATCCTAATCACAGTGAGCTCTTCATTAGCTCAATATGTGGTTTGCCCTCAAGT--GCGCGGTCTATTACTTTGTAATATGCCACTGTGAGTACTGACATTTACAGTTGTTTAAAGGTGGAGCACTGGAAACAGCCTTTCCCCCTTTTTCTGTGTATTGGGGATGGGAGTAATAACATTTTGGGGAGGTTTTTAAATCTCCCAGAAGAGGAAAGTGGCCTGCTTTGGCAGGTGTGTGCAGGATAGAATATGT---TTCATTTGTTCCGGTG--CCAAGAATGAGCGCTGTACTACGGTAGTTCCCTTAGGATTTGTATGTGCTCTGGGCTCATGAAG----ATACTGCCTCATGAGCTGTGGCA-GTTGTACTCTTTTTTGATGACCTGAAAAGGGATTATTTCTGAGGAATGAAAGGCTCCCATCA-TGACTGTGGATGTGGAAAACCTTTTCTAGCTGAGAGCATTTATATCTACAATACATTTTAAAGTCAGAGTTCATGTTCCCTGTTTTAATCACATGACTACATGTCCCAGTACACAAAAGGGCACTGGTTGGCGTTCTCCTTAATGTATTTAGTAAAGATCAGAAGAAATCCTTTAAGAGTTTA-AATGCCCCTGGAACAGGCATATACAGGCTCTAGTCAAGAATGAATTCGAGTGAAGGAAAGCTGTGTGACACCTGGCATTCCTCTGTGTTCATGGAGCTTATTTGAGGCTAGAAGATGGATTTTACCATCTAGACCTCTCTGGCTAATAGCTAGTCTTCAACCAT-------CTGACATAGGAATTTACTTCTTTTCCTTGAATGGAGAACACTTTAAAAATAATAACAAACATTATTATAAACTAATATATGTGAGAGTACTTAGTTGAAACAAAAAGGAGTTTTAGTAGACAGTATTATACTACATTTGAAAATCAAGGAGCAGTTTATGCAACGTAAAATGTTTACAAACTGCAGCGCAATCTACTGTTTGTGACTGTCAAAGTGTCATGAGGAAAGTGTCTATACAATCACAGAGTTATATTTCCTCACAAAGTTCTTTACAAAGAGTGAAATATGTTTTTATACCTCTCAGTTTCAGTTAGAGGCATATTTTGTGTAATATTTATG-----------GCTTAAAATGGACTAAAGGTCCTGTTCTTGCCTTG---------------------------------------------------------------TCTGAACTTGCCGCTTTTGCATTCTT s mm7.chr12 4608705 1584 + 117814103 TCCTACACAATTCATTTACTTCGTTTGAATGTTAGAGCCACTTGTGATTATTTCTAT--------------------------------------------------------------------------------------GTGTTTCTAATTTACAGTTAAAATTTATTTGTAACAATTTCAAGGATAGTGGGTCTTTGTGTGGCTTTCCCTGCTGTTCTCTCTGGCATCCTTTAGCATTTTTCTTCTTTTTTAAAAATTTGGCACTTGTAGGTCATTAGCATGCATATTCAGTTTGCCCTTACGTGGTGGGAGTACAAACACACAAAGACCCACTAT-TGCACA-AACTGTTCTCTCTGGTTTGGAATGGTCTGCCATGCTTTTCCAATGCTCTTGCAAATTATATATTCATTACAGATTTCAGATGATGTTTGCTTATGTTCTGCTATTATATTTGATCTAACCCTAATCACAA-GGGCCCATAATTGGCTCCATCTGTGATTTGCCCTCAAATAAGCACTGTCTGTTACTTTCTAATATGCTACTATGAGTACCAATAGTTAGGTTTGTTTGAAGGCCACGAACTGGAAATAGCCTTTTCTATATTTTCTCTGTAAACCGAGCAGGAGCACTAACATTG-GGGGACCTTGCCTGGTCTCACAGAAGAAGAAAGCAGTGTGCTCTGACCACTGAATGTAGAGTAGTGAATGTAGAGTAGTCTGCCTCAGCTGCCCACGAATGAACGCGGGCCTAGGGCAGTTTCCTTATGGTCT-TAGGTGCTCCAGGCTGCAGAGCTCCCAAACTGCTC--TGGGCTCCAGCACACAGTGCT--TTATTGATGACATAAACATAGACTGTTT-TCAAGAATGGAAAGTTTCCATCACTGACGGTA-AGGTAAGAAACCATCCCTATCTTAGAGCACTTATATCAACAATATATTCTAAGGT-AGACTTTATGTTACCT-CTGTAGTCAGGTGACCACTTACCCTAGTATACAAAATAACACTTGTTGGCATTCA---TAATGCATTTAGTAAAATCCATAAGGAAACCTTAAAGAGTTTGTAGCAAACCTGAAGCCGACATGTA--GGCTTTAGCCAAGGACCCAT---AGCATAGGGAGAGCACACGAGAGCTGGCATTCCTCTGTGCCCAGGAGGCTTCTT--AAGC--GATTATTGATGTTACTGTCTACATGTTACTGGTTAATAG-TCGTCTCCCACATTGGCTATTTTGGCATAGAATTTTACTTCTTC-CTTTGAGTGGAAAGCACCCTAAACATAATAG---ACATTATTATAAATTAATATGTGTGATAGCACTTAGCTGATAT------GAGTTTTAATA--CAGTATTAAACCATATTTGAAAATCAATGAACAGTTTATGCAGTTTAAAATGTTTACAAATTGCCGTGCAATCTACTGTTTGTGA-------AATGTCA---GATAGGTGTATATACAATTA--GAGTCCTACT-CCTCACAGCATTCTTTG-AGAAAGTAAACCATGCTTTTATACCTCTCGCTTTAATTTAAAGGCATATTTTGTGCAATATTTATGTTAATGTGCCTATATATAATGAATGAATTATTACAATCGTGCATTGCCTAAATCATGACTTGAGGGGAAAAAAACAACAGTTTAGTTACAGTTTTACAAAACCCAAATATCTGTACTGGAAACATTCACATTCTT a score=1069 s hg17.chr15_random 599960 198 + 784346 TGAGTTCAGTTTAAAGAC------------------------------------------ACTTACTTTAA--------CTCCATTTTA---------------------------------AACCCTCAGGCT-------------------------------------------------AGAAATCGTACCACTGTTAATTAGCCACGTTATTTGGTCTA--ACAGTTTTTGTTTATCATTCTGAAACTGAGCTTATCTAATACATTGATAAATTATTTCAAAGGTATTTTTATAGTTCAAATCGCTTCACTTT--TACCCTGACACGTA s mm7.chr12 4610406 333 + 117814103 TAATTTCAATTTACAGATGGGTAAGAGAATTGCCTGCAGTCACTAAATGACAATGCAAAGACTGATTTCAAACTGACTTTTCCACGTTATATAGATCACCTGATTTTTCTTTTTGTCTCATCAACATTCTGCCTTTACCTCCTTAAATGCCACGTGTGGCCAGCTGCTCTCTATGCTGAGCTCAGAAAGCCAGCC-CCACTAACTAACTGCATTGTTTCATAAAGTACCTTTTTTCTTTATAATTTTTATTTGGGGCTTCTCTACTATACTTATAAATTTATCCAAAAGTATTTTTATAGGTCAAATCCCTTGACTTCGCCATCATGAAAAGTA a score=35463 s hg17.chr15_random 600158 1063 + 784346 TAAATGACTAGGAATGACCTTCAGATAGCGTTTAGCAACTGTAACCAATCTGACAATAATGTGTTCATCAGGTA----CCTGTGGATTAAATCACATACTGGC---ATATTTAAGCTGAATGTCAGTCTGAAAAATAAATGTACTATATTAACTCAAATACCACTCTCTGTGTAGGTATTTTGTCATATGTTTAAGAAAAAGCT-----AAAGAGAATGGAAATCCTATGACAATAACTCAAGTCTTTCTTCAAAGTGCATGCAGTCTCTTGCAGTACCTCATTCAGCCAAGTATTTGTTCTCTTCCTCATTCAGTATAAGGCAGCTTTCAATTTGCTTAGAAGGCAATATTAGAAGGTTAGAGTTCAGCAGAAAGAGAGAATTTTAAAATGTGAGTTCGACTGAATAAATTTGAATTTCTGTAGGAAGTAAAGAATCAAAATACCTATTTAAAGACTGCAATATATGATAATTATTTTTAAAGTAATAGATTAAACCTGATAGGTTTTCCTGAAATGAAAAACAATCAGTTCTAAAACCAAAGCTGAT-TTTTAGAAAATGTGAAAA-TGTAAATCAACCCTATCCAAAATAGATTCTCTAAAACTTTATCTTACAGTCACTTTCAAATAACTATTCAAAAATGTAACTGTTAAATTAATGTCttaaaataatttaaaacattttaaaataCGA----ATACTGTAGCTTAAAACAAAGAATCTAGGG---GAAGGAAAAGTAGAGAAAGAAATGCCAATTCCAGTCCAAAGCTGTATTTGCCAAGTTTTCTTAGAACAACTTTTACCGATTTATGAATTCTTATACACAGAATGCATGATGGAAATACTGA---TTTTTGTCTAAAGTGGCATTATTGACTGCTTCTGTGATGCTACTGTAATGTAATAAATTATTAGATTATTTCAAGGTGCTGT-TTTGCCTAAAA-----ATTTTGTGTGTCTTGAAAACTATAGTATTAAAGGTATTGAGACTGTGCAAATGCTGGGCATGCTTGGCATGAGATAATCGGTTTTTATTCTTACAAAATTG-----TAACCATATAAGTGTGTTTATTAAAAGAACACAAACT s mm7.chr12 4610898 998 + 117814103 TAGATTCTTGGAACTGGCATTCAGGTTGAGCTCAGCATCTGCAATCAGTCTGAAAATA---TGTTTAACAGGTAGGTGCCTGCGGAGTAAGTCACATACTGGCCCAACAATCAAAGCAAATGTCAGTACAGCAAGTAAACTCACTGTGCTAAC-CGACTACTACTCT------AGGCATTTCATCATAC--CTGATAGAAAGCTGCAAGAAAGGAGATGAGTGACATA---CAATCGTTTACATTGTTCTTATAAGTGCATGCAATCTGTTGCAATCCCTCATCCAGCCGTGTGTTTGCTTTCTTCCTGATTTAAAGTAAGGCAGCTTCTG--TTGCTTAG--GACTTTCTTGGA--------------------GACATAATTTACACATTAGAACAC-AGTGGATCAACTTGAACTT--GTAGGATACA--------------CCAGTTTAAGAGCACACTGTGTGACAGGCATTTCTAAAGCATGCACTTGAACTTGATGGGTGTTCCAGCAGTGAAGAAAAGGC-----TATAGCCAAAGCTGTTATTTTAGAAAATTTAAAACCTAAAAGTTAACCTTATTGATCATATACTTTCT----CTGATTCTTTGAGAAATTTTGAAATAA-----------TGTAATACTTAAA----------ACAGTAATT------GTTTTAAAATACAACGCGATACTAGAGTTCAAAAGAAAATGATTAGGGCTGAGAGAAAAGGCAGAGAAAGAAATGGCAGGTCCAGTCCAAAGCTTTATTTGCCAAGTTTTCTTAGATGAAATTT-ACCAAGTTATGAGTTCTTGTA-----AATACGTAACAGAA-TACTGAGACCCTGTGCCTGAA-TGGCATTATTAgatgctgctgtgatgctgctgtgatgTAATAAACTATTAACTTGTTGCAAAGTGATGTATTTGCCTTAAATTTTTATTTTGTGTGTCTTGAAAACTATAGTATTAAAGGTATTGAGATTGTGCAAATGCTGGGCACGCTTGGCATGAAATAATCTGTTTTTATTTTTACACAATTGTAATATAACTATGCAAGTGTGTTTATTAAAAGAACACAAACT a score=70897 s hg17.chr15_random 601676 2389 + 784346 CTCACCAAAGCAACTTTTCCCTCAAGGGGGCTCCCATCTTCTT-----ACTCAGAGAGGCAGCTGAGGCGGG----------------------ACAGTGGAGTTAACTGTAGACGAGGCGAGGGCACAGGCTGCTGGGG----GTGGCC--CCCCTTCCCCCGTGTACATACTGTAGCTGTGTAACATTCTGTAT---------------------TGTACC-TAGCGGAGGTTGCAGCTGGCATATGAGGAAGAGGTTCTTATAATTATTCACGGCTGGGAAACTTATTCATTGTTAGCATAGGAGCGATGAT--GGGGGTGGGGATGGCGTCATGGCTCCCTGGTGATGGGACCCCTTttttgttttgttttgtttttttgtttttgttttggttcgctttTGATTTTGGAATAAATGGATTTAGCCATACTGCTCGGCCTGGCATGTTCCT-------------GTTTCCCTCA--CTGG-----------------GTCCTGC-----------AGTTTTTCCCACTCAATGAGGAGCCCCAGAGTGTCTCAGCATGTCCAGCTGGGCTGTGGGGAATCTTCCAGGCCTGTTACCTGTATGCTGCCTGGTGATACCTGGTGGATTTCACGAGGACTGCCATGGCGCCTCTGGAGTATAGTCCGGCCCTGA--GAGCCAACAGGTTGAGAAGCCTGATCTAGCTGTGGTCA-----GGAAGACAGATACCAGTGCCCAAGGGCACTGACTTCCATCCACCCCACGTGTCTTCCATTCCGTCCCCCTGCCTCCCTCTCCTGTCTGCACCGGGTGGCCTGTCTGTCCCTCCAGAGTGCCGGCTGCCCCACAGGCTCCTTCCAGGCTGAGTTCAGGGCCCTGTGCCCTACTGGCCAGAGCCGGCTTCACAGAATAAGAGCCAGCTAAGCTCCAGGGACTTTCCAGGAAAAGTGTCCCTTGAAAAGGGTGTGACCTTTTCACTGCTGCCAA-CAGCACCCTAAAAATGGCTTGGCCTCTTCCCTCCCCTGAGCTCCATAGAGAACACAGCCAGCAGAGG-ACAC---ATTCTCTGTCATTCAGAAATGGGTTT----CTCAGCCGAGGGACAGCAGGACTGGTAGAGACTGTCAGGCCACACAGCTGC--CTGC-ACAGCACCGCCATGCTTGGCCAGAAGGGCGGGAGGGATGGC--GGGGGCTGGCTGTCCATAGGCCGCGCATGTCCCGGAAGCTCACTGGAGGTGGTGCACTTTGGAGGGGCGATGTCAGGA-GACAGCTTCCTCTTGCTGGGCTACAAGACTCCACAAGCACAGCACGGGGACTGATTCCCAGTGCTAGAGGCGAGGCAGT--CGACCACatgtatatgtgtatatatatatatgtgtgtgtgtgtgtgagtttgtgtatgtgtatatatatgATAATTTATAGCTATTTATAGAACAGGGCAGGGGCA-TACCACAGAGGGGGCACAAGTTTTCAGCAACAGTCACACCTGGATGTGTCAGCTCACCACTACAACAGACTAAGTCACAGAAGAAGG---GGGCTGGCTTTGGGGCTGGGGGAGCCACTGTCAAGTCACAGGACACCCACCCAGGCAGGCTTGGAAAGGGAGGTCTCTGAGAAG-AGGAGGAATCTGTTTAGAGGTCGAAGTGGGGCCTGGGGCTCCCCGGATGGGATGGACTTGCCTGACCCAATCAGCTGGCAGTTGGAGAGAAAGCAGAGAGAAAACGGGTTAGAGAAAAGCC---AGAGCTGGTGAGGCAAGTGCAGAGTATGGGTGCGCTGCAGCAGCTGTGGAGGGCCGGGGAGGGGAGGGCGTAGGTGTGGGCAT-GGCAAGGTTCCTGGAAAAGAGGGGCTGGAAGGGAAAGGGGAGGAAGATGGAGGGAGAAGCCGGAGCTTCATAGGTAGTGCCTGGGGACTGCGGCGGCCCTCCCCACCCCACACACGCTGGCCTCTTTCATGGCACCCAGGCAGTCCACCCATAGTTCAGACGAATGCTCAGCCCCCTCGGGCTTCTCTCTTCTCTGGTCACCCTGTCTTCCAACTCAC-GGCCCAGGGCCACCTCTTG-CTTGGGGAGCCCCACCCAACAGCCACCAGGCCTGATAGAAAGGGAACACTGCTTGAACCAAAAATGGTGAAGCTATAAGGGATGGATGACTGGAGTGAGTGCCAGAGGCCCCTCTGGGTGGTCCAAAATCCCAGGGTCCTCTGAAGGGACCCTGGGGAAGGCAGGGAGGGCAGGTAGCTGGATGCCACTGGCCATAGACTTATAAGTCTAAGAGGGGAGCCTCAACTGGTTGGCGGGCGTGGGGCTGCAGGTTGCATAGGTGAGGCTGGGCCCTTCCTGCT-GGGAAAAGCAGAAGAGGGAGAGTCCATGGCAGGAGAGGCAGGTG----------------------GGCTCGCTAGGCGGAGCTCAGCTGG---------GCCAGCAGGCACTGTGGTCCCCTTGGCTGAATAGCACAGGCGACCCCTAGGAGCAACAGGCCAAGGTGTGTGAGCCTGCTGGTCGGC s mm7.chr2 32314830 2302 + 182548267 CTCAGGAAGGCA---TCCCACTTTGGAGGGCTTCCATCTTTTTGAGGCACTTTGGGA--CAGGGAAAGTGGGTACCATTCTCTCAGGCCTTATGACAATTGGGGTAACT--ACGCCAAGC-AGGACAGAGGCTGCTGGGGCAGGGTGGCCTTCCCCTCCCCCGGTGTACATATTGTACCTGTGTACTATTTTGTATATACCGGGGTAGGGACACCCCTGTATCATAGTGGAGGTTGGAGCTGGCAAATG-GGAAGAGCTTCTAATAATCACTTTGGGCTGGGAACCTTATTTATTGGTAGTGTTAGGTCAGAGGGCAGGAGGCGGAGACAAGGTTGTGGC-ACCTGCTGATGCAGCTCCTCTTTA--------------TTTTGCTTTTTACTTGG---------------GAAATAAATGGATTTAGCCATACTGCTGGGCCTAGGGTGTTCGTCATTGGTTCTGGGGTTAGCCTCAGGCTGGCACTGAGCAGGGAATGTGTCCTGCCTGGAGAGAGCAGGCTT--CTGGCCTGTATGGAGCCCAAG---GTCTGAA-GTGCCTGGCAGGGCTGA---------TTGACACCTATCACCTATACACTGCCTATTGAAGCCTAG-GGACCCCAGGGGGAGTACCATGGGGCTACAGGGACAGAGCTT---CCTTACTGAGTAAGAGAGTC---AAGCCTGACATA-TAGTATACATAGGTGGGACTCGGGGTGCAGCAACTAAGGGCGCTGACTTCCAGGC----CAGGCCTCTTACATTCCGACCCTT---CCCCTTAGTCTGTCCACACTAGA-GACCTGTTTTGTTCTTTAGGCTGTT--------CACAG----CATCCTGGCTGAGCTCATGATACTGCCCCCTAGTGGTGTAAGCAGGATTCGTAGGATGAGGACCTGCTAAACTC---------------ACAAGCA-CCCTAGCAAGGG------CCTTTCCTCACCCTCCATTCAGTGCCC------------AGTTTACACCGTCCTCTCAGCCCCAGAGAATACA-AACCAGCAGAGGTACACGCAATTCCCCATGATCCAGAAATGGGTTTTATTCTCAGCCAAGAGACAGCAAGACTGGTGGCTACCAGAGAACTGCACAGCTGCTGCTGCTGCAGCATCCCCTTGCT------GCAGGGTTGG---GATGGCCAAGGGGATGGCTGTTCACAGGCCAGG-AGGACAGGGGGGCTCACTGGAGGTGGTACACTGGAGGGGGG-GTTGTCAGGATGACAGCGTTCCCTTGTTGGACCACAAGACTCCACAAGGACAGCATGGTGGTTGATTCTGA-CACTACAGGCGAGGCTGTGTCAGCCatatatatgtatatatatgtatatataggtat------------------------------------atttatagatatttataGAATGTCGCAGGAGCAATACCACAGAGGGG-CACAAGTTTTCACCAACA-TCACATCTGGATGTGTCAGCTCACCACTACAACAGACTAAGTCACAGATGATGAATAGGAC--GCTTTGGGGCCGGGGGAGCCACTGTCAAGTCACAGAACAGCTGTCCAGGCAGGCTTGGTAAGGGAGGTCTCCGAGGAGTAGGAGGGATCTGGTTAGAGGTCGAAGGGGGGCCTGGGGCTCTCAGGACGGGACGGACTTGCCTGACCCGATCGGCTGGCAGTTGGAGAGAAAGCCGAGAGAGAACGGAAGAGAGAAAAGGAAGGAGAGCTGGTAAGGCAAGAGCA--------GCCACCTCCAGCAG------------AGGCAGGGGCTGAGGCAGGTGTGGATGTGGGCAGGGTTCCCGGAAGAGATGCACAGTTGATGAATGAAAGGGAAGATGGGGTGCTGGGCCGTAAC-TAGCAGGTAGTCTGAGTAGAGGCTGGTGGCCCTCTCT-TGCCACACACAC-GGCCTCTCACACACCACCCAGGCAAT--------------------------GCACCACAGGGCCTCCCTCATTTTTGCTCA--CTGTCTCTCATCTCACTGGCTCAGGGCCACCCCAAGCCTCAGGGAGTCCCATGTAACAGCCATGAGGCCAGA------------AGTGCTTGAACCAGGAG-ATTGAAGCTAAAGGGGATGG----CTGGAGGGAGCGCTGGAGGCCCCTC-AGGTGGTCAGAAAGTCAGGAGTCCTCTGAGGGGACCCTGGGG-AGGCTGGGA-GGCAGGCAGCC-GATGCCTGCGGCCACAGACTTATAAGTCTAAGAGGGGAGCCTCCGTTGGTCGG-------GGGGCTGCAGGTCTCGTAGGTGAGGCTGGGCCCTTCCTGCTGGGGAAAAGCAGAAGGGTGAGCGTCAATGGCTGGGGAAG-AGTTGGGACAGGGTAACCGAGATCTGTGGCCAGCCAGGCAGAACTCAAGTTGACTTTCCCAGTCAGTAGACAATGCATTGCCTTCGGCTAAAAGGCACAGGTCACTCTGAA----AACAGGTCAA-ATGTTGGAGCTGATGGGCTGGC a score=9079 s hg17.chr15_random 604400 602 + 784346 GTGTGTGGGTCAGGAGCAAGTCGACAGGCCCTGCTCCTTACCCCTTGGAAGGGACTGCCACCAGGGGCAGTTCTGACTAAGGCCTGGGAACCCATGACTCAGAGCGTGGGTCCCCAGG-TCTTGCTGGGCCAGCCTGGCTGCTGCAG--ACAGACAGGAAGCACGTCTGAC--GCTCCTCCACCCTCGGTCAGCACAGCGGGGCTGGGACTCACGCTAGCCTTCCCAGCAACTTGCTTTCCTGCGTGAACTCTGGCAGGCTGCCCTCTCTGTGCAAAGCCATAGCTGGGGCCTGCTTGGGGCCCTCTCCCTCTTTCACCTGCTCAGAGTGGCCTGGAACTTGGAGGTGGGCAGTCGGCGCCTAGGA-------TGGGCctgtgtcactagggcatgtgtccttgggccagttacttcctcttagggccttgggctcctcctctga--gaatggggcgtgttggTGTGAAATGAGGTGAGCATGTTGATTTGAGGAGCAGCAGGACA----GACACCTGCAGGCAGCCCCCCTGGCCACATTCCCCTCCCTCCCTTC-----CAAGTCCTGGGACAGACGCTCTTCACCAA-GGGGTTCAGCCTC-TGATGCTCTTTCTTGGTCTCAG s mm7.chr9 33998093 560 - 123828236 GTGTACGAGTCTTGGGCAAGGAAAT-GGCTCTGCTCCC--ATCTTTGTGAGGAGTTGCCAT-GGGAGTGGATTAGGCAAGGTTATAGGAAGCCATTACTCAGAG--TGGATCCCTGGGGCCTCTTTGGGCCCACGGGGCTGTTGCAGGCACAAGTAAGCAACAAATCCAATAAGCTTCTCCACCCAC----AGCATGGTAGTGCCTGGACGCACACAAGCC--ACCAGGGACTTGCTCTCCTGAGTGA--CCTGATAGACTGCCTGACTTTGACCGAGCCATG---------TACCGGGAGCCC--------------------AGAATAG-----------GAGGTAGGGGTTCAAGGTTTAAGAGCTATACTGAGCCTGTACCTCCTAGGTATGTACTCCTGGGCCAGTCCCTTCCCTCCA---CTGTGACCTTCTCACCTGTTTGACT--------TCAGGATGAGATGGCAGGAGCATATGGAACCCAGAGCTGGGTGAACATCTTGACCCCTGAGAGCGCCAACCCCCACTCCAGTCTCCCCACTCCTAGGTAGAGCAAGTCACAGGACAGGCGTAA--CACTGACTGGGTCCACCCCCCTGATGCCCTTTCATAGTCTCAG a score=2192 s hg17.chr15_random 605329 314 + 784346 GGAGTGATTTTCAGTGGTGTCCTCTCCATCCCCAGCATACACCCAGCCCTGAGTGGCCGCGGCTGCCACATGCAGGCTCCAGGGCTACATTTGCCTTTCGTCCAGGGTTGTCATACGCTGGAGAGTAGAATGTGAGAGGTGACCCCTGTAGGCTGCAGGGTGGcccctctgaaccttagtgtcccccacctgtagaaggggc-gtaacaCCTTCCAGGGGGAGGGCTGAGGAGGAAATTGTCAACGGCTGAGTCTAAGGCTCACAGCCAGAGGCCAGGATCGGATCCAGGGCTGGGCCTGGGCCTGGGAGGACAG s mm7.chr9 33998653 213 - 123828236 GGAGCGACTTCCAGTG------TGCCCAT----------------GTTCTCAGTGGCCGAG---------TGC---CTTCATGCTTCCACGTGCACCTC---------------ACTCTGGCAAATAAAATGGGACAGGTGCCCCC------CTG---------------GAACCTCAGGGCCTCAAACTTGGAGGAGGACCCATAATGCCATCCAGAAG-----------------------ACTCCTGAAGAT--GGCTCACAGCCAGAAGGAAAGGGCAG--TCAGGG----GCCTAG-CCTGGGAGGAAGG a score=2891 s hg17.chr15_random 605680 41 + 784346 CCAGGACCCTCTTCAAAGCACCTTCATGCCCATCTGTTCCC s mm7.chr9 33998892 41 - 123828236 CCAGGATCCTCTTCAAAGTACCTGCATGCCCAGCCGCTCTC a score=31712 s hg17.chr15_random 606083 1254 + 784346 TCAATCCCTGTGGAACA--GGTCTCTGAGGACCACAGAGTGGGGCCCCAGGGAAGGCTGGGAGCCTGAGCTGAAGG-----CAGG--CAGCAAGTAAGG---------------GCCAAGCTGTGCC-CCTGCCCAGAAGACCTTCCTGCCCCCAGAACCCCACCCTCTGCAGACAG-GCCTCCCTGGGCAGCAGCCCCCCGGCTTCCGAGGCCTTCCGTGCCT-CACCAGATGCCATGCTCT-CAGGGACTC---GTTTGCTACGCTGCCCCCTGCAGATCTGCCCC-AGAGGAGCAGGTGAAAAGCCGC----------GCCTGCCGA--GGTGCTGCAGCGGTGGAGTTTTGGGCAGAGG--GGTCGGGGGAAGAGTTTCTCACTTTTAAGATTCCCCAAATCCAA-GATGAAGTCACACTGTGCTTTAGAATGGTAGATGCTCATTTATGTAAAATCATAATAAATGTTACACAAACTGTTAGAATAAAAAAATACCTTTTTCGAGGGGGA-GGAGCTCCCCAGCCTGCCGCTGGGTAGTGAGAGGGGGTTAGCACCATTAGGGCGT-AGGGGTCGGGAGCTCCGCCACAGCCCGTGGTGGG-CACTGAGGTCTGTC-------GGTCGGTCTGTGCATCCTGGCACTGTC-----------AGTGGCGGGTGACCCGCTGATGGCCTCGGGAGGGGGAGCCGTGGCTGGGCGGAGAGCACGAGCGGCAGCACTGGGTGCGGACGGTGGGCAGCTGGCAGCGGCCCAGTAGGCGCAGTGTCTCACAGAACCCGAAGGACAGGCGGTCCCGCTCACAGCCTGGAGTGGGG-GGGCAGAGAGGCA--------------TCAGAACCAGTGGTTTGGGGTACCCAGAACCTGGCT----------------------------CCCCACCCCAACCACCTCAAGGAGGCTCCAGCAGCTCCCCACCAAGCAGAGAGCCCCAGTTTCTGGAG--CGGCTCCCAAACTGGACTTGCAGGTCTCCAACTGTTGGTGTCTCTGTCCCACCTACTCACGGCCGACCCCAGGACTCGAGAACGGGCGCTGCTGGG-CTGAGGTTTCTGGAGGAAAGGTCCTGAGACCGCACCCTG-ACCCCCTCACATGCCTGTTAAAGAGCCTGCCCAGGGCGACG----CCCTGCCATCCCATCTCCATCCTTGCTCACCCCTGGTGTTCCCCGACAGATCCTGGCACAGAACTGCGGTCCCGGGGCCTC-----CTGCCAACCTGCAGCGGCCTCTGCCCCCGACTCCCGCCACCGCCCCCTGCCCCA-GTGCATCTGTCCTGCCAGGCCTCCGTGACCACCTCCAGCCACAGGGGCTGTACACAGCCTC s mm7.chr9 33999020 1275 - 123828236 TCTATTTCTGTGAAACACAGGTCTCTGAGGACC------------TTCATGGAAGA-TAGCAGGCAGAGGTGAAGAATGATCAGGGACATTGAACAGGACTCCCTGGATCTCTTGCCAACCTGTACCTCCTGC---AAAGACCTTCCTGCTCATACCATGTAACCCTCTGGGGATACCGCTTCCCTAGAAGCCACCTCCACCGCCTTCAAGACCTTGCGTGTCTACATTAGGC----TGCTTTTCATGGCCTCTGTGCTGGTTATGCTG----------ATTTGCCCCCAAAGAAACAG---AGAAGCTGCTGACTGCTCTGACTTCCAACAGGGGACAGGGTAGTAGCCATTTGACAAGAGGTGGGTAGGGCGGGG------TCACATTGGAGAGTCTCCAGATCCAAAGACAAGGCCAAACCA--CTCTGAAAGGGTAGATACTCATTTATGTAAAATAATAACAAATGT---GCAAACTGTTAGAATAAAAAAATACCTTTTCTGAAAGGAAAGGGGGTCCCCAGCCTGCCACCGTGCAG--GGGTGGGGTTAGCACCGTTAGGGCACGAGGAGCAGGGGGCTCCACCGCAGCCTGTGGTGGGGCACTGAGGTCTGTGTGTCAAGGGTCAGTCTGTGCATTCTAATGGTGCCTTCCTCGGTTTACCGTCTGGCTACCCGCTGATGGCCTCGGGAAGGGACACCACGACTGAGTGGGGGACATGAACGGCAGCACTGAGCGCGGATGGTGGGCAGCTGGCAGCGGCCCAGCAGGCGCAGCGTCTCACAGAAATTGAAGGACAGGCGATCCCGCTCACAACCTGGGATGGGAAGGGAAGAGAGGAGAGGAGGTGCAGTGGTCAGAATCAGTGGGC-ATGGCCTCCAGAACCACACTTTGTCACCCCGTGATTCAACTGAAAAGCCCCTTTCCCTATTGCCTTAGGAAGAAT--AGCA-------ACCAACAAGAAA--CTGGGTTTCTGAAGGATAGCCCCAGAATCAGAACCCCAGGTCCCCAGCTCTTG---TCCCTGCCTCACCTGC-----------CCTTGAACT-----ACTGACAGTGTTGGGACTTAGCTTTCTGGAAGAAAAGTTCAAAGACCCCATCCTTTACCACCTCAGAAGA-TACCCAAGAGCCTACTGGCAGCGATGTAAACCTCTCGGCCCCATCTTTCTCCCTGCTCACCCCTGGTA---CTGGACAGGATCAGGCCCACCACT----TGTCAGTGTGTCAGACACTGTTAATATGCA------TCCACTCTACAGTCT-GCCACCTCCATTGGTCCCACATGCCTTTG--CTGTCATCACTGC---CCCACCCCCATACACA-------CACACACCCTC a score=20643 s hg17.chr15_random 607364 1197 + 784346 CAGGCCAGCCTCCCACTTCTCAGGTGGGCCAGGAAGCCTAGAGAGAGTG----------GGCCCTACAGGCTGTCAGCGGAAACCAGGGACTAAGCCCAGGCCCAGTGGGGAGGG---------AGGCCGGCTGCAGGCTGTGCTTGTCA-GGGCTGAGGCTTGGCTGGGCCCTCCTGCCCCGTGGTTATCAGAGCTATTTTGGGAAGTGGCTTGTTTCCAGCCTCCTGGCCTTGCTCCTGATGCCACTGCC-----------ACTGCTGACAGCCCCCACCTGCCGCCTGGGCCCTGCTTACTCCAGCAGACCTCCCTGGGGAGGAAGAGCAGGAGGACAGCAGCCAGCCCTGTGCCAGGGACATCCCTCAGGCCCGGCAGAGGGCACGAGGCAGCAGGCAGGCTCCTCCACCCCAGC-TCCAGGCAG-AGCTCCAAAGTGCACATCTGCAGGCCTGCATCCTGGTCGCCCGGGgtgacctcagacaagctgcttcacctcttgggccttggttccctcctctgtcaaC----CCCACCTCCACAGCAAATGG-ATGTGGCC--------ATGCTGTGTCACTGCAGCGACTGCACACTCTGGAGTTTCCCGGCTTTCCCCCTGTCCCGCC-AACTGTCCCACAGACCAGCAAAACATCCTGGGAATTCCAGGT-CTCAAAGTCCAAGACACCTTCCCAGCTG--CCCCTCCACT-----------------------GTTCACTGGTGGCA---GAAAACTCCTCACTTGGGACAGCTTCTAGTTCAGCCACCTAACCAGCCCCCATAGCCCACTCCCTGC--AGCCCACTCATACC-CGCCCCTGGGAGACCTTACAAGCCCAGAGCCTCCTGGGCCATCTGTCCTTGGTTCTAGGCCCCCAGGGGCCTCAGTTCCTGTTCTCTGCTCCATCTGGTCCTCATCCCCTGGGATCATAACCACCCCACTCCCTGTGGCCAGCTCT-----------------------------------------AGCCATGAAGGCGAGAGATGTGATGCCAGCACCCAGCTCAGGCAGCACACAGGAGTG-CTCTGAGATGCTGGCTGGGTGCGTGCTGAGGGCAGGCAGGACAGGGTGGGGGCACTGCCACTTGGCCTTGAGGTAATGGGGTTTGTGGCAGGAAGGCCACCCCTGCCAGAGGCAGGGTAGCAAGGCATGGCAGCGAGGCATGGCAGGGGCCACTCTGAGCCCAAATGAGGGCTGCCCAGGAGCCAGC-GCAGGTAGAGAAGGCGCATTGGATAAGGGGAGAAGGCAGACTGGGG s mm7.chr9 34000337 1171 - 123828236 CAGGACAGCCTATT--TTGTTGGGTGGt----gaagcccagaaagttggacttggccaaggccacagagatcatcagtaggaaccaaagcctgggtcaggcccctggtGGCAGGGCACAGGGAAGGGAGAGTCGTCAGCCCTAGTTGTCACAATCTGAGGCCTGGCTGG------CTCTCCCGGG------AAGACTATTTTGGAAAGTGGCTTGCGTCCAGACCCTTGGCCTTCCTCCCAGTGCTACTGCTTTGCTGTTGCTGCTGCTGAAG--CCACAGCTGCC--CAGACCCCTGCTTACTTCTGCAGAT-TCCCTAGGGAGGAAGCACAGGAGGGCAGCTGTGGGCCCTG-GTCTGGGACATCCC-CAGGTGCAGCGGAGGGAACAAGACAGCAGACAAGCCCCTCCACCCTATCCTTTCGGCAGCAACTCCAAACTG---------------ACACACTAGTTCCCCTGGGTGACCTCCAGCAGACCTAAGCAC----TGAGTGAAGGTTTCCTCTT--GATAACAGCCCCCACCTCCCTGGGGAAGGTCACATGACCCGGCATGTGAGCTGCCTTGCCACGGTGATCACACACCCTGGAGTTTCCAGGATTTCCAAATGTCCTGTTGAACAATCCCACAAACCATCAAAACATCCTGGAAGCTCCAGGAACTTGCGATCCTAGAGTCTTCCCTGATTGGCTCCCTTTACTTGAGAGGGGGAGGGTGCTGGGAAGGCGGGTAGGGGCACAGGGAGGCCCTTCACATGGATAGGCTTTGGGT-------------------------------CCCTGCTAAGCCCACCCTTCCCATTCCTCTTGGAGACCTTGCAAACCCACAGCCTCCTGAGCCACGCTATTTCGGAT-----------AGAGCCTGAATTCCTGCCCTCT-CCCTATCTG-----CACCACCTGGGACCATAGCTACCGTATTCTCTG---CCAACCCTGAGCTTGACGAGAGAAACAGAAGAGAGCCATAGACATTATCAGCCCCAAAGGCAAGCACTGTGGTAT-AGCACCCAGCTTAG-CTGTGC---TGAGTGTCTGTGGGAAAAATGGAAGGAG-ATGATGAGAGAGAAACAGGCAGGGATGGCTTAACATCTCCCCGGCATGAGGCAATGGGATT------------------------------------------CAGAGCAGAATGGCAGAGCAGAAGTTGCTCTGGTCCTGAGCCAGTACCACC-AGGAACCAGCTGCTGGTAGTGAAGGCT--GTGCAGAGCAGGGAGAAGCAGATCGGGG a score=82343 s hg17.chr15_random 608610 4080 + 784346 CTGTCCTAGGGTCAGGGGGCAGACAGCCAATAGCACAGGGGCC--GCAGCTCTTCAGGCCACAGCTCCTGGATTCCTTAGACTGGCA-GGGTCAGCCCCAGGCCCTCTCCCTGACCTTGCAATGGGGGATGACAGTGGCTTT---------GCGGGAGGGGAAAAAGCCGCCTTCCCTGAGCACCACCTGGATCCCCACGCAGTGCTGTGCCCTTCATGCCCAGACCTCACTTATGCAAGGATGGGGCTTGGcagcccctttattca---gcacatgaaggccctgagagggaaatggagcccaaggccacacagctggtgaggggagcccaggtgacactccagggccaccccatttcctgccctcAGCACTGCTGAGAGCAGCTGGGGCTGCAGGAAgtgtgtgagtgtgtgtgtgtgtgtgtgtTGGAGGTGGGGGGTTGGGATATCCAGAACCACCTCTAGCTCAGGCCCTTCCACCAG---GACCCAGCTGGCCAGGAAACCCCCCACCACTGGGATTAGCAGGACCCTGGAAGGGAGGCCCTTCCTGTGGTTCCATTGCTCACTCTAGGCAGTCCTCTGGCCAGGGAATGGACAGgctagggctggggaggggacagggactcacccaggcccagttttcacacagcttcagggacatccctggtctcactatgggaagactgagacccagaggggaaagagcttacccaggttcacacagc--aaatcaggggccaagGCCACTCTCTCTACTCACTGGAGGTCAGAAAGCTGCCTGCAGGATG-TTGTGTAGCTGGGACTTCTCTTGACTGACTCCCAGCACAGCCAAGCCTCCAGCATGGGATCCTGTGGCATCAGGAT-----TTTCAGTGGCTCCTGAGCCCAGACTACAGATGGAGCCAGCCGGTGCCGTGGGTGCAATGGTTTGAAGACCCAATTTCCCCATCACCCTTCCCGCCCCACCTCACTTCAGCAGAGAGCTTGGGGTCGGGGGACTCACGGGGAGGCTCGACGGGCTCACAATCCTCGGTGCCACACAGCCGGGAGCTCACAAGGCCAGGCCTCGTGGCCACACTGGTCACTGTCTTCCTCGGGTAGCCCCGTCTGGGTGTTGACACACTTGACCAGTGTGTGACCACTGGATGCCACCACCACAGGGGCCTGAGCACTGGGGGGAGCAGGGGAGGAATGAGTGTCTCCAGGGCCAGCCCTAGCAGTGGGGG----------------CAGGGACACCTCCTCTGGGAAGCCGTCCCTGCGCCCTGTGCCTGACTGGCCTGCCCTTGCTCCCAGCCGCCCTCTCAGTGCCTCCTGGAGGACCTGTTCCCATTCCTAGAGCCCACTTGGTGCTGGAACCCCACTCTCACTTGTGGGATCGGCTGCTGCAGAGGGAAGGGGCATGAGAACCATGGGACAGCCCTTGGGGCGGCAGGGCAGTGAGCCCCTCACACGGGACATGACTGAGAGGCCTGGGCAGGGGCCCCGGGATGGAGCCCTGATGCAGCAGTGAGCAGAGACGTGGGCGAGACACCGCTGTGCCCGAGGGACAGGGCAGAGGACCTGCCGCAGCCCATGGGCAGGAGGGGTGGAGACAATTTCACAGCCGGGG-CCCAGCCC---GCCAGGCTTTGTTGTTAACAGGTGCAGGTCTGAAAGCCCTAAACATgtgctgagtctgtgccagtgtcgtgctgtgcccggccctgtgctttgttgcgttcctccatttaatcctcctgaccctcctctcccaaagc-gtcccaattttacagatgag------aaaactgacccagcaaagcaaagcaacctgcccagagtcactcagcagccagtcggacagactcaaacgctggcccagctgactcccggacccagctcAGGGCCCAAATCTGAGATTTCTGAACCCCTCAGTTCCAAACAGGCCCAGCAG-AAGGTGTCCTGCCC-------------------ATACGAGGCCCCTCTTCTGCCCCCTTCTGCCGC--TGGCCTTTGCTGGGCTCCCTGATCTCCCCAAGCTCATCATTCCTGCCTCAGACTTCACACCTGCTGTCCCCTCGATCCCTGTCCTTGGCATCACTGACTCCTCCCTCGGGTCTCAACCCCA-GACCCCTCCTCGGAAGGCCTTCCCTGACATCACAGCACACATGCCCtttccttgtctgtttctccctgtcaggtgtgagcaccagcatggcagggctttgtccagtgactgctgcatgtgcaggggccacagacagcctggctcacagcacacactccacaGCTCCTTCACCCAA-CCCAGGACTGACCAGGCGCTACCAAGCAC---TTGCTCCCTGCTCCCCCCC----GCAGCCTGGCTCACCTGGCCCCAGGGCCCCACCACCCACTGTGTGCAGGGGTGGGTGTTGCAGGGCCGGGTGGTGTTGGGTCTCAGTGCCTCCTCGCAGAGGTCTGGCTCTGGGCAGGTCACCAGACGCTGCTGCTCACCACCGCCACAGGCCTTGGAGCACTGGGTGGGCAGGGAAGGAGTCAGGGCACAGCCAGGGTCTGAGGGTGTCCCC--TCCCCCCAACTCAACGCCCAGGCCTCACCTCCCTCCAGGAAGACATGTACCAGCTGAGGCAGGGCTGGGCCCCGCAGGGCCAGTGCACAGGCAGCTTGGCAGGTCCAGGCTGACAATGGAAGGGCCACAGTGGCCAGAGGTCCCATGTGTCCACATGCTGCATGTCCCACACTGAGGAACCTCTGCCACAGCTGTGGGAGCACTGGGGACCGAGAGAC--TTGTGTGGACACATCCC---CACGTGCAGGCCCACAGGCGTGACCCCGTGAGGCGTGTGGCAGGA--AAGGCATCAGACCCACGCCCCAGCCGGGGGCAAATCCCTGAAGAGCCCCAGCGAGAGGCCAAGGCTGGCAGGCCCCAGG--CAAAA--GGTGGCATGGCCAGGGGCTGCCATGGGCTGGGACAGACAGAGAAAGGGAGGAACAAGTCCAGATGGGGTCAAAGATACAGAGGAAAGG-----AGACAGGCCAAGCCAGACAAAGATGA--GATGACTCCCAAGAGATTCGGAATCCGGTGCGATCAGGCACATAGACATGCAGCCTGGAGCCCTCCCCTTCCCTGCCGCTCTCGGAACACAGGCCGTGGGGAACCAGGGCTCCACCCCATGCCCTGGGGATGCCTGTCCTGGCTCCATCCTCATGCACCTTACTCCAGTTGCCTGAGTGCCAGGTGGCACAGGGCCACAGGTGGCAGCGGCGGGCAGGCTGGGGCCGGCCAGCGGGGTCGCAGTCCTCATCCCGGCTGGAGCTACAGCACACCGGCCTCCAGAGGGCACCCAGGCCACAGGTGGTGGAGCACTGCGGGGCACAGACCCGTGAAAGCCAGGCAGAGCCCATCCTCGCCAGGCCTCCACAGCCAGGAAACTACccacctaggctagcaagacctcagcaagacaggggccctcttctgggcctcagtttccttatttgcaaaataggctcctccacccacctcccaggaagaccatgagaatgaaaAGTCAAATCCCCCCAGCAACCAGCCGTCCCTGCTCACATGGGACAAAGGGCCTGTGTGCCAGTGTCATTGGTGCAGAGGTTCGGGGGAGGAGACCCTGTGGGCACCCCTGACCAGCTATCCTGACCAGCCTCGTCGCTTCCCAGAGGCACCAGGGAAGGAAGGCTGGGTCCTGGTACCAGCAGCCAAATCGCTGCCTATCCCCGCGCAAAACAAGCCCTGTGGGCCTCAGCCTGCCCCTTCCCACCCCAAAATTAGGAATCTGAACAGAAGCTTGCTTCTCCTGCAGTGACCATCTGGGGACCCAGGGAGGGGGCACTAGCCAGCTTCTTTC-ATGCAGCTCAGACGTCTGC-AGGTCACTGCCAAAGGAGGGTGGAGCCACTGAGGGCAGAGCCAGGTAGCAGTGGGCTGAGTCCAGCCTGGAGGAGCCAGACAGAGCCTCAGGGAAGCTGCTG------CCTGCTGGGCAGGACTGGGCCTGGTGGCCAC--ACAGGGACCCTCCCCACT-GCACAGCTGTCTGAGCCAG----CTCCATCCTGGGGCATGCTGTGCTGCCAGAG---------TGTGCCTGCCC------CTGCCTTCCCTGAGGCCCCC----TGTGCTGCCCAGGAATGG s mm7.chr9 34001526 3448 - 123828236 CTGTCCTGGGGACAGGTG-CATAGAACCAGTAG-GTAAATGCCAAGCA--------------AGCTCTTAGGTTCCCTCAGGTGTCAAGGGGTGGCCTCAGAC--TCCCCATGCCTTTGCAATGGAAGACAGTAATGGCTGCCAAAAATGGGAGGGAGGGGGTAAAGCGGCCTAGCCT---------------TCACGGGCAATACTGAGCCTTTCACCGGTAGACCCCACTAATACAAGAATAAGGATTGACCATCCCTTTATGCATGAGGAAATGACAATCCAGATAGAGAAACAGAGCCCGAGAC---------------AGGTACCCAGGTGTGACTCAAGGGCCACACAGTTTCCTGTGTTCGGCACTGCTGGGGACAGCTGGAGCTTCAGGAAG-----------------------------GAGGTG----------ATTTCCAGAGCTACCTCTGGCTCAGACCTTTCCTCCATAATGGCCCAGCTGGCCAGGAAACACAGCA------GAAGCAACACCACCCTGGGAAAGAG-TCCTTCCTGTGGC-CCACTGCCACCTCTGGACAGTTATCCT-CCTAGGAATAGGCAG------------------------------------------TGCCCACAGCC-CAAGGACATCTCC--CTTCACTGTGGG--GACTAAGACCCCAAGGGAGAAAAGCTTGCC---------ACTGCTGGAGTCAGGAG--------GCTCCTTCCACTTCCCGAGGCTACCAAAGCTGCCTACAGGATGCTTGAATCTTTGGGATTCCCCTTGGCTGAGTCCCAGTTTAG---GACCT------TGGCACCCTGTGGCCTCCCAGTGACGGTGACCATGGGGTTTGAGCC--AACTGTAAACAA---CAGCAGCTGTTCTAGGACCGACGATT------CTCTAGTTCCTAGCCATCCTCCCC---TTATCCCACCATCCCTAAGAGTAAGGAGAC-----ACTCACGTGGGGGTTCAACCAGTTCACAGTCCTCAGTGGCACATGGCCGTGAGCTCTCA-GGCCACGCCTCATGGCTACACAGGTCACTGTCTTCCTCTGCCAAGCCGGTCTGAGTGTTCACACATCTGACCAGAC----GCCGCTGAACACCACCACCGCAGGGGGCTGAGCACTGCATAGGA---GAGAGGAGAGAACGTCTCCAGGACCAGCCATCACAGTCGGGGACTGCCCATCACTGGACAGTACCACCCTCTCCAGGAAGCCATCCCTGA----------------------------------------------------CTAGAG--------------CCTAGTGCTGACCT----------CCCCACTGTCACTGGGGGTATCTGTTCTTGCAATGAG----GGCAAGATACAAGTAAGA--------GGAGATGCGAAACA----------CACACAGGAT-----------GCCTGCACAG----------------------------AGAAGGCAGACCCTGAGATGAGGCACCATGGTACCCATGAGACA---CAGAAGGTGTG--GCTACC-------AGCAGAGAGAGAAAGCGTGTCTCAGGTGTGGTCCCCACCCTGAGTCAGCCT-----GTTCTCAGGT---------------------------TTAATCTCTGCTGGCACAATACAGGCTCTGCCGTTCAGATTTGTC-------------------------CACTCCTCGCTCCATGCTGcccccaatttaaagatgaagggggaaaaaacagcccagcaaggcaaagca-cctgcccagagtcattcagcagccagtgggtca---------------------------------------agcacccaa---tgagcttcttgaaccagtcagcacccagtaggctcagcAGCAAGctgccctgccctgccctgccctgccctgccctgTGGGGcctctctact---cccttctgccagagcggtctttgctccattccctgaacaccccg------tcattcctgcctcaggctcggcacttgctgttctctttatccctcactttagcatcactgacgcct---ttagatgtcaacccaaagtcctctcctcagaggactttccccg----catggc-----cactttTCCTCTATCTGATATTCCCTGGCAA-----AGTACAAG--------GACTTGATCAGGGCACAACTGAATATTTAGTGGCCCCAGA--GACCAGCACACATCACACAC--AACAACTCATCCTTCTAAGCCCAAG---GACCAGGGTCTATCTGCCAAGGGTTGCTGCCAATTCCTCCCCACAAGCAACCCTGCTCACCTGACCCCAGGGCCCTACCACCCACTGTGTGCAGGGGTGGGTGTTGCAGGGCCTGCTGTTGTTGGGTCTCAGCGACTCCTCACAGAGCCCTGGCTCTGGACATGTCACCAGTCGCTGCTGTTCACCACCACCACAAGCCTCGGAACACTGGAAGAACAAAGA-GGCATCAAG-TATAGCCGGGGTCCAAGGGTGTCCTCAGTCCCCACTTCCCCAGGCCCAAACCTCACCTCTCTCCAGGAGGAGGTGTACCAGGGGAGGCAGGGCTGGGTCCCACAGAGCTGACGGTTGGGTGGCTTGGTAGGCCCGGGCTGGCAGTGAAAGGGCCGCAGTGGCCGGAGGTCCCGTGTATCCACACACTGTACATCCCTTGTAGAGGAACCTCCACCACAGTTTCGAGAGCACTGGAGTGCAAAGAATAGTCACATAGAGACATTCTATGCACATGAATGC-----AACATGAT---GTTTATCATACAGCAGGGTTAAACCTTCTGGCCTAGACCAAAG---------AGTCCCAGTAGA-CTTCAACACCAGG-------TGGCAAACCCAGGGGACAAAACAGATGGAATTACTAGGG-------TGAGCTGGTAAGAAGAGTCCAATGGTGGG------------TGGTTCGAA--CACAGAGGAAGTACAGCAACGCAAGCAGGGCCAGGCCATGCTGAATGAAGATCTCCAAGAGGGATGAGAACAGGACCGGATCAGAGTACAGAC-TGTGGCATGATATTC-ACCCTGCCCTGCTGGTCTTCAAATCACAGCCACAGG-ATCCAGGGCTCCC----------------TGCTT---------------------ACCTTACTCCAGTTGCCCGTGCGCCAGGCAGCACAGGGCCTCAGATGACAATGGCGGGCAGGCTGGGGACGGCTAGCGAGGGTGCAGTCCTCGTCATTGCCAGAGCTGCAGCTCACTAGCCTCCAGATGGCGCCCAGGCCACAGGTGGTGGAACACTGTGGACCATAGATAC-TGTAAGCCCAGCAG--CCCACCC---------------------------ACCCACC---------AGCACCTCAA----------ACCCGC----------CAGCATCTTTATCTGCAAGACAGACTCCTCCCCCCACCTCCCGAGAAGACTGTGAAAGAAAAAAGTCAAATGTCACCAGCAGTTAACTATCTCTGCTCCCA--------AGGGCCCGC------------TTGG-----------------------------------CCCACCTACCTACCCTG-CCATCCT-GTGGCTTCTCA------CCAGGGAAGT----CGGGGCCCTAATCCACGCAGT-------------------GAGTGAAATGGG---TAGGAATGTCATCCTGCCTCTCTCCCCAC--------AGACTATGGAC------------CTCTTACAATGACAATTT--------AGAGAAGGAGAACTGGTCATCTCTTTCCCATACAACCCAGACTATTATGAGATCCCTAACAAAAGCGGG----GACTTTGAAGG---------GTGACAATGG-TTGAAAC--ATCTGGAGGAGTCATACTGTGCCTCAGCTATAC--CTGTCCGACCCTCCCAGGCAGCACTGGGTGTGGGAGCCATGGAAAGAGGCCTTCCTTACCCATACAGCTAGCTAAGGTATGATTCCCATTGCTGGGGCATGTAGGCCAGTCTGAGCACTTGATTTGTAGCAGCTTGATTTGCTGCTTTC--TGAAGCCTTCCTTCTGTGTGGCCTAGGAATGG a score=102002 s hg17.chr15_random 612690 2912 + 784346 GCCCCAGGTCCCC-------TCATTCCCCTAATCCTGGGAACC-------CCCGCCCCAAGGAAGGCGAGACAGATGGCGCCTGCGTCCCACTCTGCTCATTTTCAGATGAGGAAATAGTCACCAAGGTCCTGCGCAAAC-TCCCTGCCCACCCAG--CCCACACCACTTGCCTCGCTCCAGTTTCCCACTTGTCAGCCGGCGTTCCTGACAACCAACGGGTCCGTGGGGGGCCCCGCTTCAGCCAGGCTGGGAGGCAGTGGCTGGGTCTCAGGGGCTCTGTGGCTGTTGGCGGGGCTGTCCCAAGCTGGCATGGACAGCAGCCTAGAGCTCAGGGGCACCTCAGGGCTGAGGGACTCAGGCTGACCCTTGGGTCCTGGGTTCAGGGCAGGCTCAGGCGTGTGCCCGAGGCCAGTCAGGGTTGTGGGGAGGAAGGTCCCCCACACTGCCACAGTCTGCAGGTCCCATAAGCCTGGTCCTGGGGTTGGGAAGGAGGGAGTCCCCGGCTGCAGGGGACTGTCCTTGCCCTTCATCTCTGGCAAAGGGGCTATGGGAGGAGGAGGGAGAGAAGCCACCCTAACAGTGGGCCACAGTTCACTATCCACAGGCCCCAGGCCACCCTCCAGAGCTGACTCCCAGGCTACTGTCCCTCCTGTCCACAGCTCCGCCACGTCAGGACTAGGAGAGGAGTGGGTGCTGCTGACCGGGTACAAAGTGGGCAGCGTGGGGCTGGGTCTCGGGGGCAGGTGGGGTGCTCCGCAGCCCTTGGGTCCCTCATCATTTGAAAACCTCGTTGGTCCTGTCCTGCCATGGAGAGGGCAGCTGGCTCTGGCTGTCCTTGCCAACTGGGAAATCATTTTGGCTCTCAGGGGCGGCAGGCGTCTGCAGGCCATCAGTGGAAACCCTGGGCCAGGGCAGGCTGGGGAGCCCAAGATCTGGGGCCCCTATGGGGGTGTCTTCCTCAGGCAGGAAATTGATCAAAGGGTTCCCAGGGGTCTGCTCTGAGGGTGGGGGTGGGGAGCGGCCGGCCTGGCTAGGCCAAGGGCTCGGGGACCAAGGTCCCGTTGCCCCTTCCTCCTTGGCTGCAGGAGGCTCTGTGGCAGGCACAGGGCTACCCGTGGAGGGCGCAGCAGGACGGCTGTGTGGTGGGGGCGTCCGATCCCCTGTCCCCGCCAGGTCTAGATCAGGCTCCTCAGAAGGCCCGTAAGGACAGATCCTCGTGGAAGCTGATGAAATTGTAGTCGTAGTAGAAGTCGTCCACAAACACGGGCCCCGGCAGGTCCAGCTTTGGAGCCTCCTCCTCAATGGCGTTGCCCATGGTGCCTGGCTTGGGTGATGAGGCGGGTGAAGGGCGTGGGGCCAGGTGGCGCGGGATGAAGTCAGCCTCGTTGAAGAGCTCGTGGCTGGAGGAGCCGCTGCCTGAGCCTTCAGGGCCCAGTGTGTCCAGGGGCCACCAACAGGGTGGCAGAGAGCAGGTGACTTCGCTGGCTGGCTGCTGGGCCTCGTCATAGGGGACACCGGTGTCACTGATGCAGAGGACATTTCGGTGCTGAGTCCCTTCCTCATATGTCACTGAGCACTGCAGGGGAAGCCAGGGTGAGGGGCTTAGCCTGGGAGGCAGGCTGCCAGGGGACGCTGGGGCAAGGCTGGGTAACCTGTCCACTGCCTGATGTCAGAGTGGCAGAGACCCCAGCCAGCCCTCTCTGGCCCTTCCCAGCTCAAGGCCATGAC-TGTGGCCAT-GCTTGCCAGGGGCTTCCTGATCCCTGAGGCTTTAGAGTCAGGGGCTGGACCCTGGAATGCCC---AGGTTCCCTCCCAC-------------CCACAAGGTCTCCAGGAAGGCTGTCTGCCTCCCTGTAGCTGAAGACCAAGGGTGGGGCTGGAGGCGGGCACCTTCCCA-TCCCACACTCACCTGAGACCAGTTCCCCACAGCCTACGTGGCCGGACAGGGCACATGGTGGTTGCAAGGGGTTTCAGTAGGGGGCCGGGGAAGGTGTTCACAGGCGGGTGGCTTCAGGGCGCTCTGCTCATCCAGCCCCACGCTGCGGATGCAGAGCACAGCCTGGCAGGAGAGGCCCCCAGGCCCGCAGGAGCTGGAGCACAGCTGCCACTCACCTGCCCACCACCTGCTGAGGGCACACAGGTGTCATCAGTATGGCATCAGACAGGTGGCATTGAC-AGGCTCACCAGCAGGGAGGGCCAGGC----TGGGTTTCCAGGCCCTCGGGGTTTGGGCAGTGCCAGAAGCCAGTGGATGATTCTCCAGAGCTCCAAG-CTCAGGTAAGTGTCCTGCCCTCAAAGTCTGGTGACAAGGCACAGCCCCTCCACTCCTGCCA-----CCTTCCCCTCAGGGAAACTGAGCATGACCTGAGGCCTATTTCCACATCCAGGGACCCAAAGAGGAG-GACCATAGGTGTCCAGGCTGGCCCAGGCTGGGGTGAGAGGTGA---CCGG----GGGTTGGGGCTTCAGCCTTGGGAAGAGAATGAAAGCCCGGCTCCCTCTGCTCCTCCCTGGGGCCTCTGGGGACC-CAGATGTAGGGGCCTGTGGCAGACCCAGGATGCCTGGGGGTGGGGAGT-TGGTAGGGGATGGGGGCGGGCTCACCTGGCAGGGCAGGGCTGCTGGCTGCACTTCCTCTGGCAGTCATCGGGCCGGCCCAGGGGGTCACAGTGCTCCTCGTCCACGGGCCCTGCCTGCCGCTCCGAGCAGTACACACTCTGCCTCTGCACACCTAGGGGCCATGGCG--TTCAGCCTGGGACTGGCACCCAGGTGCCCACCGCCCAAGACCCAAAGACACCCTCTCTGCCAGAACCCTCCCAGAACAGCGCCTTACTGCCCATGTCAGGATGAAGGCAGACCTCCACCGTCGCCTCCTTGCTGTCCTCCTGGTTCTCACCC----ACCCCCTCTCCTATGTAGCTTCCCCTCTGACTGCCCCTGGAGGGGTGGC s mm7.chr9 34005089 2795 - 123828236 GCCTCAGCCCATCATGGCTGTCAGTTGGCTCATCCCAGGAACCGTTACGCCACTCTCCAAGGATGA----ACAG-----GGCTGTGTCTTGCTCTGCTCA------------AAACTGAGTCGCAGGGTCCTGCTCAAACGTTCCCACCATCCCTGGCTCTACACAACTCACCTGGCTCCAGTTTCCTACTTGCCAGCTGGCATTCCTGGCAGGCAGTGGATCTGCGGGGTCACCATCCTCCTCTAGGCTGGGCTGCAAAGGCTGGACCTCGGGGTCCTTGCTACTGTTAGTTTGAGTCTCCCGAGCTGGTGTAGGCAGCAACCCAGGGCTCTGGGTTCCCTCAAGGTTAGGGGTCTGTGGCTGGCCCGATGGTCCCGGGCTC---------------------CTCAGGTCAGTTGGTACTGTCAAAAGCAAGGTCCCAGGCATTGTCAGAGTTTTTAGGTGCTGTGAGCTCAGTTCTGGGCTGGAAAAGGTAGGCGTTCCTGGTTCAAGAGGGCTGTCCCTGCCCCAGATGCCTGGCACAGTGGCCATGGGAAGAAGTGGAGGAGAAGCCACCTCCACAGTGGACGGCAGCTCACCGTGTCCGGGCTTCAGGTCAGCCTCTAGCACAGGGTCCCAGGCCGCATTCCATCCTGTCGACACCTCCACCACATCAGGACTCGGAGAAGCTTGGGTAGGACTGATGGAGGGTGGAGAGGGCTGTGTGGGGATAGGGCTTTGGGGCAGGGCAGGGGATGTATGACCCAAGGGGTTACCATCTGTAGAAAGT----TTGTTCCTATCAGACCATGGAGTGGATGGTGGGCTCTGCTCATCTTCTTTCACTAGCAACTCATCAGGGTTTCCAGGGCCAACAGGTGTCATCATATCATCAACTGAAGCAGGGGGCCAGGGCAAGCTGGGGAATCCAAGTTCAGGGGCCCCCATGGGAGTATCTTCCTCAGTCAAGAAATTGGCCAGGGGGTTGATGGAGGTCTGCTCTAATCCTGG---TGGGGAATAGCTAGCCTCACTGAGTAAGGGGCTAGGAGACCAAGATCCCTGAATGTCTTCTGCCTCAGCTCCAAGAGCCCCTGCAGTAGGTACTGGGGTATCTGAGGGAGATTCAGTGGGTCTGATGTGAGGTGGTGCTGTCCAACCCCCATTATCAACCAGGTCTGGATGGGGTTCTTCAAAGGACCCATA-GGACAGGTCTTCATGGAAGTTAATGAAATTGTAGTCATAATAGAAATCATCCACAAACACGGGCCCTGGCGGATCTAGTT------CCTCCTCATCAATAGCGTTGCTGATGCTGACCGGCTTGGGTGAGGATGCTGGGGAAGGTCGTGGGGCCAGCTGGTTCGGGATGAAGTCAACCTCATTGAAGAGCTCGGGGCTGGAGGAGCCGCTTCCAGAGGCACCTGTGTCCACTATGTACATGGGATACTGGCAGGGTTGCAGAAAACAAAAGGTCTCAGTTATTGGTCGCTCAGCTTCATCACAGGGGACATCAGTGTTGTTGATGCAGAGGACACTTCGTTGCCGAATGCCAGCTCCACATGTCACAGAGCACTGCAAAGGAGGTCA-------CAGCTCAGGCCAAGATG-GGGCTTCT-GGGAAAGCTGGGGCACGGTGGCAGAACGTGCCCGCTG-CTGGTGTCTTAGTGACAGAAGTCTCAGACAGCCCTCTATGGCTATGCTCGCCTCAGGATGATAGCTTACAGTCATAGCATGCCAACGAATCCCTGACCCCCAAGGCTCTGAGAACAGTG--TTGTCCCAGGAATGCCCCCTAGGCTCCCTCCCACTTCGGGTACCAAGCAGTAAGGATTCCAGG------------------------------CAATGGTAGTACCAGAGGCAGGTCCCCTTTCACTTCTACACTTACCTGAGACCAGTTCCCCACACCCCAAGTGGAAGGACAGATTACATGACGGTTGCACGGGGTTTCAGCCAGGGGACGGGGAAGATGTTCGCAGGCAGATAGCTCAAGAGCACGCTGCTCATCCAGCCCCATACTACGTATGCAGAACACAGCCCGGCGAGAGAGGCCTTCGGGCCCGCAGGATCGGGAACATGGCTGCCACTCCCCTGCCCACCACCTGGTAAGCGGTAACAGG----------GTGACATGA-ACACCTATCATGAGCAAGGTTCACGAGCAAAGATGCCCATGCCATACAAGGCTCCAGGCCAATGGGGTGCAGACAA-ACCTGAA--TGGAGGA-GAAACCCCAGCAAGCCAAGTCCCAAGTCAGTGCCCTGCCCCTGAAACCCAGTGGCAGAGC----CCTCTTCACTACCACCAACAACCCTTACCCCCTGGGA-------CCTGGCCAAGG-----------TATCCAGAGATCCAAAGACAAGTTATCAGGGGCATCTAGGCTGGT-----ATGGGGTGCCCAGTGCACTCCAGAAACAAGCTAGGTCCATGGACTTGGGAAAAG-----AAGCC--ACTTTCTCTTCTCCT-----GAGCTACCAGGGTCTGCAGAGGCAGGAG-------------CAGGATGCCTAGGAATTGGAGGTCTGGTTGGGGAC---AGTAAGCTCACCTGGGGGGACAGGGCTCCTCACTGCATTTTCTCTGGCGTTCATCGGGCCGATTTAGAGTGTTACAGTATTCCTCAGCAACAACCCCAGCCTGCCTCTCCATGCAGTATAAGCTCTGCCTCTGCACGCCTGGAAGCCACGGGGAATTCAGCCTGGGCCCGGCACCAGAATGCCC----CAAGAGACATACACACAACCTCTCTG-CAGAGACCTCACAAAACAGGGTTCCACTGCCTCTGTCAGGGTGAAGGCAGGCCTCCA---TAGCCTCCT--CTGTCCTCCCAGCCTTCCCTCCGTGACACCCTATACTGTA-GGTGGCCCACCTTGCTGCTTCT-TAGTGGTGGC a score=7590 s hg17.chr15_random 616032 138 + 784346 GATTGGCTTGGGTGATGAGGCGGGTGAAGGGCATGGGGCCAGGTGGCGCAGGATGAAGTCAGCCTCACTGAAGAGCTCATGGCTAGAGGAGCCGCTGCCTGAGCCTTCAGGGCCCAGTGTGTCCAGGGACCACTGACA s mm7.chr9 34006353 138 - 123828236 GACCGGCTTGGGTGAGGATGCTGGGGAAGGTCGTGGGGCCAGCTGGTTCGGGATGAAGTCAACCTCATTGAAGAGCTCGGGGCTGGAGGAGCCGCTTCCAGAGGCACCTGTGTCCACTATGTACATGGGATACTGGCA a score=121950 s hg17.chr15_random 618302 5368 + 784346 TCTCACCTCTGCCACAGGTGACTGTACACTTGGTCCAGGGCCCACAGTGCCAGGAGAACTCGGGCGGCAGGACCTCGCCATGGCCACCTGCCTCCCTGTGAATGGTGTACTCGTAGTGCACCCCAGGGTTGCTCTCCTGGAACAGCAGCTGGG-TGGGCAGGCGGGGGCCCGTGAGCACGAGGTGTCTTCTCCATCCACCCAG-------TCTTAAAGGAGCTGACCCCAGCCACCTCTGTGAACTGCAGCTACACAGTTGGGCCATCTTAAAGATGGGGAAACCGAGGT--------AGAGGCCTCAGCAGGAGGGTCTGGCTCAGAGCCAGGCTCTGTGACTAACCCAGGGCTCACTCCTCCAGGACGAGACCTACCATGGGAGGTGCTGGGCCTGGGGACTCCGCCTCTGCTCCCCACGCCTGGGCCTCGGGAGGCAGGCACCTGGATCCAGACAGGCTCCTTGGTGGGACCCGGGGACGTGAGGTTCTCCCAGTTGCCCCTGCGTGCGTATGTGACGGTGGTCCCTGCCACCTGGTAGTCCCCGTTCTACTGGATGGTCCAGCCACCATTGAGGAAGTACTTCTCCGGGTCCTCGCTCTGCAGTGCCAGGAAGTTGGCAGCCTCAGCCACCTCCTGGATGCGGACCTCACGTGTGCTGGCTGGGATCAGCCCCACGTCCACATACCCTGTCAGGCAAG--------GGTTGTGCCTGGGGTGAGAAGCTTGCTTATCC--CCACCTGCTCCCCTCACATCTCTCCCCACTTGCCTCCGCCTGCTGATGCCAAAGATTT--CGCCATTAGCTTTAAAGTCTGAGCTCCCC--------AAATTGC-----TCGGATCTGTCATGGGTCACCAAAACCTTGCGGAGGTGCCACAAATCCTGACCCCGTGGC-CATGCCCCGTCACTCCTCTCTTGGGGACC-------TAAACTGGTC-TCATCA-TAAGGCTGGATCCATCCCCTACTCTAAGGGCCGGCTGGCATTCTCTTTCTAAAAAAAACCAAAGTGCCCAGGCCTTTCTCC----TGGGACACC------CTCCTCATCC-CCACGCAGCCTGCTTTTATTCATTCACTTCCATCAcacccatcacgtgccgggcactactctcagcacttcacatgtgtaagctcatgggtaacggccctatagcatggtactattgttaaccccattttacagatgagcaaagtgaggcagacagggagagtaacg----tgcatgagcgtcctgctgcaatataagcagcctccagggccagtgctttatccaccacactgcactgcatctctgGGATGAAATCTAAGCTTCTCAGCCTGGCACTCAAGGCCCCATAGCTGGCCCTGCCTTCccttcttgcctccagggctctggcgcaagctctttcctccatttggaatg---cccattccatctcttctgagttttatgattcagctcaacttccgcctcctgcaggaaaccttccctgacttc-----------------cccaggccaggaccttcttcctcagtgctcccacagccctctgggcctccc--tccactgcactgatcacaccagaaggttctgtcccccttcaggactgagcgcttcacCTGCATGTCCTCATCACCTAG--------CACACAGTCAGTACTTCAGCAACATGTGCAAAACAGACC-AGAGGTGAGGGCATGGAGCTGGGGGTCTCAGAAGATTCAGGAGGAGACTACCATTCTTTGAAAGGCCCAGGGGCCACACACAAGTCGGGGTGGCCCTGCCTGGGGTCTCTGGGACAGGAAGACTCCCCATGGGGACAGGTCTCTGCGTGTGGGCCAGGGGTCCCCTGACTCCTGCAAGAATCC--ACCCCAGCAAGCC------CTCCCTGCTTAGCCATCTCTAGGCTGGGTGGGGGCCACGAGGCCAAGGACAGGGGCCCGGGGGAGATGGGGAAGGGGCCACCAGGTGAAGAGCACAC-CCCTCCCCACAGTGGTCCCACCCCATACCCAGGCCCTCGGCCTCCTCGAAGGTCCCACTCACGGTGTGGCAGGTGGAGCCGTTGCCGTGGCACACGCCACAGCGGTCCTCCATAGTGCCAGAGTCAATCTCAAAGTCACAGCCCCACGTTCTGCAACACACGAGGAGGGGAGGCCCCTGGTGCTGGCGGCCAGCCCTCTGTGGCCCCAGCCCCgggggccagccagggtcaggagaagaaagctgggagtgggggtcgggaggcctctctctggccctgccccaccccagctgtgcctc----tgacccaggtgaacttctctacctccctgagcctcagtttcctcagatgtga------gacagggagacccacccctcccttaaaggcatgtcatgagcatcacaagagacaagagaagggaagagttctgca---aagcctgCGGGCAGGCAGGGGATCTGACACGCCACGGGCTCCTGAGCAGCGCGTGCAGGGAATTTCAACGTCAAAGGCACTGGGGGTTGGCACCTCCCTCCTGGTCCTCCTCGGAGCCCAGGCCTTGATACCCCAGTGGTTTAGAGGGCAAGAAGCAAGGACAAGTAGGTGGCTGGAGACATGGGTAAAGAGGAGAGGCCATCGTTGTTATTAAAAATAAGAATATAAATTGTTACCAAACACTGAGGCCTACTCTTCAGGGCTCAGAGCCCTTCATGTCACCTGTGCCACCTCATTTAACCCCTCTATCAGGGAGCAAACCACTGCCTGGGGTCAGCCAGCCAGCAAGAGGTCAAGCCACTGCCTGGGGTCAGCCAGCCAGCAAGAGGTCAAGCCACTGCCTGGGCTCCGATTTCCTGGCTGGGGCGGTGCTGGTGCAGGCATCCAAGGAGACGCAGTGG------GGCGAGGCC-------------------TGACTGG----------------GGGGGGTCCCCAGTGCCAGGAGGCGTGG----TAGGGGCTTTGCCTTAGAGGTCATAGAGGATAGGGGCTGGGAAGCCCAATGGTAGAGCATGGGGAGGGTGGCCCGAGGAGGACCAGGAGAGAACCTGGGGCCCGCCAGTGGGGCTGGGGGCAGGCAGTGCTGGGAGAGCCTCTTCCTAACCAGGCACACCTTACAGATGCCATTGATGCAGAGGTCCCGGCTGGCTCGGACCTGGTAGCAGGGGGTGCCATCAACCACGGCGTCCCGCAGCTTCTTGGCAAAGTACTCATTCGCGGGCCGGCAGTGCAGCTCACAGGGGTTCACTGGGGGCCCAAGTAGAAGAGTCAT-CAGCAACAGCTGGAGCGGG-AGTATGGAGGCCACCAGGAAGACCCCTCCGTGACACACATCCATGGCAGGCTGGAGGCTCCCAAGCAGCACAAACATGCTGGAGGCTCCGGCTGGGCTGGTAGCTATCTGCAAGGCTGCAGACTGGGGAGCTAGGGGCGAGCAGCAGCCCCAG--GGGACAGTGGGAGTGGCCCAGGCTTGGGGTGGAGACTGGGTCTCCTGCTTGCATCACAGGGTAACCTTGGACCCACACCCCGCTCGCCGCCCTCTGAGTCTCAATGTTTCCATGGGAGGCAGCACTCACCGTCATTGACCATGGGCACCCATGTGTGCAGCTGGCCCTCGTAGAGCATAGCGTCAAAGTGGCTGCACTGGACGTGGCGGAAGGAGGGGCGGCCAGCGGGGCAGGCCTGCAGGTTGCAGAGGCGGAAGCGCTTCCGCTTACCCACACAGTATCTGCCTTTGTATCTGGGCCTGTGGGGAGAACCGGGGTGGACCCCAGTGAGGGCCCAGTGAGTGCTACTGCATGGCCACAGCCCAGAGCAAGCAGCTTC-----CTCCTGCACCCACACCCCAAGATCCCTGC----TGCCCAGCTTTGT--GCACGCTGCTTCCCTCCCTTGGGTTGCCCACCCTGTGGCCCAGACACACCCTCCCTGTCTGTAGGGACCTGTGGGGAGGTGGCAGCAGgaag--cctgagctctgcccccaacctgctgtgtgatcgtggacaagtcttcggccaccctctgggcctcagtttcctcatgtataaagtggggttggggctgcccctgcagagggctgttgagaagctgggacaagctgcaggcatgACTGGCACTGGCTGGAGGGACTAATCCGAGTCTCCAGCCCATGACACCAGCATCCTAACGAGCCCTTGAGTCCTCAGCCTTCCTCCTGGTGGCAGTACCCCCAGCCTGGGTCTAAAGGAAGCGCCCAGGGCCCCAGCCAGCTGAAAGGTATGATGGAGCACAGCTCCTGAAATCCTCCACATTTAGGCCAGGGTCGCTGGCCTCCACTCAGCTCAGACCTGGAGGCCAGGAGGCAGGGA-------GGGGCACAGGCCA--GTCTTGGGTAAGCGCAGGGCCCTGGGTGGGGCCGACTGTGAACCCCATGCCTGCCCCGGGTGGCCTCCTGAAGTGAAGA--TCAGCCGGGTAGTGCC---TCGGTCTACAGTACCACTGGCCTCTGCTTCTCACCAGATCTTCACACCCCCTGCGcccccccatttagatggggaaacagagatccagagaggtgaagtcactc--acctcaggccacCCCTTCAGTGCTGTCCCATCCTCCCAGCTGCTCCATCTCATCTCAGGCCCTTGTTGTGTCTCTGAGGCCACCAAGCCCCTCCTGCtgagtgcccactacagatgagctgcagggctgaggggctggcctgcataaactgcatttgcccctgactacaactttactggatgggcactgctattatacaggtg-gggaaacggaggcccagagaaggggtgaag-----------------------aggggattcgaaccctgagccatctaaggtccagggcccatgctcttccccactgccctctcctgcctccttccagccagcagctg-ctttgccatgtggcctctgatgagtctctccagtctctgggcctcagtgtccccctttctgcaaaggggTCAGCAGTGGGGACCCTGTCAGCCCTCAGAACACTCCTTGAAAGTGACTCAAGGTGGCCTGGACACTCAGACTGACCATTATGAGGACACTTCTAAGAGCCAGGGGCTGGCACAGAGCCAAGCTCCTGCAATCGGCTGACTGC-CTGGGTCCCTCTGTCCCATTGCCCAGGGCACCCTGGGCCCCACACTCACATAGGCTGCATGCACTGCTGCTTGGCTCTCTGTATGCCCACGCCACAGCTCCGTGAGCAGATGGACCAGGCGCTCCAGCCAGACCAGCCACCATCCATGGCCTCGGGCTGGAAGCCCACAGGTATGCACTCCCCATTGAGACACCACTACCGAGACAGACGGAGGTAGAGCCACCCCACCCCCAAGCCTATCAGTCATCCTCACCCTAGTAAGAACAAGGTGTGTGAGAATGCTGCAAAAGGCACAGAGGGGAAGGATGGAAGGTGAGAGAGGCCCCCTCGCAATCATCACAATCATCTGTGACCCAGGCCACATGGAGGCGCTGAG------CAGGGAGTAAAACAGCCCACGTGCTGACTCAGCT s mm7.chr9 34008003 4784 - 123828236 TCTCACCTGTGCCACAAGTGACCGTGCACTTGCTCCAGGGCCCATAATGCCAGGAGAACTCAGGTGGTCGGACTTGATCATGGCTG------TCCCTCTGGATGGTATACTGGTAGTGTACCCCAGGGTTCTTCTCCTGGAACAGCAGCTGGGACAGGCAAATGGGGGCCAGTGAGCACAAGGGCTCTTCTCTATCTGCTCAGAACCTGCCCCTA---GGGTCATCTCCAGCCATCTCTGTGAACTA-AGCTGTACTGGAGACCTACTCTAGAGAGGAGAAAACTGAGACCGAGACTCAGAGACCCCAGCAGCTGAGCATAGCTCAGAATCAGATCCTACAG--AGCCCTAAGGTTTCCCCCTTGATAT----CCTACCTTGGG---------------GACCACCCCATTTATTCCTCCCATCCTGGCCCCTAGAGGCAGGCACCTGGATCCAGACAGGCTCACTGGTGGGGCCTGGGGATGTGAGATTCTCCCAGTTGCCCTTCCGTGCATAGGTGAAGGTAGTGCCTGCCACTCGGTAGTCTCCATTCCACTGGATGGTCCAGCCTCCATTGAGGAAGTACTTATCTGGGTCCTCACTCCGCAGGGCCAGGAAGTTGGCAGCCTCAGCCACCTCCTCAATAAGAATCTCTCTGGCTCCGGCTGGGATCAGCCCTATATCCACATACCCTGT-GGGCAGGATGGTACAGTTTGGTCCCCGGGT-----------TTAATCAGTCAGTTGCCCCC----CACCTTCCTGCACTTGCTTCTG-CTGCTGAAGCCAACGACTCCACACCATCAGTTCATTATTCTGAGTCCCCTCCCCCAAAAAAATATAGGTATTGTATCCACTCTGGGTCACCAAGGCTTCAGAAAGGGCCCACAGATCCTTCCCCTATGGCTCATAGCCCACCATCACTGTCTGGGAAACTAGGAAAATGAACTGATCATTATCAGTTGAGCCTGATCCATCATC----------------------TCTCCTGTCCTGGAAAGCCA-----CTGGGGCCTTTCCTTGCAATGGGTCGCCTGAATTCTCTTTTTCCATTAAGCAACC--CTGTTCTTGGGT---------------------GTGCCCAGCactactc------catgacat------------------------------aagacactgttgttagacccactttacagatgaggaaa-tgaagcactgaggtaggttaGTTGTTCCGCATAGGGCTCCTGTGGGGATACAAGT---------------------------------------CAGCCCTAGGAAGAAATGCAAACTGTGGAGCCCAGCAGT-ATAGCCTCACAG-----CCTACCTGCCTTACATGGGC---AGGCTGTACCACAAG--CTTGCCTCTAGCTGGGATTCTCCTCACCCAATCTCTGGAGTCATTCATCATTAGGCTCATTCTCCACGTCCTATGAGAAGCcttccctgatttccctgacttccctgacttcccAGGTCA-GACCTTCTAGCTTGGTGTTTCCTTCTCTCCCTGAAATACACAGCCTACTGCCTTTGTCACAGT-GAAGATTCTGTCACCTG-------TAAGCTCTTCACCTAGGTGTCCC-----CCCAGAGTTAAATCACACAGTTGGCACTTAAGCAATATGTGTGACTCAGACCTCAAGGCTGGGACATGGTACT----------AAAACTTCAGAAGTCAACAGCC---CTCAGAAAGGACTACCCACCACTCACA----------------------GTCACT-----CAGAAGAACCCCTAAGAGAACAGGTCTC-ACTTGTGA--CAAGGATTTACTGACTGCTGTGAGGATTAGGACCCTGGTCAAACAAGGAGTGCTCTGAT--GCTATGTCTAGTCTAGACGAGGACCCGAGGACC----ACAGGGGC------------------AAGCAACAGGATTACAAGCATACATTCACAGCCCAGCAGCCCCA-ACCATACCCTGGCCTTCAGTCTCCTTGAAGGTCCTGCTCACAGTCTGGCAAGTAGAGCCATCCCCCCGGCACACGCCACAGCGGTCCTCCTCAGCACCAGAGTCAATCACAAAGTCGCAG-CCCACGTTCTGTAATA------GAGAGGAGGCCCTTTGTGCTGGCTGCCAACCCCCTGAG----------TATGTGCCAG---ggctcaggagagagaccatagga--ggaggtcaaaagcctttgcttgggtccagtcccatcacagtcatcctgcctgatgac-----taagctctttttc--ccctgatcctcagtttctctagatgagaaggggggagggggacatcatttcATGCCTTAAGAG--TGTTAAGAACATCCCAGGAGACAGGAGGCAGGACGTGCCTCTCACATAAGACTACAGATAAACGTGGACTCTGGCACACCGTGGAATTTT------TCTATAAATAGGA-TTCACTATCAAAGACACT--GGGTTAGCCCCTCTTTCTTCAGCCTCCTTTAAACCCAAGCTTTAAAA-----------------GCAAGAAGCAAGGTAAGGAAGGTGGCCGGGGCCCTGGGCATGGAAGAGCAGGAAGC------ACTAGAAATCGGAA---GAACTATTACGAAGCACAGTG--CTA-TCTGCA-GGCTCGGAGCCCAGCATACCACCAGGACCA-GTCTGCCAACCCCTT-----------------------------------CCAGTGAGAGAGGAGGCAGTTGCCTG----CATCCA-----------------------CCTAGGC-----TTTCATGGCTGGAGCTTTATAGGT--AGGCATGCTGGGATAAGCAGTAGGAAACTGGTGGAGACAAAGTGGGTAAGGTGATAGTGACTGACAAGTTGGTGCTAACTGTGGGCTCTCCATTGCCAGAGACAGCAGGGCACAGAGGCTGTGTCTTAAAAGTCAGACAG--CAGGGGCTCAGATGC----------AGCCTGGAGAAAG----CCAGGAAGCCCTGGCAGTGGGCCCAGGGCCTGCCA----------------GCAGGACTAGGCGAACCTCCTCCTCTCCC-ACATACCTTACAGATGCCGTTGAGGCAGATGTCACGGCTGATGCGGCTTTGGTAGCAAGGGGTGCCATCCACCACAGCATCCCTCAGCTTCTCTGTATTGGAGGAGTTGGAAGGCCGGCAGTGCAGCTCACAGGGGTTGTCTGATGGGGCAAGGGGAGGACTCATGGAGCGACACCAAGAGCAGGCATTACAGAGGCCACCAGGAAGACCCCTGCGT------CCTCCATGACA--------------------CACA--------------------------------------------CGCAGACTGAGGAGCTAGAGATGAGCAGCTCTCCCAGCAGGGACA----------CCAAGGCCTGA----------GGGTCCTATG------TCA---------CTGCGGTCCATACATC-CTCA----CCTCTGGGCCTCAACATCCGTGTGGGTAGCATAACTCACCGTCATTGGGCACAGGCACCCATTTATGGAGCTTGCCCTTGTACAGCATGCCATCAAACTGGCTACACTGGGTGTGACGGAAAGAGGGACGGTCCGGCGGGCAGGCTGGCAGGTTGCAGAGCTGGGACCGCTTCCTCTCCCCCACACAGTACTTGCCTCTGTTCTTAGGCCTGTAAGGAAAGCCATG--------------GGGCTATGAGTATGCTATTAGCT--------CCCATGCCAATCAACATCTACATCTTCTGCACCCA------GAGTCCCCTGCCCCGCCCCCACCCTCCCCATCATGCTGCTTTGCCCTTGGGGGCTG-------------CCATATACACCCTCCCTGTCTCCAAGGATCTAAAGACgagtggcagcaagaagaccctcaggctcagcccagagctgctgtgtgaccatgagcaaatgcactgccatgttccggacctcagtctccttctctctaaaatggagttggaa-tgcctcta-agagggctactaagaggCTAGAACATGTAGTGGGC----------------TGATGGGCTAG---------------------------------------CCTTGGGTTGTTAGAGTTGTTCCTGGGTGCAGCATACCTGGGCCAGGTC-AAAGGAAGCCTCCA-GGCCCCAG--------AAACTACCTTG--GCTTGGCATCTAACCTGTACCCCATCCAAGCCAA----GCCAGCCCCACATTGGCTGAG----------CTGGAGGCAGGGACATGCTGGGGATAGGGACCATGGGCCTGGTGAAGTACCATCCCTCAGATGGAACTGGCTGTGAATTCCA--CCT--CCCTGGCAGCC-----AAGCAAAGAAGTTTGCCCAGTGGGGCCAAGCCAGTCTGC-----------CCCTTG--TTTCATTAAGTCT-------CCTAAAGCCCCC---TTTAGATGAGAAGGC--------------------TCACCCGAAGCTACAGCCACCCCACCAGTACTGCCCCATTCTCTCAGCTG---CAGCCAATCTCAGATAC------AATCTCAG--------------CTTGTGCTGGGCGTTTCCCGCAGCACAA--GGAAGGTTCCGTGCCTTCCCCATATTACCTGACTTTACCC--AATGACAACTTGACTAGGAAGGCTCTGCTAGTACCTATTAGCACCAAACTGAGGCCCAGAGGAGCCATGGAGAAGGAAGGCACTTGTGTGGGGACAGAGGACCTAGACCCTAAGCCTCCCTGGTTCTAAG---------------CATTCACCTTTGCATCCTCCTCCCTG-CAGCCACTGCCTTTGCAGCAAGGTCTCTG-TGCATCTCCCCCGGCTCTTGGA--GAGCACTCCCCTCTTGGCTATCGTGTCAGCTCTGAGCAAC------GCTTCCAGAACACTCCCTGGGAGTGGCCCGTGGTGGCTTAGACACTGGACTTGACCATTCCAAGGACACTTCTGAGAGATGGAGGCTGAAACAGAGGCAGTCT-CTGCTCTCAGCTGGCTCCATTCGGATCCTCTCTCCCAG------------CCTGGGCCCCACACTCACACAGGCTGCGTGCACTGTCGTTCAGAACTCCGTACACCCACGCCACAGCTCCTCGAGCAGTCAGACCAGGCACTCCAACCGGACCAGCCACCGTCCACCGCCTCGGGCTGGAAGCCCTCAGGGACGCACTCTCCTTTGAGACACCACTACTGAGACATATGGGGGGCAGAC-------CCCCGACACCTGTCAATCATCCTCACCCCATTGAGATCAAAGTAGGTAAGACAGTGTCAAAAGACA-----GAGGAGGATGGAAGGTGTAAGAG----------AGACTTTATGGTCACCCACAACACAGACGCCATGGTGAAGCTGGGTGACCATAAAGAATAAAATAAAACCCATGTTGACTGGGCC a score=37235 s hg17.chr15_random 623785 2023 + 784346 GGCCCGGTCACAGCAGGAGGTCTGGCCTCTCA---CACATCCACTGCCGGGACTG-GGAACATCGCCTACCTTATTCTCCCCACACCGGATGCCGTCCACGGCTGCATCCAGCTTGGAGTGACAGGTGGTCCCCACAGAGCACCAGAGTGTGTGGCAGACATTCTGCGAGGAGGAGGGCATGGGCCATAGCCTC--ACCTCCTCCCCAGTGCCGCCACCCACCCTGCCCCCCTCCCTGTCCCCAAGGGT-CCCTGGGCACCCCTCCACATGGCAGGGGCCCACAGACCCCCAGAGGTCCCTTCTTGTGTGT--------------CTGCTCCCACCTTCCTCCCCAGACCACGTGGTGGTGTGGGGCGCCC----GGGGCTGCAC---------------TGCTCAGAGTGGTCCTCAGCTGTCCACACCTCTCCCGGCCC--AGCGCCTCCTCTGGAAACACTCCTGTTAGAAGATCACTTCAGGCGATCTTCGCCAGGATAAATAGACCCTC-----CCCACAGGGG-------TTCCTTTTCCCTCTTATGAGCCagctccagagaggcgaagggacttgcccgaggggtcacagtcggtccatggttgacccagaattcagagctgggtctgtggccgcccatc-cctggcctctcccacaggccactTGACGTCTCACAGTGTCACTCAGGGGCGTAG---CCCAGCCCAGGCGAGGTTGCTCCCAAGCTGGCATCCACAGGCTGGTGAAAGCTGTCCCCTAAGCCCTCCTGTCGGGTCCCCACACCCCCACACCCACACCGGCCCCACTCACATCCATGTCCTCGCAGAAGGCAGAGTAGGCCCCATACTGGAGGTGGCACTGGTGGCTCACATCATAGAGGACCCCAGGCAGCACTGATGGGAAGTCAATGATGTCCTTGGCAGGCGGGTCATCCAGGCACAGGCTCCACCCATGGCTAGAGATGGGACGGGAGGATGG-----------------AGGG---GGGCGCAGCCTGTGAGACCCATCGGAGAAGCCTCGGTGGGACCAGGAGAGGAGGAGAGGTGGGAGGGGGCACAGAGCCCTACAACTGTAGGAAACTCCAGCCTCCCCGCTCGGCTCAGCCGATCCTCCACCTGCAGCCAGTAGCACAGGCCCTCCCAGCCAATCTCATCTCACCTCCTGGGCACTCCAGCTGGCTAAACA--ACCCCAACCCCAATCCCAGGCCTCTGCACACGCTGC------------CAGGGCCCTTCCCTCAGAAGGCCTCCTGGACCGCCAAACCCTCATGTGGCCCTGCTCTCCGACCCTGCAGCCTCCGTGTCTGAGCCCAGACCCTGGAGCCAGGCCCGACAAGGATCCGGAGAATATCACATCACAGTTGACACAACAGAGCCTCCGACGGCCCCACCCAGGCAGAGACCTCGGGTCATCTGTGGAAGGGCAAGGTCTGGAAAGCAGCCCCTCCCCTGGGAGAGAGCCTAGGGCATCCGTGCCTGTCCCCTGTTTCCCCCACTCCCCAACAGGGCTGGCCTCCAGCCTCTGTCATACCCTATCTACTCCTGCCTTCCTCCAGCTGGCATTCCCTGGCAGCGGTGGCGGGGAAACTGGCAGACACGAGCAGGTGCCATCTGTGTCCACCACACGCTCCTGCTGCTGCGGTGTGGCGAAGACAAGGCTGCCCAGACCACCACGAGGCAGCGAGCGTGGAGTC--CGGGGC-CCTGGGGAGGGCGGCCCAGGCCCAGCTGGCACCTGCTTCTGCCCCTGCCTCACTCTGTACAGCCCTCAGGCATGCTACTGCTTCTGGGACCAGTGACCAGCCTGCTGTACCTGCTGGACCTTAGGCGGCCACTACAACGGCTTAGCAGCAGGAGTGCCCTGGCATGCTGACCAGCCCACCCACAGCTCATTGCT--GTCCT---------GGAGGAAGGTTTGGGGCCCTCTGCGGGGCAGCAGTGGCTGGGGAGAATTGAGCCATGCAGACATGCGGGGCTGGGGATGACCCAGGCAGCCACGACTTGGGCAGAAGCATGGAAGGAGGCAGGACCCATGGGACCTGGGG--------------CCTCTAGCCAGGCAGGGGAGATGGGGAGGCAAAATCCCTCC s mm7.chr9 34012890 1791 - 123828236 GGCACGGGCA---GAGGAAAGACAGCCTCCCAGACCCCATACTCCGACAGGCTTGAGGTTTCCCACGCACCTTATTCTTCCCACAGCTCGTGCCATCCACAGCCGCATCCAGCTTGGAGTGACAGGTGGTCCCCACAGAGCACCATAGTGTGTGGCAGACATCCTGCAAAGA----GGCACATACATTACCCTCAGACACGTTCCCCAGGGACAGCACCCGCTCTG--TCCCTACGGTCCCCCAAGAACACCCCGGACACATTTCCACAGGG---------ACAG------------CCCATCCTGTGAGTGTGCAAACTCGAGACTCCTTTGGCCCCTCTCCCTCAGTCACATGATATCATGGGGCCTTTGAAAGGGGCTGCCCTCCAGGCTGGGTTGGTGCAGACAGCTGTCTCCAGCTGGC--CACCTCTTCCAGCCCCAGGCTATACCTCCTGAAACATTCAAGATAGAAGGTCAGGTCA---TATTTTTACAAGAAC-------CTCTCTGGGACCCTGAAGGGCTGATTTTTTTTTTCCCTTCTTCTATGCCaagtccagaga-gctgagggacttgt--------tcaaagtcacctaagggttgacatagaatccagacctgagcctgtgcccatccaaagccAGGCCTCGGCCACAAGTCACATTAGGTATTACCATGCCCCTTGAAGGCACCACCCCCCAAGCCAGGCAGAGTTTCTCTGAGCCTGGCATTGTCAGATTGGTGAGGGCCACCCGCCTATGCCTCTCAT----------------------------GCCCTCACTCACATCCATGTCCTCACAGTAGGCAGAGTGAGACCCATACTGAAGGCGGCACTGGTGGTTCACATCATACAGGACACCGGGCAACACCGAGGGGAGTGCAATGACATCCTTGGATGGACGGTCATCTAAGCACAGGCCCCACCCACGGCTGGAAAAAAAAAAGGAAGAGAGAATAACTTGAGGTCCCTAGGGCACGAGTGCAGCC--TGAGACCCATGGGAGAAGCCTGGGT--------------AGAAGAGCTAGGAAGGACTTGTGAACCTGGTG-----AGAAAATGACAGTCTTCCACCTAG--CCAGCAGGTCATGTGACCCCAGCCTTCCAAGGTGGCCCTGAAGACCTCTCTCATCTGGCC-----AGATCTCCAGCCAGCTGACAAATACCCCACCCCCACAGGCAGGCCTTGGCACGTGCCCCACCACAGAGACTCTGGCACCTATCTTCCAAAGG---CCTGGTCCACCCAATCCTCAAGTGGTTATGCTCTTAGCTCCTGCAGCTCCT--------GCTGGGACCCTTGGGCCAGGC----------TCTGGAAACTGTCACACCTCAGCTGCCACAACA-------------------------AGAGACC--------TCTGAGGAAAAGCTACCC-----AGCCACCTCATATCCT------GACCCGAGGG-------ACCAGCCCTCTGCTT--CTTACTGCCCA----------------------------------TTTCTTCTGCCTTCCCCTAGTCAGCATTCCAGGACA---GTGACAAGAGAATGGGCCAGCATGAGCAGGGCCAGCCCATGACCATCACACACTCCTTCCGATGTAGTG-----------------------CCGCCAGCAGGCAAGGAGCAAGGGGGCAACAGGGCTCTTGGGAATGGCCTCCCAAGTCCCACC--CAACCATCTCTGCCCT-------------------------------------------GACAGTGA------GGTTGT-----CTGGA----------------------------AACGGGAGAGTAGGAGCATGCTG-CCAGCCT-CCTGGGGCTCGTTTTTTGGTCCTTCTGGAATGGGAGGAGGGTCCAGGGCC-------------CAGAGCCTAAAGAGAATTGAGCCACAGAAACAGGC--ACCTAGG--TCAACCAGGCAGAAAGGACTTGGTTGGAAGCA---GTGGAGCTAAGATCTGTGGGACACAGTGAGAGATAAGGACAACCCCAAGCCA-----GGGAGACTTGGGGACAAGATTCATCC a score=9139 s hg17.chr15_random 627075 247 + 784346 CTTGGGAGTCAGAAACTCAAGGTGGCCGTCAGCCAGCCCTTCCTTCCTCTGGCAGGCTGACTGCCAGGTTCTCTGCACTGCCG---ACACACCCGGATCCCCCAAACCATCAGCCCTTCCCCTCCACGCCCCTCCTTAAGCTAACTATAGCAGGGCTGGGCAGTCCCACAAGAGGTCAAAGCAGACAGTAGGTGACTCCAGTCAGAAGCTTCACTCTCACCTCAAGACTGCAAAGAGCTGCCCACCACTG s mm7.chr9 34015105 233 - 123828236 CTTGGGA-----AAAGTCAGAGGGGGCG-------GCCGTTCCTTCCTCTGGCTGGCTCACTGCCAGGCTCCTCCCACAGCCGGACACACGCCAAGGTCCCCACACCCATCAGCT-GTCCCTTCAGGACTCTTCCTTGTGCTAATTATGGCAGGGCTGAGCCACCCCACATAGGGTCGGAATAGACGAGTGGTGACTC----GAGAAGCCTTACTGTCACCTGGATATAGCAAAGAGCTGTCTATGCCTG a score=16593 s hg17.chr15_random 627611 952 + 784346 GGCCAGT--CTAGGTTCTTAACCACCAAACAAAACTCTTC----TCTGCTTCCAATC-CCACCCCCCACCCCAGTAATCCCTCTTCCACTGGAGGCCAGTATCCTTGCTCTTACATCCCTAATGGACCTGGTCACATCCCTGCTTAAGCCCCACAGT---GAGTGgacttctagaaaaacatggcacattgagcagacagatttatcgctgcttccttccaagactccactataatgacagtagaggaaataaacaaggcataaatccat------------------aaggggtgatgatgagtaatgaaggatgtcaacaagattctggaagctgggaagcagatggccaggcagtagctgacttgctagagtgatgaaagctgagagtcagattcctgcaggggggaaccacccagaagcagaagcccgaaaaggctcaggaactgagtttgcagggactcctcagggccttagtgccaggagggctgaagacagtagggctgaaagtctgtaagaaccgatcagaccctagatcccctccccaaccctgagtagccaagtgacggccacctgccatccagcagagggccagggatcacttcctggagagggtgaaccaggaggctctggcccaggaacggtggacacacatgaaggcccaaggcagaaggacctacagagaaaaggggac-aagcaaaagtctacacattgaagggtaagaaacacgccaagcccctttcccacttggatgctggaatgctgcagc--------cagacat-acactctcccaggaaaagtcgagaggattcctctcaggaaa--ctgaatcactcagaaaaatgacctcagatagtgacattagaggat----------------------ctccccaaaatagccccatctgaaccagtccttcagcagtgacttggaaaagtcctgcccaagtccacaaactgcccaattag----tgtctct-gcatctccttgctatatatgaaatacag s mm7.chr9 34016635 874 - 123828236 GGCCAGTGTCCAAGTT-TTAGTCACCAAACTCAACTCTCCAAACTCAGTCTCCAGTTGTCACCCCTCACACAA---ACCACTCTTCCAGGGGAGACCGGTGCCCATGCTCTCACTAGCCCGGAGGCCCTAGGCACGCATCAGGCTA----CCACCGTGCGGAGTGGGCTTGCAGAGAACCACAGCACACTGAGCAGGC----CTGtctctgct-------aaagcttttctaccctgacatttgagg-aataaacaaaacataactccacccggagaagaggagaagagggaagcgatgacagcagatgagagatgtcgacggaattctagaagctggaaagcagatggccaatcggtagctgacttgggaaagtgacagaagctgagagctaaa-gcctgtgaggagaaatgatggagaagcaGAGGACTG-GAAGACCCGGGATCTCA--------GAGCACCTTATCTATCTGGGGCCAGCAGAGCTAA----------TCTGAAGGTTTCTA------------------------CTCCAAAGACCCAGGTAG--------------------ATCTAGC----------------------------------CTAGGAAGCCCAGTCACAGGC----------------AGGGCCCATAGTGGAGGATCCTACAGAGAAAGGGACACTAAGTGTCCCTTTGCACAGTGAAGACTGGGTCAC-CAGCAAGCCC--TGCCCTATCAGATA-TGACAGACAACAGCAGATGTGACAGATGTGACACTCTCCCAGGA------GAGTAGCGTCTTCTCTGGGTATCCTGAGTCACTCAGAAACATGAAGTCAGTTTCTAGCATTTAAGGATGCTCTCACTTCCCCCCCCCTCCCCCCACAGAACAGACGCACCCCAGTGAGCTCTTCATCGGTGACTCGGAAAGGCATAGCCAAAG-CTATAGATCTCCCAATAGGAAGCTGTTTCTCCCCTCTACATTCTGTATGTGAAAAGCTG a score=25950 s hg17.chr15_random 632806 1631 + 784346 GCGGCCCCTCCCCTCTCTCTGAGTGGGC------AGGGACAGCGGTTGCATGGGCAGCTTTCCTTAT-GATGCTACAGGTCCCTCTGGACATGCTGC-GCCTGGCCACGCCTCCTTTCCCTTTCATCTTTCTCACTGACCAATGGGCTTGGAACATTAAGGCCACGCCCCTATTCTG--CGTTCCATTGGTGCCCTGGTTACGCCACCTGTGGCTCAGTTGCACAGCTGCCTGGTAGGTGACTGGAGGCATTGAGCAGTGCTCACTGGTATTTCGCTGATGTGGCCCCAACCCCACCTCCCTCCCCACCCCGCGATGTCAGAAAAAACACAACAGGGGAAATTGGCCGCAGCCAAGAAAAAGGTAAAACACACCAGGTCATGGCCCCC--AACCCAGCCACAGATCCCCTCCGATGACAAGACCGGTG-CCAGAGTCCATACCACTCCTGAGGCATACCAGATGGGGCCCCCCAACCCCAGCCCCTCTGGGCTCCCCCAACCAAAGCCTAGTCAGTCAGCCCCACCCCTTCAGCAAGCAGCCCAGTCCCTGCCCTTGCCAATCACCCCAGGGTGACTTTGGGCAGGTGACTCCTGGGGCTCCCTGCTCCATAATCAGCCCTCACCTCCTGCCACCCCAAGCCCAACCTCCCTGGGCTCTTTGGGCTTGCGTCTCCCAGGACCTGGGTCCCCCAGCCCCAGGCCCTGCCCTCACCAGTCATCCCTGGGTGGCTTTGGGCTGGTGACTCCCGGGGCTCCCTACTGCAGACTCTGCCCTCCCCTCCTGCTGCCCCAAGCTCGACCTCCCTAGGCTTCTTGGGCTGGCGTCTCTGAGGACCTGGGTCGAAACCGTGTGTTTCCCTCCCCCATCGTGGAGCAGCGACTCGGGCATCGCGCTGATGTGGTCCCCTCCCCTGGGAGGAGTGGAATGCAATGATGTCACAGT-GCCCCTAGGAACTGTCATTACTGCTGCAAGACCAGCCTTTGATCTTACAACCCAGTCCCCTAAGTTTTCTCACCCCATTTCTGGTTCCTCTGGTTGCAGCACAAATTTCCAGCTGGAAGGGGAGTGGAGACTATGGGACCTAGGAGCAAGAGGTTTCAGGCTGCCTTACTCCCTTAACATAGACATTGACAGTGGGAAAAGCCTACACTTCCCCTGTGAGCTCAAAATGTTCACAGTATCTCTGGGTGGCAATGGGAGAATGGGTTTGGTTTGGTTTTTTCCCAGGCTTCTACTTTCCAGAGAGACTTTAACATTTTTTTCTGAGTTCTCCACGGTTCTGGGACCAGACTGCCCTTCAGTCAGTGGCCTCTGAAGTGAGATTTGCTCATCTTCTGTGGAATAGATCTTGGGAAACTGAACTTGACAGCTTGAATCTTCCTC---ATATCGTCTCAACCTGGGGTACTTTGAGTGCCACAGGATAAATGCGGGACATCTTTC-TGAAGCATCATTTTCCCTTGATTCTCTTGAG----AAAATGCATTAATGTACTTAGGGATGACAGACACATAGGTTTCCAAGCGTATACCAGACTTCGCTCTGAAATGAGGCTTGGGTTGTCCTCTTTCTGATAAATTCCCAGATTTAATAGAAAAGCTG------------------CCTTCTGCCATGAGGACACATTGATATGAAAGTGTGAGAGGTACTG s mm7.chr2 32295350 1310 + 182548267 GCGGTTCCGCCCCTGCTTCCCATAGGCCGCTGTGAGGGGTCATGGCTGCGCGCGCAGCTCTCGTCGTTAACTCCACCCGTCGCTCAGGCCTCGCGACCGCGTGGCCACGCCTCCCTGTC-GTTCATCGTTCTCATCAGCCAATGGGCTTGGAGAAGGTAGGTCACGCTGGGTTTCCGAGCGTCCAAGGGGCGCTCTGCACCCGCCTTCTCTGGCCC--TTGTAGAGAAGCC--GTAGCTTCCGGAAGCAGTTTCGCGGTGGCTGCCGGGATCGTGGTGATGTGGCCCCCCCGCTTCCCCCCTCCCCGCCCCGGGATGTCGGAAGAAACCAGGCAGAGCAAATTGGCTGCGGCCAAGAAAAAGGTAAAGCGCTCCGGGTCGCGGCCCCTTGACCCCACCC---GAGCTCCTCCAACGGCAGGACCCATGACCAGAGTCCGAGTCTTTCCCGAGACACACGGGTAGAAGAACC----CCTCAGCGCC-CTGGGCTCCCCCAG-TGAAGTCTTCTCAGCCAGCCCCGCCCCCTCAGCAA----CCCAGCCCCCGCCCTC-TCAGTCGCCCCTAGGTGACTTTGGTCA-GTGAC-ACAGGGTCTC------------TTAGCCCCCGGCTCCGGACGCTCCAATCCAGACCTCCCAGGGCACCT---------GTCTCCAAGGTCCTCGGTCCT---------GGCCCTG----------------------------------------------------------------------------------------------------TAG--------------------------------------------------------------------GCGACTCGGGCGTTG-------GTAGTAT------------GGAGTGGAATGTAGTTACGTCACAGTCCCCCCTCGAAACTGTCATTACTACTCCGAGTCTGG-TTTGGATTGCTCCACCTGCTCACCTAA-TGTTGTTGCCCCTTTTCCCGTTTCTCTGGTGG-AGAACCCATTTCCACCTGGAAGGGAGCCCAAG--TGTGGAATCTAGTGCGGAGACGCTGTAGGCGCCCGCATTCCCTTAACTTAG-CATTAG-------------------------TGTGAGCACAACACTGT--CAGCACCCCTTGCTGACA-----TGGATTGGTTTGGTTTGGATTT-----GGTTGTCTGCTCTCTAGAGAGACTGTAATCTCTCT----------------------GGAGCAAAACGCATGTTA--TAGTG----------------TTGATCA------GTG-------TCTTGGGGAACTGAACTT---AACTTAAAATTCAGCCAGAATGTCTTTTCCAACTGGGGTG--GTGAGAAGCACGGGATGCGGGTGAGGCATCTCACGGGAAACATCACTTTCCCATGCTTCTTTTGAGAGAAAAAAACCATAAAAGTCT---GGTTTGGCATTTTCATAGATTTGTAG---------AGACTTCTCTCTGCGATGA--CAAGGGCTGTGCCCTTTCTG-----TTCCCATGTTCACT---AAAGCCGTGGCTTCACGGTTTCTGCCCTTCTGTCATGTTGTAAACTTAGGAAGCAGGTTTAGGAAGTACTG a score=3594 s hg17.chr15_random 634496 253 + 784346 CAGTTCCTGCCTGCTTAATGTGTGCTTTTCTACCTCTGCCCCTGG-TTTTGGTCCCTGGAAGCTGCTGATTCATGGCAAAACCCCAGAGCTTGGAGTCAGAGGACT-GAGTTTAAGTTCCAGTATTGCCTTTTTTGATCTTTCTTT--------------------------------------------------------------------------------------TTTTTTTTTTCTATCCATGATATCAGTCCCTCTCAGTCACTAAGTGATTGTGACAACACCTTGTACAGTTGTTGGTGGCATTACATCAGATG---GTATATAAGGGTATTTT s mm7.chr2 32298571 326 + 182548267 CAATTCCTGCCAACTAAATGTTTACTCTCTGGTCTCTACCTTTAGATTTTTCCCTTTGGGAGCTGC------------AAACCCCAGAGCAGGGCATCAGAAGATTTGAGTTTAGATTCCGTGTTTGCCTCTGTGTGTATGTGTATGGGCATGTGTGTATGTtgctggaatggaatttagggcctcttgaatgctagccaagtattccactgagctacattcccaacccAATTACTACCTTTTTAGCCATG---CCATTTCTTCT--GCCATTAAGAGGTCATTATTATATCTTGTAGACTCGT-GGTACCATTACATGAGACTTACGTACATAAGAGTATTTT a score=13792 s hg17.chr15_random 634764 571 + 784346 GAGGATGTGGCTGTAGGGGCTGATCATTCTCATGAGTGTTACCGCTCTTCTTTCCCACAGTTAAAAGCATATTGGCAGAGGAAGAGCCCTGGCATTCCAGCAGGAGCTAACAGGAAAAAGAAAATC---AATGGCAGTAGCCCTGACACATTCATTTCTGGTGGTTACCACTCACCTGGGGATGTGAGTCTCGGCGGGCCAGGCTCCTGGGGACAGGGAGCCCAAGGGGCAGTAGAGGGTAATTGTTAAGATTGTAGATGGACTGTTGGGtactggttaagaattctggatttga-atcctgcctctccgtctgctaagaattgattaggg-------------------------------------------------------------------------attgattagc-atatga----tttagggcaagttgcttgaggtctttgggcctctcttttcacatctgtataatagaggtggtattttttgacttccatttgtgaagtttaaatgagattcgttattgttgcttttatgtgaat--ccttagtacatggcctgctgcaaacacccaggacaccgaggaaatggtcgttgctgttTGATTTTCCTCATCCCCAGTCTCAAGGGGAAGCCAGGCCAATGAGAA s mm7.chr2 32299347 633 + 182548267 GAGGCTGTGAGTGT-GAGGCAGATGGCTCTCATT--TCTCTCTGTTCTCCTTTCC-ACAGCTGAGAGAGTATCAGCAGAAGAACAGCCCGGGTGTTCCTGCAGGAGCAAAGAAGAAGAAAAAGATTAAAAATGGCCATAGCCCAGAGAGACCCACTGCCAGTGACTGTCAGTCACCAGAGAATGTGAGTCTTGGCCAA-CAGAGTCCTGTGGAATGGGGG--CAGGTGGGAAGAAGCGGGGAGGGCTGTGGTTCAAGTGGAAATGTCAGGTGCTGGTTAAAAAGTCTGGCTTTGAGGGCTTGTTGCCTAGTTCAATGGTAATGAACTAGGGCTCATCTCACAATGGCCCTGGGTTTTATCTCAGCACAGGAAAAATTaaatctgagtctgaattctatctctccatcagttggcaatatgataactttagggcaagttggttaaactctctgagcctctttttacatagctgtacaatagcggtaata-tttttaatgtgtatctataaagattaagtgaagtTTATTGCGGTTGTTTTTCTATTAATTCCCCTAGTGGAGGGTCTGCTGTGGA-------GTTAACAGTGAGCTAATAGGTACCGCTTGATTTTCTT-------GGTTTGGGGTAGAAATCAGACCAGAGGGAA a score=35077 s hg17.chr15_random 635377 1128 + 784346 GGGCCCCAGGGTGGGATGGTGGGGAGATAAGAACCACGAGAGAAGTTGGCACAAAGGAGTTATGGGAAAAAGGTTCCAAGATAGGCAGAAAAGAAGCTTTTGCCAGTTGATGGGGGAAGAAAGGAAGTCAGAGGGCTTAGACAGTGAGGGGGGACAGAACATCTCCATGTGCACTCTCATCTCTTGGAGTCAGCAACAGGTATCTACGGGGAGGGCCGTGCATCCTCTACTACCCTGCAGGATCTGGAGGTAAGAGGCCCTGGGCCGAGGTGCAGTGACCCTGCAGGCCAGCCCTCCAACCTCCTCCCACAGCAGGGGCTTGTTGCCCCTCTGCCAGCTGAGGCAGCCCACACACCCCCACCAGCCCTAATGATTATTCTCTCTACCCCTCCCCACAATCTTCCTCCAACTCCTTCTCTCTGCATGCACCTCAGAGCCAGTACCAAGAACTAGCAGTAGCCCTGGATTCAAGCTCCGCAATAATCAGTCAACTCACTGAAAACATCAATTCACTGGTAAGAGTCCAGTGGGGTCCCCTGATTACAGCTGGTCAATCCTGGACTCCAGTTTCCTCTTGGGGCCCTGAAGAAAGGGGCTA-GGGGCCCCTGATGCCAAGGGCAAATGGGGAGCTGGGCACCCAGGTCTCACCTGGAGGGACCCCAGAGCACAGAACATGCAGCATGGCTCTTCTGCACTGCCCTCTTTGCTGACTCTCTCTTCTCCAGACAC-CCCTGCTCTAGTCCTTGCCACACATGCCCTGGGGTTGTCACCTCTCT----GGGAAGCACTAGCCTgactggttgtcagaggtccatattcctgccctgcctcagtccctaatttgctttttgagtctggacaagccatctctcctctttatgctcgtgtttc----tggaggaggtagagagtatcaaaggtctcggttagctctgaa-agtcagagattTAAAGGcccctagaatggaaagctcagggcgaaggg--ctcctgtctgtcctttgctgttttatatctctgctatgaagaactgtacctggcctgtacatgctcagtaaatgtttgttgaatgaatgCACGTTTCTAAATCACAAACTGGCAGAAGGGGGGTGGGC--CTTTCTCAAACTCTGTCTCTGGA s mm7.chr2 32304663 1047 + 182548267 GAGCGGCGAGGTTGAGCCATGGCGGGAAAAGAGCCATAAGGAG---TGGCACAAAGGGGGTGTGAG---------------TGAGCAGGAAAGGAGATTCTGCTAGTTGA--GGGGGAAGTAGGAGGCTGCAGGGATTAGACATTGAGGGTC-ACAGAGCATCTCCATGTGAGGTATTGTCTCTCCTAGTCTACATCCTACATCAACGGGGAGGGCCTCACATCTTCCAACA---TGAAGGAACTGGAGGTGAGTGGCCTGGACTCATGGCCCAGCAACCCTTTACGCCAACA-GCCTATCTCCTCCTACAG---GGACCTGGGTGCCCGCTGCCAGCTGAGACAGCCCAC-CACCCCCACC---CCTAATGAT-GCTCTCTCTACCTTTCCCCCCATCCCTCCTCCAACTCCTCCTCTCTGCATGCGCCTCAGAACCGGTACCAAGAGCTAGCAGTAGCCCTGGACTCCAGCTATGTAACAAACAAACAACTCAGTAGCACGATAGAGGAATTGGTAAGAGTCCAGTGGGGT-CCCTGATTCTTGCT-GCCAGTCCTGGGCTTCAGTTTCCCCTTTGGGCTCTGAAGAAAGGGACTAGGGGGCCCCTGGGACCAAGGG-GAATGGAAAACCTGGGGCTTGAGTCTCAGCTGGAGGCA-CCCAGAGCATAGAGCATGCAGCATGGATCTTGTG-GCTCTCCTCTCTGCCTCCACTCTGTACTGCAGACTCATCCTG----AGTCCTCGCCCTACTTGTCCTGAGCTCGGTGCCTCCAGTAGAGGGGAACACAACCCCAGTTGGTTGTCAGGACCCCATGTCC---TATTGGCTTAGCCCCTCATTTGCTCTTTGATTTTGGCCACACCA------CTCCCTGGGTTTGAGTTTCCTGTTAGCAGATTTGGAGTGGGTCAGAGACCTCTGTCTACTCTGAAGAGGCAAGAGTTGGAAAGCTCATTGACTCA-----TCAGAAACAAGTGCTCTCCCATTCATCTCTTGGT-------------------------TGTGCCCA--CAAGACACGCTCAG--------TTTTAATTCGACACACTCTGCCAAGTCCCAAGTTGGCAGA----GGGTAGTCATCTTTCTCACACT-TGTTTCTAGA a score=14534 s hg17.chr15_random 636537 678 + 784346 CCCCCTTTGCTTTGGGTAGGTTCGCACATCTAAGGAGGAGAAGAAGCATGAGATACATCTGGTACAGAAGCTTGGGAGGAGCTTGTTCAAACTCAAAAACCAGACGGGTAAGATGGGGCTGGCATGACCTGGCAGCTGGACTGGCATTAGAGGGCTGTGGGGGTGACTTAGAATGCCCCAGGGAGGTGGGTGGATGGAAGGGCTTTGAGGCAGAGGGAAAGAGGTCTGTGCCAGGG-------GAggacaagtcttgtcatctcc-atgagcctcagtgtccccatcagtaaagagggagGAGTGCCCATTGTCAGCCACCCACAGTGCTCT-------------CTATCTGAAAGTGACTTGGAAGATTGTCTACCATCCGGGTGTGAGGAGTCATTAGCAGTGAGGCCAAGTTTGGGAAGCCTGAGAGGAGGAGCT---------GTGCACCAAAGGGAGGATTTTTTTTTTTTTTTTGAGAATCCAGAGGCCCTTATTCT--CTGCTTGCTTTCTCAGCTGAACCCCTGGCCCCACAGCCCCCAGCAGGGCCATCTAAGGTGGA---GCAGCTACAAGATGAGACCAACCACCTAAGGAAGGAGCTAGAGAGTGTGGGAAGACAGCTCCAGGCTGAGGTGGAAAACAATCAGATGTTGAGTCTCCTGAACAGGAGACAGGAGGAGAGGCTACGTGAACAGGAG-GAGAGGC s mm7.chr2 32310436 651 + 182548267 CCCCCTGTGCCTTGGGCAGGTGCATACACTGAAGGAAGAGAAGGAGCACAGAGAACGGCAGGTACAAGAGCTGGAGACCAGCTTGGCCGCACTCCGGAGTCAGATGGGTGAG-TAGCGCAAGGGTGACCTGAGAGCGGGAGTGGC-TCAAAGGCCAGTGG------CTTCCATAGCCCTGGGG--GCAAGGGGGTGTGAGAGCATTGTA--ATGGGGCAAAAGGTCTCTGTCAGGACTGACCAGGTGACACGCCTTGTCATCTCTTATGTCCCTCTGTGTA---------AAACAGGGTGGCATGCCTACTGCTATACCTCTGCAGGTGACTGAGCACCACAGAACTATACTAGAGTAGCTTGACACACT-TAGCTCATC------TGAGACCCTGACAGAAAAGAAGCCAG--------AGCTTGGGGCAGGGAGCCTGACTCCCAGTAGAGCCAAGAGAGGACC---------------------------CCCTCACTGTGCCTACTTCCTTTCTCAGAGGAGCCACCGCCTCCAGAGCCTCCAGCTGGGCCCTCCGAGGCGGAAGAGCAGCTGCAGGGAGAGGTCGAGCAGCTGCACAAGGAACTGGAGAGGCTGACGGGACAGCTACGGGCTCAGGTGCAGGACAATGAGAGCCTGAGCCACCTCAACCGGGAGCAGGAGGGGCGTCTGCTGGAGCTGGAGCGGGAGGC a score=3791 s hg17.chr15_random 637215 96 + 784346 TACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGG s mm7.chr9 2023352 96 - 123828236 TGTGGAAACAGGTGTGGAGGCTGTGGGCACAGGTGTGGAGGCTGTGGGCACAGGTGTGGAGACTGTGGGCATAGCTATGGAGACTGTGGGCACAGG a score=3438 s hg17.chr15_random 637319 901 + 784346 CCAGGGCAGGAGAGGCTGCTGGAAGAGGTGGAGAAGCTGTTAGAACAGGAGAGGCGGCAGGAGGAGCAGGAGAGGCTGCTGGAGAGGGAGAGGCTGCTGGACGAGGTGGAGGAGCTCCTGGAGCAGGAGAGGCTTCGGCAACAGGATGAGAGGCTGTGGCAGCAGGAGACTCTGCGGGAGCTGGAGAGGCTGCGGGAGCTGGAGAGGCTGCGGGAGCTGGAGAGGATGCTGGAGCTGGGGTGGGAAGCCCTGTACGAGCAGCGGGCCGAGCCACGCAGCGGCTTCGAGGAGCTGGTGCGTTGCCCCACCTGGGGAGGCTGCCCTCTTCcctagccctcaaggcctttgtttccccacctgtaaaatggggCATTGTAGCCTTCACATGAAATGGTACTTCTAAAGGCATCTGT-GAGCCAGAGCCCTGCTCTGATGGCTGTGGGAGAGAGGGGATATTTTTCTAACCTGCCTCCACCCTTCCCGGTGCCATGGGAG---GCAGACACTAAGTTCTGGGGTCTCCAGTTTTAGTGGGTGGCCACTGATTGCTTCTTTCTGTCCAGAACAACGAGAACAAG---------AGCACACTGCAGTTGGAGCAGCAAGTAAAG---GAGCTGG---AGAAGTCGGGTGAGCTGAA--AGAGACTGTAACCTCCGACCCATCCAAGAAGATGTGGGAGGCGGGCA--CCAGCCTCTGGGGAGGGGAGGTGCCAGGC--CACAGGC-AGCTGCAGCCTGGGGACAGGTGACCCCAGCACCCTCCGGGGCAGTCCTATGACTGTTTCTTGCTTCCTGCCCTCTGACTTTTAGAGGTGGGTAGCCCTGGGGTCCTCCCAGGTCTGGACATCATCATCCCAGCTAGAGGCATGGAGCCCCCCAATCACAGAGGAAGAGACAGTGGTATAAGAGGCTC s mm7.chr2 32311087 608 + 182548267 CCAGCGCTGGAGCG--------------------------------------AGCAGGCCGAGGAGCGCAAGCAGATCCTGGAGAGCA------TGCAGAGTGA-------------------------------CCGCACCACCAT------------CAGCAGAGCACTGTCACAGAAC-----------CGAGAGCTGAAG---------------------------------------------------GAGCAGCTGGCCGAGCTGCAGAACGGCTTCGTCAGGCTGGTGC--------------GAATCCTGCAGGCCCTCCTTGCTCACAGGGAATGTAACCCTCAA-----------GGGTGCTGTCCACCTCACATGAGGTGCTAGCTGTCAAAGCACCTCTCAATCCAGAGACCTG---TGGTG--TGTGGGAATGA-------------------TCCAGCAGTCTTCCCTGCTCTGTGGGAGGGAGCACACATGCAATTCTGGGGACCCCTGCCACATTAGGT-CCTACTGACTGCTGCCTTCTGTCCAGACCAATGAGAACATGGAGATCACCAGTGCGCTGCAGTCAGAGCAGCATGTCAAGAAAGAGCTAGCCCGGAAGCTGGGAGAGCTGCAGGAGAGACTGGGA-----------------GAGCTGAAGGAGACGGTAAGGCCTACCAC-------GGGGGGTGCCAGTCATAACAGTCTAACTGCAGCCTGG--------------AGCA--------GGCAGTCCTG-GACTGC----------------------------------------------------------------TCTTCATCTGTGCCAAGGCCA--GAAGCTGCTGTTTATAGTTGTAG-------GTTATATAAGGCTC a score=3740 s hg17.chr15_random 638550 484 + 784346 TAGATTCAAACTGGATTCCGGCCTCGGTTCCACTGGTCATAATTCAACTactttgcatctctaagtctctgtttctttaacttcaaaaggaagttagccttttccttgcagaggtgctgaggattaaatgagataatacgtg-gaaacattaggcat--gtagcacacttagcagatggtGGTTGGCTCCGCCTGCTTTTCCACCAGTCTGTGGCCTACAGTTTACATGCTGGGAAAAA-GGACGTGAGATTTGATGCTAGGGAAGGAGGCATGGGGTTCTAAGCAAGGGAGACAGTCTCTTAGGCCTGGAGCAAGGGGCCAGGGGCCTGGGCAGGCCACAGAGCCCCACAGTGCCCTCGCTACCCTATTAATGGGCCAGGAATCTGGAAGCCAGCCACCACATGTCCTCATGCCCAGGGTCTTCCGGCAGGTGGAGCTGAAGAGCCAAGAGGCTCCGAGTCTGCAGCAGCAGCCAGACCAGTACCTG s mm7.chr2 32311695 306 + 182548267 TGGGCTCAGGCTGGGTTCACATCCATGT-------------GTTCAAATGCTTCCCATCTCCAAA--CCCATTCACTGAACTTAAAAGATGAG-------TTTCCTCAGAGAAGTGTTAAAGGTTAAATGAGA-AATGTGCATAAAATATCAGGCACTAGTAGTTAGTGCAGAACAGGGTGGGTTGC----------TTTCCAC---TCT-TGGCCTAAAG------TGATGAGAAAGGTGGGTGTGA----------------------------------------------------------------------------------GGCTGGTTACAAAGGCAC-------------------------------------------------------TGCCCTCATTCCT--GGCCGTCCTGCAGGTGGAGCTCAAGAGCCAAGAAGCACAGGGTCTACAGGAGCAGCGAGACCAGTGCCTG a score=10511 s hg17.chr15_random 639037 388 + 784346 CCCCATTCCCACA-------AGGAGCTTGGATGTGCGGACAAGCAGGGTGGTGAGTAGAGCCCTCAGGCGGGGTGGGCAGGCAGGAGCAGGGGAGGC-TCGCACTGTGCCCAGATTCC---CACCCCCTCCCTCTCTCTGAAGATCTTAGTGAGCTGAGCCTCACTGATAGCATGGAGGCTGCACCGGGAGAGGACAGGGAGGGTTCTCCCCCATGACAACCCCACTGCACAGCAGATCCAGCAGCTGCTTCCTCTAATGCAGGACTCCCCAGGAGCACCCAGGCTTGAGTGGAGAAGCTGTTGGTACAGGAGAGGCGGCAGGAGGAGCAGGAGAGGCTGCATGCCATTCTTTT--CGGGCTGCCGAGAACAGGGAGCTAAACATCACCATCATCTAAGAG s mm7.chr2 32313577 357 + 182548267 CCCAGTGCCCACAGGCTCCCAGGAATTTGGTGCTGCTGACCAGCAGGATGGTGAGTAGAGCTGTT--GTCTCTTGGGAAGGCACAA--AGGGGAGGAGTCCCATGGCGTGCAGAGCCATGACCCCCTCCCCCTTTCTCTAAAGACCTCAGGGAGGTGAGCCTGGCTGACGATATAGAGCCTGCACAAGGAGAGG-CAGGGGTACCTGCTCCCCATGAGAACCCTACTGCACAGCAGATCATGCAGCTGCTGCGTGAGATCCAGAAC-CCCCGGGAGCGGCCAGGCCTGGGTAGCAACCCT--------------------------------------TGCATCCCCTTTTTCTACCGTGCCGATGAGAACGACGAGGTGAAGATCATGGTTGTATAAAAG a score=4204 s hg17.chr15_random 639472 52 + 784346 ATATCCTACACAATTCAtttacttcatttgaatgttagagccacttatgttt s mm7.chr12 4608702 52 + 117814103 ATCTCCTACACAATTCATTTACTTCGTTTGAATGTTAGAGCCACTTGTGATT a score=48839 s hg17.chr15_random 639634 1398 + 784346 atttatttttgtttctaatttataatttaaatttatttgtaaaaagttaaatGAGAGTGGGTCTTT----------CTCTCATGTTCACTCTGGCATCTTTTAGCATTTTTTT-----------AATTTGATAATTATAGGACGTTAGCATGCATATCGAGTTTGCCCTTATGTGGTGGGAGTTCAAACACACAAAGACCCACTGTATGCACACAACTGTTCTTGCTGGTTTGGGATAGGCTGCCATGCTTTTTTAATGTTAGTACAGCCTGTATATTCATTACGGAATTCAGATAAAATTTCCTTATGTTCTGCTGTTATGTTTGATCGAATCCTAATCACAGTGAGCTCTTCATTAGCTCAATATGTGGTTTGCCCT---------------------------------------------------------------------------CTGGAAACAGCCTTTCCCCCTTTTTCTGTGTATTGGGGATGGGAGTAATAACATTTTGGGGAGGTTTTTAAATCTCCCAGAAGAGGAAAGTGGCCTGCTTTGGCAGGTGTGTGCAGGATAGAATATGT---TTCATTTGTTCCGGTG--CCAAGAATGAGCGCTGTACTACGGTAGTTCCCTTAGGATTTGTATGTGCTCTAGGCTCATGAA----GATACTGCCTCATGAGCTGTGGCA-GTTGTACTCTTTTTTGATGACCTGAAAAGGGATTATTTCTGAGGAATGAAAGGCTCCCATCA-TGACTGTGGATGTGGAAAACCTTTTCTAGCTGAGAGCATTTATATCTACAATACATTTTAAAGTCAGAGTTCATGTTCCCTGTTTTAATCACATGACTACATGTCCCAGTACACAAAAGGGCACTGGTTGGCGTTCTCCTTAATGTATTTAGTAAAGATCAGAAGAAATCCTTTAAGAGTTTA-AATGCCCCTGGAACAGGCATATACAGGCTCTAGTCAAGAATGAATTCGAGTGAAGGAAAGCTGTGTGACACCTGGCATTCCTCTGTGTTCATGGAGCTTATTTGAGGCTAGAAGATGGATTTTACCATCTAGACCTCTCTGGCTAATAGCTAGTCTTCAAC-------CATCTGACATAGGAATTTACTTCTTTTCCTTGAATGGAGAACACTTTAAAAATAATAACAAACATTATTATAAACTAATATATGTGAGAGTACTTAGTTGAAACAAAAAGGAGTTTTAGTAGACAGTATTATACTACATTTGAAAATCAAGGAGCAGTTTATGCAACGTAAAACGTTTACAAACTGCAGCACAATCTACTGTTCGTGAATGTCAAAGTGTCATGAGGAAAGTGTCTATACAATCACAGAGTTATATTTCCTCACAAAGTTCTTTACAAAGAGTGAAATATGTTTTTATACCTCTCAGTTTCAGTTAGAGGCATATTTTGTGTAATATTTATG-----------GCTTAAAATGGACTAAAGGTCCTGTTCTTGCCTTG---------------------------------------------------------------TCTGAACTTGCCGCTTTTGCATTCTT s mm7.chr12 4608754 1535 + 117814103 ATTTCTATGTGTTTCTAATTTACAGTTAAAATTTATTTGTAACAATTTCAAGGATAGTGGGTCTTTGTGTGGCTTTCCCTGCTGTTCTCTCTGGCATCCTTTAGCATTTTTCTTCTTTTTTAAAAATTTGGCACTTGTAGGTCATTAGCATGCATATTCAGTTTGCCCTTACGTGGTGGGAGTACAAACACACAAAGACCCACTAT-TGCACA-AACTGTTCTCTCTGGTTTGGAATGGTCTGCCATGCTTTTCCAATGCTCTTGCAAATTATATATTCATTACAGATTTCAGATGATGTTTGCTTATGTTCTGCTATTATATTTGATCTAACCCTAATCACAA-GGGCCCATAATTGGCTCCATCTGTGATTTGCCCTCAAATAAGCACTGTCTGTTACTTTCTAATATGCTACTATGAGTACCAATAGTTAGGTTTGTTTGAAGGCCACGAACTGGAAATAGCCTTTTCTATATTTTCTCTGTAAACCGAGCAGGAGCACTAACA-TTGGGGGACCTTGCCTGGTCTCACAGAAGAAGAAAGCAGTGTGCTCTGACCACTGAATGTAGAGTAGTGAATGTAGAGTAGTCTGCCTCAGCTGCCCACGAATGAACGCGGGCCTAGGGCAGTTTCCTTATGGTCT-TAGGTGCTCCAGGCTGCAGAGCTCCCAAACTGCTC--TGGGCTCCAGCACACAGTG--CTTTATTGATGACATAAACATAGACTGTTT-TCAAGAATGGAAAGTTTCCATCACTGACGGT-AAGGTAAGAAACCATCCCTATCTTAGAGCACTTATATCAACAATATATTCTAAGGT-AGACTTTATGTTACCT-CTGTAGTCAGGTGACCACTTACCCTAGTATACAAAATAACACTTGTTGGCATT---CATAATGCATTTAGTAAAATCCATAAGGAAACCTTAAAGAGTTTGTAGCAAACCTGAAGCCGACATGT--AGGCTTTAGCCAAGGACCCAT---AGCATAGGGAGAGCACACGAGAGCTGGCATTCCTCTGTGCCCAGGAGGCTTCTT--AAGC--GATTATTGATGTTACTGTCTACATGTTACTGGTTAATAG-TCGTCTCCCACATTGGCTATTTTGGCATAGAATTTTACTTC-TTCCTTTGAGTGGAAAGCACCCTAAACATAAT---AGACATTATTATAAATTAATATGTGTGATAGCACTTAGCTGATAT------GAGTTTTAAT--ACAGTATTAAACCATATTTGAAAATCAATGAACAGTTTATGCAGTTTAAAATGTTTACAAATTGCCGTGCAATCTACTGTTTGTG-------AAATGTC---AGATAGGTGTATATACAAT--TAGAGTCCTA-CTCCTCACAGCATTCTTTG-AGAAAGTAAACCATGCTTTTATACCTCTCGCTTTAATTTAAAGGCATATTTTGTGCAATATTTATGTTAATGTGCCTATATATAATGAATGAATTATTACAATCGTGCATTGCCTAAATCATGACTTGAGGGGAAAAAAACAACAGTTTAGTTACAGTTTTACAAAACCCAAATATCTGTACTGGAAACATTCACATTCTT a score=255 s hg17.chr15_random 641032 43 + 784346 TGAGTTCAGTTTAAAGA-------------------CAGTTACTTTAAG------------CCCATTTTAAACC s mm7.chr12 4610406 74 + 117814103 TAATTTCAATTTACAGATGGGTAAGAGAATTGCCTGCAGTCACTAAATGACAATGCAAAGACTGATTTCAAACT a score=4457 s hg17.chr15_random 641075 140 + 784346 CTCAGGCTAGAAATCGTACCACTGTTAATTAGCCACATTATTTGGTCTA--ACAGTTTTTGTTTATCATTCTGAAACTGAGCTTACCTAATACATTGATAAATTATTTCAAAGGTATTTTTATAGTTCAAATCGCTTCACTT s mm7.chr12 4610581 141 + 117814103 CTGAGCTCAGAAAGC-CAGCCCCACTAACTAACTGCATTGTTTCATAAAGTACCTTTTTTCTTTATAATTTTTATTTGGGGCTTCTCTACTATACTTATAAATTTATCCAAAAGTATTTTTATAGGTCAAATCCCTTGACTT a score=33230 s hg17.chr15_random 641230 1077 + 784346 TAAATGACTAGGAATGACCTTCAGATAGCGTTTAGCAACTGTAACCAATCTGACAATAATGTGTTCATCAGGTA----CCTGTGGATTAAATCACATACTGGC---ATATTTAAGCTGAATGTCAGTCTGAAAAATAAATGTACTATATTAACTCAAATACCACTCTCTGTGTAGGTATTTTGTCATATGTTTAAGAAAAAGCTAAAGAGAATGGAAATCctatgacaataactatgacaataactatgacaaGTCTTTCTTCAAAGTGCATGCAGTCTTTTGCAGTACCTCATTCAGCCAAGTATTTGTTCTCTACCTCATTCAGTATAAGGCAGCCTTTAATTTGCTTAGAAGGCAACATTAGAAGGTTAGAGTTCAGCAGGAACATAGAATTTTAAAATGTGACTTCAACTGAATAAATTTGAATTTCTGTAGGGAGTAAAGAATCAAAACACCTATTTAAAGACTGCAAAATATGATAATTATTTTTAAAGTAATTGATTAAACCTGGTAGGTTTTCCCAAAATGAAAAACAATCAGTTCTAAAACCAAAGCTGAT-TTTTAGAAAATGTGAAA-ATGTAAATCAACCCTATCCATAACAGATTCTCTAAAACTTTATCTTACAGTCACTTTCAAATAACTATTCAAAAATGTAACTGCTATATTAACGTCttaaaataatttaaaacattttaaaatatGA----ATACTGTAGTTTAAAACAAAGAATCTAGG---GGAAGGAAAAGTAGACAAAGAAATGCCAATTCCAGTCCAAAGCTGTATTTGCCAAGTTTTCTTAGAATGACTTTTACCGATTTATGAATTCTTATACACAGAATGCATAATGGAAATACTGA---TTTTTGTCTAAAGTGGCATTATTGACTGCTGCTGTGATGCTACTATAATGTAATACATTATTAAATTGTTTCAAGGTGCTGT-TTTGCCTAAAA-----ATTTTGTGTGTCTTGAAAACTATAGTACT--GGGTATTGAGACCCTGCAAATTCTCGGCATGCTTGGCATGAGGTAATCGGTTTTTATTCTTACAAAATTG-----TAACTATGTAAGTGTGTTTATTAAAAGAACACAAACT s mm7.chr12 4610898 998 + 117814103 TAGATTCTTGGAACTGGCATTCAGGTTGAGCTCAGCATCTGCAATCAGTCTGAAAATA---TGTTTAACAGGTAGGTGCCTGCGGAGTAAGTCACATACTGGCCCAACAATCAAAGCAAATGTCAGTACAGCAAGTAAACTCACTGTGCTAAC-CGACTACTACTC------TAGGCATTTCATCATA--CCTGATAGAAAGCTGCA-AGAAAGGAGATGA-GTGACA--------TACAATCGTT----TACATTGTTCTTATAAGTGCATGCAATCTGTTGCAATCCCTCATCCAGCCGTGTGTTTGCTTTCTTCCTGATTTAAAGTAAGGCAGCTTCTG--TTGCTTAG--------------------GACTTTCTTGGAGACAT--AATTTACACATTAGAACACAG-TGGATCAACTTGAACT--TGTAGG-------------ATACACCAGTTT-AAGAGCACACTGTGTGACAGGCATTTCTAAAGCATGCACTTGAACTTGATGGGTGTTCCAGCAGTGAAGAA-----AAGGCTATAGCCAAAGCTGTTATTTTAGAAAATTTAAAACCTAAAAGTTAACCTTATTGATCATATACTTTCT----CTGATTCTTTGAGAAATTTTGAAAT-----------AATGTAAT-------------ACTTAAAACAGT---AATTGTTTTAAAATACAACGCGATACTAGAGTTCAAAAGAAAATGATTAGGGCTGAGAGAAAAGGCAGAGAAAGAAATGGCAGGTCCAGTCCAAAGCTTTATTTGCCAAGTTTTCTTAG-ATGAAATTTACCAAGTTATGAGTTCTTGTA-----AATACGTAACAG-AATACTGAGACCCTGTGCCTGAA-TGGCATTATTAgatgctgctgtgatgctgctgtgatgTAATAAACTATTAACTTGTTGCAAAGTGATGTATTTGCCTTAAATTTTTATTTTGTGTGTCTTGAAAACTATAGTATTAAAGGTATTGAGATTGTGCAAATGCTGGGCACGCTTGGCATGAAATAATCTGTTTTTATTTTTACACAATTGTAATATAACTATGCAAGTGTGTTTATTAAAAGAACACAAACT a score=53437 s hg17.chr15_random 642760 1779 + 784346 CTCACCAAAGCAACTTTTCCCTCAGGGGGGCTCCCATCTTCTT-----ACTCAGAGAGGCAGCTGAGGCGGG----------------------ACAGTGGAGTTAACTGTAGACCAGGCCAGGGCACAGGCTGCTGGGGT----TGGCC--CCCCTTCCCCCGTGTACATACTGTAGCTGTGTAACATTCTGTAT---------------------TGTACC-TAGCGGAGGTTGCAGCTGGCATATGAGGAAGAGGTTCTTATAATTATTCGCGGCTGGGAAACTTATTTATTGCTAGCATAGGAGCGA--GGAAGGAGGCGGGGATGGGGTCATGGCTCCCTGGTGATGGGACTCCTGTTTTTTTTTTTTTTTTTGCTTTTGATTTTGGAA-TAAATGGATTTAGCCATACTGCTCGGCCTGGTATGTTC-CCATTTCCCTCACTGGGTCCTGCAGTTTGTCCCA--------CTGAATGAGGAGC--------CCCAGAGTGTCTCAGCATGTCCAGCTGGGCTGT-TGGGG---------------ACCTTCCAGG-----------CCTGTTACCTGTATGCTGCCTGGTGACACCTGGTGGATTTTATGGGGACTGCCATGGCGCCTACGGAGTACACTCTGGCCCTGACAG------CCAACTGGTTGAGA------AGCCTGA--TCTAGCTGTGGCAGGGAAGAC--AGATACCAGTGCCCAAGGGCACTGACTTCCATCCACCCCACGTGTCTTCCATTCCGTCCCCCTGCCTCCCTCTCCTGTCTGCACCGGGTGGCCTGTCTGTCCCTCCAGAGTGCCGGCTGCCCCGCAGGTTCCCTCCAGGCTGAGTTCAGGGCCCTGCCCC-TAGTGGCCAGAGCTGGCTTCACAGGGTAAGAGCCAGCTAAGCTCCAGGGACTTTCCAGGAAAAGTGTCCCTTGAAAAGGGTGTGACCTTTTCACTGCTCCCAACAACACCCTAAAAATGGCTTGGCCTTTTCCATCCCCTGAGCTCCATAGAGAACACAGCCAGCAGAGG-ACAC---ATTCTCTGTCATCCAGAAATGGGTTT----CTCAGTCAAGGGACAGCAGGACTGGTAGAGACTGTCAGGCCACACAGCTGC--CTGC-ACAGCACCGCCATGCTTGGCCAGAAGGGCGGGAGGGATGGC--GGGGGCTGGCTGTCCACAGGCCGCGCATGTCCCGGAAGCTCACTGGAGGTGGTGCACTTTGGAGGGGCGATGTCAGGA-GACAGCTTCCTCTTGCTGGTCTACAAGACTCCACAAGCACAGCACGGGGACTGATTCCCAGTGCTAGAGGTGAGGCAGTTGGCCACgtgtatatatgtatatgtgtgtgtgtgtgtgtgtgtgtgtgtgAGAGAGAGAATTTATAGCTATTTATAGAACAGGGCAGGGGCA-TACCACAGAGGGGGCACAAGTTTCAGCAATGGTCACACCTGGACGTGTCAGCTCACCGCTACAACAGACTAAGTCACAGAAGAAGG---GGGCTGGCTTTGGAGCTGGGGGAGCCACTGTCAAGTCACAGGACACCCGCCCAGGCAGGCTTGGAAAGGGAGGTCTCTGAGAAG----AGGGATCTGTTTAGAGGTCGAAGTGGGGCCTGGGGCTCTCAGGATGGGATGGACTTGCCTGACCCGATCAGCTGGCAGTTGGAGAGAAAGCAGAGAGAAAACGGGTTAGAGAAAAGCC---AGAGCTGGTGAGGCAAGTGCAGAGTATGGGTGCGCTGCAGCAGCTGTGGAGGGCCGGGGAGGGGAGGGCGTAGGTGTGGGCAT-GGCAAGGTTCCTGGAAAAGAGGGGCTGGAAGGGAAAGGGGAGGAAGATGGAGGGAGAAGCCGGAGCTTCATAGGTAGTGCCTGGGGACTGCGGCGGCCCTCCCT s mm7.chr2 32314830 1762 + 182548267 CTCAGGAAGGCA---TCCCACTTTGGAGGGCTTCCATCTTTTTGAGGCACTTTGGGA--CAGGGAAAGTGGGTACCATTCTCTCAGGCCTTATGACAATTGGGGTAACT--ACGCCAAGC-AGGACAGAGGCTGCTGGGGCAGGGTGGCCTTCCCCTCCCCCGGTGTACATATTGTACCTGTGTACTATTTTGTATATACCGGGGTAGGGACACCCCTGTATCATAGTGGAGGTTGGAGCTGGCAAATG-GGAAGAGCTTCTAATAATCACTTTGGGCTGGGAACCTTATTTATTGGTAGTGTTAGGTCAGAGGGCAGGAGGCGGAGACAAGGTTGTGGC-ACCTGCTGATGCAGCTCCT---------CTTTATTTTGCTTTTTACTTGGGAAATAAATGGATTTAGCCATACTGCTGGGCCTAGGGTGTTCGTCATT----------GGTTCTGGGGTTAGCCTCAGGCTGGCACTGAGCAGGGAATGTGTCCTGCCTGGAGAG----AGCAGGCTT--CTGGCCTGTATGGAGCCCAAGGTCTGAAGTGCCTGGCAGGGCTGATTGACACCTATCACCTATACACTGCCTATTGAAGCCTAG-GGACCCCAGGGGGAGTACCATGGGGC-TACAGGG---------------ACAGAGCTTCCTTACTGAGTAAGAGAGTCAAGCCTGACATATAGTATACATAGGTGGGACTCGGGGTGCAGCAACTAAGGGCGCTGACTTCCAGGC----CAGGCCTCTTACATTCCGACCCTT---CCCCTTAGTCTGTCCACACTAGA-GACCTGTTTTGTTCTTTAGGCTGTT--------CACAG----CATCCTGGCTGAGCTCATGATACTGCCCCCTAGTGGTGTAAGCAGGATTCGTAGGATGAGGACCTGCTAAACTC---------------ACAAGCA-CCCTAGCAAGGG------CCTTTCCTC-----------ACCCTCCATTCAGTGCCCAGTTTACACCGTCCTCTCAGCCCCAGAGAATACA-AACCAGCAGAGGTACACGCAATTCCCCATGATCCAGAAATGGGTTTTATTCTCAGCCAAGAGACAGCAAGACTGGTGGCTACCAGAGAACTGCACAGCTGCTGCTGCTGCAGCATCCCCTTGCT------GCAGGGTTGG---GATGGCCAAGGGGATGGCTGTTCACAGGCCAGG-AGGACAGGGGGGCTCACTGGAGGTGGTACACTGGAGGGGGG-GTTGTCAGGATGACAGCGTTCCCTTGTTGGACCACAAGACTCCACAAGGACAGCATGGTGGTTGATTCTGA-CACTACAGGCGAGGCTGT--GTCAGCCatatatatgtatatatatgtatatataggtat------------------atttatagatatttataGAATGTCGCAGGAGCAATACCACAGAGGGG-CACAAGTTTTCACCAACATCACATCTGGATGTGTCAGCTCACCACTACAACAGACTAAGTCACAGATGATGAATAGGAC--GCTTTGGGGCCGGGGGAGCCACTGTCAAGTCACAGAACAGCTGTCCAGGCAGGCTTGGTAAGGGAGGTCTCCGAGGAGTAGGAGGGATCTGGTTAGAGGTCGAAGGGGGGCCTGGGGCTCTCAGGACGGGACGGACTTGCCTGACCCGATCGGCTGGCAGTTGGAGAGAAAGCCGAGAGAGAACGGAAGAGAGAAAAGGAAGGAGAGCTGGTAAGGCAAGAGCA--------GCCACCTCCAGCAG------------AGGCAGGGGCTGAGGCAGGTGTGGATGTGGGCAGGGTTCCCGGAAGAGATGCACAGTTGATGAATGAAAGGGAAGATGGGGTGCTGGGCCGTAAC-TAGCAGGTAGTCTGAGTAGAGGCTGGTGGCCCTCTCT a score=55053 s hg17.chr15_random 644540 1698 + 784346 CCCCACACACGCTGGCCTGTCTCATGGAACCCAGGCAATCCACCCATCCACCCACAGTTCAGACCAATGCCACCTCCCTCGGGCTTCCCTCTTCTGTGGTCCCCATGTCTTCCAACCCACTGGCCCAGGGCCACCTCTTG-CTTGGAGAGCCCCATCCAACAGCCACCAGACCTGATAGAGAAGGAACACTGATTGAACCAAAATGGTGGAGCTATAAGGGATGGCTGGCTGGAGTGAATGCCAGAGGCCCCTCTGGGCCATCAGAAAGCCCAGGGTCCTCTGAGGGACCCTGGGGAAGGCAGGGAGGGCAGGTAGCCGGATGCCATTGGCCATAGACTTCTAATTCTAACAGGGGAGCCTCAACTGGTTGGCGGGGGGCTGCAGGTTACATAGGTGAGGCTGGGCCCTTCCTGCT-GGGAAAAGCAGAAGAGGGAGACTCCGCGGCAGGA-------------AAGGGAAGTGAGCTCT--------CTAGGTGGAGCTCAGCTGG---------GCCAGCAG---------CACTATTGGCTGAATAGCACAGGCGACCCCTAGAAGCAACAGGCCAAGGTGCGTGAGCCTGCTGGCCAGCAGTAGTGCTTCAGCAGGGGCCAGGGACCCTGCCTTCAGTCGCACGCTAGCAGCTATCATGGTACCTGGGAGGGAGGGAAGGGGGCTGTGTGTCCTTCCATGGCCTATGAAGTGTGTTGTGGGATGACCGCGTGTATAGGACTCTCAGGCTTTTATCCTAGATCACCACTGGATTGCTGACAGATAGAGGACGTGGGACCGTGACTATCACCCCTAATCTGCAGTGGATTTGGCTCTTGGCACTCCCAGGCTGGGAGCTGGA--TACCTGCCCTGGCAGCATGACTCAGACTGCATGACAGGTACGGCGTGTCCAGGATGATGTGCCCAGGCCTCTGGCCGCCTGAGTCCAGCCCCCCACACAACCCCCTCCAAGCTCCCAGCCCCTACACCATAAACCATGAGCTCTGTGCCCTCTCTGATGGTTCCACATCTGCCACCTTGGGCATGGAGCCTGTTGTAAGAGCCCCCAGGCTCAGCCATGGAGACCTTGAGCAGTGGCACTGAGTCCCGTGGCTCACAGG-GAGCAAAGTGAGACAGCCAGCAGCACAAGGACAGAAAGAGGAAAGAGCAAGTCTGCAGCTCCAGAAGGGAGGGGCAGGGAGCCTGGCTCTGAGGCTCCAGGTATGCCCCCTGTGTGGAGCTGGGGCAGC---------GGGGCAGGCAGACCATTCATGCAGCAGGCAGTGAGGCATGTACCTACCATGGCTGATGCTCCTCAGGGGCCACTGATAGTGATTCTGAAAGACAGCTTCAAATC-ACATGGCAGGTCAC--ATGCATGGGTGGGGCAGGCCTGGGGGTGGGGGACACACACACGCACATGCCGGAGTGTGCACACACATGCTGTGAGGCCCCACGGCCC-ACATGCACACGCTAACACACATGCCCACAAACAACACGCATACGTCGCCCTCCCCGCCACCTCCCAATGCCCAGCACCCTCACCGGCCGGCA---CGTGCCACATGGATCTGGGGCGTGCAGCCACACGGCACACTGAAGCACATGCGTGGGCAGAGTCACAACACAGATGCTCACCTGCACACAG-AGGCATTTGCACCAGCTCCCTGCACACTCGTGCCTGGCGTGCTCAGAGGACCACCCATGCTGCTCACGGA---GACAGGGCTTGCTCACTAATGTCCGGCT s mm7.chr2 32316592 1609 + 182548267 TGCCACACACAC-GGCCTCTCACACACCACCCAGGCAATGCA---------CCACA------------------------GGGCCTCCCTCATTTTTGCTCAC--TGTCTCTCATCTCACTGGCTCAGGGCCACCCCAAGCCTCAGGGAGTCCCATGTAACAGCCATGAGGCC------AGAAG------TGCTTGAACCAGGAGATTGAAGCTAAAGGGGA----TGGCTGGAGGGAGCGCTGGAGGCCCCTC-AGGTGGTCAGAAAGTCAGGAGTCCTCTGAGGGGACCCTGGGGAGGCTGGGA-GGCAGGCAGCC-GATGCCTGCGGCCACAGACTTATAAGTCTAAGAGGGGAGCCTCCGTTGGT---CGGGGGGCTGCAGGTCTCGTAGGTGAGGCTGGGCCCTTCCTGCTGGGGAAAAGCAGAAGGGTGAGCGTCAATGGCTGGGGAAGAGTTGGGACAGGGTAACCGAGATCTGTGGCCAGCCAGGCAGAACTCAAGTTGACTTTCCCAGTCAGTAGACAATGCATTGCCTTCGGCTAAAAGGCACAGGTCACTCTGAA----AACAGGTCAA-ATGTTGGAGCTGATGGGCTGGC------TCTATGTCGGGGGCTGACGAGGTGGCTGTTAGCTACAGGTGTGCAA-------------TGTCAAGGATGAATGAG--------ATCCTCACCTTGCCTGCGAG--CCCTCAGGCGCTGGCAGAAAGGCAAAGGCTCTTAAG---TTGTCTAAAGTCACCA----------GTCAGAGCCTGGCTTTGCCAGCGCGATTCTCATGCTTGCCCTGTGGTGAATTTAG-TCGCCATGCTCCTAGGCTGGAAGGAGAAAGCTCTTATCTTGGCAGCATAGTTCAGAGT-------AGGTATG--------AAGAGGGGGTCCTAACGCTTCTGGCCCC-----TTCAGAGGCTGAAGACACCCTCTCCTAGTTCTTAGTCCCTACACTGTCAACAGTGG--TCTGGTGTCTCCAGGGAGCACCCACATCTACCGTCTTGGACATGAAACCTGTTCCAAGAGCCCTCAGTTTAAGCAA-GAAGGCCTTGAGTAGTGGCGCTGAGTCCCGAGGCTCACTGGAAAGGGAAGTGAGAGAGCCAGCTGGAAGAGGACAGGAAGAGG-------GAGTCCAGAGCTGCAGGAGAAGGAGG--AGGGGCCTGGCTCAGGGGTCCCAGG--TGTCCTCAGCATGGAGCTGGTGCAGCGAGGAGGGAGGGGTAGACACACTGTTCATGCAGCAGGCTGAGA-GCATA-ACCTACCGTAGCTGACACTCCTCAGGGGTCACTGATAGTGATTCTGAAAGACAGCACGAAATCAACAGGGCAGTTCACAAACACACAGGTGGGCCAGGCTGGGGGTTAGGGGACACACACACGCACACGCCTGGGCGTGCACACACATGCTGTGAGGCCTTAAGGCCCTGCGTGCACACGTTAACACACATGCCCACA---AACACGCATATATCTCCCTC----CCACCTCCCAGTGCCCAGCACCATTGCCGGCCAATACGTCGTGCAGCACGGATCTGGGACATGCAGCCACTCAGCACACAGAAGCACACGCATGAGC--TGTCACAACACAGAAGCTCGCCTGCACAGAGAAGGCCTTTGCACCAGCTCCCTGCACATCCAGGCCTGGTGTGCTGACAGGGTTA-CCATAGGGCTC-CGTAAAGGACAGGGCTTGCACTTTAGGATCCAGCt a score=1854 s hg17.chr15_random 647129 68 + 784346 CTTGAAGCATGCTCTTCTTAACACAGTTAGCTCTAGGCACATGGTTGGTGCTAAAAAGGAAA----AAAAAA s mm7.chr9 68667266 62 - 123828236 cTTGAAGCACGCTTTTCTTGAC----------CCTGACACATGGTTACTGCTGAAACTGATACATAGAAAGC a score=17073 s hg17.chr15_random 647197 898 + 784346 AGAAGAGCATTATGTCAATTTCATTGATTAACAAAAGCGATGGCTCCACTGCAAAGCAAAGTTGATACTCCTGGGCCTCTGAGTTCAAGAGCCTTTTAGACAAATGGCTCTGAGCTAAAACATGATCATGCATGCATATGCATCTGTCTTGGTCTGATGAGATAATCTGGATACTTGCTTGTTATCCTTGAGCATTTTCCTGCCTCATTAATGTATGTGTAGCCACCACAATAATAATCATAGCTAATAATGGCTACAGCTGAGGGCTTTCCTGAACCAGGCAGTGGTTTTAAAAACTTTAACCCCTAAAGCTGAGGACTTTCCTAAGCTAGATAGTGGCTTTGAAAACTTTAAAGTTTTCACATAGACTGTC--ATTGAATAATTTCTGTTTTTCAGATCAAGAAACTGAGACTTACTATCATATTTGGGATTAAGCTAAAAAAAAAAAAAAAAGAAaagaaacagaggctgaacgctgtcaagtatttcacagccagcagg----aaatcggaacttgaacccaggcagtctagccctgggatcctttccccttacccattat-----CCAGTGTTGGCTACACAAAACTAATGAGTACATATTTTCAACTATAGTTTAAGTGGGTGACATATTTTTCACTATATTTTATGTAGGTGACTTTCAGTTTGGGGGTATTCTACTTACACAATCTATTGAGCTGGATATTAACTGAGAGCAAACAGAA------ACTAATGAACTCTGAAAAACATAAAACATGAGCAACATGACGTCACTGCAAGAGACAAAACAGCACATAGCCTTCTTGTGACTGTATTTTGCTGACAGTCCATGAGCTGATA----GCCTGAACTCAGCAGTGCTGTTCCCTTGGGAGacacacacacacacacacacacacacacacacacacac s mm7.chr9 68667610 697 - 123828236 aGCAGGGTGTTATGTCAACTTTATTTATCAGGCCATGTGACAGCTGTGCTGTAATGCAAA----------CTGAGCA-CTGAGTTCAAGAGCCTTGCTAGAACAGGGCTTTGAGCTAAGGCAAGAGCATGTAGATGTATGCTCCT--CCTACCGTGAACACACATTCAG-----CTG-TGGTTAT----GAGTACTTTTCTGTCTCACTAATGTATGTGTTGTCAGAATGGTAGTGATCAT-----------------GCTTGTGGCTTTC-TGAACCAGGGAGTGT-----------------------GCTGAT----------------------------------------TTTTCACAC---CTGTCTCAGTTAATAATCCCTGCTA--CACACTAAGCAACTAAGAC-------CATA--------------------------------------------------AGCTGTTGTGTATTTTACAGCCTGTGTGTGCTGAGCCCGTATCTGAGCCCAG----------------ATCCTATGCCCTTGGTCATTATAGAATCTAGAGTCAGCTATACAAAATTG--GGGTGTGTGTTTTCAACTAT-GTCTAAA-----------------------------GTAGGTGACTGTGAGTTTGGAAGAATTCTACTTATACAATCCATTGAAATTAGATTAGATTGAGAACAACAAGAACAAAACCCTaatgatctttg-------tacaacagaagccacacgatgtcact-ccAGAGATGAGGCAGCATGTGGCTTTCTCGTGAACATCTTTTGCCAGCAGATTGTGAGCTAATAATCTGCCTGTAGCCAGCAGTGCCTGTTCATTGGGacacacacacacacacacacacacacacacacacacacac a score=27989 s hg17.chr15_random 648283 907 + 784346 GGTGCGCAGGGGGCGCGCGGGTTGAGGGGAGAGGGGCGACGGG----TGTGAGGGGCGAGAGGGACGGGAGCGGGGTAGGGGCAGCCCTTTCCCAGGCGGTAGCGGGGACTGTGGTGCTGTTGCCCTTTTAAGCTGCGGCTTGACAGGAGCAGCGTCTCCTGTCGGTGGAGTCTGTTACAAGGGGAGCAGCCGCCCAGGCCGCCACACA---------------GCTC---------CCCGCAGAGGCCTCGGTGCCCCTTGCCATTTTCCAGCCCTACTCCGAATAGAGTTGAGGCATCAGGGAGAGGCGGAGCTGGGAGAGCGCCGCCGAGA--GGTCCCGCGGG-TGGTTGCGGCCGTGACAGCGGCTCCCGACG--GGCTCACCTTCCGCGCCCCTCCCGCCAGAGGTGAGAGTAAAATGTCCGTGTGAGGGTTCAAGGCCAAGCTGAGGTTGTTGGCCTCTATCTTCCACAAGAACCAGGA------------------------------------------------------------------------------------------GCCGCCGCCGCAGCTCACGCTCCACTGCAACATCACGGTGAGGCGCCCAGTGGCGGCCTCACGGGGCAGGGCGAGGGCGGAGAGGAGGCGCCCAGAGTCCCGGGACAAAGGGGAGCCTGCCCGGGAGAGGCCCCGGTTCCCCAGGCGGGGCGAGCGCGCCCCTTTCTCCCGCGTCTGGCCCGCCCCGCTGTGTGAG--GCTTGCGTGGGAGGAGGGGGAGGGCGCGTCTCTCTGGCTCCTTGCCGCGGGGCTGGCTTGGGGGCTGCCGGCACCTCTCGCCCCAGTCGCTGCGCCCTGAGGTGGGAGCCCGCGTCGCCCGCAGACCTTTTGGGGCCCATGATCGCCCTCAGTCAGCTAGCCTGCTCCCCTGGACCGCGACG-GGGCGTGGCAGGGCGGCTCCCGCTGTTGTTTGAGCCCAGTGAGGGAAGGGGAAAGGCCTTTAAGATTTTCGGTTTT s mm7.chr9 55179534 946 + 123828236 ggggcggaaaggggctgggtcatgagaggagggggcggtcgggagcgcgcgcggagctcgcgggcgcgcgccggggcgggggcagCCCTCTCCCAGGCGGCGGTGGGGGCGGCGTCGCTGTTGCCCTTTTAAGCCGCGG--------GGCCACCGCCTCCTGCGGGTGGAGTCGGTTACAAAGGCAGCAGCCGGCCCGGCTCCcgcacgctcgctcgctccctcgctcgcacgcccgcccgcCGAGGCCTCG-CGCTCCTCGCCATTTTCCAGCCGCGCTCGGACGCGGGTCGCGGCGGCGGGGAGAGGCGGAGCCGCGAGAgcgcggcccgggccggccccgcggggcggtcgcggccgtgacggcggctcccggccccggcTCCCTTTCCTCACCCCTCCCGCTGGAGATGAGGGGAAGATGTCCGTGTCAGGGCTCAAGGCCGAGCTGAAGTTCCTGGCGTCCATCTTCGACAAGAACCACGAGCGATTCCGCATCGTCAGCTGGAAGCTGGACGAGCTGCACTGCCAGTTCCTGGTgccgccgccgccaccaccgccgggcagctcgctttcgccgccgccgccgcTCACACTTCACTGCAACATCACGGTGAGGCGCCGGGTCGTAGCCCCTCGGGGCCGGGCGGGGGCGGACCTG-GGCG-CCGCAGTCCCGGGACAAA-GGGCGCCTGCCCGGGAGA-CCCCCGGTGTCCCGGGCACGGCCGGTTGGCGGCTGGGCCCTG-----GGCCCGGCCGGGAGCTCGGGCTGCCTGGTCGGGAGGAGGTGGA-GGCGCGTC------GCAGCACGGCGC-GGGCCGGCTT-TGCTCTGTTGGCCCCTCGCGGCCC--CCGTCGGGCCCCGAGGTCG-------------------------------CCATGGCCGCCC----GCAGCCGGCCTGCT-CTGGGGACCGCGGCTCGTCCGTG-------GGCTCCTG-------------TCAGTCGCTCAGGTGGAAAGGCTCTCAAG--TATCTGTTTT a score=4030 s hg17.chr15_random 649654 204 + 784346 AGCTTAAATGCCTCGTTCTTCAGTCAGGTTT-----TCCTTGTTCCCGCATGTTCAGCCAA-------TCGTGTTT--------AAGGAGAAACTAACAATGAAAACGGACTCGTTGATGGAGGAAAAGTTGGAATGCAGCCTCTGGTGCTG--TTTGAGCGATCCCTCTACCCCGGGT--------CGCTGCTGTGTTCTGGAAAGGCGCATTGTACCCTGGATGCAGCAGGT s mm7.chr9 55180480 227 + 123828236 AGCT------ACTCGTTTTCCCATCGGGTTCCAAAACCCACGTCCTTGCTTGTTCAACCAGTTCTCGTTTGTGTTTTGGTCTCCGAGGACAAACGAACACTGAAAGCCTACGTATTTAAGGA-AAAAGTTTAGGACGCAACCCCGGGGGATGGTGTGGAACCATCGTTTAGCCCTGACCTGGCTTTGCGCTTACGTGTTTTGGAAAAGCTCATGGAACCTTCCACGCGGCAGGT a score=9883 s hg17.chr15_random 649861 525 + 784346 AGTCCTGTCCAGGTGCTCTGCCCGCTTTTCCTTTCAGGCTTCTGTATCAGCTGTTTTTCCCCTGTAGAATGTGCCCCTGACAGCCACC----CCCTAACCCTACCCAATTTGTCTTTACGTGTCTGACCATCAAGGCTCTTCTGGGTCATATTTAATTCATGCTGATATTTCCCCTTCCTCCCCTCTTTAGTCCT----ATTTTTGCTTTGGTTATGTTATGCTAT-----------ATTCTG-TAAGGCTTTAAAAAAATTTTTATGGTGGCAGGGGAGAATGTTTTATAATTAT-GCTTTGTGCTTTTTATCTTCCACTCAATAAATGCTTGGTAAATATTTGTTTTATTGAATGTATGACC-CTATTCTAGCTATATTGTGCTTGAACAAAAACCTTAACTGCCTAGTAAGTTAACTGCTAAGAATTTGTCAGAAGTGCAGACATAACATCAAGAACTTGTCATGGATAGTGCAAAAACGTCACTTAAGGGCTTGGTGGAAGCCTGTAAATTGACTTCC-TATGAAAGAGAGTGTAAGAAGTGAA s mm7.chr9 55183284 490 + 123828236 AGTCCT--CTGAGGACACTGCTCACTTT-CTTCCTAACCTTCTATATCAGCTGTTCTTCCTCAGTGGGACGAGCTCCTGCCTCTCGCCTCTGCCCTGTCCCAGCCTGCCTTTTCTATGGTTGATTGCCTTTTAAGACT-TTCTGTGTCACGCGCAGTTCATAATAACATTTCCCCTTTTTCC---TTTTAGTTCTTGTGATTTCTGCTTT--TTTTTTTCTTCCATGTTTACTCATAATTCTGATTATCTTTTCTCCAAGTTGTAATAGTGGC-----AGaatattatataattataaatttGTGCCTTATATTTTCT------------TTCAGTTCATACTTGTTCTATTGACTATATGGCCACTGTTGTAGTTATAT-----TTGAAGGGAAGTTTT-CCTGCCTTGAAAGATAGCTGGTAAGAATTTCTCAGA----CAG-----------------TATCATGGGCAGT---AAAGAGATACTTAAAAGGTCATTGTAGATTTGATAG--GACATCTGTAGGAAGACCAGTGTCAGAATTAAA a score=6302 s hg17.chr15_random 650386 260 + 784346 AATGTAAAGCATGACTGGAGAGCCAGAGTGATGAAGCCAGGGTCCCTTTCTCCAGATCCTTTGTAACAGTGTTATGTGATCTCTTCTAGAAGATCGTTCTGAAAGATAATGCCAACTCGGAACCTAGGAAACCATCCAGTGGGTTTCTGCAGCTTAGGTGTTTCAAATCCTCATCAGCACGTTTGTTTTCTCTGCCTCAGTTTG-CTTACAATGATGTTCTCAGTAGCTACAA-TTGCTGTCT---TTGAATACGTAAGCATTTT s mm7.chr9 55186463 253 + 123828236 ACTATAAAACATTACAGGAGAGAAACA-CAACAAGGCTTG---CCCCTACCCCAAGGCTTTTGTAATAGTGGTCTCTAATAGCTTCTA-AAGATAATTATGAAAAACAATGGCTAATCAGAGCTACAGAAATCATCCAG-GGGAATTTGCAGCCTAGTTGATTCAGATCAATTTCA------TTATTTTATCTGCCTTAGTTCATTTTAGAAAAATATTCTGAGTATATGTAATTTGTTCTCTACCTTAGCTAGTTAAGCAACTT a score=7084 s hg17.chr15_random 652009 234 + 784346 TTTGAACATGTTGTAGAGTTTGTGCCGAAGGTTAAATTTCC--TGGGGTGATGGA---TAttttgtaatatggaaaacaaaaccttcttattttaagaaatttagaaaacttttaggcaaaactagaaaatattacctatgtaattctaccactcagaaggtgccactgtcagaaattt-------gtatctttccagtcatctgctcacctcttttctcctgtgcttgtgtatgtttcctctccc s mm7.chr9 55186716 219 + 123828236 TTCGAATATGATGCAGAGTTTGTGTTGAAAGTTT--TTTCCAGTAGTGTGGTGGAATGTATTTTGTAATATTGAAAACAAAACATT---GTTGCGAAAAATTTAGAAACCAGAGAAGCAAAACAAAACAACACAACCTCTCTAATTATACTACTCA----------CTGCTATAAATTTTGGATTAGTATCTTTCTAGTCAT-----------TATTCCCCTCTGTTT-TATGCGGTTCCCCCCCT a score=5374 s hg17.chr15_random 652243 333 + 784346 ttaaaaatca-----gatatttgtttgtaatctgctttttcactcaacagtattgtagatccatgttataacttactcctctacattgccttcagttattgtgtgct-ttctgttggatgactttaccatgtagtcagtcatgttttctggtactgaataCATACGGgtatgtgtgtgtgtgcgtgcgcgtgtgtgtgcgtATTTTTTTGTAACTTAACTAATGCTTTAGACATCAGTAGGTAGAC--------------GTAAAT--CCTTGAAACCTTCCACGTGGTGACTTTCAGTTCTCATTGCTGAATTTGTTTCCAGAGATGGAAGAAATTATATTG-----TATGGGAACTTt s mm7.chr9 55187083 310 + 123828236 TGAAAAATGATAAATGGGATTGTTTTGTCATATTCTTCT-CACTTAACAGTGTTGTGACTCTGTATCTT--------------------------TCGTTGTTTGCTCTTCTATGATACGATAAATCCATCTAGCGAGTTCTGTCTCCTAATATTGGC--CATGCAGGTGGCTGT---------------------TGCATCTGTTTTCCTATTTTAAGTAGCACTCTGAGCATCAGTAGATGGAATCCTAGTGCACATAGGAAATGCCCGTGAAGTTTTCCTATAGGTTGCTTTTAATTCTTGTTGCAGATTTGGTTTCTGAAGGTAGAACAAATTATATTGTACTATATAGAAACTTT a score=3766 s hg17.chr15_random 652901 304 + 784346 CAGCTTTTA--TTTATCAGATTGGTAAAAATGTTAGAAAGTGTGCAATGAAATGGGCATTCTTACAGTCATGGCAAAAAATATAATTATCTTTGACTTTCTAGAAAGTAGTTTGGCTTTCTAGAAACTTGTTTGAATTCTCCCTGTTTAGGCAGGATGAATTCTCACTACCCCAAGGTGGCCAACCTTGTCCCTGT----GATTCCATCTCTCCCAGAAAGAGAGGTCTAGTCTCAGGGAAAACCCAGATTTGTTTGGCTTAGCCCATCTGACAGCTAATCACTGGAAATGGGGTAGGCTGGTAGAATGC s mm7.chr9 55187398 248 + 123828236 CAGCTTCCAGTTTTATCAGATGGGTAAAAATGTTAGCAC-TGGGTACTG-AGTGAG-ATCACCACAGTAA-GACAGGAGGTATAGTTATCTATAGCCCTC------------TGACCTCA------------TGCGTTCTC---------GCAGAACG----CTGAGTACTCCACACTAGCCAGAATT-TACCTGTGACCGACCCCAACTGTCCCACAACAGGA----CAGTCAGAGAGAAGAC-----TTTG--TGGCTCCCCCCACCTGAAAGCTCATTATTGGGAATG---------GTTAGAATGt a score=4923 s hg17.chr15_random 653205 132 + 784346 TTTGGTCAGGTTTTGTGTTGAGAGAGAGGTGGAAAGATGGGAGGGAGGTAGCAAAACTTGCCTCAGTGGAACTATGTAAGTTAATATAGAATGGCAAAGGGA------------TGTTTCTTCCAAGGAAGAAATTCTAGAGAA s mm7.chr9 55187999 126 + 123828236 TTTGGTCAGGTTTTGTGTCAA-----------------GGGAGGGAGGTATCAAAACCAGCCCCAAAGGAAC-ATGTAGGTTAATGGAGAATGGAGAAAAGGAGGTGTTTTTTTTTTTTTTTCCCAGGAGGAAAGGCTAGGGGA a score=1335 s hg17.chr15_random 653387 138 + 784346 ttcctttacactcttaaaaatacattgaggtcccaaggagctttggtttatgtagggtatatctattggtatttatcactagaaat-taaatcagaaatatttaaaatattgtttaaaagctcaccacatattgttata s mm7.chr9 55188322 101 + 123828236 TGCTTCTGCACTTTTACatatatact-------------------------------taaatatatttatatgtattacaatatatactaattctatgtatttaaaatatatttttaaa-------aaacatttttata a score=25213 s hg17.chr15_random 658241 1000 + 784346 GGGCTGGCTCAAGGTTACACAGTGAGTGTGGGGGCAGAGGCGGG----------------------CCCACTGTACCTCCCTTGTTGGGTTGTCTGAGGA----CCCCTCTGGCCACCCCCCACAGGAGATG--GAGGAGGACATCTGGACAGTGAGCAGGAGGCGCTTCGGCCCATGCCGAACATCCCAGGGGACCTGGAGAGCCGGGAGGCCATGGTGAGCCTGACTTT-CCCTGCCCCTACTTTGCCACCTTCCTCTGTGGTCCCTCCGAAACCCCCTTATGTTCTTGGTTTCCCCGCCTTCTGACTTCTGTGGACTTTC--TCTGCTTCTGGGAGCCAGTGGTCAGACACCATTTCACCTGTGACCAACAGGTGCACTCTGTGAGGCCCGAAAGGAAGGGGCTATGCTCCATCTGCCTGCCCCAGTTGTTATGTGTATACCCCTACAAGA-ATACTCACCTCTTGTCTTCAGGTGGCATTTTTCAACTCCGCTGGAGCCAATGCCCAGGAGGAACAA------------------------------AGGGTGTGCTGCCAGCCCCTGGCTCACCCAGTGGCCTCGTCCCAGAAAAAGCCAGAGGTAGCGGCCCCAGCCCCAGAGAGTGGGGGTGAGTCTGTGTTTGGGGAGACCCACCGGGCCCTGCAGGGGGCCATGGAGAAGCTGCAGGTGAGTAGGTCCTGGCATCGGCCAACAAGGGGGGCGGGGGGGCAGGACAAGGCAGGTGACTCCTGACATGTGACCCCATTATTTTGGCTCCACAGCGACTTTATGGA--------AGGAGAAGGTGGACCTGAAGGAGCGGGTAGAGAAACTAGAGCTTCAATTCATCCACCTCTCAGGACAGACAGACACCATAGG-GAGTGAGAGGCTAGGGCACCGCTGGGGGGA----GCTGCCAGGCCGTCCGAGGG-GCCCCAGCATCTGAGCCATGTCCTCCTGC-------------AGGAAAGTACATC------------AGCCAGGGGGCAGTGTCAGAGACGCAGCACTGGGAGAGG----AGGACATCGTCAGGCTGGCCCAGGACCAGGAGGAGATGAAGGTAGGG s mm7.chr2 32312401 999 + 182548267 GGGCTGACCCCAGGGTATTCAGTAGG----GATACAGAGGTGGGGCTCTGAGCTCTCTTCCCCTAGCCCACTCAGTCTACCTGATGGGATTATTAGAGGAGACAACCTACTGTCTGCCCCC---AGGAGATGTGGACCAGGA-----GGAAGAAGATGAGGAGGTTCCTCAGTCGAGTCTGGCCATCCCAGAAGACCTAGACAGTAGAGAGGCCATGGTGAGCTGGGCTCTGTCTTGCCCCTTCTCTTTT--CTACCTCTGTGGTCC---------------------TCGGTTTCCT-ACCCTCTGACTTCTTTTGATTGCCACTTTGTGCCTGGAAGCCAGTGGTCAGTCTCCCTCTC------------------------------------------------TGC--------CCTGCCCCCTTTGTCCTGAGCATTTCCCTGAAAGGCACACCTCCCTCTTGTGTGCAGGTGGCATTCTTTAATGCCGCTATAGCCAGAGCAGAGGAAGAACAGGCCCGACTACGTGTGCAGCTGAAAGAGCAGAAGGCACGTTGCCGGAGTTTGTCTCACTTGGCAGCCCCAGTCCAAAGCAAGCTTGAAAAGGAGGCAGTGGTCCCCAGGAATGTGGATGACTCTGCATCTGAGGAGAGCAATCAGGCCCTACATGTAGCCATGGAGAAGCTGCAGGTGAGTTTGTCT--GTGGGGGCT------GGGAGTGTGGGGGCCAGCCAGGGCTCCTGAGTCCC----TGAGACCTC--TGTCTTGGCTCCAGAGCCGCTTCCTGGAGGTCATGCAGGAGAAAGTGGAGCTCAAGGAGAGGGTAGAGGAGCTTGAACATTGCTGCATTCAGCTTTCTGGAGAGACAGACACCATTGGTGAGGTGGAGCCCAGCCCAAGGCAGTGGGGGCTGTGCAGGGGGGTAGACTGGGGGAGCCACAGTGTCTGAGCCTTGTCCACCTGCCTGCCGTCTCCACAGGAGAGTACATTGCCCTTTACCAAAATCAGAGGGCGGTGCTGAAGGCTCGGCATTTGGAGAAGGAAGAATACATCAGCCGGCTGGCTCAGGACAAGGAGGAGATGAAGGTAGGC a score=18813 s hg17.chr15_random 659310 485 + 784346 AACACCCCTTCCTCCAGGTGAACCTGCAGGAGCTGCGGG-GCAGGTGTTGCAGCTTGTGGGAGACCACAAGGAGGGGCATGGCAAATTC-TGACCATTGCCCAGAACCCTGCTGATGAGCCCACTCTAGGAGCCCCAATAGCCCAGGAGCTTGGGTGTGCTGACGAGCAGGGTGGTGAGTAGAGCCCTCAGGCGGGGTGGGCAGGCAGGAGCAGGGGAGGC-TCACACTGTGCTCAGATTCCC-ACCCCCCCTCCCTCTCTCTGAAGATCTTTGTGAGGTGAGCCTCACTGATAGCGTGGAGGCTGCACCAGGAGAGGACAGGGAGGGTTCTCCCCACGACAACCCCACTGCACAGCAGATCCAGCAGCTGCTTCCTGTAATGCAGGACTCCCCAGGAGCACCCAGGCATGGGCAGCAACCCCTGCATGCCATTCTTTT--TGGGCTCCCAAGAACAGGGAGATAAACACCACCATCATCTGAGAGCCGGG s mm7.chr2 32313453 486 + 182548267 AGCTCCTTTTTCTCCAGGTGAAGCTGCTGGAGCTCCAGGAGCTGGTGTTGAGGCTTGTGAACGAGCGCAATGAATGGCAGGGCAAGTTCCTGGCCGTCTCTCAGAACCCTGGTGACGTGCTCACCCCAGTGCCCACAGGCTCCCAGGAATTTGGTGCTGCTGACCAGCAGGATGGTGAGTAGAGCTGTT--GTCTCTTGGGAAGGCACAA--AGGGGAGGAGTCCCATGGCGTGCAGAGCCATGACCCCCTCCCCCTTTCTCTAAAGACCTCAGGGAGGTGAGCCTGGCTGACGATATAGAGCCTGCACAAGGAGAGGCAGGGGTACCTGCTCCCCATGAGAACCCTACTGCACAGCAGATCATGCAGCTGCTGCGTGAGATCCAGAAC-CCCCGGGAGCGGCCAGGCCTGGGTAGCAACCCTTGCATCCCCTTTTTCTACCGTGCCGATGAGAACGACGAGGTGAAGATCATGGTTGTATAAAAGACTGG a score=2979 s hg17.chr15_random 659795 129 + 784346 AAGGGGAAGGCGTAGGTGTGGGCGTGG-CAAGGTTCCTGGAAAAGAGGGGCTGGAAGGGAAAGGGGAGGAAGATGGAGAGAGAAGCTAGAGCTTCATAGGTAGT--GCCTGGGGGCTGTGGCGGTCCTCCCC s mm7.chr2 32316463 129 + 182548267 CAGGGGCTGAGGCAGGTGTGGATGTGGGCAGGGTTCCCGGAAGAGATGCACAGTTGATGAATGAAAGGGAAGATGGGGTGCTGGGCCGTAACT-AGCAGGTAGTCTGAGTAGAGGCTG--GTGGCCCTCTCT a score=55373 s hg17.chr15_random 659925 1697 + 784346 CCCCACACACACTGGCCTCTCTCATGGCACCCAGGCAGTCCACCCACAGTTCAGACCAATGCTCAACTCCCCCGGCTTCCCTCTTCTGTGGTCACCCCATCTTCCAACCCACTGGCCCAGGGCCACCTCTTGCTT-GGGGAGCCCCACCCAACAGCCACCAAGCCTGACAGAAGGAACACTGCTTGAACCAAAATGGTGAAGCTGTAAGGGATGGCGGGCTGGAGTGAGCGCCAGAGGCCCCTCTCTGGGCAGTCAGAAAGCCCAGGGTCCACTGAAGGGACCCTGGGGAAGGCAGGGAGGGCAGGTAGCTAGATGCCACTGCCCATAGACTTATAAGTCTAAGAGGGGAACCTCAACTGGTTGGCGGGGGGCTGCAGGTTGCATAGGTGAGGCTGGGCCCTTCCTGCTGGG-AAAAGCAGAAGAGGGAGACTCCGTGGCAGGAAAGGCAGGTGGG----------------------CTCGCTAGGCGGAGCTCAGCTGGGC---------CAGCAAGCACTGTGGTCTCCTTGGCTGAATAGCACAGGTGACCCCTAGGAGCAACAGGCCAAGGTCCGTGAGCCTGCTGGCTGGCAGTAGTGCTTCAGTAGTGCTGGCCAGGGACCCAGCCTTCAGTCACATGCTAGCAGCTGTGATGGTACCTGGGAGGGAGGGAAGGGGGCTGTGTGTCCTTGCATGGCCTATGAA-----GTGTGTTGTGGGATAACCGTGTGTATAGGACTCTCAGGCTTTTATCCTAGATCACCACTGGATTGCTGACAGATAGAGGACGTGGGACCGTGACTATCACCCCTAATCTGCAGTGGATTTGGCTCTCGGCACTCCCAGGCTGGGAGCTGGATACC--TGCCCTGGCAGCATGACTCAGACTGCATGACAGGTACGGCGTGCCCAGGATGATGTGCCCAGGCCTCTGGCCGCCTGAGTCCAGCCCCCCACACAACCCCCTCCAAGCTCCCAGCCCCTACACCATAAACCATGAGCTCTGTGCCCTCTCTGATGGTTCCACATCTGCCACCTTCGGCATGGAGCCTGTTGTAAGAGCCCCCAGGCTCAGCCATGGAGACCTTGAGCAGTGGCACTGAGTCCTGTGGCTGGCAGGGA-GGGAAGTGAGACAGCCAGCAGCACAAGGACAGAAAGAGGAAAGAGCAAGTCTGCAGCTCTAGAAGGGAGGGGCAGGCAGCCTGGCTCTGAGGCTCCAGGTATGCCCCCTGTGTGGAGCTGGGGCAGCGGGGCGGG---------CAGACCATTCATGCAGCAGGCAGTGAGGCATGTACCTACCATGGCTGATGCTCCTCAGGGGCCACTGATAGTGATTCTGAAAGACAGCATCAAATC-ACATGGCAGGTCCC--ATGCATGGGTGGGGCAGGCCTGGG----GGTGGCAGACACACGCACATGCCAGATTGTGCACACACATGCTGTGAGGCCCCACGGCCC-GCATGCACACTCTA--ACACATGCCCACAAACAACACGCATACGTCGCCCTCTCCGCCACCTCCCGGTGCCCAACACCCTCACCAGCCGGCA---CGTGCCGCATGGATCTGGGGCGTGCAGCCACTCGGCACACTGAAGCACATGCGTGGGCAGAGTCACAACACAGATGCTCACCTGCACACAG-AGGCATTTGCACCAGCTCCCTGCACACTCGTGCCTGGCGTGCTCAGAGGACCACCCATCCTGCTCAGGGA--GACAGGGCTTGCTCACTAATGTCCGGCT s mm7.chr2 32316592 1609 + 182548267 TGCCACACACAC-GGCCTCTCACACACCACCCAGGCAATGCACC-ACAG------------------------GGCCTCCCTCATTTTTGCTCACT--GTCTCTCATCTCACTGGCTCAGGGCCACCCCAAGCCTCAGGGAGTCCCATGTAACAGCCATGAGGCC----AGAAG------TGCTTGAACCAGGAGATTGAAGCTAAAGGGGATGGC----TGGAGGGAGCGCTGGAGGCCCCTC---AGGTGGTCAGAAAGTCAGGAGTCCTCTGAGGGGACCCTGGGGA-GGCTGGGAGG-CAGGCAGCC-GATGCCTGCGGCCACAGACTTATAAGTCTAAGAGGGGAGCCTCCGTTGGT---CGGGGGGCTGCAGGTCTCGTAGGTGAGGCTGGGCCCTTCCTGCTGGGGAAAAGCAGAAGGGTGAGCGTCAATGGCTGGGGAAG-AGTTGGGACAGGGTAACCGAGATCTGTGGCCAGCCAGGCAGAACTCAAGTTGACTTTCCCAGTCAGTAGACAATGCATTGCCTTCGGCTAAAAGGCACAGGTCACTCTGAA----AACAGGTCAAATGTTG-GAGCTGATGGGCTGGCTCTA---TGTCGG--GGGCTGACGAGG----TGGCTGTTAGCTACAGGTGTGCAA-------------TGTCAAGGATGAATGAGA--------TCCTCACCTTGCCTGCGAGCCCTCAGGCGCTGGCAGAAAGGCA-------AAGGCTCTTAAG---TTGTCTAAAGTCACCA----------GTCAGAGCCTGGCTTTGCCAGCGCGATTCTCATGCTTGCCCTGTGGTGAATTTAG-TCGCCATGCTCCTAGGCTGGAAGGAGAAAGCTCTTATCTTGGCAGCATAGTTCAGAGT-------AGGTATG--------AAGAGGGGGTCCTAACGCTTCTGGCCCCTT-----CAGAGGCTGAAGACACCCTCTCCTAGTTCTTAGTCCCTACACTGTCAACAGTGG--TCTGGTGTCTCCAGGGAGCACCCACATCTACCGTCTTGGACATGAAACCTGTTCCAAGAGCCCTCAGTTTAAGCAA-GAAGGCCTTGAGTAGTGGCGCTGAGTCCCGAGGCTCACTGGAAAGGGAAGTGAGAGAGCCAGCTGGAAGAGGACAGGAAGAGGGA-------GTCCAGAGCTGCAGGAGAAGGAGGAGGG--GCCTGGCTCAGGGGTCCCAGGT--GTCCTCAGCATGGAGCTGGTGCAGCGAGGAGGGAGGGGTAGACACACTGTTCATGCAGCAGGCTGAGAG-CATA-ACCTACCGTAGCTGACACTCCTCAGGGGTCACTGATAGTGATTCTGAAAGACAGCACGAAATCAACAGGGCAGTTCACAAACACACAGGTGGGCCAGGCTGGGGGTTAGGGGACACACACACGCACACGCCTGGGCGTGCACACACATGCTGTGAGGCCTTAAGGCCCTGCGTGCACACGTTAACACACATGCCCACA---AACACGCATATATCTCCCTC----CCACCTCCCAGTGCCCAGCACCATTGCCGGCCAATACGTCGTGCAGCACGGATCTGGGACATGCAGCCACTCAGCACACAGAAGCACACGCATGAGC--TGTCACAACACAGAAGCTCGCCTGCACAGAGAAGGCCTTTGCACCAGCTCCCTGCACATCCAGGCCTGGTGTGCTGACAGGGTTA-CCATAGGGCTCCGTAAAGGACAGGGCTTGCACTTTAGGATCCAGCt a score=69177 s hg17.chr15_random 662231 2080 + 784346 gtgaagcagcatctctggactcccagtccagtgatcttgcccaatactttgcTGCTTGCCTATACCCCTCTAACTTGGTCAACAGCACATCACAGGGCAAGCCCCAATCCCTGCTTCATTTTTATATATGGGCGCTGGTCCCACAGCCCCACTCTCCAGCCATTTGGAAACAAAAACAGATGCTATTG-----------------TTCTTCCTTAGAGAACG----TGGCCAGTGGAGACGGCACA-------CTGGAAATCAGAGTGAATGTTCTTGAAAGAGGGTCACGGGTCAACAAGGCCCAGCCAAAGGATGCAGTAGAACCATTTTCCTTAGAAATCTTTGGGAGTGAAGTAGGCTTCAGCCACTCCCATCCCTGCCCTCGCAGCTACCACTACCCCATTAGTTTAGACAGGGTCGGGCGGGGAGGGGTGTGGAGAAGAAATGAGCTTGCCTGTGGCCCCCAGGCTCCCTCTGTCCTAGCTCAGGTCTGGGTGCCATTCT-----TTACACTCGTGTGCTCGCTCACGCACACATCA-CACACCTTGCT-GGTCACACAGTCACAGACTCGCCTCTGCTCCTGTGGTCCAGTGGCCGGACA-CCCCCTGGGATGGCTCAAAGGAGTCAGGACTTGG--AAGTGGGGACATCAGGGTAGCT--GAAGGAAATCCACACACCCAGAGCATCTCGGAGTTCAGACTCTCAGACCTGAAGTAGGCGCCCCCGGGACTGGGCTAGGAGTTGGACGGAATGGAGGATGGAGGACAGCGAGAAGAAAGGAA--GAGAAATGCAAAGTGTGGGCAGCCGCCAAGAG-----TGAAAATAGAGGGAAGTGTCATGCAAGTGCTGGACAGAAGGCGGCAGGTGGGACGAGCCCCACAGCCCCCTCCTCAAAAACGACCACCTCCAGGACTCAGTGATCCCTGGGGGGCAGGCTCTGCCAGCCCTCGGCCACACGTGGCTCCGGCACCCAT---GGTCCCAGTGCCTTGGATGGAGACGGCCAGTTCTGGCGGCCAGATGTGGTGCTCTGGAATCCAGTCCCATTTCCTTCCTGGCCACGCCTGTCCAGCGGCCTCTTCAGCCGCATTCAGCCCCTACTTACCTGGGGACCCC-----------GGCTGGGGCACGAGAGTACCAGGGGGGTAGGGCCCAAAGGGATCAGGGGAAGCCTCTGGCCTGGAGGGTATGGGGCACGCTTCCCCAAGGGCGGACCCGGCAGGAGGAAGCCCAGGAGCTGGGTCCTGCCGCCCAGGAGCTGGGCCCTGCCACCCAGGCCGGGCTAGGGACATGGCAGGGCCTGGGCAT-----CCTGACGCTGGACTTGGGCGACCTG--GGAGGCACAGGGAGGGGA-----------GAGATGGGCGACCCCGCCCCAGCGCAGTGCCGGCCACACCCCAAGGCGGTTGCCAG------AGCTTAAGCCCCGCCCCCAGCAGC----------GAGAACATCCCAGCTCCACA-------CCCCCCCCCCGCAGCCAGTGCTCCTTGT---------------------------------CAAGCTCCCCCCGTCACTCCAGGTGGGAGCCACCCCGGTGAGGGGGTGTGCCACT---TGCCCCCAGGGCACTCCTCTGG-GCATCCCGGGT-GGGGGATTTTGGGGCCGTGGGGGGCAGTCTTTGGTACCTGTGTTCGTCAGGGATGCTCTG-----ACAACCAGGTGTCGTCCACGGGCGGGGGCATGGGCATGGTGACAGTGGTCCTGTTGATGTCACCGATGATGCTGAGCGCCTCCTTCAGCGCGTGGTGCATGTGCAGCATCTCGTCGTGCTGCTGTGCCTGCTCTGCCAACTCCTCCATCAGTGTGTTCTGGTTCCCACATGAGTACATATTGGCCAGCGGCTCCGAGATGATGAACTCCGGGGTCTGAGAGTGGGCAAACAGGGAAGAAGGTTGGGACCTGGTGCCTGTGCCGCCCTGGCTGCCTTGCTGG---GCCCTTCTGGGACTGTGCGCTGGACTTGGAGCCCCTTGGAGTATGGCTTTTCACACGG--GCTTCTA--TACCGCTTCGACTGGAAGATC---------CACCTCcccactgccttttctcactcagatggggacaccgaggtccagaggaaaagacacctgtcaaatgtcacaGATCTGGGAGGGGACTTAAGACTTATCATGCCAAGAGGACACCTGTCTACTC s mm7.chr2 32318409 2108 + 182548267 GTGAACCAGCATTTCTGGACTCCCAGTCCTGT----------------------CTTAACTGTTCC----------AGACATTAGAGTCCCACAGAGTAAGCCC--ATCCCTGCCTCGTTTA-GTGTATGGGGGCTAGGCCCCTAGCTCTGTCCTTCAGTCATCTAGATTCCCAGATAGATGCTTTTGGTCTATCAGATCATGTGTTCTTTCTCAGAGACCAGCCACAGTCAGCAGAAACAGGGCAGACTGAGTTGGTTACTAGAGTGAGCTTCCTGGAAGGCCAGTCATGGATAAAGAAGGCAAAGCCAAGGGATGAAGTATATTCCTTTTTCCTGGAGATCTCTAGCAGCAGGGTAGTCTTTGATC---CTTGTCCCTACCCAC-CATCTGGTTTCAGACCACCAGACTGTTCACCATT------------------------------CCTAGATCCCATCCCCAGCTGCTTTCTATCCTAGTCCGCACCTGGGTGCCGATCTCACATTCACACCCGTGTGCACGCCCACATACACATCATCACACCTTGCTTGGTCACACAGTCACAGCCTGGCCT--GACACTGTGGGCCAGAGGCTGAACAGCATTCTGGGACAGCTCAAAAGAGTCAGAGCTGGGGAAAGTGGGG-CATCAAGGTAGCTCTGAATGTAACTGA-------AGAAAACCACACGGTTCAGAAACCTAGACCTGAGTTAGGCTCACCAGGAGCTGGGCCGGG---TCAGTGAAGAGTGGAATGGAGGAGGATGGAAGGCAAGGGTTTAAGAAATGCAAAGTGTGGG-AGCCACAGAGAGAAAATGAAAAAAAGAGGGAAGCGCCATGCAAGTGCTGAAAAGAAGGGGGCAAGTGGTTTGAGCCCCAGAGCCCCCTTCCCAGAAACGACCACCTCCGGGACTCAGCGCCCCCTGCGGGGCAGGACC-GCCTGCCCGTGGCCGCAGGTCCCTTGGCCTTGCATTACGACCCCAACGCCTAAGATGGAGAGGGTCGCTTCTGCTGCTAGGCCGAGGATCT-----ATCCGACTCTACCTCCCTCCGGGTTACGCCCGCCTGGCGGCCTTTCCCGGGGCTTTAAGCCCCTACTCACCTGGGGACCCCAGGCGGGGCGCGGTTGGGGCGCGAGGGCACCTGGGGAGGGGGGCC-AAAGGGGTCAGGGGAAGCCCCCGGCCTGGAGGGCACGGGGGGCGCCCCCCCCAGGGCGGATCCAGCAGGCGGAGGCCCAGGAGCAGGG---------------------CCCCGCGATCCGGGCCGGGCTGGGGGCACGGCGGGGGCTCGGCGCTGCGGCGTGGGGCTGGACGTGGGCGATCTACCGGCGACAAGAGCAGAAGAAGCGCGGAGCAGAGATGAGCGGCTCCGCCCCAACAGAGACCCCGCCCTCAGCCCAGGCTGTCCCCGCCCATGCAGC--AAGCCCCGCCCACAGCGGCCTTAGCGTGGGAGCCTAAGCCGGATCCCCAGCGGCGCCACCCACCCTGCAGCCAGCGCTCTTGGCAAGCCCCGCCCCGCAATAAGCCCCGCCCTCTTCTAAGCTCCTCCCCTCGCTCCAGGTGGGAGCC--CCCGAGACCCCGGCGCGCCACTGCCTGGTCCC--GGCCCTCCTCCCGCGGGCCCCGGGTTGGGGGGCTTTGGGGCCGTGGGGGCCGGCCCT-GGTACCTGCGTCCGGCCGGTACGCTCTGCACCTGCAGCCAGGAGTCGTCCACGGGCGGGGGCATGGGCGTGCTGACGGTGGTCGTGTTGATGTCGCCGATAATACTGAGCGCCTCCTTCAGTGCGTGGTACATGCGCAGCATCTCGTCGCGCCGCTGAGCCTGCTCGGCCGATTCTTCCATCAGTGTGTTCTGGTCCCCGCAAGAGTACAGGTTGGCCAGCAGCTCAGAGAAGATAAACTCCTTGGTCTGTGCACAGAGAAGGAAGGAAGGAAGCTAGAACCCGAAGACCCTGCCACCTTG------TCGCAGGCCAGACCTGCTGGATCTGGGTACAGAACTGGGAGC----TGGGGTTTGGTATTTCAGATGGCTACTTCTGCTTGATGCCTAAATTCGCAGGTCTCTTCAAATCCCATCTTAATGTCCTTTTCTCAGACAAGAATACACAGCGGGAT-----AGGGAAGTCACCTGCCCTAGGCTTCAGATCCGGGAGGAAACTCAGAATATAGCCTGTCACTAGGACAACTGCCTACCC a score=58870 s hg17.chr15_random 664594 3256 + 784346 GTTGATGCCTGGATACAGGA--GCTCTGTGGGTGGGAGTGAGACAAAACACAGGGTCCTGAGCTCTGGGGACCAAGCAATGTCCTCTGGTGAAAAAAATCCTGGACTTG---CTGGCAGAAGAtttgcctcttactcgccatgtgctctgaataca-tttacctgccctc-tgggagcttcagttttcttatctgaaaaatgaggacacctgaccccttccctgcccagttcagtgttgtgggACAGGGTTGCTGTC----AAGACAATACCCAGTCCTGCCCT-CCTCCCTGAGTGGGCCAGGTAGCC-----CATGTAGCCTCTTCCCAGCTTTCCTGGGTGGCACTGCCAG--------CCTGGTGCCCATTCAATCTAGTCCTTCATCTTGCTGGAGCATGGGGAAGCTCTGAGTAACATGGGACTATAGAGTGCAAGAGGGTTGCTGATGGTCTGGGTCCTGTGCCCTCCTCATTCCTGGGCATTCTTGACAAAGGCTCCCAGCAACTGAGGGTACGCAGCAGCTGTAGACACCAGCCTGATGAATATCTCATTGTGGGAAGGGC----------ACCATAGCAGGAGTGGAGCTCCAGGGAAATACAGAACCGAGGTCTGGGAGGTGCT-GATGTGAGAGGCCCAAGAAACCT-------------------CGGCTTTGC----------ACTTGCTGAGTACCATCTGC--------------------------------------ACCTCTCAGGAGGGAGAGCGC---------CAGGCTCAGGAGGTCCTTGCCGAAGCAAGGGAGCTT---------GAAAAGGGGGCTGG-GGTGGGCTCTGCCATTTTCAAGGGCTGACAGGGATCCCCTCTGGAGGTACTTGGGGCAGTGCTGC-GTGCCGTGGCTCCTGAGTGACAGAGTCAGCTCTGCGCCCCACAAGACCGCTCCCTGCCGAGAACTCACTGTGATCATGTGCTGGGTCCAGATGCTCACGCAGCCTCCTGATGGGAGCATCAGGTGTGCTGCCTGCCC-AGGGCGGCCCACAAGAGTctgccc----tgccctg--ccctgctctgcTATGGAACAACTCCCATTCTGCCTTTGGGGAGAGGTG----TTCATTTAAACCATGAGTGGGCTGGCCCCCATGGCACAGTTACCACAGAG----AGTCTGCCACTACCCATGGCTGAGAGCTCTAGTTCTTCTCTGAAGCCA---------CCAGGA---CAGAT--GAACAGTGGCTTCC----CCCTTTTGGCCGACTCA-GCTGCCTTTCATCAGCTCATCTGCTCCTAGGATCCACTCTTCCTCTGGCTGGCACCTGATCTGAGCCCGAGGCTCACACCTCTGCCCACAGGCCCCAGCAGCTGCTTCACCTCCGACTCCATCCCCCACCAAGCACTGCCCCTCACCAGCTGCTGGGGTGCCACTAGTGCCCCTACATGGTTCTCCCTCTCCAGACCCTTGGGTCCAGCTCTAGCTTCCTTCGGGAAGCCACACCCCAAGACCCCAGCCCTGCTCTGGGGCCCTGTATCCCCGACTTCCTGCATTCTTCTCCCTCCTTCTGGGAACATGAACTTGCCCTGCCAGCCTGATGACTCCTAGAGGGCAGGACACCAGGTCCTGGACCATGGCAGGCCTGGGAGTGTCTGCTGCCGGTGATGCTGGAGCTGGTGCCCATGTCCACATGATGTCCATGGCACAGTGGCCACCTGAGGCTGGGC--GCATCTGAGTGGTGGCTGCAGAGTGGGGCCCTTACCTCTGCCTGAGTGAAGTTCACCAGGTCCTCCCCTGTGCTGTCATGCTGGGCGTGGAAGAGCCGGCCTAGCTGGAGGCCCCGCACCACATGGTAGAGCAGGAGCTGGGGGTCGGTGCCTG--------CTGGCTCTGAGGCTCTGGCTGCTGAGTGGCTGGACGGACTCTGCCAGAGGCAAAAGGGGCCATCAGCCTTTGTGATCCAGGCCGAGGCCTGTGGCTGCAGAGAGGCAGTGTGACCCTGGCATGCCACCCTCAGCTCTGCCCCAGCCCCCCGCACCCAGGAACGCCCACAATCAGCACACCCACCTGGGCAG----TCAGTGTCCGGCTGCCCTCCAGCGAGTGAAGCACTTGCTTCTGGGCCGTCACTCAGAAGCTAAGTGTCTGGAGGAAGTATGTTCACCGTCAGAGAGGCCAAAGTGGATGCCTCCGTCCAGGGCCCCTGGGGACAAGG------GTGTTGGGTCCAGCTGGCCTGAACTGGCTCCC-CACCTCAGGGTGCCCCC------GTGGGCAGCAGAAACCTGGGGCTCGGCCCTCAGCACCCACCTCTGTGTGAGAACAGCACGAGCCCACCATCCAGCTGGGTCTGCATGAAGCTGCGCACCTCAGTGCCCGGCACCGCCCACTGCACTACCCACCCATTGCTGGGCTGCTTAATGGTGTACACCAGGTCCTTGGGCCCAGAGTAACCATCCATGCTCCTCAGAGCCTCTGTAGGGATGGGCACGGTGGCCCCCTCCCACATCTGGGGACACAGGCCTGTGAAGGTTCTGCCC------TGCCACACTTACCCACCCCTTCCTCCCCGGCCCTGGGCTGCCACCAGGGCTCCAACCCCACTGAGGCTCAGGCCCTCAGGTGGCATCAAGGCTGGCGCTGCTGCGGCTCCCCTGCACAAATGGCCTCCCTGC--ATTCACCTTCCCTGTCACCCCAGGGAAGGCCACCCTCCAGGCCCAGCATCCCTGCTCTTCATCTGTCCTAGTCCTGTGTGTCCCTCAAGACCAGCTTGTGTAC-CCAACCCAGGAAGGCCCTAGCTCTTACCGTCACCAAGTTCTCACCCCCAGAAACCCCCAGCGCTGACCAACAGTGCTCCTTAATCTAGCTCACTGGTGGGGCAGCAGTCTCCTTTCAGACCCTCCATG---TGTGCC---TGGCAGGGGCTGGGCACAGG-TGGGAACAGTGAT------------------TTTAGAAACGAGCACTCCTTCCAGCTAAGGGAGGGGTGGGAGGCG-----CAGAGAGCTGAAGCCTGATGGTTGGCACTGTCCTGCAGCACAGAAGCAGTGCTGGGATGGGCCCAGGTGCTTCCAGAGCAGTTACGGGCCCTCCTCGTGTTGGGCAAAGGGGGCCCCTTTTCAGGCCTCCCACTAGCAAGCAGAACAGGCACCCGTTCCTGAGGTCCTGGTACCACTCTTGCTGGGTCAATTACTTGTGGGCAGTGCTGCAGTGGGACTCACATGCCCAGAAAACAGCCCTCTGGCATTCCTGGGCTTCCTCCCCTGGCCGCAGGGAGCCCTCAGGCCGAGCCTTGGCAAGAGGGGCCATACTGTGGGAGGCAGGGCCCCATCACTGGGCTCCCAGAA-CAAACACGGGTAGATGGCACCACCTGGTGGCCGCACTGCCACACAGCCATCCCAGCCT s mm7.chr9 66906022 2989 - 123828236 GTTGGTGCTCCTGTACGAGAAGGCCCTA---GCGAGCAAAAGGCAAAACTCGGGCC----AGGTGCGGGGAC-----AGTATCCTTAGGTGAAGGGAACTCAAGGCTTAATCCTGGT------CTTGCTTCTTACGAGCCATG-ATACTGAATAAAAGTCACCAGACTGCATATGCACTTC------TTTATCTACAAACTGAGGTTACCTGAGCCCTTCTA-GCCCAGT---GTCTTGAAGGGCAGTGGTACTGTCTGTCAATCCACTGCCTACTGCTGCCTGACCTCTGCCAGGGGAGGAGGGTGTCTGTGCCACGTAGCCTCTTTCCAGCCTTCTTGGGTGGCACTGCCAGTCTGGCCCCCTGGTGGCCACAGCCTTGTGTCCTTCGTGTTACTGGAGCATGGGGGGGGGGTGTGTG----TGTGCTGCTGGGTGGGGGAGGGGCACCGTGGCTTTG--TCCCAGCCTCTCCTCCTTCCAGGACTCTGATAACAA-GGCTCCCAGTGACTCAGGACATACAGCTGCCCTAGCCACTGGC-------AGATTTCATTGTGGGGAGGGGTCAGAAAGGGGCTATGGTAGATGCTAGGGCCTGGGAGAAGTGAGAACAGAAGCCAAAGAAGCAAAAGAAGTGCAGGGTCTGAGGAATCTTACTTGACCCTCTTTAAGGCAGCTTCCTCCTCTGAGCTACCTGCTGGGTGGGAGCTGCTCCCCCACACCCCGCACCTCCCCCCTCTGTGTTCCAGTACTTCTCAGGAGG---AGCGCACACCCTGATGGGGTAGAAAGGAACTTGTGGGGCCCAGGAGGCCTCTGAGTGCTGGAAAGGGACCCGGAGGTGGGTCCTGCCCTTTTCAAGGGTCAGGGTAAGCCCTGTTGGAAAGTTCTTGGAGCAGCACCATAGTGCTGCAGATCC--AGTGGCAGGGCCAGCCATGTTCTCTTGGATCCTGCTC---ATGTAGAAAGAATAGGGGTCATG--CTG--------TGACCACGTGGCCTCTAGGTGGGAGCACCAAGCATGCTGTTTGCTCTACCGTAGCCCAGAGGAG-CTGCTCACAGTGCCTTAGACCCTG------TGGGGACCAATCC-----------GTGAAGAGTGATGACTGCTGGCTCACACTA-------GTTAGCACCGACAGCCCTGGCATCTCAGCCGCTCAGTCAGCCTCAACATGCGGCTGGAAATTATAATTTTGATCGGTGGTCCTGGTGTGCCCTAGGGACTCTGCTCCGAAGAGTAGATCTCAGTGTCCCTCAGACTGGCCCACTCTGCCTGGGA----CTCATCTGCATCCAG----CTTGCTTACATTCTCTGGCATCTTTCCTGAGTCCCAAGCTCA-ACTTTATCCCAAACTGTCCAGC-------------------------CTAAGTGAGCTCATGCCCTCACCAGCCGCTGGGGTGCCTCTGGCCCTCCTTCCTGGG---CCCTTGTCAGCCTCTGGGATCCAGCTGTGGCTTCCTTCTGGAGGCCTAACCCTGAG----------------------------------------------------------CTGGGA---------------------------------------CAGGAT------------------------CCAGAGAAGCTAGCTGCCAGTGAGGTGGATGCTCCAGC--------------------TGGCA-----GCCACCTGAGGTAAGGTTGGGGTCTGTGTGGTGGCTGAGGAGTGAGGCCCTTACCTCAGCCTGGGTGAAGTTCACCAAGACCTCCTCTGCACTTCCTTGCTGGGCATGGAGGAGTCGGCCAAGCTGGGGGCCTCTTACCACCCGGTAGAGCAGGTGACGAGGGTCAGCGCCTGTGCTGGAACTGGCGCTCAGGCTCTGGCTGCTGAGCGGCTGCACAGACTCTGTGAAGCATGGAGGAGCCTGTTAGCTTTTG--------ACAGGAGCC--------CAGACAAG------GGTCCTGGGCTACCATCCTCCATTCTGCCTCGGCT------AGCCAGCAT------------GCAGACCTACCTGGACAGACGGTCAACTTCCGGGTGCCCTCCAAGGAGAGGAGTGCCTGCTTCTGGGCCACCACTCGGAAG--AAATGTCCAGGAGAAGTGTGTGCGCCGTCAGAGAGGTCGAAGTGGAAGCCTCCTTCCAGGGCTCCTGAGCACAGGGTGGGTGGAGCTGGGTCCTGTTGGCCCAAGGTAGCTCCCTCCCCTCAAGGTACCCCCACCCCAGGAGGCTGGAGAACCCT-----------CTCAGCACCCACCTCTGTGTGAGAACAGCACAAGCCCACTGTCCAGCTGGGCCTGTGTGAAGCGGTGGACCTCGGTGTCTGGTGCCACCCTCAAGGCGATCCGTCCGTTGCTGGGCTGCTCGATGGTGTAGACCAAGTCTTCTGGGCCCGAATCATTGTCTGTTCCCCTGAGGGCCTCAGGAGGGATGGGCACAATGGCCCCCTCCCAGATCTAGGGACACAGACC-GTGAAAGTCCTGTCCACATTGTGTC---CTTTCCATCCCTTTCCTCCTGGCCCTTGGACTTTCACCAGGCCCCCAACCT-------GCTCTG---CCCGGCTGTCATGGACACCTGTGCCATTCTGA----------------GCCTTCTTTCTCATTCTCCTTTTCTGTCACGCAGG-------------------------TTCCT--TCTCCACCAGCCCTGATCTTAATTGTACCTCAAAGCCAGACCACAACCTCCTGCCTAGAAATGTTCCTGTTT------------GGTCCTTACTTC-AGAGATCCCTGTCCCTGACCAAAGGTGCTGCCGGGTCT----CCCTGGTGGGGGGGCCTTCCCTTTCCT--CCTGCCATGGCATATACCATCTGGCGCGGG-TGGGCACAGGACAGAGGCAATGGTGTTGGCCAGCGCAGAACACTTAGAAATAGGCTCTCCTGCCAGTTGAAGCTCGGGAGGGAGGCGGAGAGCGGAGAGCTGATTCCTGAT-----------TCCTA---------------GCTGA---------------------ATCGGCTAGGAATCCACC-CGTGCAGTGCAGGGGAGGCCCCAT---AGGCTACCCACC--CACGCAGGGCAAGGTCTTCTTCCAGAG-CCCTGTTCCATGTGGCACAGGGCCAGTCACT-GAGGCCATTCTGGGTACGAGGCCCTCAT-CTCAGAAAACGTCCTTCTAAAACCCAGGAGCTGCTTCTCCCT-----------CCCAGAGTCCGAGAGTAAGTTAAAA-------------------------CCAGTGTTGGACTCCAGGGGGCTAACATGGGTGGATATTGCCACCTAGTGGCCAATTTACCACACATCATTTCCAACTT a score=503 s hg17.chr15_random 667956 36 + 784346 AGACAGCCCAAGTCAGCCCTCTTGCGGAACCTTCAG s mm7.chr9 66909011 29 - 123828236 AGGCATCCC---TTAGTTATCTAG----ACCCTCAG a score=19248 s hg17.chr15_random 668119 757 + 784346 cccatctctgggcctcaacttccacctttgccaaatgggggCCCTGCTCTGCTGTGGACAAGGGGCAGGAGTTTGGGAAGCCAAGCTGAGGCCTCCACTTGCTGGGGTGAAGGTGGGAAGCTTAACGGTCCCACCCTGACGCCAGCCCTTAAGGGCTTGTAAGTGATTCTTTCAGGTGTTCTGGTCCTAAGCCACAGGAGAAG----------GAACAG-------CAGAGCCACCCATGGCTGCTCAGAAGTCTGCCTACCGTACTTGCAAATGTCCAATAACAAAACCTCCCACCTGTGTTCTATTT-CAgcacaatctcacatctctccttccaacaactgcgtgaggcacacagtagtgtcctcattttgcagaggaggaaactgaggctcagagggggggagATCTGTGCCGGGAAGTAGGGGACATTGGCCTCTTTCTCAAAGCAGACATGGGGGGTGGTCCCAGGAATATGCTCACCTGCAGGCCTGAGTTTGTA-TGAGGTC-GGGGGTTGGCCATTGACAGGCAGGATGGTGACAGTGAAGGCCACAGGATGGCTCTGGCGGTCCATCTCAGAGGCATTAGCCATCAGGACAAAA----CCGTCAGTGTCTTGCTCCCATCGTGCAGGTACTGGATCAGATGCTCTTCCACCTAGGGGCAGGCCCAGGGCTGGCAGTCAGGCCCCAGC-------------------------------AGTACCCTTCATGTTCtgcctttgggtgcaggaagagactgacccttttagggcctcagcttccattggtggaaaatggggacc s mm7.chr9 66909040 688 - 123828236 CCTATATATAGG----------------------------------------------------------------GAAGCTTCGTTGTGATCTTTATTTGCTGTG------------ACCCTCGAGCTCCCAACCTGCAGCCCACAATACAGGACTTATAATACATTTCTTTAGGTATTTTGGGCCTGAGACATGAGGGAAAACCTTTCTGTGAACAGGTGGGTCCAAGGACAGGCAAGGTCA-----AGGATGGTCTTTCTAAACCAAGACTGCCCAGTAACAAAACCTCACAACTGCGTTTTGTTTTCAGCACTGTAtcacatctctccttccaa------------gtttgtggtagtgaacccatttcacagaggatgacactgag--ccagagag----------------------aagggactCTAGTCTCTTTCTGGGACCAGAGATGGGA--TAGGTTCAGGAGTGAACTCACTTGCAGGCCTGTGTTTGTGGTGAGAACAGGGGGTTGGTCATTAACAGGAAGGATGGTGATCGTGAAGGCCACGGGCTGGCTCTGGCGGTCCATCTCTGAGGCATTAGCTAGCAGAACAAAGGCGTCTGTCTGTGTCTCACTTCCATCATGCACGTAGCGGATCAGCTGCTCTTCCACCTATGAGGAGACCCAGGATTGGTTGTCAGGCTTCAGCTAGCCCAAGACTCAACAGGGATCTTGGGACCAGCACCCTTAACGTCCCATTGTTAGGTACAGGA---GACAGATCCCTTTAGAACAC--ATTTCCACAGGTAAGAAGTGTGTATG a score=32142 s hg17.chr15_random 669359 587 + 784346 CCGTACCTCTCTCCAGCAGAAGGTGCTGAGGGTCCTGGCTTGAGGCCCATCCTCCTTCTGCAGGGCCCCATGCCGGGGTGGCTCCAGCACCTGCAGGCCAAGGCCCGGGAGAGTGGGGAAGTAGGACCTGGCAACGCGGAGCAGTGGAGGGGCCAGGGTGCAGCTGCGACTGTGCCCCCTCTACTGCTGAAGTTTTGTGCCCCCAGTGGGGATGACAGCAGGCAGCACCTCCAGCTCCAC-GTGACGTCCTCAAGGGGAGCACCCAGGCC-GAGGCCACATCCAGCGAGAAGGCATGGCTCCGGGCCTCAGGGCGGGAGTGCAGGTAGAGGATCCTGCCTGTGTCCACTGCCTCTTGGGAGAAGCTCTGCACGGGGTCCAGGCTGGGTGGCTCATCTGCCAAGATGCCACGCAGCACCATCACCAGGTAGCCGGCACTCGGTGGGCTCTTCACTGAGAAAACGATGTCTGCTGGCGGCACTGCCTCCTGGGCTACCTGGTTAACAGAGGTCATGAGGACTCACAAGGGAATGCAGAGGGGTCTCAGAGGGGCCCACTGTGGCCCTAAGCAGCCAGAACAGCCTTGATCT s mm7.chr9 66910024 565 - 123828236 CGGTACCTCTCTCCAGGAGAAGGTGCTGAGGCTCCCATCTTGAGAATGATCCTCCTTCTGCAGGGCCCCGTGCTGCGGTGGCTCTAGCACCTGCAGGACAAGGCCTGGCAGCGTGGGGAAGTAAGGCCCAGTGATCTGGACCAGAGGAGGGGCCAGCGTCCGGGTGC-----CGCCCTCGGGAACGCTGAAGTTTTGAACATCCAG-GGGGATGACTGTGGGCAGCACCTCCAGCTCCACAGAGATGCCTTCAAGAGGATCACCCAGGCCCGAGGCCACATCCAGGGAGAAGGAATCACTCCAGGCTCCAGGGCGAGAGTGCAGGTAGAGAACCCGGCCTGAATTCACTGCCTCCTGGGAGAAGCTCTGCACAGGGTCCAGGCTGGGCGGCTCCTCTGCTGAAGCGCCGTGGGACACCATCACCAGGTAGCCGGCGTTCGGGGGGCTTCTCAACGAGAACATGATGTCGGCAGGCAGCACTGCCTCCTGGACCACCTAGTCAACAGAGACGATGGGGACAAAC-------------GGGGTCACAGG-----CTGTTGTGGACCTCAGGTGGCAGAACAGGCTCGGTCG a score=229176 s hg17.chr15_random 670764 4678 + 784346 ctgcctcctcccatgaggcc--ttcctgatgccagatcTGCTGGCTCACCATGGGC---CCCAAGCTCCAGATGC---AGACCAGAAGGGTCTCCGAAATAAGCAGTGTGGAAGAGTAAGGCTGAGAGCGGGCAAGGACTGGCCTGAGGTCACAGGGCATGTCAGATCTCTGGAAGGCCCGTGGCTGCTCTGTGGGGTTCCTGGGTGAGCAGAAGCCCTTGACAGACCCTCCTGGTCCTGGTCTGGGCTCTGAGAAGAGAGCGGGGTACACAGGGGTCTGAGAGGCAGCGGCCTGTCTCCACGGCCAGCAATCCCAAAAGTTCAGGACCCGTGATGCCCTCccagggaac-tgactgcaatgcagattctcgggctccacttcagagattctgtagggctgggtggcgtccaggaatctgCATGCTCAGCCATGCCATGGACATGAGTGGACACCAGCTCTAGAGGCACACACCACTCCCAGGAGGATGGGTGTACAGCAAGCTCCCCAGAAACTCTTGGGAACACAACATATATGGGAGCACATCTGAGGCACGTGCACACACACAAG-CTGGGACCACCACAGGTACAGCCCAAGTCACATGTGTTCCCGGCATGGAGGCTGGGAGGAAGGCCCTCTACCTGGTCCACACCCCGCTCACCACCTCCAGCTCCTCACCTCCAGCTGGTCCCTTCTGATCTCAGCTGCCTCTCCCTGGAAGATGTAGATCTCCTTGTGCTAGGCCAGCTTCAGTGGGGCTACTGGGCCCTCTAGGGCAATGGTCACTTGTAGGGTGGCATCTGTGTGCACTGGTCCCACATCCATTGAGAAGGCCAGGGTGTTGCGGGAGCTGAGGCTGCCATTGTGGCCATAGAAAACAGCCCCAACCAGCAGGTCCTGCTGAGAGAAGGCTGTGGCTGGCTGAGTGGCTTGGAGCAACTGTCCCCAGTGAGGGCTGTCTGTGACGTGGTAGTGGGCCTCATCCCTACTGCAGATGTTGAGGTTGGTGCCCAGGTGGAGCTCGGCCATGTTGATGGTACCCTGGCCTCCTTGAGGAACCATGAGGCCGGAGCCATTGGCCACACAGAGGTAAGGCTCCAAGGCCTGCACCTCCAGCACCGTGATGGCCTGGTGCTGCCCATCGGACACCTGCAGCGGGATCCAGCCGTGGTCAGCCT--GAGTGTGTGAACAGGACTCGCCTCTTCCTGAGGCCCCTCCTGGATGAAGCGGCAGATGGGCTGCATGGGCTCATCCGTGGCCATGATACTGCCAGAGAGGAGGTCCTGGTGGGTCAGCACCAGCTGGGCCTCAGCAAAGCCCGAATCAGCATTGCTGAAGGCCATGTTGTCTGTAGTCAGCAGCCGCCACCTACCCCAGGCCACGTGGAAGACGCAGCTGATGGTCTGCATAGGGGCGTGGTCATTCACAGGCTGGATGGCCACTCAGAAGACACCCCATACCTCCTCCCAGGCCACGTCACCACTGCTCTGGTCCTGATG-GCAGCAGGAAATGGGATATCATCTTCTGTGATCTCGGAGTCATCATGCTGCTAGACCAGCTGGCCATGCATCAGGTCTCCATTGGTGAAGGATGTCACCATAGTGATCTTGTCCTGTGTCCCACGCCAAGTCAACCTCCCATGGCGGGGCTGCTCCATGACCTCATAGAGGTACCTGGCACTGTTGAGACTCTTGATGAAGAGCTGGTCAGCAGAGAGGACACACCCACCACCCTCGGGCACCACGAG---------------GACAGGCATGTCTGGGTCACCGCCAATATGGATGGAGAAGGTACAGAGTGGGGAGAAATATGGTGGAGCTGTGACATGGAAACAGAAGGTGTCCTCCACTGCCACTGAGGCACGTGCCATGGCCCCATAGGTCACCTCTGCAGCCTGTACGTCATCCTGGGTGAAGCCCTGACCGTCTGACAGCATCGTGCCCTGTAGTTGAAAGTTGCCTTTCCTGGGAGCCTGAACCACCTCACAGTGGAAGGTTGGGGGGCTTGGGCCTGCCTC------------CTCCAGGGTGGCCTCCAGGTGGGCTGTGGTGAGGGCCTCCTGCTGGGTGTTCTGAGTGTGCAGTGGCTCCAGCTGCAGCATCCACACAGTGGCTCTCTGGATGGTCACTAGGAAGGACAGATTGCTCAGGATTTCCCAGCTCACCTGCACCTGCAGATCCAGGTTCTCCACGGTGTCCTCGGTGTAGTGCTGTGGGTCAGTGCTCAGGTACCTCACGTGGCCCTGCTCCACATCCTGCTGGTGGAACGCCTGTGTGACCCACCACTCAGCATCCTCCACCCCACCAGCCCCCTGCTTCTGCAGCTCCCTGAACGGCAGGCCTCCGGTGACACGGAACAGCACGGTCACATCCTGCCCCACGGCGCTGGTCTCCACCAACAGGTTGGTAGGCAAGATGGGCATGGCAGAGCCCTGGGCCAGATGCAGCCCTGTGCTGCGGTGGATTTGTATGGCCAGCTGGACAGCCACCACCTTCAGCATGGCCGGGGGGCTGGCCTGCAGTCCATTGCTGACCCGGAATGTCAAGTCCTGTGTAGGGCCACCACAGTGGACATAGACTAGGCTGCCGGCCTCCAACTCCCAGCAGGAGAACTCAGTCACCGGCTCCCCAGGCTGGTCTCGGTGCTCCACAGGGAGGCCAGAGGGGGTGCCAAGGAGCTGGAAGGCGAGGCCCTCACAGGCAGAGTCCAGGTCATAGGCCTGGAGAACCTCAGGCCCCAGAGGCTTCTGTGTGTGTTCCAGGATCACCATAAGGCTGCCATGTGGGAAGATGATGTGGGGTGGGTCATTGACAGGGTTGACCTGGATGGGCAGGAGGTCTGTTTGGCCCCTCCGCAGGCATGAGGGCATGGGCAACCAAGCCATCACTGACACCTCCAGCACCAGCTGGTCAGAGGTGTCCTCAGGGCCATCGTGGATGAAGCGGGCCTTGCAGTTCACCACGTCCAGGAGGGTGAACATTTTTCATGCCTGGGCACCCAGGACATCCAGCTCGAGCTCGCTGTAGTGTGCCCCTCAGGTCACGCTGAACAGCACCTGGGATTTACGCAGTTCAGCCTCCATCAGTGCCAGCATGGGCTGCACATGCCACCACTCAAGCCAGGCTGTGCCACCCTCGGTCACCACCACTGCGCTGAT----AGCAGCTGGATGAAATTGGCAAAGACAGGAGGTAGCCCTGGCTCAGGCACGCATGGCTCAGCTAGCTCCACGGACAGCCAAGCCTTGGGAGCCAGGGTGGAGAAAGCTTCATAATGGCCATAGGCATTGTCT---------ACCTCCTCCAGTCTGCAGCCAGCCACCATGTTGTGCGTCAGCAAGGCTTCCCACAGCCCCTGCCTCTAGCCATTGACACTGAGGTCTTCCATGCAGCCAGCCCAGCAGGGAGGCATTGGCAGCCCCTGGTGTCAGGCCTGAGCGGTGTTCCTGGAGGTGATGAGAGGCCTCTGCAACCAGCTCCCCAAGAAGGAGACTGTCACGTGGCTCCAGGTAGCTGAGGACTCCTCAGTT-------CGTGTGGGGTACTGGTCCATGGAGATTTCTAGCTGGTGAATGTTGATGTGGATGCTGACCTTGTGGGGCTGTGCGTCAGTCACAGGCACACTGTTGAGGAGCAATACAGTACCCTGGCCCTTCTCAACCATGGACCACAGGTGGCCCTCAAATATGTCCACATGGATGAAGTCCCCATGCCAGCCTGCTGCCTGGAAGGCCAAGGGTGCCTGCCAGCTCTGTGTGGTGAGTGTAAACTCCAGGGTTCCTTCACCCTGAGTGCCCCAGGCAGGCAAGGCAGCCAGAGAGTGGGACCCAGAGAAGCCCAGGGCCACATCATCATTGGCAGAAAACTCTTCAGCACAGCCCTCATGCTTATTGGGGGTCAGAGGCTGGAGGAGTCTGCGGCCATTGAGAGCGGCTGCATGGAGGCAACCCCTCAGGGGATGGCTGGTTCCCCTCAGGTACGGCAGGCCAAGTCTCCCAGTGCTCCCAACAAAGAGCCCATAGGGGACTTCTAGGGGG---GCTCCCAGGACTACAGAGGAGGCATTCAGAAACCCATTGACTGACAATGTGGGCCAGTCCTCTGAGACAGTCAGAACTGTGGTGTGGGGGACGGAGCCACTCAGTAGAATTTCTGCTGGGGTCTGCAGCCTCAGCTCCTCCTGGCCCAGGACAAGCCTGACCTGAGGAGAGACGGGGAATGGGAGATGGGGGGCAGCACTTTGAATCCATCATTTCCCTTATAAAAGCACAGTGGGTTCCCCACAGGGGGCCCCAGAGCAGAAAACCTAGGACAAGGGCCTCTGGTGCCACTCCTCTTGCCTTCCTGCCATCTCtttattcatcctccaaacactcaccaaaggaaactctgggccaggcctggatgggctctggggaccctggtgtgaatcagatgtggtccttgcccacaaggaactgacaTATAGCAAGATGCTCTTCTAGAAACCCAACCTGTATTTTTAAATTCTCCTCCTCTTTCCTTGAGTGAAAAGCACCAGAAATATTGTCTTGGAATCTAG--ATTTCACCCCT-GGAATAATGGGTAACTGAGAATCCGTTGATCAGTCCCCCTAAGTTTGGCAAAGTTTCTCGAGGTCACTGAAGGAAGCCAGGCTAACTGTTCAGGGACAGGGAGCCCAGGCAGATGCTCTGTGTTCTGGGAAAAAA s mm7.chr9 66911235 4495 - 123828236 cTGCCTCCTCTGGTGTGGACACTTCCTGACA----------TGTTTAGTCATGGTCTTTCTCAAAGTCCAAACACTCAGAACTGGAAGGGCCTCAAAACTGGGCCTT----CACAGTAAGGCAGTGAGCCAGCT-------------GGTCA----GCAT-------------------------TGCGCTGTGAGCTCCCTGAGTTAACAGACACCATC-ACAGGCCCTCACAGTTCTGTTGTGGAGTCTAGGGAAAGAGCTAAGGACCTGTGGATCTGAGGGGCAGCG---------------------CTCCTAAAGGTCACCCCTCATGGTAACCTCATAGGGACTGTGACAG-GATATACACTCTTGGTCTCTGCTTCAGAGATTCTGTGGATCTGGCTGGAACCCAG-ATTTTACACGGCTATCCATAGCAAGGACACATGTATATGTGATCTCTGGAGGTGCGTGACACTT---AACAGGTAGGTGTATG------TTCCTAGACACATGCAGAACTACAACACATACAGGTG-ACTACTGAAGC-TGTA-ATACTCCTAAGACCTGCATCCCCACAGGAAC----------------GCCCCCCTCATGGAAGT----------ACCCTCAGCTTGG--CAGGCCTCGTGCACTGCCTT---------ACCTCTAGCTGGTCCCTTCTGATCTCAGCCGCTTCCCCCTGGAAGACGTAGATCTTTTTGTGCTGCACCAGTTGCAGTGGGGCCAGGGGACCCTCGAGGGCAATGGTCACTTGTAGGAAGGTGTTAGTGTGTACTGGCCCTGCTGCCACAGAAAACGCCAGGGTGTCTTGGGGGCTGAGGCTGCCATTGTGGCTGTAGAGGATGGCCCCATCGAGCAAGTCCCGTTGGGAGAAGGAGGTGACTGACTGGCCATCCCGGAGCAGCTGCCCCCACTGAGGACCAGCGGTTACATGGTAGTGGACCTCATTTCCACTTCGTATGTCCAGGTTGGTGTCCAGCTGGAGCACAGCAGTGTCAATGGTGCCCTGGCCTCCTTGAGGAACCACGAGACTAGAACTATTGGCTACGTGAAGATAGGGTTCTGAGGCTTGGACCTCCAGCATGGCAGTAGCCTGGTGCTGCCCATCAGACACCTGCAGCTGGAGCCAGCCGTGGTCGGCCCCCGAGTGCACAAACAGGACTTGCTTCTTCCTGAGATCC-TCTTGGGTGAACCGGTAGATGGGCCTCGTGGGCTCCTCCATAGCCACAATGCTGCCAAAGAGGAGGTCCTTGCGGGTCAGCACCAGTTGCGCATCACTGAACCCTGAATCAGCATCGCTGAAGGCTACATCATCTGTAGTCAGCAGTCGCTGTCCACCCCGGGCCACGTGGAAGACACGGCTAATGGTCTGCACAGGGGCGTGGTCATTCACAGGCTGGATGGCCACTCGGAAGACACCACGCACCTCCTCCCAGGCCATGTCACCACTGCCCTCTCCCTGGCGTGTGGCCACAAACGGGATATCATCCTCTATGGTCTCAGAGTCATCGTGCTGGTAGACCAGTCGGCCATGAAGTAGGTCCTCATTAGTGAAGGATGTCACTGGGGTGGACTTCCCCTTTGGGTCCCTCCAAGCCAACTTGCCATGGTGAGGCTGCTCCATCACCTCATAGAGATAGCTGGCGCTGTTGAGACTCTTGACGAAGAGGTGGTCGGCAGACAGCACGCCCTCCCCTCCCTCGGGGACCATGAGAAGGACGTTAGTGAGGACGGGAGCATTTGGGTCACCACCAATGTGGATGGGGAATGTGTAGAGCGGGGAGAAATGGGGTGGGGATGTGACCCGGAAACGGAAGGAGTCATCGGCTGCCTCAGAGGTCCGCATTGTGGCCCTGTAGGTCACCCGACCGGCCTGCAGGTCACTCTGGCTGAAGCTCTCGCCGTCTGACAGCCTTGTACCCTGAAGCAGGAGGTTGCCTCTTCTGGGGGCCTGAACCAACTCATAGTGGAAGGTATGAGGTTGTGGGCTTCCCTCTTCCTCCTCTTCCTCCAGGGATGCCTCTAGGTGGGCTGGGGTGAGGGTCTCCTGATGAGGGTTCTGTGTATGCAGAGGTTCAAGCCTCAGCATCCATACTGTGGCCCTCTGGATGGTCACTGGGAAAGACAGATTGCTCAGTGTCTCCTGGCCCACCTGCACCTCTAAGATCAGGTCCTCCACTGTGTCTTGGGTGTGGTGCTGTGGGTCAGTGCTCAGGTACCTCACTCGGCCTTGCTCCACATCGCGCTGGTGGAAGGCCAGTGTGTCCCACCACTCGGTGCCCTCGACCCCTCCGGCCCCCTGCTTCTGCAGCTCCCCGAATTGCAAGGTACCAGTGACTCGGAACAGCACGCTCACATCCTGTCCCACCGCGTTCGTTTCTACTGACAGGTTGGCAGGCAAGATGGCTGCGGCAGAGCCCTGGGCCAGGTGCAGCCCTGTGTTGTGGAGGATCTGTATGGCTGGCCGGACGGCCACTACCTTCAGTGTCGCTGGAGCACTGGCCTGCATCCCATCACTGACCCGGAATGTTAGGTCCTGTGCAGGCCCACCACGGTGGACATAGACTATGTCGCCCACCTCCAGTTCCCGACAGGAAAACTCAGTTGCTGGCTCTCCTGGCTGGTCTCGGTGTTCCACAGGGACACCAGAGGAGACGCCAAGGAGCTGGAAGGTGAGACCCTCACAGGCAGAGTCCGGGTCGTAGGCCTGGAAAATCTCCGGTCCCAGAGGCTTCTGTGTGTGTTCCAGGATCACCATGAGGCTGCCGTGGGGGAAGATGATGCGAGGTGGATCGTTGACAGGATTGACCTGGATGGGCAGGATGTAAATTTGGCCCCTCCGCAGGCAGGAGGGCACAGGTGCCCGAGCAGTCACAGACACCTCCAGCATCAGCTGGTCAGAGGTGTCTTCAGAGCCATCGTGAACAAAGCGGGCCTTACGGTTCACCACGTCCAACAGGGTAAACATTTTCCGGGTTTGGGCTCCCAGGATGTCTAGCTCCAGGTCACCATGTCGTGCACTCTGGCTCACGCTGAACAGCACCTGGGACTTGCGCAGCTCTGCCTCTGTCAGGTCCAGGGTGGGCTGCACGTGCCGCCACTCAAGCCAGGCCGTGCCACCCTCGGCCACCACCAGGGGGCTGATGGTAAGCAGCTGGGTGAAGTTTGCAAAGACAGCAGGCAGTCCCGGCTCAGGAATACATGGCTCTGGCAGTTCCATGGCTGGCCAAGCTTCTGGTGCCAGGGTGGAGAAAGTTTCATATGGGCCATAGACCTCTTCTTCATATTCATCCTCCTCAGGCCTGCATCCTGCTGACATGTCACGGGTCAGCCAGGCATCCCGGAGGCCCTGCCTCCTGCCATTAACACTGAAATCTTCTATGCAGCCTAC----CAGGGAGATATTGGCAGCCCCCGGTGCCAGGCCCAGACGGTGCTCTTGGAGGTGGCGAGAGGCTTCTGTGTCCAGACCCCCAAGGAGGAGACTGCCACGTGGCTCCAGGTAGCTGAGGACCCCACGGTTGAAAGTACGCGTAGGGTATTGGTCTACAGAGATTTCCAGCCGGTGAACATCTATGTGTACGCTGACCTCGTGGGGCTGCCCATCAGCCACAGGCACGCTGTTGCGGAGTAGCATGGTACCTTGGCCTTTCTCAACCACAGCCCGCAAGTGGCCCTCAAATATGTCCACGTAGATAAAGTTGCCACGCTTGTCCCCTGCTTGGAAGGCCAGGGGTGCTTGCTGACTCCGAGTGGTGAGCGTAAACTCCAGGGTGCCTTCCTCCCGAGTGCTCCAGGCAGGGAAGGCAGCCAGTGAGTGGGGCCCAGAGAAGCCCAGGCCCACTTCATCACCAGCAGAGAATTCTTCAGCACAACCTTCATGAACATCGGAGGTCAGCGGACGGAGGAGGTTGCGGCCATTGAGAATGGCTGAGTGGAGGCAGCCCCTTAGGGGTCGGCTGATTCCCTTCAGGTAAGGCAGGTCAAGGCTTCCAGAGGAGCCCACGAAGAGCCCGTAGGTGGCCTTGAGGTGGGATGCTCTTGGGATGGGAGCAGAGGTGTTCAACACTCCGTCAACAGACAGCACAGCCCAGCTGTCGGAGACAGTGAGCACTACAGTGTGGGGGGCAGAGTCACTCAGCACGGTGTCTGCTGGCGTCTGCAGCTTTAGCTCCTTCTGTCCCAGGGCAAGTCTGACCTGAAGAGAGACAGAGAGGTCAGGGGTGGGAGTGGC----TGACACTTCTGTCTACCC--------CACACTGAGCCCCCTTCAGAA---CCCGGA---------CTGGGACA-------------------CCCTTAGCTCCCTATTGT----------------------TTCAACTGGGGAGAGTCAAGG------------------------CCCCAGTGTCGCTCAGAGACTGTCCCTGACC-CTGGGGATTTACACAAAGCAAGGTTCTCCCCTGAAGCAATACTTTGCCTGGTCTCCTTCTTCCTCTCTTCTCTCCAGTGAGCAGTGCCAGAAAACCTACTGTGGGCTCTAGAAAAACTACCTCTGGGAGTAATGTGCACTCTGGGATCCCCCAATGAA-CCCCCTTAGTACGCAAAAGT--------------------AGCTTGGCTCACTGT----AGGCTAAGAACCCAGAGAGATGGTCTGTGTTCTCCTTTTGAA a score=2770 s hg17.chr15_random 675585 224 + 784346 GGAACTGCAGAGGCAGAACACTAAGAACCATGATCTT-GGAGTCCTGGTATGGTGCATCTCTGTAGGGATGTGGCATCACTACCTGCAGAGCTCAACAGCCATCAGCACCAGACTGCACCACATAGGTGTTCAACAGTGACACCTTGTGGCAATGAGCAGCAATGACAGCAGCAGACTGACCAAGCCCTAGTCCTCT--TCCCACTGGGGTGTGGAAAGAGATGGCT s mm7.chr9 66916064 191 - 123828236 AGAACTGGAGTGGGTGGTGGCCAAGTACAA-GATCTTAGGAACCGAAGCATGGAGCATCTATG---------GACTCTACTGTATCTGCTGCTC---------CAGGCCCAG----------------GCTCAA-AGTGACGACTTGTGGCATCTAGAAGCCATGGCAGCTGTAGGATGATAGGGCCAGGGTCTCTCAGTCACAATGGGGCATGAAAGCAGATGGGT a score=49755 s hg17.chr15_random 675976 2758 + 784346 TTTGGACTAAGACCCTGGGTTCTTAAACTCTTCCTGGTATGGGGTAAGACTCAAGTAGGAGCCACAAGACTCCTTGATAATAAAGCTTGTGGTGTCTTGAAGGATGAAATGGAA--AAATGAAGCTG-----AGGCAGTACTGGTGCTGTTACTCTCATGGACAG-ACAGTGGTGCTGCAGATAAATTGGTGCAGTGCCACCAGGATGCGCAGGGGTCATGGGGGCCCAGGAG---------GGGGTCTCGCCGAggaggaggg--gatgcccacactgaaacttcaaggagagactagagttcggcaggtacagggaatgggtgggtcacacacctggcaggagg--------agtgtgatgacca--aaggcctggcagcaagtgaccataagatggccaggaactgaaagcagttcagtgcagtcagagcacaaagggccagtgagggcttgtggtgggaaacatggttggaaggagccggtgggcagagccagttcatgaagGATTTACCATTTCTGAGCTGCTGCTGcccatcccacagtggagaacttgagaccccaag--aaaagtgacttacacaaggtca-acagccagctggGGTTCACTCAAAGCTAGACAAGGAATCTC--GCCCCAATCCCAGGGGGACGTCACTCACCTGCAGGTGTCCAGAGTAGAGCTGCAGCAGGAGGTGGTCAGCTGGGCCTGCTGCCAGGAGAAGGAGGGCTTCGGGTTGGGACATGGAGAACTGCAGCTGCAGGTCTATGTCAGTCAGAGCCATGGCCACAGTCACCTCCGGGTGGTTCTAACCAAAGAAGGAAGCTGTGTGAGAGAGGGAGCTGTGGTCAAGGCTCAGATTCTTGCCTGGAGGAGGCGAGGTGCTGCAGGGAGGGATGGGTGGGTTGCAGAAAGGGG-------TCCGTGCTGGTGCACCCTCATGGTTCTGCCATACGGTGCTGCCTCTGAGCACTGCCCAGATCCCAGCATTTCCTTGGTCCTGGCACCAGAAGGCACAGCCTCACCTTGTGTCCAGCCCAGACCTTGACTTGGCAGGAGGTCAGACCCAGAAATTCCCAGCAACTCAGGTCTCCTCCTTGGAGGTTCCTGGAGCCAGAGGCCTCTGCCAGCTCTGACTCACCTCCCCTGGGCCCCAGAGGAGTCTCCCTCCCAGGTCTGGCTCCCCGACCTGGCCCAAAGGGAAACATCACTGGCCTGATCACCTGGCTTGGTGGTCACAGCCCTGAGGAATGGAGTTTCTGGAGAATCACCACCAGGCCAGATCGATCCCTGCTCAGATTCCTTCTCCTAAGTGCCCTTGTGCTTGGGCTCCTGTGCAGCACCTGCCGTG-CCATGCCCCACCTCCATGGGTTGGCTGGGGCCACGGCTGGGATCTGGGGGTGATGTCAGTGCAGCCCACCTATCCCTGCTTCTCCCTCAGGCCATTCTTCCAGCTGCCATTGAGGGTGGGGGCAGG------AGCTTATTGGCCTGAGTTTGCCAAGGAGTAAAGGCTCTCAGGCCAGATGGGGACCATATGCAGTGTCAAAC-CAAAGTGGGCCCACACTTCCTCCACTACCCTGCTGTTGCTTCCTGCTAGAGAGCTATTCACAGTCCCCGCTGAGCAGTCAGATCCGGCCCCATTGTTTCC-ACCGTGGCCAAGGAACCAGGGATGAGAACAGCTCAGCTCCCAACCTCT---CCAGGCCACCACTCAGTCTGAGGCTGAAGACAGGGCCTAGAAGGGGCTGAGGGTCTGCTGAGCAGGCCAAAGAGGGCCTCCCCAGGCAGAAGGCCATGTCTGGGCTTGCCTGGGATTAGTGGTTCTTATGCAGGGCCTGTTCTGTCCCACACTGGGACTCCTCCTCTTTTGAGTTGCTGCTTCCTCCAGGCAGTTTCCCCAAATTAGCCTCCCTGACTTCCAACCCGAT--GCCATAATTTCTGGTCTATGCCTTTTGCGGTGATAAGAGCCAAATATAACTTTAACTTTGCCTGCAGATGTCCAGGGCTGGGGGGCAGACAAACACAGGTTAAAAACTGTGATTCATCCCTGTTGGGTTTCCCTCAAACCCCA-AGAACAAGCACAGGCTGATGGCCTTGAT-GGGGTGATTCAGCACCGACCTCACATGCACTGGTCCCTAGCCAGCCTGAGCCAGCTGCCATCTGCTCGAGGAAGTAGCTTCAGCCATTGGAGGAGTTGGAGGTTTGTATACCCTCAGGGCAGCCAGTCCCACCTGGAGGGATATCCAGGAAAGATCCCGTAAGAGCCCCTCGGGTTGAGTT-AAATCCCCTCTAGTTATCCCCTCCTCCTGCCAGCACTGCTGGCAACACCAGCACCTTGGCTGGGAAGCTAAGGGAATCAAGCAAGCCCCGCAGACCATCTGCACGGGGGTGGCCCAGCAGTCTCAGCAGGCACAGCACAGCTTGGTGCCAGCAAGAGACAGACCAGGGAACT-----GCAGGTGGCGGCCAGCTACT--GGGGTGCCTTATCTGCAAAGACATTGATTCCTAAGAGCAAAACACAGCACACTAAAGTGAGGGAGGCCATAGCACAAGGGGTGGGGGCACATGG-CCCTGCAGGATGGAGCCACCACAGTCACCGgctggaacggctcacagcagctgccaggagccaactgttgaattttcaggaattttgagaggcaggtgatactgcccacagtgggaatatttataccaggaaaagaggcaaatactgaaaatcagggttccctctccccaacaaagccctttgcgaaacatttacctacccagcacCCACGGGGAAGGGGGCACATCTCCCT s mm7.chr9 66916255 2329 - 123828236 CTAAGCCTAAGATCCTGGATTCCTAAACATTTTATGATTAGGGGGAAGACTCAAGAGACAGCTAAATGACCCCTTG-----------------GTCTTAAAGCATGCAATAAGAGCAAAAGAGGGTGGTGGTAGATGATAAAGGCATTGTTACTATCTCAGATTGTACCACCTTATTACAGAGGA----------------CGGGGGGAGGGGGAGTCCTAG----TCAGGTGAGTAGAACAGGGATACTACCTGGGAGCAGGGATACTCCTCACACATAGATGTCAAGGAGAG---GGGACTGGTCAGGCATGGGGAAGAGAAAGA----AAGGCAGGCAAAAGAGAAAAGCCAGGGTAGTAGTGAGGAAAGCCTGTTAGTCAGATACTACGAGGAGGT---GGACAGAGAA-AGCTCAGTCCAG-----------ATGGTCAACTAGGGGCGACGAAGAGAAGTGAGACCCGAGACAGCTCGTAGGCAGAGCCACTGCACCAGGAGCTCAC----TCTGGGAAGTTGCTAGCCA-CCCATGGCAGACAAACCAAGACCCAAGGGCAGAGGTGACTTGCATGAGGTTGCACAGCCAAAGGCGAGGCCTCCCAACCTGCAGAAGGGATCTCTAGCCCTGTTCCC--GGGTGTGCCACTCACCTGGAGGCATCCTGAGTGGAGCTGGAGCAAGAGATGGTCATCTTGGCCTGCTGCCAAGAGGAGCAGGGCTTCGGGCTGGGATGTGGAGAACTGGAGCAGCAGGTCTACTCTGGTCAGAGCTGAGGGCACGGGCACCTCCAGGTGGTTCTCCCCGAAGAAGGAGGCTG-GTGAGAGAGGGAGCTGTGGTCAAGG-TCAGGCTCCGGCCAGGAGGAGGTTAGGGACCGTAGAGACAGACAGATGGGCTACAGGGGAGGGAAGGGCTTCTATGTTGACATGCCC-CATGGCTCT------------------------------------------------------------ATGTGGCACAGCCT--------------------------------AGGGGCTCG----TTAAGATTCCCA-CTATTCAAGTTTGCTT-----GGGTTCCTGAAGCCACAGGTTCCCGCCA--------------CCTTTGGGCCCCAGC-GAATGTCCATCCTGGATCTGGTCTCTC--CCTATC----------------TTGTCATGATCATCTGGTGGGGGGGACTC----------------------------TCACAATGA----AGGCTGATCCCTGACCACAGT-CTTCTCCTAGG-----------GTGGGCTCCT----------TGCCACGACCGCACTTTATCTCTGT-GTTTTGCTG----------TGGAGCCTGATGGTGGTGGTA-TGCAGGCAGGTCATTTCTTCT-----------CTATTTTCTTAG-TGCCTGTAGGGACGGGGTGGGGTGGGGCCGTTTATTGCTCAGAGCCTGCCAAGGAGCAAAGGCTCCCAGGCC-GATGGGAAGCACGTGCGGTGTCAGACTCAAAGCCGGCCAAACTGTGCTCCACCACTCCGCAATTGCTTCCTGCCTCAGCACCACCACGGGTCCCTGGTGAGTACTCACATCCGGCCTCTCTGTTTCCAAACATGCCTAAGGAGCCAGGGAAGACAGCAGCAGAGATCCCCTTCCCTAACCCAAGCCAGGGAT--GTCT----CCAAATACAAGGCTGGGGACGCACTACAGGCCTGC-------------GAGGGTCTCCTCAGGCATCAGGACAGATACGGTC-TACCCAGGGTTGGTGAGCACTGTGCAGG--CCACTTTGGACCACAGTGGGA------------------ACCTCCTCCTTCAGGCAGTTCCCTAATATTAGCTTTCTTCAGTCTCCAGCAGTTTCTCCACCATTTCTGACCCAT---TCTTGTGGTGGTTAGAACC----------TCGAC--TGCATGCAGATATCCAGTGTTGGGG----AAAGATGGCAGG--AGAAAAGGAGACTCATCCCAGTCAGGCCTCTTTGAAATTGCAGAGGACAGT--CAGGCTGATGGCTCTGACAAAGATGTTCTGGCATCAGTCACACTAGTGCTGGGCCCCGGCCAGCCCAAGCCAGCTGACAT------GACAGAGCAGCATCAGCCACTGCAGGGGTC---------TGCACCTTT-------TCTGTCCCA---GGAGAGATGGCCAAGAAAGATAATGC---TGTTCTCAGGGCTGAGCTGAAATCCTCCCTAGTGA-------CTCCTG------------------------------------AGTTAAAAGGATGTCATGAGCAC--AAAGCCACTTGCCCAGGG-------------CTCTGTGGGCCCAGCACATCTT-GTGTCGTGGAACCTCAGACCGGGACACTGCTCAGCAAGCAGTAG-GAGCTTGTAGGGGGTGCCGTGTCTGC-------TT---------GAGCAAAATGCAGGAGGCCAAACCACGGGCAGCCACGGAACAGAGGGT-GGGGCACACGACCCCCACAGGATGGAGCCACCACCCTGGTGGGCTGGAGTGGCTTGGAGCAGCTGGCAAGAGCCGAA-----------CAGGGATTTTGTGGGCCAGGTGATACTGCCCACTCTGAGAATATTTATATCCCGCAAAGAGGTAAACATTTCAACCCGGGG---------------------------------CTGGGCTGCTCACCACCCACAAGGAAGAGGGCACAGTCCCTT a score=17401 s hg17.chr15_random 679288 386 + 784346 CACCCTTGCACTAAAGGTATACATACACCCACTAGGGCATGGTCAAGGTCAGAGATCTGGGCCAGACAGGAACTGAAGTAGATGGTTGGCCCTAACCACTGAACCACCTGCCTGCGGCCTCCTCCCATCAGAAGAGAGTAG-AGCCTGTTTGGCCAGAGTGGAATGGTGGCAGGAAGCAGAGGTACTTTCCGGGAGCGCTGGGGTCTGAATGGGTCCATTGAGG--CTGGGCCCTGCTGCTTCCTGTAGGGCTGAGTGGGAGAGGCTCACAGAGGCTGCCTTGTGCAGCTGGAGCGCATAGCCAGGGAGGCCCCCACTCC--AACAGAGGCCTCTGAGGCCTTGCTGGCCGGGGCTTTGGAAACTCTGACAGCGCTGCTTCCCTCACCTCC s mm7.chr9 66918607 361 - 123828236 CCCCCTTGCCCAGAAGGTATGC---TAAGTGTTAGG-------------CAGGGCTCTGGGTCAGGC----ACTAAGGTGCACGGCTGGCCCTAACCACTGAACCACCTGCCTCTTGCTCCCTTCCCACAGGAGAGAGCAGCAGCCTGTTTGACTA-AGTGGGAGGGTGGCAGGAAGCAGAGGTACTTTCC-AGAGAGCTGGGGTCTGAATGAGCCCTTTGAGGGACTGGGCCCTGCTGTTTCCTGTGTG-------GAGAGGCACTCACACTGGCTGCCTTGTGTTGTTGGAGTGTGCAGGCCAGGCAGCCCCCTTGTCAGAACAGAGGCCTCTGAAGCCAAGCTGGCTGGGGCTTTGGAAACTCTGACAGTACC-CCCACCTCACCTCC a score=3768 s hg17.chr15_random 681721 179 + 784346 ATGAAACA--CTTTCTTCCACCCACGGCTTTCTCTTCTCTCCCCATTTACAGCAGTAAGACAGCCTAACCTGGGAAAGAGAGAGAGAGGGAAGCTACTTCCAAATGGATGCCTGTCCCCATCAGTAATAACCAAGTCTATTCAAGTGCTAGATGTTAACTTTAAAAGAAGGAAACATCAAA s mm7.chr7 70454855 161 - 141766352 ATGAAATAAACTTCTTCCTACAAACAGCTTCCTTCTCTCTTCC---TCAAAACAGTAAGCTAGGCAGGCC------ACACAACACAGGGACAATCACTTCCATGTGGATATCCATCCTTATCAGTATTAACTGTA-----------GCTCAGGACTAACTTTAAGACAAGCAAGCATCAGG a score=1589 s hg17.chr15_random 682218 45 + 784346 TAGCTTTGTCAGGAATGTTTTTACCCTCAGTCTGTAAGTGTGACC s mm7.chr7 70455016 44 - 141766352 TGGCTTGGTCTGGGATGTTTATCCCTACAATCT-CAGGTTTGATC a score=9091 s hg17.chr15_random 682625 263 + 784346 AGGTAAATATTTCTAGAATGTATCTACTCCATCAGCTAGTGTAAGTATTCTAAACTGTGCTAGTATAGCTGCTTTAAATCACTGCTTTCTTCTGCAAATGGTGGCACCTTTAAAGTGTTATCTTGAAGGGGAAGTGAGTGATTTGCTCATGTCTCTACTGAACTA---ACACTGTTAACACCCAGTCCAGTTCTACCTTAAACAAGTCGGAGAAATACAGACATAA-TCCATACTTGTTATTTGTCAAGACTAAGGTAAAATAAGGA s mm7.chr7 70455060 246 - 141766352 AGGTAAACAGTTCTAAAACTTATCTACTCTGTCTGGCACTTTAAACATTCTGAACTAAGTTGGTACAACTGACTTTAGCCACTGCTCCTCTCTGTAAATAGTGGCACTTGAAAAA--------------GCAACTGAGTGGTGTACTCGAGTCTCT---GAACTATGTATTCTGCTGACACTCCATCCCGTTCTACCTTGAGCAAACCTGAGAAAT---GTCATAAAGCCACAAATATTATTT-TCAAGACCGAAGTAAAACAAAGG a score=4177 s hg17.chr15_random 682923 223 + 784346 GTACTGAAAACAATCCATCTCTCACCATTTCCTAAATAGCATAGTCACAAAGAGCTCTACCCTACCAAGTACTCTGCAAGTCCCACTCTCAAAGGAAGACTCACAGGTGACTGAGAAGATAAATTTGCTATTGTTTCCATTATCCTTCAGTTCATCTGACACCTTTGAAGAAATGCATTTGGATAAGACTCACAAGTCTCAGGGCCCCTTCTTTATGAAAGAA s mm7.chr7 70455774 179 - 141766352 GTACTGAAAACAATCTCTCTCTTGTCATTTCTCACACTATACAGCTGTACAGATTTCATTCCTACCAAGGCACCTGGGA-TCCCACTC--AAAAGAAAGCTAACAGGTGAC----------AAAACGGTATAGCCTCTCTCATCCTTCTGTTCAGAGGACGTCTTTTAC---ATTTATTTG----------------------------TCTTTAGGGTGGAA a score=6285 s hg17.chr15_random 683165 305 + 784346 CAGAAGCATCAGACTTTTCAGAATGCTT-----AAGTCATGTAAAAACGTATCAAAATTATTATCATtacagctaccaggaaatagctacctactccatgttagatactgcagttaagtatctcacacagtttcactgattcctaacaacactgcaaagcatgttactaacccttaaggagtaggaagctgaagctctgagaggctatgcaactactcaatg-----------------gaaatgtggggatgtgaactc-----tacctagctccaaagggcgtacttttttcTAAAATTTCTAATTTTTTTCCAATTTCACAATGGAGGC s mm7.chr7 70456071 301 - 141766352 CGGAACCCTCA---CTTTAAAAACACTTTTTAAAAGCCATGTAAAACCGTACCACAATGAT---CTTTTTAGCCACCAGGAAGCAGA----------ATATTGGACAGTGTA-CTAAGTCTCCTAGACCATTTCATGCATTCCTAAGAACAT-------AAtattactaccccttacaaggaaagaagc--aagctcc-agagtcaagtgcagtgctcaaggcttcaaaaccgtggaaggaaagctgaggatctgaactcagatttacataactccaaacag-ggaatttcttctaaactat---gctccctcccAATTTCACAATGAAGGA a score=920 s hg17.chr15_random 683641 110 + 784346 GAACAGATTTCTAAATCGGAA--------------TCTCTTGTTAAAATCCTTAGAGCACTAGTTAAGCCCCACTTCTTTTCAAAAAATAACCGACAGA-----------------------------------------------TTAAAAAAA---AGGTTAGAAATCCTTT s mm7.chr7 70456434 174 - 141766352 GGATGCATTTCAAAACTGAAAAtttctttttttttttttttttttAAGTCCAGAGTGTACTCTTTAAATCCCAGTTATTTTCTAGAACAAATCAACAAAAAGAGTTTTTAAAGCTGGGAAAAGTGATACACACGCGTTATCTATCCCTAAGGAAACCAAGGCAAGGAAACCTTG a score=16264 s hg17.chr15_random 683751 755 + 784346 TAAAGTAAATTTCATCAGAGATCTGCAAGTGAATTGTCATTTTGGACAAGTCCCCAGAGTTGGTGGCCCTCTCCTGTGTACACCAGCTACCACTAGGCAGTAAAAGTAATTT-ACCCAATTCAAACACATACCGTGCCTGCACTATGTTAAGACCACTGGCAAAGAGG--------------------------------GTACAAAGTTAAATAAGGTCTATCACAGCCCTCAAGGAGTTAAAGGACTAGAGGAGGAGTCCATTTATAGTATAGTATGTGTGCAGTTACCATTTAGTCAAGGCAAACGAACTGTGAGAAATCCTACAACAATAGTACCTACAGTATAACATGCCATCACCGCCCACAGAAGGAAAGCAACTGGTGCCCTCGTCACGTTATGTTGTTAGTACTTGCTTACATGATGTCCCTCCCTGACAATCCCTTCCAACCTCTGTCAGCCTCCTTCCCCACAATCACACACACACACAAAACCACACTGCCAGGAAGGGAAGCCATTGAGTG--AGTATTGTGAATCCTACAAGTGGCTCTGTAGTTTAAAAGGGCAATGCCTGTGCCTGAAGAAAATTTGTCTTTAGCTTCATCAGGTGAAGAAAATTGGTTTT---ATAACACAAGGCCCAC--CAAACCAGAAAAGCCCAGGAAC-GCTTCTCCACAGGACTCACTTAGCACGAGAAATCACTCAGAGCAAAATGACGCACACAGTATTTGTCAAATTTTTCTTTTTCATTTAGCAGAAGGTAAGGTAAAGGACTACAACTGAAGTTAATA s mm7.chr7 70456816 688 - 141766352 TAAAGTAAATTTCACCACAGATGTGCAAGCTAATTGTCATTTTGTACAAGGCCCCAGAATTAATGGGTTTCTCCTGTGTACAC----TATCACTAGCCAGTGAAAATCACCTCACCTAAATCAAACAAAAGCTAAACACCAACTGTGTGGACTTTTCTAGaaaaaaaaaaaaaaaaaaaaaaaaaaaCAACACACACACAGAGCATAGCAAAATACCACCCATCACAATCCTTAAGGTGTAAAAAGACTAGAAAAGA---CCATTTATACTACA-------CATAGTTCCCATTTAGTGAAG-CAAAT------------ACCCTAGAACAAAAGTAT-----GTGTAGCATGTTACCACAGTCCAGAGAAGG-----------TGTCCTGGCCACCCGATTTTGC-AGTATTTGTTTATATTATGTAACTAACCAATAA---CTCCCAACTTCTGTCCACCTCCTTTGC-----TCAC-CACACCCACC-----------CCAGAAAGGAAA---ATTAAGCACAAAGACTGTGAGTCCTG--------------------------AATCCCTGTGCCTTCAGAATATTTTTCCTTGGTTTCATCAGGTAAACGAAGCTGGGTTTCATACAAAGAAAAGCCAAAAACAAAACAGAAAACCCCACACACCACTTGTCCATGTTATTCACATAGAAAAAAAAA---------GCAAAATGCCATGAGCAGTAGCCTTCAAAGAAAAATTTA-AGTTTAACAAATGTCAA-----AGAAATACAACTAAAATTAACA a score=46877 s hg17.chr15_random 684517 2540 + 784346 AGCCATTTTGATCATTTGTCACTATAAATGATAGACATTTAAGCTAGTTCCATCTGGGGAAGTGAAACAGAATCATGTTCATATAATAAGCCAGACGAACCAAATTCAGTGGAATACGTGCACCCAAAACTGGACCAGACTTGTACTTAATGCAGCCTGCAAATCCCCAAGAGTCCACGACAGAATACAAGAACAGTAACAC--TGGTTTATCTCA-ACTCATCTT----------AGCTCCCTCACAAACTTGCCAAT-AATGACCTTTCAAGAACTGCACCGTTGGTCCTCATCTGGGCAATCCCGTGGCTTAGAAA----------AACTGAATAAAGTGCTTCTTCGAAAAATAAAACAATGCGGGGAGGGGGGAGTAGTAACAAAAAA-----------------------AAAGGCACACTGGTTTTTAC-TGTACTGAA-GCAATAAATTCTCCAACTAACTTCATTA--ATGAGTATCAGCAAAGAATGAA-CACCAAAATACCGCTCAATCCAACTTTCATCGTGAATTCTTGAATTCACAGTAGGATCATTAAATGTGACGGTATCACTCTGCTATAAAAACTATTTCCAAAACAAA-ACAAACCTATCTACCCCCTTTCTTGATTTAAAAAAAAAAAAAAGAAGAAAGAAGGAAAATTTGAGGGTTTTTGCTTTTTTCAACT---TCACATACCGGTTTGCCTTTGCAAAAAAAAAAAAAA-------------AAAATGTTTAGTCTCAAAGTATAGCTGCAAGGTGGACCGGCTGC---ACGGGTCCCAGAGGGCCGCTCGCCTCCGACGGTCGCAGTTTCAGCCGGGCCGCGCCCGCGAGAAACAGCGGAGAGGCCCCAGCAGGCGGGCGCCGCCGGACAGGTTTACCGTCCGCGTCGGCCCCGGGGAACCGCTCCCTCGCGC--CCGCAGCACTTGTTCGCGGCGCGGACTCCACACCGCGGCCGCCCGCCCCAGGGGAGGAGTGAGTCCGCCCCAGC-GGCGCCA---ACCCGGGGACCCGGGG--CAAGGGTTCGGGGCCATccg--ccgccgggcgcgccccccATCCGGAAAGCGGCGACGGCCCCCAAGTTGGGCTGCGGAGTGGGAGGCGCGCCGAGCCCCAAGCAGACAATGCGGGAGAAGGGTGATGCGCAGGGAGGAGGGGTCCGCAAAGCTGAGGTCCCCGCGCCGCCCGGCTACCCATCCGTGCCGCCCGCCCCTGAAGCCCCGCGCAGCCCCCGACCCTCCTCTGGGGCCCGCCCCACCGAGCGGCCGCAGGGGACGGGCCGCGCTCCGCACCCCGACCCCTCCTCAAATCACAAAACTTCCCCCAACTCCGCCAACTAAGTTGCGCTCTCACCGTGCGGCTCCCGGGGCTCCCCCGCGGGCCGAGCCGAGACAGCTCCTCACCTTCGCCGCGGAGAAAGACAATAGGCTGCCTCTCCCCcggcggcggcagcagcggctgcggctaaagcggcggcaaccgaggcgagcaatgggcacggcggTCTCGGCCGAGCCGAGGGGCTTCACCGCTGCTGTTCCGGCTCCGCGACAGCTCTGCACGTAGCCCCAGCCACCCCGCGCACCGGCTACAAGCCGCCCGGGGGTGGCCGGGGCACGCAAGAGGGCAGTAACGTCTGCGAGTCCTCCCGTGAGTACACGCGGAGCAAGGGCTGCGAGCTGGGATTGCACGGCAGAGCTGCCCATCCCGCTCCACGAGACCAATAGTAAGGCACCTGGGCGGGGCGCTCAGGTTGCTAAGGGAGGCTGAGGTTGACCGCCGGGGCTGCTCTGTGGCAAAGTGATCACAGCAGGGTGGCTGGCAGAGACTGCTCTGGGAAATGCCCACTCACGGTCTCCTCTCCGCCCTGTTTCTAGAAACTGCCCTTTCTCTGTGTG-CTCGTGGTTACCTGAGCTGTAGCATTTAACCACACATCGTGAAATGATTTACTCCTCTATTTCCCCCACTTCAACTCAGGAAGTGGGGTTTAGTCTTGTGTGTCCACAGCCTAGGACAGTCTAAGGTATTAGGTATTAAATATAGGTATTAAACAAGTGTTGGATGGATGCACGGCGCTATGGCGGAATCACAATTGTGACAGTGCATTCCGTGAACTTTTGGCTACTCGATCACCACAGTCGTTCCGTGTTCAAGCTGCAAAGGACCTCAGAAATCATCGGATTGCTTT-GAGAAACAAAATGTGGTCCGTGTACCAACGGCGGCCGAGGAGAATATATTAGCTGGTACACGGAGAAACTTCTTTTTTCAAATAGTTAAGTGTTTTAGTGC-TCATTAGGAGGGAA-ATGCCTATCACGTCAAATCATTGTTTCATTAATGTTACTTCTTAGGTCAAATAAAAAGTGGCAAAAAACAAGTGTATTTCAAGAAAAGTGTTAAGTGAAACTTGAGACACtttatatgcagttcaagaatgtaaaatactagttgacagtgattgaagtaagaacagttggttaggtaggaggagaagattattggctgggaaggaggaggagggaaccctctgtg-gtgctgattctgtattttgacctgggtgatggata---------acaaaagta---------tgtacatcaataaaaaatacat s mm7.chr7 70457534 2162 - 141766352 AGGCATTGTG------TTTCAGTATGAATGATAGG-----------GTTCTCTCTTGGGAGCTAAAACTGAATTACCATTACAGCGCAAGTCTAGTCAACGAAATGCAGCGGAATG----------------------------------------------ATTCCCAAGAG---ATGATGGTGTACAA----AGTGACACACTGGTTTATCTCAGAGTCATCTCGACTGATAGGAACTTCTTTACAGAC-----AATGAATGCACGTTCAAGAACTGGAGCGCTCCTCCTGACCCGGGCAATCCAAAAGTTTGGGGGGTGGGGGTTTAAATGAGTAA---GTGACTTCGGGAAATCA---------------TGAGGGTAGTAACAAAAAacagacagacagacagacagacaAAAAGGCACATCACTTTGTAAATCTGCTCAACGCAATGAACTCTCAAAATAACTTCATTATGAAGGGGAAAAGCAAAGACTGAAACACTCAGAGATTGCTCAATCCA-TTTTCATTGTGAACTCCTGAGTTCACAGTAGAGTC--TAGA-----------CACTTAGAGTTAGCCAATATTTTCAGCCGAAAGACAGACA----------CTTTCTT---------------------AGCGAGAAATAAA--CTGAGGGT----GCGTCTCGCACCCCAGTTAAGTGTCAGCGAGCCTATTTACGAAAAGCAGTGATTCGCTAGTTCTCAAAGTGCTTGCACTAGAGCTCGAGGGGCAGAG-GAGTCGAATGCGCCACCGTTCCCGGGGCGCCCACCGCGCCC-----------------CCCTCCCCATCTCGGGAGAAA----------GCCCCCAAAGGTGGCCGGGGCGCGCAGTGTTTACCCGGCTTGACTGCCCCGGGGAGCTGCTCGTTCCCGGAGCCGCACTCTCTGTTCGAGCGGCGCGCCCCACCGAGCAGCCGTCC--CTCAGAGGAGA---------GCCGCAGCCGGCGCCACAGAAGCGGGCAGCAGAGGAACGTGGGTCCGAGGAGGCCGGGATCGGCGGCCGCGCTATCCA-------------------------------------------------------CCCCTGGCTGCCGATGCT---------------------AAGAAGGGTCCGCCA----------CCCGCGTCGCGC---------------CCGCGCGTCCCCGCGTCCC---GCAGCTCGCGC------------GCGCGGCCGA--GAGCAGCCGAGGGGGAGGGGCGGCTGCGCGCGC---GCCCCCTCCTCAGACGCCCAAACTTCCCTCAACTCCCTCAACTAAGTTGCGCTCTCACCGTGCGGCTCCCCGGGCTCCCCCGCGGGCCGAGCCGGAGCAGCTCCGCGCCTTGGCCGCGGAGAAGGACAATAGGCGGCCGCTCCCTCGGCGGCGGCGGTGACGGCTGGAGCAAG------------------GAGCAA---GCACGGCGGTCTCAACCGAGCCCAAGAGCTTAGCAGCAGCAGCTCCGGCTCTGCGACCGCCCTGCACACAGACCTGCCCA-CCCGCGCATGCGCCGCCTGCGGCCC-GGGGTGGGCGGTGC---------------AAC-----------------------------GAGCCAAGCCTAAAAGTTTCTATTGGACAATTAGACTACCCATCATGTTCTGTGAGCCCAATAGGAAGGCTTCTTGGCAGTTGGCTCTGGTTGCTAAGGAACGATGAGGTTGACCGCCACTGCTGCCAGGCGGCAAAGTGATCAAAGTCGGGTGGCTGGCAGCAGCTGCT-GGGGAAATGCCCACCCACCTTCTCCTATCCGCCCCATCACCGGAAGCCACCCTTCCTCTGTGCGCCTGGTGCTTACCTAAGTCGGAGCACTT-ACCACACGTTG--------------------------ACGCTAAGACTC----AATAGAGTCT--TCTTAAGAGTCCAAGG--TGGAGCGGCACAAAGTACT------------CAAGTA---------TGTTGGATGGGTG--------------------AAGATTGTCACAGTG----------ACTTTGAGCTATTCGATCACCACAAAATCATTGCCTTTGAGTTGCTATGGACTTCAGAAACCATCTAGTTGCTTCGGAGAAACCAAGTATGG-ACATGTTCCAATGGTGACCCAAGATACTACATTAATTGGTACAAAAAGAAACTTCTTTTT---GATAGTTACATATTGTAATGTGTTATTAAGGGAAAACATGCCTATAATGCCAAACTATTTTGAC----ATGTTATTTTTTCGGTC-AATAGAAAGTTGGGGGGGGGGGGAGCCGGGGATTATGAATATTACGCAAGAAATGTGAGGTTTTCTGTGCAGTTTAATa--------------tttattgtggtcgaagtaagaa-aggtagtttcctaggaggagaagggtattgactgggaaggaacagaatggaa-tctctgcgagtactggccttgcatttttatttaggtgatcaaaacatattaatatgaaaatattatgtggctgtacccctaagatAAATACCC a score=4772 s hg17.chr15_random 687057 239 + 784346 ccagtgcactttagattagtgca-------ctttacacattttata-------------catgtatttttaatgtcaattttttaaaaaTC-TGGTATGGTATATACCCCCACAACCCCCCCCCCCAAAAAAATGCAAAGATGCAAATGACTGCCATTTGGGAAACACTGATCCAGGCAGGCTCACTAGCAGTGACCAAACACCTGAGAAAGGGTATTGTGAATACCTGATGTATGTGCCAGGAA-CTTCCATGGTTGAAT s mm7.chr7 70459871 248 - 141766352 CCAAAGTATATTATATGAATGAAGAAAATGTTCAAAGAATTATATGAAAAGATTAACTTCATATAATTTCAAAGTCAGTTTAAAAAAAATAGTAATACAAGATATG-------GACCTGCC------AAAAACTGCAAGAATGGAAGTCACTGTCATTTGGGAAGTTTTAATCCAGACAAGGTCACTACCATCATGAAAATATTTAACAGAAAGTATTATCAGTGCCTGGTGATTGTACCAGGCATTTTCTGTTGTTAAAT a score=5479 s hg17.chr15_random 740708 393 + 784346 AGCCTCTTCTCCTGGTCAAATCCAGTTTCCCCTCAGTTTCCTTCA-TCGGAATTCCTTGGCCTTCGTCATTCTTGGCTGCATGAACCTTTGATTTCCTGTACTCTCTGGTCCTGG-------------------CTCTAGGAAT---GATGTTATATGTAGCGCCTGGCGGTGTGCTGTGCGCTCACCGGAGGAGGTGTCCCT-------------------ATTTTGCAGGTGATGGAACTCAGTTCTGGGACCTTTCTGAAGTCCCGCGGATCCATAGGCACAGTCCGGCCGCAGAATATCTGGTTCCTCCAATGTTTTTGTCTTCCAGTCTCCGTCTTGAGTATCTTTTCTGTAAATTCATTTGTTTCCGTGGGTCCGACTTCTGTCTATTTTATTTTCTGACATGGTTTAAAACACACCCAAGCCCTGATT s mm7.chr7 88053786 397 - 141766352 AGCTGTGTCTCCTGCTTAAATCCAGTTTCCCTTCTGTTTACTTGACTCAGA--TCCTTAGCTCTCATCATCATAGGTTGCTAAAACCCATGTTTTCCTGTGTTCTCTTACCATTGGCACCATTTCTTCCCTTCTCTCTACCTTTCTCGGTGTTGTTTCTAGCCTCTGTCAGTGTGCTCCATGCTTCCCTACAAG---GTCCCTGAATCATTTTTTGGGGGTCATTTTGTAGCAAACTGAACTGTGTATTAG--CCTT-------TGCCAAAGCTCCAGATACCAGGTCTGGCTGCTGCATCGCCCTATCCTCCAA------------CCAAGCTCAGTC---AGGATTTCTTCAGTCA--TTATCTATTTTCAGATGTCCAACTTCTGCT-------GCCACCAACATGCATAGGAACCAATCTAAGCTCTAGTT a score=4132 s hg17.chr15_random 741132 457 + 784346 TTAGGCATCCTGCTGGGGTCTGAAACTGAGCCCAGAGCTCTTCTCAAACAGGAGCTGCTGCCTG-GTTCTCTGCTAACCAGCTGGTTTTATGTATGGATGGCTC-------------CTTTTCGTTCTTTCTCTACCCGGGGGCACAAGCCCTTCGTTTTTAGCCCCTGGCTACT-GCTGCAGGTCGCCCACCACGTCCTGACCC-----CACCTGCCGCCCCCTTCACCCTTCAGTCCCCCCACCTCATAGATGGCTGCCACTGCC-----ACAGCTGGTTCCTTGTTACCAGATTCTCTCTCCTATTAATATTATTCCTTCTGAATATGGATGCCAGGACCAAGGTAAAAGACCACCCGGA---CTTAC-----------CATGTTAAGGATTTGTAGCTTGTGGACTAACTTGCGCATTCGTAATTCCACTTCTGTGCCTgtgcaggctctgccactattctgcttggggtgcaatccgaactccgtcactaa s mm7.chr7 88054196 473 - 141766352 TTATGTTGCCTGTAGACTCCTCAAAAC-AGTCCAGAGTCCCTTTCATGCCCTAGCTTCTGGATGAGGTTTACATTGACCAGCCAGTTTTGTTTGTCTCCTGCCCTTTGCACTCtttttttttttttttttttatGCTGTGGCACACATGACTCTCTTTTCCTGCTGCCATCTACCAGCGGCTACTCTTACTCTTGGCCTACATCCATGGTCACCTGTTACCCACGT--------GGGCTCATGTCCTCAGAGTTCGATGGTTCTACCTTTGTTTGGCTGACACTTTCTTCTCAGTTTCTCTC-----------AGATTCTTTCTGAACATAGATGCCAAGGAAGCTGGCAACAACCA-CTGGATTCCTTACAAAACCCTCGATATGTTTAGGGCTTACTTCTAGCCAACTCACTTACATACTTTT-ATCCAACTCTTATTGCTGTCCAGGATCTGAACCTATTCTACATGAATTGAAACCTCAG-TCTGCTACTAA a score=666 s hg17.chr15_random 741632 24 + 784346 ggaatagaaatagtacc-tgtcttc s mm7.chr7 88054812 25 - 141766352 GAAATGGAGATCACACTGTGTCTGC a score=3044 s hg17.chr15_random 741994 577 + 784346 AAAAAGAAAATATAAGTGAAAAGAGTTTTTTTCACAGCACCCAGCCCAGAGATACTCATTTAGCTCC-TGTTGGCCATGCTGGGTACAGAGTCTCCCCGAGAGCTGGACCAGCCTCCCCCTGCCTCCATGCACAGTGGTCCGGATCCCCTTCCACCCTTCCCTGCACCCTGTGGTCGCACATTCTTCCTCCGGGTTATCAGTGCCCATTGCTCCCACCCTTCAGTCATTCCCTTGCTGGGCAACCGCTGACCGCTCCTTTGCCCGACATCATACAGAGTCTTCGATGATTTGGAATGTATTTTCTTCCTTTTTAAGGGCTCTGAAGTGTCTTTGTGTAAGTGTGTTCCTGTTGTCTCCAAAGAAACAAA-CATTTATCGGTGTCTCTGCAAAGTAGCC------------AAAAAAAGCTTTACAAAAGAGGTGTATGAAATAGCACATAATTTCTCTCAGAAATTCAAATGTTTTAACCCTGCTTTAAAATCTCCCTGACCAACAATCATGATTCAACTAATTTGAGTAGATTTCCTCATGGTCTGTGTCAGTCTCTCT----CCCATCATTTGTCAGGCCAGAAACCCAGTGG s mm7.chr7 88054837 399 - 141766352 AAAAAGAATATACAATTAA-------TGTATGCAC--------------ATATATACAATTAATGCCTTGCTGGTCCCACTGGGTACAGGGT----------------------------------CACACAC-----------TTTCTTGCCTCACGTCCCTAT-CCTTGTA-------------CCCCAAGGCCATCCTTGCCCATTGTTCCCA-------------------------------------------------------------------------------------TTCTTTCCTTTCAAGTGT---------TGTTTATGTATGTGTGTCAGTGTCATCCTCAAAGAATCAAAGAATCCATTGGTGTCTCTGTaaagaaagcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaagaaaaagaaaaaag--------aaaaa---aaaaGCTTTCACCCT--TTTAAAACATTACTATTCAAT-ATTGCAATTGAACTCCTTTAAGTCTATTTATTCATTGCT--------TCTTTCTAGGAACCATTGTTTGTCATGTCAGAAAGTAAGTAG a score=17427 s hg17.chr15_random 752741 631 + 784346 gctttatgatGAAATAAATGCTTTAATTTCTTAACGTTAAACTTTGAATTTTATTGTGAGAAAGAACCTTTTTTGTGGATTTGTGCTGTTTCTCTTTTGTAGTATTTTAAAAAAATCATTCAGGCTTATGTGTATTTTCCT-ACATTTGATCTGTTAAAAAG-ATTTATTATGGAGTGTGTA-GACGCACATAACAAATTAAACAAAAATAATTCCATTTCA-CGTCAATTATTACAATGTCCTCCTGAGAAACATGAGCATTAGAAAAAAGCAACAGCTATGTTAATCAAAATAGATCAATATACTTTATATCTCTTTTGGATAAGAAATATACTAACATCTCAAAATTATCAAACTTACGATGGTTTTCCCAACATAAATAGGAATTGCTGACATCTTCTTTTCAGTGGCCAAAGAGGAATGAGGATCCTAATA----GTGCAAAGCACAGTGAGAAGTTTTAGCCCAGTATAATTCTGATGGTTGGTCTCATGTACCTCCTTACTACATTCAGGGATACAAAAGAAATCCATTAGCCTTAAAATAATTCATGAAATCTGTAATTCAAACTCAAAGTAAGCCGTATAATTTGGATCT----ATTTTTAAAAAGGAGAC--ACTTTGTTATCTCAATAGCAGAT s mm7.chr7 88061154 619 - 141766352 GCTATACACTTAAAGAAATGC---AATTTCC-AGAGCTGAACTTTTAGTTTGCCTTACAGAAAGAAGCTCATTTGCACGTTTTTGCC-TTTCTCTTTCACAACAATT---ATTTACTGTTCAGGGTTCTCTTTATCTCCCCCACAATTGATCTATTATAGTGTATTTATT-TGGGGTATATATAATACACATAA--AATTAAA------TGTTTCTGCTCCTTCATTCATTATTAAAATGGTTTCTAGAGAT-TATTTTTAACAAAAGAAAGTCA--------TTAATTGAAATAGACTCACAATGGTCTTGTCCTTTTTTGTTAAGCAACACATCAGCTTTTTTAGTCGATTACATTTATGCTGATTTTCCTAACATAAACAAGAATTGCTGACATCTTCTCCTCAACAGCTGAAGAGGAACAAAAATACAAATAAATGGTGCACAGCTCCATGGGCATTTTTAGCTCAGTGTAATTCTGGTGGTTGGACTCATGTACATTCTAGTTATACCCAAGCATATGAAATGAATCAGTTATCCTTAGAACAACCCATGAACTCTGCAACTGAAGCTTGAAGTAAGTTGTAAGATTTGTGTGTGTTCATTTCTGAAACAAATGTGAGCTATGCTATATCAATAGTAAAT a score=10684 s hg17.chr15_random 753372 618 + 784346 ATTTTAAAGCAAGGAACTCTACAGTAATATAAACCAAAGCGTGGATCATTTTAGTGTATTCTTATTTGAAAGACTTTAAAATTTCAGTAATACCCTAAGTTGACTTTTACAAGCTTGCTCTTCACTGAGTTT----AAATTCTATTATGTATAAAATAGGTCAATGTACACTTTATTCTTCTAGCTTTCTGCTGCCTACTCCCCATTCCTGCCCCGCAGCAGGACTTGATGTCTCATCTATTTC-TTATGACAGGCAAAATCTTGCTTTGGATTTGACGGGGTCAGACTTAGTGCTAAGGTAAAGATCCTTAGGAGGTTGGCAAACCAGGACAATCACAATGGCCAGGCACTGAAAGAAACTAGGTCTGCAGTTCTTGTCTGGATCAAACACAACTGCAGTGGATCTACAACCATCACAGAATGGGACCAGTACACACGTCACAGTCAGAAAAAAAGGCGAGGGAATTGCTGAACCTGGCAGTGGCCTTTGGGTTCCGACAAACTCTGATCCTGACTTACCAACGTTTCTGTTC-CAAAAGTTCAGTTTTCATATAGTTGACTGAGCTTCAGAATACATTTTTCCTTGAAATATTATTGTAAGCTGAAGTTAGGTTCCTAGAAA s mm7.chr7 88061899 561 - 141766352 ATTTTAAAGGGTGGAATTCTACACCTGTACAAATGAAAGCGTGAGTTA-TTTAACATAATGTTATTGGGAGAATTTCAAATTTTGCATAACAATTTAAAAT----------ATTTTGCTTTTCCCTGAATTCAGTAAGTTTCTAGTGTGTGTAAAGTAGGTTTCTGTGCCTATCACTTTTCCAG--------------CTCTGAACCCCTACCC--TAGCAACCCT-----ACTGATCTTCTACATTATGTCAGGC-----CCTTCTGTGGGTGTGA-----------------ATAAAACATAGGTTGTTCTGAATCCGAGTAATAAGGAT-ATGACAATGGCCGGCCTCTGGAAGGAAGTCTATCTGCAGTTCTGTACCAGTCAGAAAACACCTACCATGGATCTACAATAGTCACCGTATGGGAACAATTCATATTATAAAAGCTGTGACATATG---GGCAATTGATCCAGCTGGCAATGACTTTCAGGCTCCAGCACACAC---TCCTGACTCACCAGTCTTCATATGCACTATAGTTCAATTCT-GTATTGCT-ATTGAGGATCTGAAGACATCTGCTTTCAGCACACTATTATAAACTATAATTATATAACCAGGAA a score=4393 s hg17.chr15_random 755620 246 + 784346 cttaaaacacaacaaagt-tattgtcttgtaattc--------------caaaagggtcccaggaggctaca-gtcaagctgttggcaggattgcatttcttttggacgctctaggggagaggctgtttcttgcctcttccggtttctagaggacacttgtattcttagactcttggccactttgcaccgacctctgcttcc---------tcatcacatgtttttct-------------------------------ctgaatctgacactcttgtctccctcttagaagga----cctttgtg s mm7.chr7 88065296 296 - 141766352 cttaaaacacatcaaaacctactgacttacagttctggaagtcagaagtcacaaaagtgttatggggttgtatgtcaaggtgttggccaggt-gcattgattctgggagctccagaggaga------ctcttgtctcacccacttcctggaagacacctgcacttttgagaccttggccccatt---ctcacatctGCTTCCAGTGGCTGTGGAACACTTGCATTTCTGGACTCTAGGATTTACCATTCTGCATCTCCTCTGAGACCCCCACTCTTTCATTCCTCCTGAAATAAGAAGCCACTGGA a score=10840 s hg17.chr15_random 755866 603 + 784346 attgtattgggct----cacatggagaatccaggattatctctccatcccaagatccttaaatgaatcacatctgcaaa-gcccttttgctgagtgaggtagcatactcacaggtttggggttttgtgcattggcacatggacatatttgcagtgctgttattttgcctgccacTGTCACACCTACTGCATTGATGCAGGATTTCCACAAGAATAAGGAAGGCTTCGATTTGAAGAAGATTTTAGTAGAATTTTGGAGACTTTCTTTAATCACCTCATTGTCATTGAACTGGTAATAGCCA--AAGCCTTTTTACCCTTTTTATACTTATCAATTATTTATTTCAGAGAATgaaataaatgtttttttttcttttttttgacacaagaagactggaccagattggttaggcagttttacaaaggtcacacaattagttaatagcaaagctactctagaatttggccattttacccatcataaagcactcttcacccatcag-ctgctcctGACCAAGCAGAGAGCTCTTTCTTGAGTTTAGGACCCTAAGCCCTCAATTACGATGACATAAATCCAAATTGAAGCAATTATCTTAAATTATAAAAATGCCC s mm7.chr7 88065758 547 - 141766352 ATTGGATTAGACTGCTCTACTTGATTAATCTAGGGCAATTGGCCCACTCTGAGCCCCTTACGCTAATTATATCTGTAAATAGCCTCTTTCCATATGAAGT-GAGTAGTTCTTGGTCTGAAAAGCTGTGCATT--TTCTTGG---TGTTTACAATGAAGTA----TGCCTGTTCTCAGCACATCTTCTGC-----TGTAGCATTGCCATGGAAACAAGAAAGTCTTCCAT----------------------------------CTTTAGTCACTTTGTTGTCATTAAAATTCCTACCTCAATCAATCCTTTTTAACCTTTTGCTTCATATCTATGATTT---TCAAAGTATACAATCAAC----TAtattccttttttccaaataggaagactggactaaagaggttaggcttttctataaatatcgcaca----gttaataaAAACTATCCTCTGGGATTTGGTTGTGTAGACTACTTTAAATTATCTTCTACTTTTGAGGAGGCCTCTGGCCAAACTGGAAGTCCCCTAGTGAGTTTGGGGTCATAAAATTTCAATTG---TGACATGAAATCAACTAGAAACAATGATCTCAACTTCCAAAG-TGCCA a score=16424 s hg17.chr15_random 756767 1240 + 784346 ATTTCCTTATCCTAAAATCAAGATGTTCTTCAAAAATGGGACATTATGCTTCAGTAAGTGAATGCTTGAAT-GTCTTAACAGAAATTGGAAGTAAAACAGAAATTGGACCTTTGTAAAA---ATACTGGATtcctgggtcttccagtaattcagtgaagtctttccacagtcaagtttcttaaccttttgggcttgattttctttatcgaaaaagt----gagggtttcaagcaggtgacctagctgtctctcttgcgctatgacagtcACCCACTCCAC-AGAGGCCTTGATCTCAGCTCTGTGTGGAG----GCGGCTGGTTCCACATCAAAGCATTCCACATTTCAAGAGCCCCATGAATAGAAGGCTTTCTTTCACTGAGAGATACTTTTTGAGTATTATAAAAGCATAGGCCATTTTTGAAATGTTTAGAGGGATCGAAAATTTAAATTTATTTCCTGACTGAGGCTGAAACAGTTCTTATTGAGAGATTTATCTGAATAATACATTCATGTGTTAGAGGAGAGACACTATCATAGATGAAGTATACTTTCCTGAGGTTTAGA---ATTCTAAGGGGCTCTATAAAATTGGGAGAAGTCACAAGGCTCTAATAATAGCAT-TTATTGAGATGGTAATTG---TAGAAAAACTG-TCTTTTTTACATTTTTACTGGAGTTATTTT----TTCTTTAAAAGTGCCTTTTTTTAGATCCAGCTAAATGCTGTCCACCTGTGTTTGTGTACCCTCCCTGCCCCCACCCTTGCTGCATGcacacacacacacacacacacacacaaacacacacacTCCTGCAATATGCTAAAAGCCAGCTCCTTGGTATGCATTCCTTGTCAGAATGCCATCTTTCAACATTGTCAGTGCAGTAATTTTCGGAAGGTGGGCAGTTCTCAGGGCCAAACAGCTAGAATGAAGCCCACCATGGCAGAAGGAGCGGCTCTGGTCCCTTTTATAAACACACGGTATTGGCCAGGAGAGGAGGAGGAATG--AACCAGGAGCTGGCAGAGTGCCTCACGGGGCCTTTGGGATGAGGTTTCCCTGGGGTCTGCTCTGAGAGTAGGTGCATGCAACAGAAACGTCACGTCTGGTGCCTGCAATGGCCTGGTGGATTGGAGCTGGATGC-CAGCACAGAGCAATGGGTTGGGGGTAAC---TCGGACTC-----TCCAAGTTGTCAGGAATTCAGCCCGTAGACTGA-CTTCTAGGCTGCTTCCAGACCCAGTGGGAAACTGAGTGCCTGCCGG s mm7.chr7 88066305 1114 - 141766352 ATTTTCTTATCGCAAA-TTAAGTCGTTGTGCA-------GACATCATG-TCCTATTTGTTAATGCTTGAATTGTCTCGGCAGAATGTATAAATAAAACAGAAATTGGACCTTTGGAAAACAAATACCATGTGCCAGTATCTTCCAGTAATTCA-CGAATTTCTGCCAAAAATAGAAATCTCATTCCTTTGAACTTTATTTACT--ATAGATAAAGCCATGGAGGATTTGTAG-ATGTGACTTAAGTGGCTCTTCTGGTCTGTGACAGTCAGCCCTTCCAAGAAAGGGTTTGAGCTAAATTCCAGGTGAAACTTAGTTGCTGG---------AAAGTGTACTCTGTGTCTAGAAGTCCA-AATCAGAAGAATTCGTCTATCT---------------------ATAAAAGCTAAGGCCATTTGTGCAATGCGTAAAGACCACAGAAATGTTAAATTATT-----------ACTAAGACATTTGCTCTTGACAGATTCATCGGAACAGTTGAT--GTCTGTTAGAGGGCAGAGTCTACTCCTGGTTAAGTAGTTGTCCCATGGCTTCAGACTGATTACAAGGCTCTTTATACAAATAGGT--------------------ATAGCTTGTTACTAAGATGATAACTGCATTATACAAGCCACTGTTGTTTATAGTTTTAGTGGAACCATTTTAACAGTCTTTAAAA-----------TATACCTGGCTAAACTCTCTTTACTTGTCTCTGCACACATTTTCCACTGCC--CCCTGCCGTATGTATTTTCCCTCTCACA------------------------------ATG----------ACTCCT--GTTGAGGATCTCTGCCAGAATACTA-CTTTAATCTGTGCTGGCACACTGATTTCCTGCAGGTGGGCACCTCTCAGG------CATCTGTAGTGAAGCCCACAAAGGTAGCCAGGACA-CTCTGGTCCTCCTT-TATGTGCCTGATCTTGGCCAGCAGCAGAGAAGAAATATACACCACAGATGGACAGAGTGCC-CATGG-----TAGGCGTCTTGTTTCTATCCGGTTTATTTTGGCAATTGG--------AAATAAACTGCA------GAGATTATAAATTCTTGACCCATAGGAGCCATGTGAACAAAATGAAACCATTACCAAGGGATGACGAATGGGACTTCAACATTCACCATGCCAGCAATTAAGCT-GAAGACTCAGCTTCCAGGCATCCTGCACACC-AATAGTAAGCTGAGAGTTTGTTGG a score=8022 s hg17.chr15_random 758043 965 + 784346 ACCATCTCCATATCCACCCTGACGAT--GGCATAGACTGTGTGGGGTTATAGTGTTGTTAGCATCTTTGTCAGAAGACTCAAAGAGTAAAGCCAGGGCTGCTGGTTGAGGTCTTCAGTAGCACAGCTGGGCTAAGACAGTCAGGTCACTTGAAACGCCCTCCCCTCCACCCCACCTCAGACTGCTCCCGTGTGAGCCCCGCGTGTTCCTGTTACAGCCAAGGCCACAGGCGATCGCAAAGCATGCCTCTCCTGATCAGAAGTGTTCTCTAAACTCCCACAGTGCTGTTTCCTCGTGTGCTCATCTTCACATTTATTGCTATGGATCTAATCTTACAGCTTTGTATATACTTCCTATTTCCTGACTAAAGTCTTCCTTCTTAAGGAAATTCTAGATATTTTCAGATCATTGTGATTTTGTCCTCAAGAACACATCTGACCCGTTGAGATTCTCTGTTCCAGTACTGCATCACTTGACAAATTTGCTAACAACCATATAAAGTAACCTGTTTTCCTTTGTGTTGGCTGAATGCCATCCTTATAGGTGA--CTTTTTAAAAAGTTCTAATTTTCCTAATTCCAATAAGTTTTTTCTTTATTTACCTTACCAATTTCATAGTCTCTAATAACAGCCCTTTTTCATAATTTATGATTGAAGAGGTCAATTGCAGGTTATTTATCAGGTAAAATAATATAAAAGTCCAGCAACAGCTAATTGATAATTACACATACAGACAGAAACACACACGTACACATGGATGCTAGAATCAAATATTTAACCTTTCAATGTCATGATTATATAAAGATTTTGGTGATGGGGGAAGTACTTCTGTTCTAGTGTTAGGTATAAACAAGACTGACTTTTATATACCAAGAATGAAAAGAAA-ATATATGTACATGTAGAAAAACTCAGGGCTAAATG---AAGGTGAAATCATAAGTGAAGTGGTCG-----ATGTTTATAATTATCTTCTTAT s mm7.chr7 88067979 730 - 141766352 ATCGTCTCTAGATCTGCCCTGTTGAAAAGGAAAAG-------GGGGGCATGAAGTTGCCCATGTCATT-----AAGGGTGATA---TAGAGCTGAGTCTGCTAGTTGAAGTCGTTTGT------GCTG---TATGGCAG---------------------------------------------------------------------------AATGGAAGCTACAGG---------GGCATGC-------------------------AACTCCCACAATCCTCTCCTTTCCTATGCTCACTGTCACGTTCCTTGATGCGA--------TTACTGTGTCATGTG-GCTTCTGGTTCCATTATTGAA--CTTCTCTCTT-------------------------CATTATTGCTTT---CTCTAGTACATTTCT----------------------------------------TAAATTTACTAACAATCATAGATAGTA---------TCTTTAAGATGGATGGATACAGTTCTCAAAGGCTGTGCTTTTTAA---GCTCTTATTTTTCCAATTCTGATG---TTAATCTCTGTTTACACTGCCA-TTTCACAGTCTTGGATAATATCCCTCTTTTACAGTTTGTAGCTGAAGATATTCCTTTCAG-TTAGCGATCCTGTAAGAAACTA--AGAGTTTAAGGATAGCCAGTTGATTTTGAGCTCAGGTGACAGATATACACATA-----ATGTACATTAGGGTTTTAAAGTTAGTTTTTCAAAGTCATAACTGTG---AGATTTTTGTGATGTGGGAGATAGTTCTGATTGAATGTGTAGAAGATATA---------TTTTTATACCAACGGTCAGAGGCAGTAGGTACACACACATAGAAAAACTCCAAATGAAATGTTTCAGATGATATACTAAATGAATAAGACATCATAATGTTTGTATCTCTATTtctat a score=15445 s hg17.chr15_random 759362 563 + 784346 CCTGAATGTGAGACTTTTGTGTTGTGTTCTAGGTCATCTACACACACAAGCCTCTGTGAGTCACTCCATCTTTGGGGAAACCTTCCGTCAAAAGTTGTGGCAACAGAAGATTTCGTATCTTTGATGGACACAGACCTCCCTTCCACTGACATGTATTTTAGTTTCATTCAGAAAATACATACATTGACTCCTCAGTCTGCAATTACCA--TGTGAATTATGTGACCAATTTAACAGCAAAAGGTTAATCTATTTTCACAGAAGGAAGTAGTAAAAGCAAAAATGGATGTTTATGT-TTTGATTCTCACCCTAGGCTAATCAGCGACAT-TCAGTCTTATATAACAAGGAATGAACAATAGCACTACTGTAACCTTGAATTATTATTTGCTCTAAAAATAGAATTATAACATGCACTTGAAGTTGAACGTTTTGTATCTTCATCTTTCATTGTATGTAATTTCATTTATTTTAAATAATGGAAAGAAAAACTAACAAACAGAAGATGGGCTCATTAATAAAATTTAGAATCATCCGTAATT---GGCAAAGGTGGTAGAGAAATGAAAGCA s mm7.chr7 88068874 520 - 141766352 CCTGAAAATGAGAACTG---GTAGTATTTCTGGTCACCCGTACTCATGGCCCTTGGTGACTCACTCCTTCCCTAGGTA--CTGTCCTGCAAAA----CAGTGTCAGAAAATGTCCTCATATTGATGGGCATGCACGTCCATCCTG-----------------TTTATTCAGAGAACTGCTAGATTGGCTATTCAGGCTGGAGTGATCACCTGTGATTAATGTTACCAATTTAACCACA---GACTAATCTATTTTAACAAAAGGAAGTTGTAAAAGCAAAAATGAATGTTTTTGTATTTCATTTGCATCCTATGAGTCTGAACAACATCTCTGCTTAATATAGCAAGCAATAGACAATAGT-------TAGCT---ATTTATTTTCTGCTCTAAAAGTAGGACTATAGAG-------GAAGTCAGATGTTTCATATTTTTA--TTTCATGTTGTGtaattaatttaattttaaataatGGAAAAGAGCA-TAAGAAACAACAAATAAGCTCATTAGTACAATTTAGAATTTTGCCAAATTAGGGACAACTCTGG-AGAGACGTAAAAGCA a score=6746 s hg17.chr15_random 760011 419 + 784346 CTCTGCAGccagggccaggcagcctgggtgattgttattgtcatggctccaccactgagcagctctgcattctaggccccgaattccttaatatccgcacctcacttttcttctttgtaaactgagatggttatagcaccagatctccccgtgctgttagggtgagatgagtcaatgcaggtagaatccctcacaggctgcctggcacaGACATGCCAGCTCTTGTTACCATCATTATTGTAGTTACCAGTGACAGTGGTAGTGCTCGGTGATATTATAATTTGGAAGACTAGGCCTGGATTAAAAAA-TAATAATTAGGGTGTACCAGAAGATTGTTATGATATTACAGGTTCACTTACTATACAGTTTCATATTGGCCCATTACACAATGGTTATAGCCAGGTTCCGGTCAAAATTTG s mm7.chr7 88069896 337 - 141766352 CTCTATAGATGGAGGCCAGCAGCTTGAGA------TCCACTCATGGCTCTGTCACTGAGTAGATCTACATTCTGGGTTCCATAT--------------------------------GGAATAGGATGTGGTATCTGTGGTAGACCTCCATATGCTACTGTGCTGATGGGGGTTAATGGAGCCAGAG-CACTCACACAATGCCTGGCATGGCC---TGAGCATCCATGGCCATCAGCCTTGTGGTT----------------------GGTGAAATCCTAATGAGGAAGACTATATTTGAATTAAAAGGCTAATAATCAGATTGTGCTAGACAATTGCTATTGCAATACAAGTTCCTTT----------------CTGGACCATTAAGCAATGAGAAAAGCAG---TCTGGTAAAGATTTG a score=23053 s hg17.chr15_random 760540 1085 + 784346 AATATATGTGCATTTATTCTACATTTATATTTTTTGAGCTTATAAGCAATTTTAGAAAATGCATGT--TTTCAGTCCCGTCAAGGAAAGCTTTAT-GATAATGCTCAATAAGGGATAGGAAACAAAGAATAAATAACTTTTAAAGGCATCTTAAATTGCTTTACAAGCAGTAA------TATATGTATAGGTACACACCCTAAGCCACCGAAGTGCTGAGTAGATTTGATTTAAGCCTTATTTCTGAATGATATTCACCTACAACACAAACTTACGTAATTTGGTGGGGATAGTTCAGATAATCTCATAAGAGACATTAATTTTTAAAAGTACTTAATAT----GGCTTTCTGGGACACGATGGTGGCTCAGTGAATGGCTAGAGTGAGAGAGTCGTTCAAAGGTCTTCATCTTTTATTTTTCAGCTTGACCATCTCTGCAGAGTGCCCCATGCAGCTTGAGGACTTCCCGATGGATGCGCACGCTTGCCCTCTGAAATTTGGCAGCTGTAAGTTATTTTCACAAG-TAAGAGCCTTGGACATATACTTTGGGGATCAATTCCACATTTATTCAGAAGAATTTAGGT----TCTGCATATACATAAGCACAATAGGATGCAGTCTGTTTAAGAAGCGTGGAGAGTGTATTGT-TCTCCCCAGACTagctttcttgtctgcaaaatggggtcattaacacctgccatacatcacagattaggataaactatgacaatgcCAGTGACATCACTGAACAATCTGGAATGTGCCCCTCTGG---GGGTGTTTCTCCTCAGATCTCAACCGG------------GCAGTTCTTTTTTGTT----------------TTTGCATCTCAGATTACAGGTCACCTGGTCAAAGGTGACCAGTGCCCAGTACTCAGCCAGTG-ATATTTTTTATTGTGCTGTAATCATTGCTGTGTTGACTCACTTCTTCTAGAATGTTCCATAAGAGCAACAGCCTCATCTGTCATGTTCATAGTCAGTGCTCACCCACAACACTCAGCATTTTAGG-----------------------------------AAATATG-----TGCTGCTTGAACAA-----------------------------ATAA-------ACAAATTATTCATATCACAATACTATAGGTATACACTTATACAATTCTAATAGGAATTCCTGGATTCCAGCC s mm7.chr7 88070233 1135 - 141766352 ATTGTACATCTATCTACCTTACATTAATAGTTTTTGAGTAAATAAACTACTTAAGAAATTAAATGTATTTTTAGTCCAGTCAAAGAAAGCATGTTAGACAATGATGAGCAAGGAGTAGGAAGTGTCAATTCACCA--TCGGAAAAGCACCCTAGATGGTGTTATGAGTGATGAGGTGTGTATTTGTATTGGTACACACATCAGGCTACGTGGGTTCTGAGTGCTTTGGAGTCACACCTTTACTCCCAATGATGCTT-CCTCCAGCACAAAC--ATGTAATTTAGTGGGAACAGTT-AGACAATTTCA----AAAAATTATTCATCAAAGGTG--TAATATAAATGGCTTCATGGGAGGAGGAGGTGGGCC------------------------CTTTTAA---CCATCTTCTTTTACTTTTCAGTCTGACAATCTCTGCTGAGTGCCCAATGCAGCTTGAGGACTTTCCAATGGATGCCCATGCCTGTCCCCTGAAATTTGGCAGTTGTAAGTTATTTTCACTTGTTAAGAGCTGTGGGCGTGTTCT---GGGGTCAAATCCACATTTACTCATAA----TTAGGCTCAATCTGCAAGTGCATGTG----ATAGAATATGGTTTGTCT-GGAGACTCTGGGTGTGTATTATCTTTCTTCATGTTATCTGTACCA--TGAGAACTGGTGCTGTGAGCATCCATCATACAT---AGATCAGGGTAAGC--TGGTCATGT--GTGAAGGAACCAAACAGTCCGGAATGTGTACCTCTGATGTGGAAGTGTTTTCTTAAATCTTTGCTAGTATCCCCTCTTAGCAGCTCTTCTTTGCTGAGACCCCTTCTCCGCTGTGTTCTTCATAAATTAGGTTA-------AAAGCCTTCCAGTTTTGAGCATGCAGCCAGTGtttttttttttttttttttttttttttATTGTAGTGCTATACTGACCCTGGTAAGTTC----AGGG----ATCTTAGACTGTCATGTATATGGTCTATACTCACTCAGAAAACTTAA-GTTGTAAGTCAGTTGTGTCTTCACACATGGCCAGCTTACCCTTAACTATGATGGCTGCTCATGGCACAAGGTCTCATGGTGCAGACCACATGAGGAGGATAATTACTTGACTAACTGGTCAAATCAAAATACATTAGGTTCACGCTTCT-CAAATCTTGTGGATATTCCTGGGTTCCAGTC a score=3235 s hg17.chr15_random 761875 126 + 784346 AAGTTTTCACTTTGAAAGCAGAATGTTCTCCTTGAGATGAAGCATGAaaactgtgtgggtttgaatcctggctatcccactcctctgctgagtaactgtgggcaagttaattagactctctgagcc s mm7.chr7 88071636 117 - 141766352 AAGGTTTAATTTTAGAAAAA--------TTTTTGAGATGAAGCTTGAAAGATAGGGGTTATTGAATCTTGGACACCCTACCCCTTGGTCAAGTGCCTG-GGACAGGCTTGCTAAGCTCCCACAGTC a score=16146 s hg17.chr15_random 772092 1148 + 784346 ggcgagttagagatctggggagagatgatgtacatctgtatacatcactgtg-ggcctctcttgtggttcttttccttctaggattttgcacctcactctccagctg--ctgctttaatagttccaggctcttctttaggttcttcaagcaagggagatggaggggtcctatctgagcatcagctgccttgcagcgctgacccacagcttcttaagtgaaaagccattctttcctctaaatggcaactcctgtccatttctgcttgtctttgagtctctccggggctttcagggagtagtttttcatctgacatccagagataatggatgttacctCATAGCAGGCATTCTGCCATTCCTGGATGCAGAAAATGTTTTGATTTCAAGAATTTCATTTTATATTACTTCCATCATTCCAAAGAGATTTTTGGAATTAGAAGAGGAATTA---TAAGTGATGAGCCAAAAGTTAGGTTAGATGGAAATAATTCA---ACTTTTTCAAACTATGATCTTTA-GATATATACAGAGATTAAGATATACATTTATTTGAGGAG-GCCAGTATAATGGAAAGGGACTATCTCTGGGATTTATTTAAATCATTTGCTTCCATGGGGTGGTTGGGGACATCATTACTTAGAACAAAGGACCC-------TCTGAAGATCCCTGAGGCATTTCATTTGGGAATCACTGATTGATGTCTTTGAAAGAAAATTACTTGTTTATATCCTCAGAGGA--AGTGGAGTTGTACAACTTGAAATTATGCCACTCT--GTATATGAAAATTGTGCTTTTGATGTGATCAAAAA-TAAAACACTCTAAGTCAAAGATGATT----------------GTTTTTTTGATCATTGGTTA----AGTTCAAGTCAACGTGATACCCAGATGTAATGCTACTGGTGAGCAGGGCAGGTAGCACAAAAGTAAGTTTTGGTAAAGAAAACTACGTGATGTCCTGATTATTTCC-----TAAATTT---TCATCTTTAACAATGAACCAACTGCAGTTAAATCATTTATCACACTCAAAGCTAAAATACTCATTCAGTGAAAGCTCTTCACTTTCTATATTCAGTCAAATAAAATAAGATTCATATTATATATAAGAAGTAAAACCAATAGAAGTGCTCCTTGAACTCAGTAGGAATTTTGAACTCTTATGTCAAATTTATTT s mm7.chr7 88073705 1064 - 141766352 GGTAAAGTGGAGGTTTGGGGTGA--CCGTGTGCATCTGTAGACATCGCAGTTCTAGCTCCTGTCTGGCACTCTCCCCT-GAAGATTCAGCTCATTCCTTTGTGGCTGTGCTGCGGCGATGGCTC-GGGTTCCTCAGCCGGACCCTGAG----------CGTAAAAATCCTACCTGA--------------------CTTAACCACATCCTCCTTC-TGGGAAGC---TGACACTTCTGAGTATCAACTCTCCTTAGTATCT-----TTTTTTAAT-------GGGGATCCAGATAATAGTT----GTCTGATTTCCA----------------------------CCTTCTGCTGTTCCTGGA---AGGGAGCCTTTCTGACCAAAGGGTTTCATTATGGATTACC-CTATGCTTCCAAAAAGAGGCTTGGTTACAGGAGATAAGTAAGCTTGTATGATGAACAAAACGTTAGGT-GGAAGGAAATCTTTCATTTATTTTCTCAAACTGTTACCTTCAAGGGCTCCAGAGCAATCACATCATTTGTTTCTTAGGGTGGTGGTGGTATAC------GTGACTCTCACCAGTATTTCTTGGCATCACTTGT-------GGGTGGCGGTAAACACCAGTGTTTGTGATGAGGGGGGCCATTGAGTCTGAAG--TCCTCAGGTAGGTCATCTGAGA-CCACTGAGTCCCATGCCTGAAGGAACATGAATTGGTCTCATCTCTGGAACATTAGC-------TATAGTTTAAATTTATGCTGCTCTTTATATATGAAGATTATG-GTTTGATTTGATCAAAAAACAAAACAC--------AAAGACTATTTTTGCCACATTGTGAGGCTGCTCTGGTCACTAGCTAGATGAATTCAGGCCACTGTGAT-CCCAGATTTAATGGCAGTGACGTGCAGGGCAGACAGCTCAAAAGCAATTTTGGATAGAGAAAGGTATTTGACAGCCTAATTTTTTTCGTCACTAAAATTATCTCATACTTGTCAGGCAACCAACTGCAGTGAAATTGCTTCTCACACTCAGAGA-GGCACACATACCTAACGGAGGCTCCTCACTCTCTTCGTC-------ATAGTATGAG-----CACTGCACATAA--AGCGAAGCCAGCAGGGACAATTACTGACCTCAGGAGAAATTTGAGATTGTCATGTCCAATTGCTTT a score=28519 s hg17.chr15_random 773560 1540 + 784346 ATATCTGCCTGCTATTG---AGATTGATATGATTTGCTTCAGAGGTTGATCATTCATTTATATTTACTGTTAATATTATTACTATGAAAAACAATAAGAATGATTTTATTCATATGTCATGTATTGTGTGTAAACTGTTGACCAAGAGCTAGAAAACTGTACACACTTCACCTTTCCTCAGTT-ATATGATTTCAGCTCAGCACATGATAATTCTAAGAGAAGAATTGCTATTCAACAAAGTTTTTTTCTTACTTGTCTTTCATCTTTTAGATTTACTAAAAA-----TAGATGCTTGGCCAACTTGTTCACTTATACCATTG--GCATCTGAGCATGCAGAGGCTAAATGTGATAGTATAATGAGTTTCAAATTACTCAATTCAACAGTTCTCTGCTATTAGGAGACAAAGGAATGC-AATATGTGTCATTATTCTAATGAGCCACATGCTCTAGTTTCTCTAATGCAGAACTGAATTAACAGACATTTCTGTTATTGGTATCTCTACTCTTAAGAATTCCATCAAATCTTGAAATTAGTCTCAGCTTACAAA-AGGATGTTTCTCGGTCCATAAGGAAATTCCTTAAAAATAATGGCATGGTGTCCATTCGGAAGCAAATACTTAAACAC--AACAAGACTATTT----AGGAAAAAAATATATTTAGATTATGTCATTCATTTTATTTGTGGAGTGATTCATTA-----AATATTAAGCCATGAGATGACATCTGGATTCACGAAAATATGTACTAAATTAGAACTGGAAGCTTCTTTGGTAGTCATCCAGTAGAGAGAATTTCAGGAAATGAGGGGTGAATTTCACCGGAGTGAGCTACTATTCCATTC-------AGACACATGAATTATGCCTGCTGTTGCATTCATCATCCCCAGCTTCTAGTGACTCAGGATGAGCGTGGATGATCTAGAACACAGGTTTCTGAGTGCCTCGTGT----GAACATGTTACAGTCTCGACAGTTGTAGAAACATACTGA-AGTTTTAACTGTGCGGTGTCTGAATTTAGATTGTTTCAACAATCACGTTGATGCGTTAGTTACCCTTGGTTGTCACTGGAAtctgaatgtttgtttcctccccaaatcatgtgttgaaacccaatccccagtgtattaagaagtgggg---------cccttacgaggtgattaggacgtgagggtggggggtcctcctgcgtgggattagtgctcctataaaagaggtcccagagagct-ctcccgtcccttctgccatgtgaggaca------------atgagaag-gcaccCAAGCAGACTAAAACAATTACCATCTAAGAGATACTCTGAGTGTtgctttagtctggtttggctgttataacagaatacca------caaactgagggacttaaaaacacca--------------------------------------gaaacttatttctcacagttctggaggctggaaagttttggatcaagttaccaacagtttcagtgtctggtgagggcctgctttctggt----taagacagcatcatctcactgtgccctcacacgatggaaggggtgagtgaattcccaggggcaccttttataagggcattaatcccattcatgagggctcca s mm7.chr7 88074806 1487 - 141766352 AAATGTTCTTGATATTGTGAAGATGGATTTGATTTTATTCCAGTGTTGATCATTTACTCAGTGT--CTGTCAATATCA---CTATGCAAAACA----------------TCACATAACATAT-TTAAATGCAA----TTGACTGAGAGCTAGAAAATTCTGGAAAAATTATTCTTCCTCAGCTCATAAGCTTCACATTCAAAACACATTAATTTTAAGAGAAGAAACGCTATTCAATTAAATGTGTTT-TTATTTGTCTTTTATCTTT-AGATCTGCTAGAAAAATAATAGAGACTTCTCCAACATATGCACTTACACTACTTATGCATATGAGCACGCAGAAGCTAAATGTGCAAGTGTAATGAGTTG-AAATTACCCAATTCAACAGTTCTTTGCTATTAGGAGACAAAAGAATGCAAATGAGTGTCTCTCTTCTGGT--------TTCTCTGGTTT------GGGAGAGCCTAAGTGAGCTAGCCACCTATCATTGCTGCCTCCCCTCTC-------------AGTGTTGAAATTAGTTCTAGCTTGCAGACAGGA--CTTCCTAGACTGTAAAGAATTTACTTAGGGATAATGACATGGCTTGCATCTG-----------TTGCATTCCAAGCCACACTATTTGAAAAAGAGAAAGGAAGGCTCTAATTCTTTTGTTCATTTTATTCTTAGAACAATGCGTTACTTATAAGCTTAAATTATGAGATAATATCTGGAGATTAGAAAAAATTTATTAAGTTACAACTAGAAACTTCATTGGCAG----------------------GGAAATTGGTTGTACATCTCA-TGCTATGAGCTTTCAGTGCATCCCAGGTATGGATACGTGA-----GCCTGTTCTTGTGTGAAGGATACCCAGGTAACAGTGGCTC------------------------CACA-GTTTCAAAATGCCTGGTATATAGGAACA--TCAAAGT-TCATGAGGTGTAGGAACACACTGATGGACACACCTGTGT-GTGTC-AAGTTCAGATTTGTTGAATAATAATGCATACACAGTTGTTAATTTTGGCTTTT-TTGtggtctgaatggttg-tgcctcttttattcatgtctgtaaacttaattattaatgca-taggcgatagtgttaggagcttctttgggaggtgattatatcatgaggac--aaagccttgaggagtaggat---tgctc---------agttactaaagagctcctcttatcctttctgccctatgaggacaTTACAAGAAAATATGAGAAATACTTTTGAAGAGACCAAAATAAACACTTCTTAAAAAATACTTTGTATGTGGCCTTAATTTGTTTAGGATATT-----AGATTATCATTTAGTTATACTG-----TTCATTAACAACATTTATATTTTTTATGTTTATGAACAGGTTACATTTATGAACattcattcctcacatttctggaggttgggaaggtcaaggttcagttgtcatcagaattattatctagatttgtcttgtttcatcttaacccaagactgc--cttttttctataacctcaga--gtagaaagaacaggagacctcgttatagc-tgttttatagtggcacaaatccta-tcttgaggactcTA a score=18964 s hg17.chr15_random 782935 1173 + 784346 ctcagacatggttgctgtttttatcccattctat-gatgaagggactgaggcacagagaataagtgacctgccaaagtcacagagctggagggac-ccaggcactctggtctcagagct---catgttctcacctcctgcaccatCGTGCGCTCTGCAGAGAAACACAAGTGTACCGGGAAGTGC-CAGACAGCAGC----CTGGCAC-CCAGGCCTTTAGACATGGGAAGATGCCGAACTGCAGTGGCGTCTGCCCTGGTCCAACCACCCTATGCATTTTTTAGGTCATGGAACCTTGACTTTTCAAACGTTCTCATCCTCTCTCTTGCTACTTTAGTAAAAGCTTCTGTGTTTTCCAGGCTGGGAATGATTTCATGTTTATGTCACTTTCTGCCCCCTCCTCATACAGATGCGTACCCTAATTCTGAAGTCGTTTACGTCTGGACCAACGGCTCCACCAAGTCGGTGGTGGTGGCGGAAGATGGCTCCAGACTGAACCAGTACCACCTGATGGGGCAGACGGTGGGCACTGAGAACATCAGCACCAGCACAGGTGAGGGCTCGGCACGCGCTGTGCTGCCAGGCGCACTCAGGACACCACACCCTTGGAGAGCTTGCTGCTCCCAGCACCTCTCTGCAGGGGCCACGTGGGAGGCCGCACAGCAGCCTCCCACACAACCTGTCCTGGCCAGCTGTGCTCTCC---------------ATGGGCCACAGCTGTA------TGAGAGCTGGCCAAAG---GAATCCTCCCAGCCTGCCCCTCCCTGCAGCTGCAC-ACAGAGGCACCAGCTGTGGCCGGGGGTTGCGGTGGACCTGCTTATATAACACCC---CCCTAAGCAGGAAAGGTAGACAGCTTCCTACAAATA--------CCCCAGTTACCTGCTTCCCCACCTCCTGCTTTAAACAGTGCAGAGATTTCCCTGGAGTTGAAATTGGGAAAGCACAACCAGGCAGCCTACAGAGAAGAGCTGAAATG-TA-CAAGAAGGAAGCAGATGCTCTCAATGCCA-AGTGCCCTGGGCTGGCCTGAGCCCTGCAGGGCCAATATAGCCCCATCCCAGCCTGGCTTCCCTTGACACAAAGTTGGTGGGGAAACCAAAGAAACAGGATGCATTGCATCTCCAGAGCCTGCAAGTTATGTGGCCAGATGTCTCCAGGACAGGAAGGCCCAGCCATAGAGGTCAAG--GTCACCAGG s mm7.chr7 88101613 1088 - 141766352 CTCAGGTGTGGGTCCAGCAATCAccctattccacagatgaagggactgttatacaga--ataagagacctattaaggtcactgatcagccgggatgacagGCACTT--GTCTCAGAGATGACTATTTTTTTTTTTTTTGAA-----GTG-----TGGAAAGAGA---AAATGTATGAGGATTGGCACAATCTGTGGCACATTTTGTACATCAGTTCTATTGATGTGGGGAGGGTCTGACCCATACAGGT---------------ACTGCCCTACATGCTTTCTAAGCCCTGGAG---------GTCGA---TTCTCAACTTCATCCCT----CTTCCACAAGCATCTTTGTGTTTCCCCAG-TGGAAACCACTCTATATTTACTCCATTTCCT-TTCCCTTCTCATACAGATGCTTACCCTAATTCTGAAGTTGTCTATGTTTGGACCAATGGCTCCACCAAGTCTGTGGTGGTGGCAGAAGATGGCTCCAGGCTCAACCAGTACCACCTCATGGGGCAGACAGTAGGCACTGAGAACATCAGCACCAGCACAGGTAAA-----GATGCCCGACTTGCTGCCTGGGGC-TAAGGGGCATCCCATCC--------CCTGTGGCTCCATGCTCCACTCTGCAGGA---------------GTACAG----ATCTTATGCAA-CTACTTTGGCT-TCTGTAAGCTCCCTTGCAGCTTGACAAAGGGGCACCAGCTGCAGGGACCTGAGAA-TGGAGAGAGCATGGATCTGTAGTGCATG-------TGGCATCTGCACTATACATGTA--GGCCTTGTCTGAAGGTCCAGTT--ATCAGTTTTTATATTTTCCTTTCCCAAACCTAAGAAACAAGGCAGTCTCTGCAAAATGGGGTATGCATCCTGCTGACTGTCCTCTTGTTTCCTTCCCTGAACATCTCAGAGATCCTCTTGAGGTTGAACATGGGAAATCA-AACTA-ATAGTAGACAAAGACTGACTAAGGTGATACCAATGAGGAAGCAGATGCTGTAAATCACACAATACTGT-------------CTCTGTAGGG------------CAGTCTGGATTGGCTTCAGCAGATAAAACATGAATGGTGAGGCCCAAGGCAT---ATATACTCAACCTGCACTACCTTGAAGT----GGGCCACACCTGTCCTGGC---GGAGGGCCAGC---AGGGTTCAAGCTATCACCAGG